Title,PMID,cell_name,Cell_Type,X1,X2,X3,X4,X5,X6,X7,X8,X9,X10,X11,X12,X13,X14,X15,X16,X17,X18,X19,X20,X21,X22,X23,X24,X25,X26,X27,X28,X29,X30,X31,X32,X33,X34,X35,X36,X37,X38,X39,X40,X41,X42,X43,X44,X45,X46,X47,X48,X49,X50,X51,X52,X53,X54,X55,X56,X57,X58,X59,X60,X61,X62,X63,X64,X65,X66,X67,X68,X69,X70,X71,X72,X73,X74,X75,X76,X77,X78,X79,X80,X81,X82,X83,X84,X85,X86,X87,X88,X89,X90,X91,X92,X93,X94,X95,X96,X97,X98,X99,X100,X101,X102,X103,X104,X105,X106,X107,X108,X109,X110,X111,X112,X113,X114,X115,X116,X117,X118,X119,X120,X121,X122,X123,X124,X125,X126,X127,X128,X129,X130,X131,X132,X133,X134,X135,X136,X137,X138,X139,X140,X141,X142,X143,X144,X145,X146,X147,X148,X149,X150,X151,X152,X153,X154,X155,X156,X157,X158,X159,X160,X161,X162,X163,X164,X165,X166,X167,X168,X169,X170,X171,X172,X173,X174,X175,X176,X177,X178,X179,X180,X181,X182,X183,X184,X185,X186,X187,X188,X189,X190,X191,X192,X193,X194,X195,X196,X197,X198,X199,X200
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,B cell_PMID_33208946,B cell,CD79A,MS4A1,TCL1A,CD79B,LINC00926,LTB,BANK1,CD37,VPREB3,RCSD1,FCER2,FCMR,HVCN1,MEF2C,ADAM28,HLA-DOB,BLK,CD19,FCRLA,SELL,IRF8,CD74,CD24,GNG7,IL4R,P2RX5,SPIB,EEF2,CD52,PPAPDC1B,PAX5,ORAI2,LIMD2,CYB561A3,TPD52,PTPRCAP,SNHG7,CD22,CD40,TSPAN13,TXNIP,CCR7,QRSL1,GAS5,SNX2,POU2F2,ZCCHC7,BCL11A,ISG20,KLF2,CLEC2D,HBB,HLA-DRB6,IFT57,CXCR4,GLTSCR2,HHEX,NCF1C,BTG1,SMIM14,LAPTM5,PNISR,EZR,PRKCB,PLEKHF2,TMEM243,EVI2B,MDM4,1-Mar,FAM65B,STK17A,SWAP70,FAM26F,GNB2L1,HLA-DMB,LY86,DRAM2,SP110,DCK,HLA-DQB2,NAPSB,RASGRP2,SYPL1,GABPB1-AS1,FAU,STX7,UCP2,TMEM154,PPM1K,RNASE6,SMDT1,SMARCB1,MBD4,LBH,LSM7,C6orf48,SP100,HLA-DQA1,SEC62,TSTD1,FOXP1,EIF2S3,BIRC3,BIN1,ANAPC16,SEPT6,NPM1,POLD4,LUC7L3,HNRNPA1L2,ARID5B,HLA-DQA2,TCEA1,CHPT1,EIF3E,EIF3D,HLA-DMA,PARP1,ITSN2,ELOVL5,SMCHD1,EIF3F,ZFAS1,PTPN6,ERP29,IL16,HNRNPA1,TRIM38,SNHG5,CORO1A,BLOC1S2,TAF1D,FLJ10038,SNHG3,TBC1D10C,SH3BP5,PNN,PDLIM1,TNFAIP8,HINT1,EIF3L,EIF4B,HMHA1,UBA52,ATP6V1G1,ACAP1,PSMB8-AS1,TRAF3IP3,HLA-DPB1,FAM96A,PPP1CC,CHCHD10,TNRC6B,HLA-DRA,PLAC8,LOC100190986,PABPC1,15-Sep,QARS,HDAC1,SRSF8,C17orf62,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Plasma cell_PMID_33208946,B cell,JCHAIN,IGLL5,MZB1,DERL3,SSR4,HERPUD1,FKBP11,HSP90B1,SEC11C,ITM2C,CD27,XBP1,CD79A,PRDX4,FKBP2,PIM2,SFTPC,PDIA6,MANF,TNFRSF17,DNAJB9,SELM,VIMP,TNFRSF13B,SPCS2,SPCS1,SPCS3,MYDGF,CRELD2,SDC1,GNG7,TXNDC11,SDF2L1,SSR3,KRTCAP2,TXNDC15,CTSH,JSRP1,UBE2J1,NUCB2,POU2AF1,JUN,TMEM59,TMED10,TMED9,FAM46C,ERLEC1,ANKRD36BP2,TPD52,PLA2G2D,RABAC1,PDIA4,RPN2,HSPA5,PPAPDC1B,ISCU,SPAG4,SLAMF7,MEI1,LMAN2,QPCT,TMEM258,PPIB,SEC61B,H1FX,CITED2,TSC22D3,LMAN1,DDOST,TRAM1,CHPF,TP53INP1,SEL1L3,CCDC167,TRIB1,SIK1,PABPC4,CD38,SELK,HM13,SUB1,CD59,BIRC3,DUSP5,HDLBP,ERGIC3,KDELR2,GSTP1,CALR,CFLAR,KIAA0125,FAM3C,SRM,EAF2,TMEM205,ISG20,AMPD1,KDELR1,P4HB,CUTA,EZR,UBC,IL2RG,DNAJC3,RPN1,RASGRP3,TMED2,ATF4,WNT10A,CNPY2,YPEL5,PERP,DNAJB11,ARF4,KLF6,CTHRC1,MANEA,AQP3,TECR,OS9,TMEM156,DANCR,SCNN1B,ARSA,OSTC,CFL2,PDK1,RAB30,ALG5,IFNAR2,DNAJC1,SEL1L,ERP29,TMBIM6,ANKRD28,FCRL5,WBSCR22,PAIP2B,CAV1,SLC38A10,DERL1,SIL1,MIF,SEC62,CCR10,HLA-DOB,VKORC1,HSH2D,DAD1,SERP1,ATRAID,CXorf21,IGF1,GAS6,SEC61A1,HSPA13,TIFA,SRPRB,GORASP2,VOPP1,SSR2,ANKRD37,ICAM2,DNPH1,TM9SF1,TMED4,CHID1,SEC61G,CRIP1,LSR,GMPPB,KCNA3,YIPF3,B4GALT7,LY96,COMMD3,TNFRSF18,LIME1,HSD17B8,SRPR,IFNAR1,ARID5B,CYBA,LOC283710,C16orf74,CERCAM,A1BG,ST6GALNAC4,SLC35B1,WDR45,CLPTM1L,PNOC,B4GALT3,CKAP4,PRDX2,XIST,TMEM208,PELI1,B4GALT1,SEC14L1
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,CD8+ Memory/Effector T_PMID_33208946,T cell,GZMK,CD8A,DUSP2,CCL5,KLRB1,IL32,IL7R,GZMA,TARP,CMC1,CD3E,CD3D,CD8B,FYN,GZMM,LYAR,CST7,PIK3R1,KLRG1,CD2,SPOCK2,SH2D1A,PTPRCAP,CXCR4,LCK,NKG7,ZFP36L2,CLEC2D,PVRIG,CTSW,CD27,ETS1,GZMH,SYTL3,PRF1,LIME1,GIMAP4,PRDM1,RUNX3,CD3G,GPR171,PARP8,CNOT6L,HCST,CD7,BTG1,GIMAP7,SH2D2A,RARRES3,BCL11B,SLC38A1,IFITM1,PTPRC,SYNE2,SAMD3,TRAT1,DNAJB1,PBXIP1,S1PR4,ISG20,IKZF3,LEPROTL1,PCED1B-AS1,TOB1,ARL4C,CD6,CDC42SE2,MATK,PRKCH,MALAT1,EML4,STK17A,HLA-F,GCC2,ACAP1,AKNA,HLA-A,TBC1D10C,CLEC2B,AIM1,ITM2A,SNHG6,TXNIP,AAK1,C9orf142,GIMAP1,HLA-B,HLA-C,HLA-E,TERF2IP,CD48,AES,SUN2,BIN2,APMAP,IL2RG,TUBA4A,CD247,SMCHD1,ICAM3,EMB,PIK3IP1,RASAL3,PIP4K2A,SEPT1,APOBEC3G,ARHGEF1,IL16,KIAA1551,CHST12,TOMM7,GLTSCR2,KLRD1,SARAF,RNF166,ARHGAP15,HMHA1,TAGAP,SNRPD2,CORO1A,LAT,GUK1,CNN2,JUNB,GTF3A,TMA7,SEPT7,BUB3,PDCD4,GAS5,CCND3,GYPC,FCMR,VAMP2,IL10RA,CD99,LIMD2,SIGIRR,C12orf75,SSR2,KMT2E,ANKRD12,CALM1,IRF1,CREM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,CD8+ Naive T_PMID_33208946,T cell,GZMH,CCL5,NKG7,CD3D,GNLY,CD8A,CMC1,IL32,CD8B,GZMA,CST7,TARP,CD3E,KLRC2,CTSW,KLRD1,GZMM,GZMB,KLRG1,PRF1,IFITM1,PTPRCAP,FGFBP2,CD3G,HCST,CD2,KLRF1,LCK,LYAR,TIGIT,CD7,C12orf75,LIME1,PRDM1,RUNX3,KLRB1,ETS1,FYN,HOPX,PVRIG,SAMD3,CD99,RARRES3,ISG20,DUSP2,SPOCK2,AES,SYNE2,APOBEC3G,ZFP36L2,C9orf142,MATK,CHST12,CLEC2D,SH2D2A,SYTL3,HLA-C,HLA-A,IL2RG,ANXA6,PRKCH,PARP8,HLA-B,PTPRC,APMAP,BIN2,STK17A,GIMAP7,PIP4K2A,ITGB2,AKNA,ACAP1,ZAP70,TUBA4A,EVL,TBC1D10C,ARPC5L,PIK3R1,CD247,CASP8,GIMAP4,GNG2,MALAT1,SUN2,ABHD17A,RASAL3,CXCR4,CCND3,IFITM2,CNOT6L,SLC38A1,ARL4C,LAT,HLA-E,TMA7,MYO1F,CORO1A,SLC9A3R1,PCED1B-AS1,SEPT1,EMB,CALM1,S1PR4,ICAM3,PPP2R5C,KIAA1551,GIMAP1,HLA-F,ARHGEF1,GTF3A,SEPT7,RAC2,CDC42SE2,BTN3A2,SYTL1,ARHGAP30,VAMP2,RNF213,SSBP4,PPP1R18,TPST2,PBXIP1,PIK3IP1,IL7R,GUK1,CDC42SE1,PTP4A2,HMOX2,WIPF1,TAP1,BIN1,CD52,CLEC2B,TXNIP,CYTIP,BTG1,RNF167,CAPN2,TSC22D4,BUB3,MBP,SNRPD2,IL10RA,LOC100190986,UCP2,PSMB9,TAF7,CCDC107,KLF2,RAP1B,CD53,PFN1,HMHA1,C12orf57,ABI3,FNBP1,MYO1G,RNF166,PPP1CA,DOK2,RABAC1,DHRS7,ADGRE5,PPDPF,MYL12A,SIGIRR,EZR,LSP1,DDIT4,CELF2,TMEM173,IKZF1,STOM,HSPA8,,,,,,,,,,,,,,,,,,,,,,,,,,
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,CD4+ Memory/Effector T_PMID_33208946,T cell,IL32,CD2,CD3D,CD40LG,CD3E,IL7R,CXCR4,ZFP36L2,CXCR6,PRDM1,CD6,TRAT1,GPR171,PHLDA1,SPOCK2,LTB,CD52,LCK,TMEM173,SIT1,PBXIP1,PTGER4,ITM2A,PLP2,GZMA,BTG1,LEPROTL1,CXCR3,LIME1,ACAP1,PTPRCAP,CITED2,TSC22D3,IL2RG,CCDC167,CD3G,KLRB1,EVL,APOBEC3G,BATF,CD99,TUBA4A,AIM1,OCIAD2,PIK3IP1,RBPJ,SEPT1,RGS1,FYB,CLEC2D,CD96,EML4,TOB1,LAT,RHOH,ARID5B,ITGB1,CORO1A,RARRES3,FAM129A,KLF6,STK17A,SARAF,GSTK1,BCL11B,RGCC,IFITM1,NR3C1,ZC3HAV1,HOPX,SYNE2,TXNIP,PTPRC,ARHGAP15,EMB,ETS1,RASAL3,GIMAP7,CD69,ANKRD12,CCNH,TTC39C,KIAA1551,ZFP36,TAGAP,PRKCQ-AS1,LDHB,MZT2A,ANXA6,HLA-A,ARHGEF1,CCL5,MYL12A,PRDX2,FNBP1,AAK1,S100A4,CCDC107,FKBP11,EZR,ICAM3,CYTIP,TRAF3IP3,CORO1B,LDHA,RHOF,SEPT6,HMOX2,SKAP1,PDLIM2,LOC100190986,PIK3R1,TRADD,CDC42SE2,WIPF1,AMICA1,SIGIRR,PCED1B-AS1,TNFAIP3,DDIT4,ACTN4,ABRACL,PDCD4,JUNB,SLC38A1,SOCS1,ARHGDIB,MIF,CAPZB,ARL6IP5,YWHAQ,MYL12B,TBC1D10C,GIMAP4,SEPT9,HNRNPUL1,SOD1,STK17B,C12orf57,HINT1,IKZF1,STOM,HLA-B,MALAT1,DDX24,MYH9,BUB3,TAP1,TNRC6B,SH3BGRL3,SUN2,HMHA1,GPR183,JUN,ALOX5AP,CRIP1,APBB1IP,CD48,FXYD5,ARF6,TMEM123,APRT,MEAF6,HSPA8,GCC2,HCST,ID2,CAPN2,SYTL1,PSME1,TAPBP,RABAC1,CMTM7,DHRS7,CNN2,CALM1,UBC,S1PR4,GNG2,XIST,N4BP2L2,ARHGDIA,SSR2,SP100,SEPT7,TERF2IP,VAMP2,IDH2,IL10RA,EPC1,RNF167,CIB1,EVI2A,HLA-F,LINC00152,,,,,
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,CD4+ Naive T_PMID_33208946,T cell,LTB,PRKCQ-AS1,CCR7,LEF1,LDHB,GAS5,MAL,NOSIP,HBB,IL7R,PIK3IP1,PCED1B-AS1,CD3E,TCF7,MYC,SELL,LINC00861,NPM1,GIMAP7,CD3D,GLTSCR2,CD27,BCL11B,FLT3LG,LRRC75A-AS1,SNHG5,EIF3E,EEF2,FHIT,C6orf48,TRAT1,TMEM123,LDLRAP1,IFITM1,CD3G,AES,GIMAP1,GIMAP4,TOB1,CLEC2D,IL32,ACAP1,NDFIP1,LCK,TXK,PIM1,PABPC1,TOMM7,SNHG6,FYB,HNRNPA1,SARAF,FCMR,LIME1,CD6,SPOCK2,STMN3,EVL,GNB2L1,RCAN3,TRAF3IP3,EIF4B,C12orf57,LEPROTL1,ITK,AAK1,ETS1,EIF3L,EIF3H,PIM2,CCDC109B,NACA2,HINT1,TTC39C,GIMAP2,SNHG3,TPT1,TXNIP,LIMD2,RSL1D1,SMDT1,EIF2S3,HMHA1,OCIAD2,TNFSF8,FBL,PSIP1,ARHGAP15,CD48,LBH,HSPA8,SEPT6,TAGAP,FOXP1,BTF3,COMMD6,SEPT1,FAM65B,SNHG7,TNRC6B,ARID5B,CD2,PRDX2,SLFN5,PBXIP1,KLF2,BIN1,SNHG8,ADD3,PNISR,NACA,MYLIP,HNRNPA1L2,ZC3HAV1,UBA52,EIF3F,CMPK1,DANCR,EIF4A2,SNRPD2,SRSF5,BTG1,ST13,ATM,LAT,UQCRB,MZT2A,VAMP2,TPR,SRSF8,COX7C,WHSC1L1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Natural Killer T_PMID_33208946,T cell,ZNF683,KLRC2,XCL1,CCL5,KLRC1,CTSW,GNLY,KRT86,XCL2,HOPX,KLRC3,KRT81,CD7,KLRD1,GZMH,CXCR4,APOBEC3G,ITGB1,ZFP36L2,C12orf75,FCRL6,GZMB,CD2,CD8A,GPR171,PTPRCAP,IL2RB,BTG1,HCST,CST7,TUBA4A,PHLDA1,PRF1,LCK,TSC22D3,NKG7,IFITM1,STK17A,CD99,RBPJ,EMB,DUSP2,MATK,CHST12,TXNIP,ID2,EVL,PARP8,IL32,IL2RG,RARRES3,ACAP1,IL10RA,LSP1,LIME1,HLA-A,PIK3R1,SLC7A5P2,CYTIP,ITGB7,CD3E,BATF,SEPT7,PTGER4,CORO1A,SUN2,SOCS1,PRDM1,GLIPR1,C9orf89,MYL12A,PTPRC,CD52,PLP2,ANXA6,SYNE2,CLEC2D,CLEC2B,CD247,CCDC167,RASAL3,LGALS1,CD3D,OPTN,MBP,ITGB2,IL7R,SEPT1,HLA-B,RABAC1,GCC2,DHRS7,SH2D2A,HLA-C,N4BP2L2,PPP1R12A,TERF2IP,CITED2,ITGA4,XIST,OCIAD2,PIK3IP1,CD53,NR3C1,TBC1D10C,VAMP2,TMX4,STOM,C9orf142,RAC2,RGS1,LINC00152,ARL6IP5,DSTN,BUB3,WIPF1,SLC9A3R1,MEAF6,CLK1,KIAA1551,IFITM2,ETS1,ARF6,TSC22D4,RNF166,HMGB2,MALAT1,LOC100190986,UBC,TAGAP,FYN,ARHGAP30,FNBP1,PBXIP1,SYTL3,ACTN4,MPHOSPH8,CDK2AP2,PSMB9,SLA,TPST2,GZMM,DAD1,DDX5,IDH2,RGCC,TBCB,ANKRD12,HLA-E,LEPROTL1,SIGIRR,TAP1,MYO1F,BIN2,GUK1,RSRC2,CFLAR,ZFP36,SNRPB,SKP1,YWHAQ,HLA-F,PNISR,CDC42SE2,DOK2,SH3BGRL3,PAIP2,PRMT2,POLR3GL,ATRX,TSTD1,IKZF1,MYL12B,ARHGEF1,CLU,CD69,SP100,NCOR1,PRPF38B,PRDX2,ICAM3,KLRB1,KLF6,SOD1,SRSF2,ADGRE5,PPDPF,EVI2A,SAMSN1,IK,PNN,PSME1,S100A4,TAPBP,MYH9,CAP1,LCP1,HMGB1,APMAP,TRAF3IP3
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Natural Killer_PMID_33208946,NK cell,FGFBP2,GNLY,NKG7,PRF1,SPON2,CLIC3,GZMB,KLRF1,CD247,KLRB1,CD7,KLRD1,MYOM2,CST7,CTSW,IFITM1,GZMA,CMC1,HOPX,FCGR3A,S1PR5,GZMM,IGFBP7,GZMH,LOC100130872,PLAC8,CHST2,TTC38,TXK,ADGRG1,TMIGD2,LOC374443,APMAP,MATK,RARRES3,SH2D2A,BIN2,SYTL3,ITGB2,CCND3,PRSS23,DUSP2,IL2RB,SH2D1B,C1orf21,NCR3,ABHD17A,CHST12,DDIT4,AKR1C3,TBX21,AES,CCL5,PYHIN1,KLRC1,YPEL1,PRKCH,ID2,ZAP70,PTPRCAP,HSH2D,MAPK1,TXNIP,CX3CR1,ISG20,KLRC3,JAK1,RAP1B,AKNA,FYN,IFITM2,PTGDR,SAMD3,SYNE2,ABI3,PTPN4,RUNX3,GIMAP7,ARL4C,HLA-E,EFHD2,IRF1,FCRL6,GPATCH8,LPCAT1,SUN2,AOAH,DENND2D,MBP,TPST2,ETS1,GNG2,AREG,TMEM2,PRMT2,TBC1D10C,C5orf56,IL2RG,PVRIG,IER2,HLA-C,SIPA1,RAC2,LITAF,C9orf142,SYTL1,PTGER2,HCST,LBH,PIK3IP1,UBE2F,PPP1R18,HLA-A,RNF166,RASSF1,CYTIP,LIMD2,SCGB3A1,C12orf75,MALAT1,LOC100996255,PIP4K2A,SCGB1A1,YPEL3,SLC9A3R1,GPR65,LYAR,EVL,ICAM2,PRPF38B,CDC42SE1,HLA-B,CELF2,SELPLG,CALM1,MYO1F,LY6E,CD99,SIGIRR,RHOC,CNOT6L,EIF3G,HLA-F,ARPC5L,CFLAR,AAK1,RPA2,DOK2,RNF126,CLEC2B,RNF213,SFTPC,TCF25,HDDC2,BTG1,HMOX2,ARHGEF1,GYPC,SLC38A1,C1orf56,RBM39,DHRS7,VAMP2,IKZF1,CCDC69,PLEK,PCED1B-AS1,FCMR,SEPT7,POLR3GL,CD53,PFN1,TSC22D4,GIMAP1,HMGN3,SLA,FLJ10038,BIN1,TRAF3IP3,GIMAP4,CD164,CD47,CYTH1,PPP1CA,ARGLU1,IDI1,BTG2,KLF2,APOBEC3G,FKBP11,PSMB10,PSME1,IFI16,IQGAP2,ARID5A,PRDM1,SRSF11,ARHGAP30,PNRC1,STK17A
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Proliferating NK/T_PMID_33208946,T cell,STMN1,HMGB2,HIST1H4C,MKI67,KIAA0101,TUBA1B,TYMS,BIRC5,PCNA,SMC4,CKS1B,NUSAP1,HMGN2,CENPF,UBE2C,ASPM,H2AFZ,TOP2A,HMGB1,H2AFV,RRM2,CKS2,GZMA,DEK,PTTG1,TK1,DUT,NUCB2,NUCKS1,H2AFX,CALM3,CARHSP1,ARL6IP1,AURKB,MCM7,DNAJC9,ASF1B,TMEM106C,GNLY,CDT1,ZWINT,IDH2,SMC2,ANP32B,ANP32E,TPX2,CDK1,CDKN2C,KLRF1,CDKN3,CLSPN,CENPM,SPON2,CENPA,UBE2T,USP1,NKG7,CDCA5,KIF22,HIST1H1D,ATAD2,DDX39A,SKA2,FGFBP2,RALY,SAE1,PTMA,MAD2L1,CKAP2L,SAC3D1,MZT2B,GZMB,KIFC1,EZH2,HMMR,CDKN2D,SMC3,GTSE1,C12orf75,SYNE2,UBB,SLBP,KLRD1,HMGN1,HOPX,H1FX,MXD3,IFI16,EBP,PRF1,SPC25,TMPO,CD247,CCNA2,FEN1,PSIP1,SNRPB,CCDC34,CENPU,UBE2S,CDC25B,CDC20,RPA3,IGFBP7,DLGAP5,RANBP1,BUB3,NUF2,LIG1,TACC3,CCNB2,MAD2L2,UHRF1,E2F1,CENPK,DTYMK,DNMT1,KIF20B,RAD21,CD7,COX8A,MCM3,SIVA1,CDCA8,LOC100506844,FAM64A,GGH,FAM111A,LSM4,CTSW,TCF19,C9orf142,LYAR,CENPN,YEATS4,PRC1,RRM1,DHFR,BANF1,KPNA2,HIRIP3,RAC2,KIF15,FAM111B,CENPE,PFN1,CENPH,RAN,ANKRD36C,IFITM1,KIF23,PHF19,PKMYT1,SET,MZT2A,HIST1H1C,PSMC3,MYOM2,LOC374443,CDCA4,NCR3,SLC25A5,YWHAQ,XCL2,SRSF10,CDCA3,SGOL2,RAD51AP1,HNRNPA2B1,ITGB1BP1,HNRNPR,CCDC167,KIF2C,TROAP,NDC80,ACTG1,CD99,HP1BP3,CEP55,RACGAP1,CALM1,RNF167,DCTN3,NASP,WDR76,YPEL1,NUDT1,SRSF3,NCAPH2,HSPB11,CMC1,HNRNPF,HN1,KIF11,AURKA,PRR11,CENPW,CDK2AP2,ITGAE,RHEB
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Basophil/Mast 1_PMID_33208946,Mast cell,TPSB2,TPSAB1,CPA3,MS4A2,HPGDS,VWA5A,LTC4S,SLC18A2,GATA2,CLU,RGS13,KIT,JUN,MAOB,HPGD,LAPTM4A,C1orf186,RGS2,RGS1,CD69,CD9,FOS,SAMSN1,IL1RL1,SDPR,HDC,TDRD3,CALB2,IER2,SIGLEC17P,PTGS1,TUBA1A,LOC284454,CD63,FCER1A,EGR1,CPM,CTNNBL1,PEBP1,ANXA1,CAPG,RAB27B,PPP1R15A,BATF,LMO4,AREG,LXN,BACE2,CNRIP1,NTM,PRDX6,RENBP,SLC26A2,MLPH,VIM,ARHGAP18,SMYD3,TIMP3,SLC45A3,NDUFA4,ITM2C,SEPT2,SLC44A1,PLIN2,H3F3B,C5orf30,CTTNBP2,MSRA,HSP90AB1,SOCS1,STMN1,ALOX5AP,STXBP6,LMNA,FOSB,BEX4,SNHG8,ACSL4,BTG2,CD44,GLUL,PROCR,RHBDD2,ALDH1A1,PLGRKT,RALB,PTMA,TSC22D3,CKLF,CRBN,NFKBIA,SCGB1A1,FAM212A,CD82,TNFSF10,BTK,PMP22,DUSP1,PKIG,NDST2,ALOX5,ADRB2,FOXP1,PHF20,EIF4A2,LAT2,STX3,GMPR,GRAP2,ACOT7,FAM46A,ASRGL1,SCGB3A1,BIRC3,LPCAT2,TESPA1,TSC22D1,LYL1,ASAH1,NFKBIZ,CHN2,RAC2,AKAP13,NSMCE1,GNPTAB,PRKAR1A,SQSTM1,JUNB,BHLHE40,CNIH1,AP2M1,CATSPER1,RAB32,DDAH2,ATP6V1F,RGS10,TMEM176B,RAB34,ARL2,SWAP70,CD59,ACER3,SMIM3,MYADM,EIF3E,ANXA4,IDI1,RHOH,DUSP10,HMGN1,C10orf128,ARHGEF6,VMP1,ANXA7,CYSTM1,RNF130,MORF4L1,ESD,MBOAT7,SFTPC,EIF3D,DYNLL1,MAGED2,LAT,ITM2A,IL18,CAST,BST2,OSBPL8,SRGN,DAD1,CHPT1,DNAJC19,ZFP36,CLIC1,EXOSC8,UBB,MAPRE1,SPINT2,CNBP,CIRBP,CSDE1,FLOT1,FXYD5,DBI,DNAJC9,PRKX,TCEAL4,RSL24D1,CCNI,RTFDC1,MPP1,BNIP3L,SNX5,PRDX1,EPB41L4A-AS1,PRNP,ZBTB20,ARHGDIB,SYTL3
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Basophil/Mast 2_PMID_33208946,Mast cell,LMNA,TPSAB1,TPSB2,CPA3,MS4A2,TSC22D1,BIRC3,NFKBIA,LOC101927482,HPGDS,GADD45B,CCL4L1,CSF1,RGS13,SELK,CD69,IL1RL1,RGS2,ANXA1,HPGD,VWA5A,CPM,HDC,TNFRSF9,GLUL,GPR65,CREM,AREG,ID2,PLIN2,NR4A1,C1orf186,FOSB,CLU,LAPTM4A,GATA2,SLC18A2,SDCBP,RGS1,PTGS2,CD83,KIT,SRGN,LTC4S,LEO1,TUBA1A,SYAP1,CD9,LMO4,SIGLEC17P,NR4A3,MAOB,SAMSN1,BHLHE40,TNFAIP3,KDM6B,MYADM,FDX1,CALB2,REL,SDPR,NFKBIZ,SLC2A3,METTL21A,BRE-AS1,DUSP6,SOCS3,TIMP3,LOC284454,SLC45A3,ELL2,H3F3B,CKLF,DUSP10,SGK1,ELF1,SLC26A2,FCER1A,RHOH,SOCS1,ICAM1,FTH1,BATF,RASGEF1B,ACSL4,DDIT4,RAB27B,JUND,ZNF331,PLAUR,SKIL,PRDX6,RHBDD2,PPP1R15A,SQSTM1,TPM4,ACOT7,PTGS1,EGR3,STXBP6,RENBP,FTH1P3,AHR,ALG13,RNF145,BACE2,CAPG,DDX3X,CSRNP1,MITF,MAPK6,NDUFA4,CNRIP1,VIM,B4GALT5,PRKAR1A,NDEL1,NTM,CD63,NFE2L2,PRNP,FAM46A,AP1S3,PEBP1,GALC,GNA15,CAMLG,NFKB1,EHD1,BTK,MLPH,MCL1,JUNB,ARHGEF6,SRSF7,GABPB1,CTNNBL1,SRSF5,ENPP3,DDX5,SRSF3,PPAP2A,NR4A2,RBM39,HIF1A,VPS37B,ABHD17B,FAM107B,HNRNPH1,ITM2C,HSP90AB1,MORF4L2,ZFP36,TPM1,VMP1,TGIF1,GCSAML,FER,NFKB2,MIR4435-2HG,VEGFA,UBB,GMPR,SEPT2,AP3S1,STK17B,TSPYL1,CPEB4,ALOX5,PNPLA8,PALLD,DHRS9,MSRA,STX3,DDAH2,BCL2A1,ITM2A,STMN1,BTN2A2,LAT2,DNAJA1,CLCN3,SLC44A1,TSPAN4,BZW1,PDCD4,SMYD3,P2RX1,PAK1,VAPA,PRKX,BEX4,PTMA,TDRD3,SBDS,PAG1,ARHGAP18,SVIP,ANKRD28,PLK3
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Macrophage_PMID_33208946,Macrophage,FABP4,APOC1,CCL20,C1QB,MARCO,C1QA,MCEMP1,C1QC,ALDH2,FABP5,LGALS3,FBP1,VSIG4,FN1,ACP5,FTL,IFI27,CES1,GRN,SERPING1,CTSD,GCHFR,MSR1,SERPINA1,CD68,APOE,CCL18,RETN,OLR1,CXCL5,MT2A,S100A11,LGALS3BP,MT1X,MGST3,IFI30,ANXA2,CXCL3,CYP27A1,TREM1,IFI6,LPL,CSTB,MRC1,CRIP1,NUPR1,RGCC,ANXA5,CTSC,TSPO,GSTO1,SNX10,MT1G,PDLIM1,FTH1,HP,HSPB1,GPNMB,GLIPR2,CTSL,HLA-DRA,LTA4H,ALOX5AP,HLA-DRB1,CD9,STXBP2,TXN,RBP4,MS4A7,LOC731424,PHLDA3,S100A10,HLA-DRB5,S100A13,CTSZ,FCGRT,MS4A4A,PRDX1,TNFAIP6,CAPG,PCOLCE2,INHBA,CD81,PLBD1,MT1E,CXCL16,CTSB,IL1B,COMT,S100A6,LYZ,CFD,LY6E,SPI1,GLRX,FCER1G,CXCL8,NOP10,LRPAP1,DEFB1,VMO1,HLA-DRB6,PNPLA6,AKR1C3,TYROBP,LAMP2,HEXB,CD63,BRI3,CD74,MYL6,ALOX5,TUBA1B,PPARG,RMDN3,PTMS,MGST1,RAC1,HLA-DQB1,SCD,HNMT,IGSF6,PTPMT1,PSAP,CD52,GPD1,PSMA6,GLUL,BHLHE41,AQP3,CYB5A,CD151,ATP6V1F,HLA-DMA,TREM2,SLC11A1,GRINA,GPX4,ATP6V0B,PLD3,PLA2G16,DYNLL1,RTN4,ATP6V0D1,RAB13,APIP,TFRC,GSN,HSP90AA1,ABCG1,VAMP8,UBB,OASL,CYBB,FCGR1A,PPIC,ATP6V0C,ASAH1,MT1F,SNX2,CSTA,CD59,IGFBP2,LAMP1,PSMA7,SDCBP,HLA-DPA1,PYCARD,FHL1,ALDH1A1,CORO1C,PGD,SDC4,HEXA,DECR1,LIPA,BCAP31,VIM,SOD2,SLC7A7,TMSB4X,HLA-DQA1,PLAUR,PLIN2,MDH1,CTSH,LOC101929371,TUBA1C,YWHAH,CYBA,S100A4,ITGB8,TGM2,GPCPD1,SMCO4,HCK,MT1L,BLVRA,SQRDL,ATP5G3
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Proliferating Macrophage_PMID_33208946,Macrophage,FABP4,TUBA1B,MARCO,H2AFZ,C1QB,STMN1,APOC1,C1QA,GRN,FN1,C1QC,UBE2C,VSIG4,CES1,KIAA0101,ALDH2,LGALS3,HMGN2,HP,CCL18,PTTG1,CCL20,FABP5,SERPING1,TK1,SERPINA1,LGALS3BP,FBP1,ARL6IP1,CDK1,MCEMP1,TYMS,MGST1,PCNA,ACP5,CTSD,MS4A4A,CKS2,MGST3,CKS1B,CTSC,TREM1,RETN,IFI6,TUBA1C,PDLIM1,RBP4,NUSAP1,CD68,HIST1H4C,GSTO1,FTL,CYP27A1,APOE,SNX10,CXCL3,LRPAP1,ANXA2,GCHFR,GPNMB,CENPW,HEXB,TOP2A,GGH,HMGB1,LYZ,RHEB,KPNA2,CD59,ANXA5,HLA-DRA,RRM2,IFI27,LPL,MT1G,CDKN3,CTSL,HLA-DRB1,CENPF,HN1,S100A11,CXCL5,CRIP1,LOC731424,BIRC5,PLBD1,TSPO,MS4A7,MT2A,TMEM106C,PTMS,UBB,CTSZ,DUT,HLA-DRB5,HSP90AA1,HMGB2,IFI30,AKR1C3,IL1B,MT1X,MKI67,CCNB2,NUPR1,MDH1,H2AFV,TXN,HMGB3,RAB13,S100A10,ALOX5AP,HMMR,LAMP2,CCNB1,UBE2S,PLD3,DTYMK,CTSB,OLR1,DEFB1,SCCPDH,VPS29,LTA4H,TNFAIP6,DEK,STXBP2,SAC3D1,YWHAH,VIM,GPX4,CSTB,CENPM,CYB5A,RAN,TAGLN2,HSPB1,CAPG,CSTA,NUCKS1,HLA-DRB6,PHLDA3,GLA,MNDA,TKT,IGFBP2,AP2S1,RAC1,CD74,CD151,FCGRT,PSAP,MT1E,MSR1,HNMT,PSMA6,VMO1,MCM7,RPA3,CXCL16,RAD51AP1,ZWINT,INHBA,SMC4,C2,BLVRA,CTSH,LSM4,CALM2,CXCL10,LGALS1,CCL23,FAM111A,ANP32B,CD63,PRC1,SMC2,APIP,CD81,BTG3,HEXA,NENF,APLP2,MAD2L1,STRA13,CLTA,HADH,FHL1,HLA-DMA,TPX2,S100A13,YBX1,CFD,ATP6V0B,LY6E,PTPMT1,CNIH4,MT1F,SPI1,ALOX5,COMT
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Plasmacytoid Dendritic_PMID_33208946,Dendritic cell,IRF7,GZMB,PLD4,PPP1R14B,LILRA4,IRF8,PTGDS,SERPINF1,TSPAN13,CLIC3,ITM2C,CLN8,SCT,CXCR3,TCF4,PLAC8,NAPSB,C12orf75,UGCG,PTPRS,TCL1A,LRRC26,CCDC50,GPR183,IL3RA,SEC61B,SPIB,PTCRA,IRF4,TPM2,MAP1A,APP,SMPD3,LILRB4,DERL3,BCL11A,TRAF4,HERPUD1,SOX4,CYB561A3,CLEC4C,OPN3,RNASE6,DNASE1L3,GAS6,RASD1,LAMP5,RNASET2,FUT7,MZB1,MYBL2,MPEG1,C12orf45,PRMT9,PLP2,LINC00996,VIMP,C9orf142,NPC2,SLC7A5P2,IGFLR1,P2RY14,PHB,PPP1R14A,SPCS1,SLC15A4,UCP2,FAM129C,IRF2BP2,GAPT,CD4,SELL,PARK7,AREG,SIDT1,GPX1,HSP90B1,SLC7A5,PTPRE,HIGD1A,TGFBI,B4GALT1,SMIM5,LIME1,UNC93B1,PROC,SEL1L3,CNPY3,CD74,ST6GALNAC4,ERP29,OFD1,ATG101,SPINT2,CBX6,TNFRSF21,MAPKAPK2,HINT1,MAN2B1,ALOX5AP,CD164,ZNF706,SMIM3,PPIB,CORO1C,PPM1K,TXN,RAB11FIP1,VEGFB,NUCB2,LTB,SHD,PFKFB2,FUZ,SEC61G,VAMP8,AMICA1,YPEL5,SRP14,GNG7,NR3C1,ABHD15,DCK,RRBP1,CDKN2D,TRABD,MEF2C,GNA15,KCNK17,REPIN1,ZFAT,BLNK,IDH3A,ERCC1,FKBP2,SNRNP25,MIF4GD,THEMIS2,RUNX2,CSF2RB,CD2AP,LOC642361,DUSP5,SIK1,A1BG,PLEK,CHAF1A,EIF2AK4,SIVA1,SCAMP5,MS4A6A,ARL4C,PRKCB,PACSIN1,DBI,SNHG5,SPNS3,COMMD6,ST14,MGST2,ANKRD11,DSTN,SELPLG,PHEX,CAT,TSPYL2,CDK2AP2,OSTC,USF2,HIST1H2BK,SNHG7,UBE2J1,ATP13A2,FAM213A,NCF1C,SULF2,IFNAR2,AEBP1,C16orf93,DNAJC4,BAG1,BID,MXD4,OGT,CCDC186,ITGAE,APEX1,MAP3K2,TMEM141,TIMM13,BCL7A,FCHSD2,TSEN34,RNF130,BCL2L11,ASIP,SSR4,CERS6,PAIP1,MDFIC
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Myeloid Dendritic Type 1_PMID_33208946,Dendritic cell,WFDC21P,CCL17,CCL22,C15orf48,G0S2,HLA-DPB1,HLA-DPA1,HLA-DQB1,HLA-DQA1,IDO1,S100B,TXN,CST3,LGALS2,CCR7,CSF2RA,HLA-DQA2,NAPSB,CD74,CPVL,C1orf54,CD83,GSN,HLA-DRA,HLA-DRB1,MARCKSL1,DUSP4,FSCN1,HLA-DRB5,LAMP3,BASP1,CXCL8,IL4I1,HLA-DQB2,IRF8,PPA1,HLA-DRB6,GPR183,MT1X,SERPINB9,DNASE1L3,SYNGR2,CLEC9A,IL1R2,EBI3,AREG,CDKN1A,BIRC3,SNX3,RGCC,SERPINF1,CXCL16,REL,VMO1,HLA-DMA,CD1E,LSP1,CD40,RAMP1,DUSP5,S100A10,AXL,DAPP1,CD1C,GPR137B,MAP3K13,VIM,ADAM19,RALA,CD86,SGK1,WDFY4,SERPINB1,RNASE6,SPINT2,ACTG1,CLEC10A,CLIC2,TYMP,RGS10,PPT1,PMAIP1,NFKB1,RAB11FIP1,CPNE3,KYNU,PKIB,MIR155HG,MTHFD2,CTSH,BCL2A1,FCER1A,TRAF1,KLF4,CRIP1,ZFAS1,PTMS,TMSB10,PVRL2,HLA-DMB,DBI,CFLAR,TIMP1,ADAM8,NDRG2,NR4A3,PLEK,GABARAPL2,YWHAH,NAAA,REPIN1,ALCAM,CMTM6,SPI1,BID,PEA15,TAP1,LDHA,MS4A6A,ATF5,FILIP1L,MARCKS,KLF6,ANXA2,LGALS1,HLA-DOB,TBC1D8,ATF4,CADM1,PNMA1,CTSZ,ENTPD1,PIM3,TAGLN2,LAP3,GSTP1,HMGA1,ST3GAL5,RASSF4,NUB1,SOD2,CST7,RFTN1,OGFRL1,IL13RA1,GPX4,CRIP2,MCOLN2,NET1,GRINA,PLEKHO1,SHTN1,ENO1,NEAT1,RAB32,GNA15,PTPN1,VAC14,NAP1L1,VOPP1,SERPINF2,FNBP1,RNH1,SLAMF7,GNG5,TMSB4X,BATF3,ETS2,NINJ1,ALDH2,CD80,RHOF,ETV6,TNIP2,RELB,ACTN1,FLT3,RAC1,CD58,WARS,IL1B,COTL1,ENSA,PTPRE,PNRC1,IGFLR1,ASAP1,VDAC1,NDUFV2,HAVCR2,PSME2,PKM,C12orf45,ATF3,IER3,SNHG5,TSPAN33,P2RY6,GAS6,HCK
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Myeloid Dendritic Type 2_PMID_33208946,Dendritic cell,FCER1A,CD1C,CLEC10A,HLA-DPB1,HLA-DQA1,HLA-DQB1,HLA-DPA1,HLA-DRB6,CST3,HLA-DRA,HLA-DRB1,HLA-DRB5,CD1E,CD74,HLA-DQB2,CPVL,MS4A6A,HLA-DMB,HLA-DQA2,NAPSB,LGALS2,HLA-DMA,GSN,FCGR2B,YWHAH,RNASE6,GPR183,WFDC21P,CEBPD,SGK1,AXL,CSF2RA,AMICA1,LYZ,PKIB,CTSH,NDRG2,FGL2,SPINT2,IL1R2,CD86,C1orf162,LSP1,SERPINF1,COTL1,FILIP1L,LY86,GPX1,FAM26F,ETS2,S100A10,MNDA,SPI1,PLD4,TGFBI,H2AFY,PPA1,CD1D,NLRP3,AP1S2,GDI2,PLAUR,KLF4,C15orf48,BASP1,IL13RA1,HLA-DOA,PEA15,SLC25A5,ENTPD1,PLSCR1,CXCL16,FPR3,CFP,CSF1R,RGS10,CLEC4A,TMSB10,PPT1,ZNF385A,TNFSF13B,LAP3,GSTP1,PRCP,GGTA1P,FCGR2A,AIF1,PLEKHO1,HMGA1,ARPC1B,SNHG5,DBI,MEF2C,PAK1,IFI30,SYNGR2,B3GNT5,CTSZ,RAB31,GABARAP,FCGRT,GPAT3,MAN2B1,ANXA2,IGFLR1,TYMP,FAM49B,C1orf54,ACTG1,EIF3L,P2RY13,TMEM14C,ARF5,INSIG1,HBEGF,KCNK6,RAB32,RNH1,C10orf128,VIM,AP2S1,NPC2,SLC25A6,IL18,GLIPR1,RGCC,CLEC7A,CLIC2,LGALS9,ADAM28,GRN,GAS6,IGSF6,PGLS,PLXDC2,RALA,CACNA2D3,THEMIS2,PTPRE,RNF130,IFNGR1,SLC16A3,LGALS1,AREG,DPYSL2,RTN1,ATG3,FAM105A,PYCARD,HAVCR2,TAGLN2,CCDC88A,MGST2,CD4,C12orf45,CCR6,PON2,ST14,CHMP1B,SEMA4A,C20orf27,1-Mar,OPN3,ALCAM,SLC25A3,MAT2A,PVRL2,CKLF,NR4A3,TMEM176B,ADAM8,AHR,KCTD12,P2RY14,SAMHD1,GNAI2,MBOAT7,CXorf21,LOC101927069,TWF2,SLAMF8,TPI1,ALDH2,LOC102724297,RBPJ,RAC1,COX5A,LILRB4,PTAFR,PSME2,PABPC1,LRRC75A-AS1,CAT,LAMTOR2,SRGAP2B,APEX1,LILRB3,UBE2E2,LIMS1,MRC1
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,IGSF21+ Dendritic_PMID_33208946,Dendritic cell,SEPP1,RNASE1,FOLR2,CCL2,CCL13,SLC40A1,C1QC,F13A1,MRC1,LGMN,STAB1,C1QA,CD14,MS4A6A,SLCO2B1,PDK4,HMOX1,HLA-DQA1,CD163,HLA-DPA1,HLA-DRB1,HLA-DRA,GGTA1P,FCGR2A,MAFB,DAB2,HLA-DQB1,IER3,MS4A4A,CXCL2,HLA-DPB1,TMEM176B,HLA-DRB5,CXCL3,MS4A7,CD74,HLA-DMA,C1QB,HLA-DRB6,EGR1,HLA-DQA2,CXCL8,A2M,CSF1R,CFD,KCTD12,CTSZ,GPR34,CTSC,CEBPD,HLA-DMB,NPC2,CST3,PLTP,GPX1,FCGRT,ITM2B,TGFBI,FCGR2B,AIF1,TMEM176A,CTSB,PLD3,RNASE6,LILRB5,BLVRB,MFSD1,GAS6,FPR3,RBPJ,MARCKS,MAF,KLF6,CD93,PMP22,C3AR1,FOS,GSN,ZFP36L1,RAB31,SLC1A3,HLA-DOA,FGL2,IGSF21,ADAP2,LTC4S,HLA-DQB2,PTMS,ARHGAP18,FILIP1L,MSR1,RGS10,PLAU,ETS2,HSPA1A,CPM,CD81,CREG1,GPR183,NEAT1,RHOB,CD4,TSPAN4,LY96,CLEC7A,DUSP6,TYROBP,TNFRSF1A,AXL,KLF4,SPRED1,CLEC10A,HSPB1,AP2A2,CTSL,TIMP2,TSPAN15,FTL,VSIG4,THBD,ITPR2,ZFHX3,CLTC,DPYSL2,IL13RA1,GPX3,YWHAH,LPAR6,SGK1,SLAMF8,CREB5,GPR155,FCHO2,MCL1,GLUL,MEF2C,ALCAM,C2,MAN1A1,NCF4,EPHX1,GNAQ,FRMD4B,TBXAS1,AHNAK,CCR1,CD59,WLS,MGST2,TNFSF12,JUND,TPT1,RGS1,GNAS,FUCA1,QKI,FOSB,TMEM14C,CXCL16,C5AR1,SH2B3,TBC1D14,TLR2,VMO1,RAC1,AP1B1,PLEKHO2,CSF2RA,AKR1B1,PTPRE,NINJ1,TM6SF1,CD68,DUSP1,RB1,RALGDS,RNF130,CEBPB,MAT2A,PSAP,MCOLN1,SERPINF1,PICALM,FAM105A,DDAH2,CCL18,BST2,RBM47,MEF2A,HNMT,SNX9,C1orf162,PPT1,SERPING1,KLF9,SEC14L1,CREBL2,FKBP5,ICAM1,VAMP8
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,EREG+ Dendritic_PMID_33208946,Dendritic cell,CXCL8,G0S2,MT2A,IER3,THBS1,IL1B,TIMP1,CXCL2,PLAUR,CXCL3,EMP1,EREG,CTSB,FN1,RAB31,C15orf48,CTSL,NAMPT,THBD,HLA-DQB1,CD163,CD14,FCGR2A,CD93,C5AR1,CLEC10A,AREG,GPR183,PPIF,HLA-DQA2,HLA-DPB1,YWHAH,GPX1,MRC1,HBEGF,TGFBI,FPR1,MT1X,SAT1,CEBPD,MXD1,CD300E,MS4A6A,ETS2,HLA-DRB1,SGK1,HLA-DRA,OLR1,HLA-DPA1,FPR3,UPP1,ZFP36L1,CEBPB,VEGFA,OSM,CLEC5A,NPC2,CHMP1B,HLA-DQA1,ACSL1,ATP13A3,DSE,MMP19,YBX3,C1orf162,CST3,VCAN,SOD2,LYZ,HIF1A,MAFB,RNASE6,CCL2,TLR2,METRNL,FCGR2B,TYMP,HLA-DMB,HLA-DRB5,CDKN1A,CSF2RA,IFNGR2,MAP2K1,HMOX1,CLEC7A,HLA-DMA,S100A10,SOCS3,GK,SERPINB9,MPHOSPH6,LITAF,ATP6V1B2,NEAT1,PLSCR1,F13A1,PHLDA2,RNASE1,IL13RA1,CD74,MCL1,PVRL2,SLC43A2,HLA-DRB6,ATP1B3,TNFRSF1A,RILPL2,LGALS1,NLRP3,CTSZ,FCER1G,LIMS1,CD86,CPVL,FCAR,SDC2,SRGN,IVNS1ABP,CLEC4E,RGCC,TREM1,RGS2,LILRB2,MAT2A,PDE4B,IFI30,LCP2,TPM4,CREM,PICALM,FCER1A,SLC25A37,FTH1,B3GNT5,POMP,CTSH,GNA15,CCL20,RAC1,RNF149,C3AR1,ICAM1,CD4,ATP5E,SLC16A3,CMTM6,RBM47,AP2S1,PNRC1,SLC2A3,FGD4,JARID2,SCO2,ADGRE2,NR4A2,GSN,PNP,ARHGAP18,TOP1,CSF1R,TMSB10,PTPN1,PEA15,PSAP,ALCAM,PTPRE,USP53,PID1,PLAU,RNF19B,GGTA1P,FCN1,S100A11,FCGRT,LINC00152,AIF1,IL1RAP,PFKFB3,ACTR2,LY96,PRMT9,INSIG1,ARL4C,GLUL,TYROBP,EPB41L3,APLP2,SLC11A1,KCTD12,SH3BP5,KYNU,ANPEP,TNFAIP3,NINJ1,DDX21,HCLS1,TFRC,CXCL16,SMIM3,PMP22
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,TREM2+ Dendritic_PMID_33208946,Dendritic cell,APOE,CCL18,CHIT1,CHI3L1,APOC1,GPNMB,LIPA,FN1,NUPR1,ACP5,IFI27,C1QB,FBP1,TREM2,PLD3,CTSD,CTSZ,CTSB,C1QC,MMP9,HLA-DQA1,C1QA,LILRB4,CYP27A1,CAPG,GRN,CSTB,TMEM176B,PRDX1,LGMN,CD68,LYZ,HLA-DMB,HLA-DRA,TXN,FTL,C15orf48,PSAP,IFI30,CTSK,ALDH2,GSN,ANXA2,CTSH,CXCL9,HLA-DRB1,GPX3,HLA-DMA,CD74,LGALS3,BRI3,HLA-DQB1,HLA-DRB5,IGSF6,CD9,TYMP,FTH1,HLA-DPA1,S100A11,HLA-DRB6,UBD,HEXB,HLA-DPB1,CTSS,CD63,LTA4H,A2M,SERPING1,CD81,SCPEP1,RARRES1,PLA2G7,MARCO,VSIG4,HSPB1,FABP5,LAMP2,ALDH1A1,S100A10,GM2A,GCHFR,C2,CYBB,ATOX1,RGCC,SNX10,RNASE1,TMEM176A,GPX4,AKR1B1,ATP6V1F,LAMP1,GPX1,NPC2,CFD,GSTO1,TALDO1,TSPO,DBI,SERPINF1,TFRC,SLAMF8,CTSC,CPM,PILRA,AKR1A1,CRIP1,FCGRT,CD59,MGST3,CREG1,ASAH1,MS4A7,PLBD1,RNH1,SPI1,MRC1,DAB2,MSR1,CXCL16,NR1H3,SLC15A3,LAP3,ANXA5,VIM,FABP3,HLA-DQA2,YWHAH,LGALS9,PKM,RAB13,TCN2,ACP2,CTSL,SPARC,PSME2,KCNMA1,DNASE2,MS4A6A,CHCHD10,CPVL,BCAP31,FDX1,FUOM,HSD11B1,MS4A4A,RHOB,PLXDC2,ENG,LGALS3BP,SLC7A7,OLR1,TGFBI,PDXK,MAN2B1,NCF2,SLC31A2,ATP6V0B,RETN,CD14,TNFSF13B,RAB20,GLA,ATF3,TYROBP,LGALS1,IL4I1,PTMS,SGK1,FCGR1A,PPT1,FPR3,ADAMDEC1,AXL,AVPI1,PDLIM1,MGAT1,IFI6,CYB5A,C3AR1,CECR1,MDH1,ATP6V0C,HLA-DQB2,ACOT7,LY96,STAT1,SQRDL,GLIPR2,APLP2,VAMP8,RAC1,SQSTM1,NPL,CORO1C,SERPINA1,TSPAN4,BLVRB,CST3,PTAFR
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Classical Monocyte_PMID_33208946,Monocyte,S100A8,S100A9,S100A12,VCAN,LYZ,MNDA,FCN1,CSTA,THBS1,CTSS,CD14,AP1S2,TKT,TNFSF13B,FGL2,GCA,CFP,LGALS2,NUP214,MS4A6A,CLEC4E,CD36,TYMP,AIF1,MPEG1,FPR1,CYBB,RBP7,CYP1B1,C14orf2,TYROBP,CLEC7A,CD300E,CDA,MEGF9,LST1,CSF3R,NEAT1,CPVL,NAMPT,PLBD1,GABARAP,APLP2,PGD,NCF2,BLVRB,C10orf54,IRS2,KCTD12,CEBPD,GPX1,LRRK2,COTL1,TRAPPC5,METTL9,GSTP1,SNHG5,S100A6,LILRA5,RNF130,STXBP2,CLEC12A,CD93,SELL,SERPINB1,AGTRAP,SLC11A1,RNASE6,TLR4,FGR,CLEC4A,NAIP,TALDO1,CD55,H3F3AP4,RAB31,LAMTOR4,TSPO,VNN2,MGST1,SOCS3,IRAK3,LTA4H,PGLS,SLC7A7,CD163,CD1D,1-Mar,PHC2,APOBEC3A,ATP5E,SERP1,EVI2B,LY86,ZFAND5,CFD,LGALS1,ITGAM,ACSL1,CCNY,AP2S1,LY96,SLC2A3,TCEB2,DAZAP2,C4orf48,PYCARD,AMICA1,MXD1,MAFB,UBE2D1,NCF1C,NDUFB1,MCL1,CCR1,FYB,SERPINA1,IFI30,UBE2R2,PTEN,CARD16,MEF2C,AQP9,S100A4,CNPY3,TMEM167A,C19orf38,RASSF2,SCPEP1,SAT1,SULT1A1,ATP5I,FBXL5,GLIPR1,NUDT16,FAM65B,FAM45A,EVI2A,CST3,MSRB1,CRTAP,QKI,CEBPB,GNAQ,CHP1,ATP6V1B2,PLSCR1,PTPRE,SPTLC2,CECR1,RASSF3,TGFBI,ZEB2,C5AR1,EIF3M,DPYD,POLR2L,RGS2,C1orf162,CSGALNACT2,H2AFY,HMGB2,GLRX,TLR2,PFDN5,PSAP,ATP5G2,TPP1,LILRB3,HNMT,BACH1,FOS,POLE4,CASP1,SMAP2,ODF3B,RTN3,FES,BNIP3L,FAM26F,LSM6,FAM120A,RNF144B,OAZ1,CYBA,ATP5D,LRP1,ACTR2,IQGAP1,SSH2,RNF149,FKBP1A,LCP1,SPI1,PCBP1,TIMP2,CAPNS1,SPG21,MIDN,HSBP1
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,OLR1+ Classical Monocyte_PMID_33208946,Monocyte,SOD2,TIMP1,C15orf48,IL1RN,IL1B,G0S2,CCL2,MARCKS,NAMPT,CTSL,CXCL8,AQP9,S100A9,TNIP3,IER3,BCL2A1,ACSL1,CCL4L1,ATP13A3,THBS1,PPIF,S100A8,HIF1A,CD300E,VCAN,CD163,CD93,GK,SERPINB9,CCL20,IFNGR2,SAT1,SLC43A2,EMP1,SLC39A8,FCN1,NINJ1,UPP1,SLC25A37,OLR1,WTAP,CXCL2,TNIP1,TNFRSF1B,S100A12,RIN2,CLEC4E,LINC00152,CD44,SRGN,APOBEC3A,TLR2,TNFAIP3,LOC731424,CEBPB,PLAUR,MXD1,FPR1,TNFAIP6,SPHK1,RNF19B,PFKFB3,ETS2,VEGFA,DSE,NFKB1,MIR4435-2HG,FTH1,EREG,PNRC1,MMP19,BACH1,ANPEP,TREM1,GRINA,RAB31,FPR2,KYNU,TYMP,IVNS1ABP,EHD1,TNFSF8,LITAF,LCP2,MCEMP1,C5AR1,NLRP3,LYZ,ADAM19,FCER1G,LINC01272,CD14,PTGS2,TPM4,MAP3K8,SLC2A3,MT2A,LILRB2,ANXA5,PLEK,MARCKSL1,HMOX1,CXCL3,RBM47,PIK3AP1,PNP,CLEC5A,NFKBIA,CTSB,HMGA1,ATP2B1,SLC11A1,JARID2,C1orf122,GBP1,ZAK,GPR84,PTAFR,EIF1B,LHFPL2,ATP6V1B2,GNA15,YBX3,VASP,CCL3,FCAR,PLSCR1,HCK,CCR1,RNF144B,SEC61G,S100A10,GADD45B,SLC7A5,SDC2,BID,SERPINB1,PIM3,ICAM1,CSTA,RAC1,LIMS1,KDM6B,C3AR1,FCGR2A,ISG15,DRAM1,TMEM167A,DMXL2,AGFG1,INSIG1,SIRPA,IRAK3,PTPN1,POMP,CCRL2,SOCS3,PRELID1,GSTO1,TNFAIP2,SERPINA1,FNDC3B,ITGA5,CKAP4,FTH1P3,IRAK2,RUNX1,ARFGAP3,ZFP36L1,SPAG9,SAMSN1,PSMA6,EFHD2,SLAMF1,SLC16A3,APLP2,THBD,CEP170,CHMP4B,MPP1,LINC00936,GLIPR2,LILRA5,LY96,MAFB,PVRL2,RILPL2,ATP1B3,ACSL4,CTSS,YWHAZ,B3GNT5,PTPN12,ACTN1,BAZ1A,MCL1,ADGRE2,TNFRSF1A,FLNA,CD55
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Nonclassical Monocyte_PMID_33208946,Monocyte,LST1,LYPD2,FCGR3A,LINC01272,IFITM3,AIF1,COTL1,LILRB2,FCN1,CFP,IFITM2,FAM26F,CTSS,SAT1,CFD,LRRC25,LILRA5,MS4A7,RHOB,C10orf54,MAFB,FCER1G,SERPINA1,IFI30,LYN,RHOC,PSAP,LILRA1,PILRA,SPI1,PECAM1,ZFAND5,STXBP2,CSF1R,NAP1L1,FGL2,RNASET2,APOBEC3A,HES4,FGR,TKT,HCK,CDKN1C,NAAA,CEBPB,ABI3,C19orf38,C5AR1,SLC7A7,VNN1,POU2F2,OAS1,WARS,TNFRSF1B,TNFSF13B,TYMP,CEBPD,TCF7L2,SIGLEC10,TYROBP,RAB24,CNIH4,VAMP5,TIMP1,CARD16,CLEC12A,PRELID1,PTPN6,LYST,CLEC7A,MAPKAPK3,HSBP1,RNF144B,CST3,NEAT1,PYCARD,GPBAR1,FKBP1A,MPEG1,CASP1,MTSS1,BID,DUSP1,CD86,BCL2A1,ATP6V0C,NUDT16,ASAH1,LILRB1,BRI3,TESC,NCF2,LILRB3,EVI2B,CMTM6,LILRA2,TBC1D8,TPPP3,RNF149,CSTA,HN1,CAMK1,CD68,LGALS9,ARL4A,FPR2,TBXAS1,CD48,SCIMP,RGS19,PAG1,CYTIP,SLC25A6,S100A4,CYBB,CPPED1,FAM110A,ARPC3,CUX1,DRAP1,SNX18,ADGRE2,C1orf162,CD300A,PGLS,RHOG,CORO1A,C20orf27,SLC31A2,LY6E,OAZ1,PTP4A3,NPC2,SLC11A1,UNC119,AP1S2,GMFG,P2RY13,TCIRG1,ATG3,SPN,THEMIS2,ABRACL,VMP1,MARCKSL1,CDA,CD300LF,RABGAP1L,CD55,SMAP2,PLAC8,GABARAP,ARPC1B,HMOX1,ARRB2,STX11,POLD4,PRAM1,CALM2,ADRBK1,VASP,TNFSF10,FTL,NAMPT,SLC2A6,S100A11,LIMD2,ICAM2,DUSP6,FAM49A,KLF4,MYO1G,GDI2,MIS18BP1,FAM65B,ADA,SERP1,PIK3AP1,PGK1,BLOC1S1,GNAI2,WSB1,ISG15,UQCRB,CHST15,HK3,FAM45A,ZNF706,LRRK2,NADK,SH3BGRL,HIGD2A,INSIG1,RGS18,NACA,CALML4,SECTM1,LAMTOR4,ARPC5,UNC93B1
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Intermediate Monocyte_PMID_33208946,Monocyte,IFITM3,APOBEC3A,LST1,FCN1,LILRB2,COTL1,LINC01272,SAT1,CD300E,THBS1,IL1B,CEBPD,NAMPT,LILRA5,VCAN,CFP,SOCS3,FGR,PRELID1,AIF1,PLAC8,ADGRE2,FAM26F,PSAP,CTSS,C1orf162,MPEG1,IFI30,CD14,RHOB,TIMP1,THBD,FGL2,CEBPB,CSTA,FPR1,C5AR1,CFD,VAMP5,FPR2,MAFB,CST3,CLEC4E,TYMP,TBXAS1,MT2A,LILRA1,TNFSF13B,FAM65B,C10orf54,CPVL,HCK,CLEC7A,CD55,HSBP1,NEAT1,RNF149,ZFP36L1,GPBAR1,NPC2,FCER1G,RNASET2,FKBP5,WARS,CARD16,CTSB,CD300A,LRRC25,FAM49A,CD52,TYROBP,SLC7A7,IFITM2,ATP5E,1-Mar,DUSP6,SLC11A1,PTEN,CNIH4,TNFRSF1B,HES4,ABI3,CD163,SMAP2,DDX21,SERPINA1,NUDT16,PTPRE,LILRB1,SERPINB9,CDKN1A,KLF4,MS4A6A,CYBB,LILRB3,GABARAP,DUSP1,CECR1,FKBP1A,MEF2C,FOS,IGSF6,CD36,TRIB1,ARL4A,TBC1D8,SPI1,RAB24,CSF1R,SCIMP,LIMS1,SMCO4,NCF2,TLR4,LYZ,C19orf38,FAM45A,BACH1,SLA,DICER1,PHC2,LYN,NAAA,CD93,ACSL1,GNG5,MYD88,CMTM6,PAG1,SECTM1,BCL2A1,ATP6V0C,IRAK3,SERP1,GCA,CAMK1,RNASE6,VNN1,KCTD12,HRH2,FTL,IFNGR2,LYST,C4orf3,ETS2,TNFRSF1A,CAPNS1,GRINA,STX11,TMEM167A,RILPL2,EREG,FCGRT,FCGR2A,STXBP2,POU2F2,CCR1,TMSB10,MTSS1,FCGR1B,FCGR3A,LILRA2,FYB,AP1S2,MIDN,PIM1,RGS19,PID1,SLC25A6,CASP1,IER5,RNF144B,PIM3,HLA-DQA2,TTYH3,ASGR1,C20orf27,SCO2,RXRA,ITGA4,CPPED1,PILRA,ZNF706,HBEGF,RHOA,NUP214,ERGIC1,MAT2A,PGLS,ZEB2,EIF3A,MFSD1,ZNF331,S100A8,TLR2,BRI3,METRNL,MXD1,CD48,HIGD2A
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,B cell_PMID_33208946,B cell,IGHM,FCRL1,MS4A1,LINC00926,BANK1,TNFRSF13C,PAX5,PCDH9,CD19,TCL1A,FCRL2,FCRLA,FCER2,IGLC3,CD79A,RALGPS2,VPREB3,COL19A1,IGHD,LARGE2,POU2AF1,SNX22,LINC02397,EBF1,ADAM28,CD22,USP6NL,AC120193.1,IGHG3,CD24,BLNK,BLK,RASGRP3,RAB30,TLR10,CD79B,CLEC17A,AFF3,HLA-DOB1,TSPAN13,SIPA1L3,HVCN1,FAM129C,OSBPL10,CXCR5,BACH2,COBLL1,SWAP70,P2RX5,STAP1,CD72,CNR2,IGKC,CDCA7L,GNG7,PLPP5,BTLA,SPIB,IGLC2,SETBP1,TSPAN33,IRF8,CYB561A3,CD40,FCGR2B,AC270286.1,TPD52,STRBP,HDAC9,SLC9A7,GGA2,PKIG,ARHGAP24,SEMA4B,FCRL3,TCF4,SEL1L3,BCL11A,HIP1R,HHEX,ZNF318,WDFY4,PLEKHF2,TAPT1,HLA-DOA1,TP53INP1,DAPP1,FGD2,ITPR1,TBC1D9,CIITA,SYPL1,CPNE5,IFT57,CD74,1-Mar,EAF2,BTK,MEF2C,TCF3,NCOA3,TRAF5,RUBCNL,POLD4,QRSL1,SYVN1,NUAK2,SREBF2,PARP15,GUCD1,PLCG2,ZCCHC7,AMFR,LY86,WASHC4,SMC6,CHD7,IL4R,TRAK1,PRKCE,CXXC5,ST6GAL1,BACE2,RNF141,ADAM19,NUP88,SP140,ADK,SLC2A1,FCMR,AL031733.2,L3MBTL3,GRK3,IL24,SCIMP,TSPAN3,CCDC50,SNX2,SMIM14,NBPF11,EBLN3P,TTN,HLA-DPB11,ARHGAP17,IRF4,HLA-DQB11,STX7,CHPT1,DNAJC10,USF3,PDLIM1,FAM117B,ZNF107,CD37,FCHSD2,TMEM156,PHKB,RIPOR1,HLA-DMA1,SNX29,BIRC3,ATP2A3,PRKCB,SCAF4,SESN1,CAMK1D,IFNGR2,MGAT5,DMXL1,DIP2B,HECTD4,NFX1,MTSS1,BCAS4,MAP3K1,APPL1,TMEM131,NAPSB,PDE7A,C1GALT1,UVRAG,LBH,DRAM2,ATF7IP,KIAA0040,SNAP23,TBC1D1,HLA-DRB31,MBD4,PPP1R16B,AHSA2P,RABEP1,RBM38,VAV3,ARID5B,SP140L,TBC1D5,PCIF1,RABEP2,SPPL2B
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Plasma_PMID_33208946,B cell,IGLV9-49,IGHG1,IGKV3D-20,JCHAIN,ALDH1L1,ZP3,MAJIN,CLGN,IGLC2,IGKC,KDELR3,MZB1,PLA2G2D,LINC02227,LINC01055,SPAG6,SDC1,CLTCL1,AC234301.3,PCAT19,LINC02362,IGKJ4,NONOP2,IGKJ3,PRSS16,AL109755.1,APOBEC3B,ANKRD36BP2,NUGGC,SMPDL3B,OSR2,CTHRC1,IGLV6-57,TTC41P,YIPF2,NRN1,AC117490.2,IGHA1,CRB3,CIB2,ARHGEF25,TNFRSF13B,TTLL7,EYA2,RAPGEF3,AC005083.1,IGHV3-301,AP002852.1,AC005220.1,CA1,SYCP3,SSSCA1-AS1,JSRP1,GMPPB,TNFRSF17,RECQL4,VWC2,AL627422.2,IGLV3-1,FOXN3-AS1,WNT10A,GLDC,UGGT2,POU6F2,AC004477.3,CECR7,ETV7,SIRT4,BMP6,AMPD1,FICD,IGKJ5,SLC38A5,POU6F2-AS2,MIR581,AC107068.1,CMBL,IL17D,NRSN2-AS1,AC018521.5,CFAP53,DDO,CTSH,AP001784.1,AC106782.4,STXBP4,HESX1,IGKV3-20,LINC02384,ARG2,ENTPD3-AS1,PDIA6,NDFIP2,Z94057.1,AC018695.6,AC007569.1,AC016065.2,AC233755.1,PSAT1,MAL,PHGDH,IGLL5,HID1,FAM114A1,AC122688.3,AC104332.1,AL445189.2,SEC11C,AMER1,SCNN1B,PYCR1,UBXN10,ZNF345,GSTM4,ACSF2,HSP90B1,CBSL,IGKV3D-11,IGF1,PSEN2,FKBP11,IGHA11,AC007285.1,LINC00888,CXorf21,AL592429.2,CLECL1,AL354696.2,EPB41L4B,AC073073.1,GPR146,AC006557.5,IGHV3-30,AL139246.2,CD38,MYL2,DXO1,RNF123,ABCB9,NFKBIE,SSR4,MAGEB17,AP001122.1,MIR320E,ARL5B,TPM3P9,HERPUD1,GOLGA6L91,COLGALT2,ZNF70,SPINK2,NT5DC3,FAM171A1,LINC00426,CD79A,GTF2E1,POU2AF1,ANO7L1,ZNF41,BIK,AC007216.3,GNG7,GRAMD1C,RHEBL1,DNAL1,PSMG1,DANCR,ZNF682,BORA,TBC1D27P,SPIN2B,DNAJB5-DT,RNU4ATAC,RAB40B,SIK1B,SLC1A4,LINC00862,XBP1,RNU5A-1,ITM2C,AL158801.1,LRRC8C-DT,MAP2K7,PRRC1,MEI1,TMEM37,AC036176.1,ZNF532,COX18,PDIA3P1,MANF,AC097347.1,NUDT9,PRDX4,EAF2,BCKDK,KDELR1,SEC22A,STAP2,SSR3
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,CD8+ Memory/Effector T_PMID_33208946,T cell,GZMK,CD8A,SH2D1A,CMC1,CD8B,GOLGA8B,EOMES,TC2N,KLF12,KLRG1,SLAMF7,TMEM109,CCND2,IL7R,AP2B1,TMED2,CLDND1,STOM,A2M,PDCD4,PYHIN1,GBP5,SAMD3,STAT4,OPTN,RORA,PRDM1,HNRNPH2,RBL2,SYNE2,PAN3,SVIP,SPOCK2,C6orf62,CD8B2,CLEC2D,SASH3,ACTR10,PRKCH,KLHDC2,TRGC2,LINC01871,MAP4K1,INPP4B,CD84,OFD1,ELP2,GIMAP1,ARL6IP1,TRAC,STAT1,IKZF3,TRAM1,PARP15,SMARCA5,IL32,CDC42SE2,LYAR,DNAJB1,PARP8,AC099560.2,FYN,GIMAP4,TAGAP,CNTRL,SLFN5,COPB1,PTPN4,SH2D2A,ATP5MD,MIAT,FUBP1,LINC00861,DUSP2,SNHG6,IL10RA,SYNE1,ARHGAP25,CD164,SEPT1,APMAP,CD96,HNRNPF,DDX5,SLC38A1,PBXIP1,TSEN54,OST4,PZP,C9orf78,TMEM230,FERMT3,AL627402.1,KTN1,P4HB,BCL11B,AC002075.2,AL138785.1,C19orf53,EIF4G2,GAS5,DGUOK,PIM1,TRAPPC2,MFNG,STK17A,TRAPPC1,RASAL3,DYNC1I2,NOP58,CD2,BIN1,IK,HERPUD2,TCEA1,TSTD1,ARHGAP15,APOBEC3G,AL590556.1,LCK,ANKRD36C,EPB41,PRDX2,HUWE1,S1PR1,CAP1,SNX17,MYCBP2,ITGA4,SARAF,DPP7,ICAM3,SMU1,HCST,CAPN2,SRSF6,SNRNP200,CNN2,AC106872.2,TPR,LDB1,ARHGEF3,MAT2B,CDS2,RASSF5,RSL1D1,ATRX,DENND2D,ANXA6,CD3D,UQCR10,GZMA,ZAP70,GNAI3,SKAP1,PCED1B-AS1,CNBP,C11orf58,RHOH,SBNO1,SERINC1,PAXX,GCC2,CCNL2,ATP5ME,NDUFS5,WDR1,RUBCN,NDUFA4,SSR1,TRAF3IP3,SRSF7,CD69,CD48,GHITM,AC090498.1,COX6C,TRBC21,MTND2P28,SRSF5,PSMB10,DDX6,DNAJC8,PAPOLA,AL592114.1,ZRANB2,YWHAQ,TMEM14B,TMC6,PIP4K2A,LCP1,HNRNPDL,AC107032.1,RASSF1,ATP5MG,NOP53,PLEK,ANKRD10,CAPZA1,AC092155.2
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,CD8+ Naive T_PMID_33208946,T cell,EFNA5,AC003976.2,TRBV4-1,TTC16,CD3G,TRGC2,AL365475.1,SLC14A1,CX3CR1,SBK1,PZP,CD3D,ADGRG1,CCL5,LGR6,GZMH,TBX21,AC007406.5,IKZF2,S1PR5,A2MP1,CD8A,PIP4K2A,PTGDR,LINC01871,KLRG1,MATK,SPON2,PRSS23,FCRL6,KLRD1,PRR5,EOMES,TTC38,PRF1,SLC35F6,GAB3,C1orf21,ADGRG5,NIPAL3,NKG7,CRTAM,TRBC21,MIAT,BTN3A2,TGFBR3,HLA-F,PPP2R5C,SLA2,PILRB,SAR1A,TRG-AS1,GPR65,PYHIN1,FBXW5,SH2D2A,GZMM,TMEM181,RAP2B,PLEKHG3,CEP78,UBE2E3,A2M,AC005912.1,PRDM1,LINC00869,FBXO32,KLRK1,ABHD17A,ADRB2,LINC01138,ARL4C,TSPAN32,TIGIT,GATAD2A,CD8B,IL12RB1,USP28,NDUFA11,BCL11B,RUNX3,CNOT6L,FUT11,MAF,ZDHHC24,IL32,PTP4A2,CST7,ETS1,RASSF1,PLEKHF1,FGFBP2,CCZ1B,STAT4,CD2,SAMD3,MYBL1,GNPTAB,CMC1,SENP5,TOB1,SH2D1A,APOBEC3G,ARPC5L,GZMA,ZAP70,AP001324.1,TRGC1,HLA-A,PLEKHA1,RCBTB2,SPOCK2,MIB2,SSBP4,HIVEP3,RNF125,OPTN,SNHG9,PTPN7,ATP8A1,FAM160B2,SLAMF7,RASGRP1,STOM,FYN,AC079250.1,SLC9A3R1,GK5,CASP2,CBLB,FRG1CP,DR1,PAXX,LYAR,APOL2,HEXIM1,CD3E,HCST,C12orf75,SPN,ANXA6,GTF3C1,CNOT11,TAPBP1,RAP1B,NUCKS1,SCP2,ITGAL,ZNF600,MBP,AC113404.3,ABCA2,SLC15A4,LCK,AL590867.2,BLOC1S1,NDUFB6,CTSW,F2R,PTPN4,PIK3R5,TRIM56,LONP2,YPEL1,SYNGR1,B4GALT3,RNASEH2C,RASAL3,KLRF1,FBXO7,PRKCQ,IPCEF1,PIGT,MOB1A,HLA-B,KLHDC4,HSPA5,APOBEC3C,TROVE2,TSPYL1,GABPB1-IT1,APMAP,PDIA3,NDUFB7,FAM78A,ZNF91,CD96,SLFN12L,VPS26A,SNRPF,RIC8A,CSNK1G3,ZFP36L2,AC004687.1,MYO1G,LPIN1,RHOC,APEH,AC027309.2,ZBTB38
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,CD4+ Memory/Effector T_PMID_33208946,T cell,CD28,CD5,INPP4B,SLAMF1,MFSD14B,TNFRSF25,CD6,ITGB1,CDC14A,CAMK4,DCAF8,TRAC,MIAT,TRIB2,CD3E,TRADD,PAG1,TTC39C,SIT1,CD2,LEF1,SLFN5,IL10RA,MAF,NFATC3,IL32,RASGRP1,PRKCQ,S1PR1,STT3A,RCAN3,ANKRD36B,CD52,LDHB,7-Mar,CLDND1,MICU2,SNX20,CD27,ARHGEF3,TESPA1,IL7R,CNN2,FAM102A,TCF7,CD96,PPP1R2,PNRC2,GANAB,TMEM123,RORA,TRAT1,MDFIC,AES,PIM1,LCK,RBL2,CDC25B,CTNNB1,CAP1,NAE1,CTC1,SYNE2,MCUB,GVINP1,DGKA,GPR183,PBXIP1,CAPN2,DNAJB1,STT3B,SCML4,CCSER2,KARS,SGSH,ICAM3,MRFAP1L1,TNFAIP8,THEM4,CD4,ARAP2,NECAP2,AP1G2,ESYT1,GDI1,ARHGAP15,ANKRD36C,TRAF3IP3,GSTK1,AL627402.1,ANKRD36,DPP7,OPTN,CNOT8,CCT8,BCL11B,LIMS1,PRNP,TNRC6C,EIF4H,MZT2A,G3BP1,GOLPH3,LINC00861,GIMAP2,RAB6A,NARS,POM121C,AC058791.1,TNIK,HIST1H1D,GRSF1,TAGAP,ITGA4,AL138785.1,HIST1H4C,TC2N,RAD23A,HNRNPF,FBXL5,CRIP1,LDLRAP1,EIF3L,CSDE1,SBNO1,SEPT1,HSPA8,HSPA5,GRAP2,SRSF8,PRELID3B,CLEC2D,PMS1,TRAM1,LPXN,CCND2,ZBTB38,PRKACB,AC099560.2,SEC61A1,PPP3CC,IFITM1,AHNAK,ABLIM1,ANXA6,SPTAN1,GHITM,SARS,MAT2B,PCNT,GOLGA7,IL6R,PRKCH,EZR,GATA3,KIF2A,FUBP1,PIM2,SNX6,PPM1G,MON2,SLC38A1,ACTR3,NONO,KIAA1109,CCT6A,SEPT2,AP1M1,STARD7,CMPK1,ABRACL,ERAP2,CD164,ANAPC5,OCIAD2,HUWE1,RNF19A,ACP1,MTRNR2L1,HNRNPCP2,SERINC5,RASAL3,MFNG,IL27RA,SKAP1,LEPROTL1,ORMDL1,TMED2,RASSF5,PTGES3,YME1L1,DOK2,CRBN,TMEM173,BUB3,TOP2B,HERPUD2,TULP4,PRKY,CYLD
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,CD4+ Naive T_PMID_33208946,T cell,MAL,LEF1,CCR7,LINC01550,TRABD2A,IL6ST,RCAN3,OXNAD1,CAMK4,TCF7,FAM102A,PRKCQ-AS1,SERINC5,ABLIM1,SCARNA21,SATB1,PCED1B,INPP4B,ITK,TRAT1,CHMP7,MYC,DGKA,CD28,CD27,LDLRAP1,LINC00861,LDHB,TESPA1,THEM4,DENND2D,SLC7A6,TXK,TC2N,PIM1,MLLT3,PIK3IP1,IL7R,CD4,BCL11B,CD3E,SNHG3,PSMA1,ITPKB,CHURC1,CD6,TNFRSF25,SCML4,STAT1,MGAT4A,SFI1,PCED1B-AS1,NOSIP,CMPK1,TMEM131L,C12orf65,PRKCQ,SELL,ATP1A1,AC099560.2,KIF2A,AL138785.1,LIX1L,PHC3,SNHG8,ERAP2,TRAC,MCUB,PVT1,AC242842.1,SPOCK2,ZBTB25,AC022210.1,ANKRD36,GIMAP4,STAT4,ELP1,TTN,ZNF83,SARAF,EIF4A2,PA2G4,DOCK10,METAP2,PDS5A,SNHG5,NDFIP1,CWF19L2,PPP1R2,RNF216,KLHDC2,HDAC1,LDB1,GIMAP7,TMEM63A,PRKCA,ANKRD36B,PDE7A,SLC38A2,PIM2,ADD3,PRDX2,CNOT8,RBM26,UGP2,AL590556.1,NOP53,ICAM3,EIF3H,RGS10,PRKCH,TAGAP,AES,C12orf57,SNHG14,PRPF6,TRAF3IP3,SEPT6,NOP58,ARHGEF3,TPP2,SAFB,GIMAP1,ST13,CD52,MAT2B,LUC7L,TMC8,EIF3FP3,GVINP1,UQCR11,AC090498.1,AC131235.1,EVL,NUP210,SEPT1,LCK,DUT,EIF3E,RNF4,AC002075.2,AC107956.1,TMEM123,CSNK1A1,PCNP,IL16,NPM1,GABPB1-AS1,SNRPA1,CNN2,AC018738.1,ACAP1,GIMAP2,DDX6,MTRNR2L1,HIST1H4C,S1PR1,ANKRD36C,ANAPC16,GYPC,FCMR,ZAP70,UQCRB,RASA2,G3BP1,CTNNB1,GOLGA8B,AC115223.1,RN7SL2,HSP90AB1,APEX1,CRLF3,ORMDL1,COX6C,RASSF5,SLFN5,CD3D,TBC1D10C,TTC19,COPA,LBH,CYTH1,NDUFB8,CYFIP2,SDHA,SNRPD1,DGUOK,TOB1,SRSF6,NOL4L,PPP6R2,PBXIP1,FYB1,AAK1,LEPROTL1,AGO2,AC007969.1,HSPA8,CLEC2D,CNOT2
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Natural Killer T_PMID_33208946,T cell,B3GNT7,ZNF683,TNFRSF18,XCL1,XCL2,KLRC2,KLRC1,CRTAM,AL357060.1,TRBC11,CXCR3,HLA-A1,HOPX,TRDC,DUSP2,RGCC,HLA-C,AC109326.1,CHST12,GATA3,KLRC3,SNHG12,SLC1A5,NFU1,XIST,CD7,SYNGR1,AC245297.3,ITGAE,KLRK1,HSD17B10,GNLY,SH2D1B,TRDJ1,CARD19,CTSW,SELENOS,IL2RB,ARHGDIA,ID2,ITM2C,SEPT11,CXCR4,EBP,SOCS1,ITM2A,PPIAP29,PPIAP22,SKIL,HLA-B1,HMGB1P6,SNRPC,TMED9,APOBEC3G,COPS6,DHRS3,LPIN1,GOLIM4,SEPT9,CPT1A,FXYD5,CD63,DHRS7,KLF6,DNAJC3,HSPE1,TENT5C,TMEM59,BST2,PDE4A,NDUFS8,VDAC2,SNRPB,SRI,ACAA2,AREG,CNOT6L,RARRES3,EIF6,JAK3,SLC3A2,ANXA1,MATK,GZMA,ARPC5L,KLRD1,PSMA5,MINDY2,KLRB1,LINC00869,MAP2K2,NFKBIA,PRXL2C,SPCS1,SCML4,TOR1AIP2,CASP8,HMGN2P3,CLIC3,PYURF,EXOSC6,LSM4,COMMD7,TFDP2,CEMIP2,PLP2,TMED10,PIN1,BZW1,CNOT9,CAPG,PPIG,FOSL2,TIMP1,POLR2G,MDH2,NSMCE1,C12orf75,PSMD8,CD300A,UQCRQ,NDUFAB1,PPP1CB,ADNP,CXXC5,C1QBP,PITPNC1,PSMB2,TAGLN2,PRKCQ-AS1,SCAND1,RNF115,TNFAIP3,XBP1,DCTN3,THAP5,CTSA,SRSF7,CLK1,SKAP1,FCRL6,PDCD6,TSC22D3,PSMB6,TSPYL2,TOMM22,PRDX2,LRPAP1,SPAG7,TRGC1,TUBA4A,SNU13,CCDC12,PRELID1,NOP56,DDIT4,SAR1A,TPI1,MTCO1P12,CD2,C12orf57,DDX50,COX5A,DYNC1H1,PPIA,RGS1,MYL12B,NSUN4,VPS281,ERGIC3,CPNE1,VAMP8,UQCRFS1,LMAN2,ZNF331,CD53,PSD4,HMGB1P10,DYNLL1,LAMTOR1,BBX,BTF3,MDH1,GTF3A,C16orf54,CBX6,ZNHIT1,MYL12A,ARHGDIB,SELENOK,UFC1,PSMD11,LINC01871,ARL6IP5,AC005000.1,BX679664.3,GUK1,CD247,TPST2,ATP6V0D1
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Natural Killer_PMID_33208946,NK cell,ANKRD20A11P,SH2D1B,CHST2,GZMB,TRDJ1,IGFBP7,FGFBP2,KLRF1,CD247,CLIC3,GNLY,KLRB1,BPGM,SPON2,GZMM,F2R,CST7,PRF1,NCR11,IL2RB,NKG7,MYBL1,AKR1C3,PRSS23,HOPX,HLA-C,C1orf21,FCGR3A,S1PR5,YPEL1,ADGRG1,TRDC,TRGV9,NPRL2,KLRD1,HLA-A1,HAVCR2,GZMA,TTC38,PDIA3P1,FCRL6,PTGDR,CTSW,GZMH,ID2,RUNX3,ABI3,NPC1,KLRK1,FUT11,TGFBR3,HDDC2,TXK,RARRES3,CREM,CEP78,EBP,TRBC1,GSAP,AOAH,DHRS3,CD7,GFOD1,SLA2,MATK,CHST12,APOL2,KLRC1,USP28,TPST2,TBX21,SF3B5,PTPN4,ZBTB16,SYTL3,MCTP2,CX3CR1,GPR65,TERF1,RASSF4,TRAPPC6A,MIEN1,TIGIT,APOBEC3C,DUSP2,CD244,SLFN12L,GIMAP7,DHRS7,FKBP11,NFATC2,PHB,GABPB2,GTF3C1,HLA-B1,ARL4C,TFDP2,SLFN13,PLEKHF1,AHSA1,PPIAP22,POLR2G,IDH2,PTPN22,CDC42P6,LLGL2,ABHD17A,SLC35F6,ZAP70,GNG2,NR4A2,RBM8A,TRAPPC2,IFITM1,PPP2R5C,OSTF1,ISG15,AXIN1,RASSF1,ADRB2,BST2,ATP5PB,LITAF,CD300A,RAB29,GK5,SELENOT,FIS1,PLAC8,HSH2D,PLEKHA1,HIPK2,CHCHD2,TBCC,PARK7,TECR,NOP56,C12orf75,DBI,STARD3NL,SIGIRR,MT2A,MAPK1,UQCRFS1,FUNDC2,PYHIN1,SLAMF7,RHOC,GYPC,ENSA,KLHDC4,PDCD6,FCER1G,AUTS2,ISG20,PSMB1,UBE2L6,EID1,SAR1A,GNPTG,MTCO1P12,NLRC3,CDC42SE1,SELENOW,NDUFS8,PSMB4,IDH3B,SELPLG,TRGC1,CD53,RNF115,EMC4,SFT2D1,CEMIP2,APOBEC3G,SKAP1,AREG,HLA-C1,C5orf56,PSMA4,CYC1,SYNE1,TSEN54,JAK1,C1orf174,GLTP,EIF3I,BIN2,AC022968.1,PPP1CA,PTGER2,RNF125,LPIN1,COMMD7,PRMT2,PURA,DECR1,PAXX,CNOT6L,SRP14
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Proliferating NK/T_PMID_33208946,NK cell,PIMREG,BIRC5,CDCA3,TK1,CCNA2,GTSE1,CDC45,MKI67,ASF1B,MCM10,SPC24,KIF2C,STMN1,UBE2C,TOP2A,UBE2T,AURKB,DIAPH3,ZWINT,NUF2,SKA3,APOBEC3B,GMNN,CLSPN,POLQ,GGH,RRM2,CENPM,CDKN3,CDCA8,PKMYT1,CENPN,CDC20,ORC6,MCM4,PCNA,RAD51AP1,IFT22,KNL1,CENPU,CENPF,ATAD2,CKS1B,E2F1,CDT1,GINS2,RMI2,CIT,TPX2,MAD2L1,MYBL2,WDR34,PTTG1,PCLAF,EZH2,FEN1,RFC4,TUBG1,ZNF367,RCC1,KIF14,NCAPH,C21orf58,SLC1A4,CDK1,NDC80,SGO2,DTL,CD160,CISD1,OIP5,DUT,CHEK1,CSTF2,APOO,TROAP,ACOT7,FANCA,PHF19,TMEM106C,ASPM,SNRNP25,AL035701.1,NUDT1,CCDC28B,DHFR,RFC2,HMGN2P3,CCL41,TTI2,NUCB2,IGFBP7,CKS2,MIS18A,PPIAP22,CHAF1A,MCM7,SAC3D1,HMGB2,DONSON,TYMS,MAD2L2,POLR1C,HIST1H4I,CENPH,PPOX,PPIH,HADH,DTYMK,SMC2,MCM6,RANBP1,HMGN2,BARD1,EIF4EBP1,SLBP,H2AFV,ITGB3BP,HMGB1P6,H2AFZ,PSMB5,PSMC3,KNTC1,WDR76,BRCA1,HMGB1P5,FANCI,ING2,ACAT2,AKR1C3,EBP,ATAD5,PXMP2,HIST1H1C,RPA3,HMGB1P10,TPGS2,TMIGD2,PRR11,AC108108.1,TESC,TMEM107,NDUFS3,HPRT1,COX5A,XCL2,HELLS,FIBP,AC109326.1,HMGB1,LRR1,COA3,ALYREF,FANCG,RAD51D,C2orf76,TMEM41A,CBR1,MCM5,CD38,CD7,HMGN2P4,DNAJC9,RAN,TPI1,DGCR6L,NEMP1,NSUN3,TMEM184B,GMPPA,AC017104.1,SMC4,BRCA2,PARP2,IDH2,CNOT9,FAM111A,RNF25,SYNGR1,DDX55,FASLG,DNMT1,KIF22,UHRF1,PPIA,DCXR,MMAB,PRDX2,BRI3BP,CDK4,ARMCX6,TUBA1B,SKA2,BANF1,DPY30,RRP36,PCNT,GZMB,FDPS,YARS2
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Neutrophil_PMID_33208946,Neutrophil,FCGR3B,CYP4F3,FFAR2,ALPL,S100P,LRG1,ADGRG3,MMP9,CMTM2,MMP25,VNN3,G0S2,IL1R2,CDA,MME,CXCR1,AL627309.6,SIRPB1,DHX34,CLEC4E,ZDHHC18,BASP1,MXD1,CRISPLD2,S100A9,APOBEC3A,DYSF,SLC25A37,ATG2A,MSRB1,IL18RAP,S100A8,NAMPT,CXCR2,TRIB1,UBALD2,LUCAT1,IFITM2,BEST1,PADI2,CSF3R,NCF1C,CATIP,AQP9,AL034397.3,S100A12,PFKFB3,PCBP1-AS1,FPR1,CEBPB,SOCS3,ABTB1,PDLIM7,MIDN,IRS2,DGAT2,PGGHG,ACSL1,ABHD5,CR1,GCA,PHC2,WAS,NCF4,CPD,ITGAX,TREM1,SOD2,YPEL3,C5AR1,PYGL,LPAR2,MGRN1,ADAM8,MEGF9,DENND3,KDM6B,BCL2A1,SLC11A1,FCGR2A,NCF1B,DOK3,LIMK2,AMPD2,CREB5,SEC14L1,TLE3,FAM129A,IRAK3,CSNK1D,RASSF3,PER1,XPO6,ABCA7,MSL1,MKNK2,ACTN1,CEBPD,RNF24,ARRB2,STX3,R3HDM4,FTH1P10,NBEAL2,IGF2R,MARCKS,RBM47,RALB,RASGRP4,NCF1,LRRK2,VASP,PREX1,ORAI2,FGD4,RASSF2,MAP3K3,VSIR,BCL3,TRIM25,VNN2,RTN3,TLR4,MNDA,RF000171,BRI3,FGD3,FTH1P20,RAF1,PLK3,PLAUR,TNFRSF1A,CCDC88B,UNC13D,PLXNC1,ATG16L2,LAMTOR4,RSBN1L,ANPEP,PGD,SRGN,NFAM1,RNF149,SPI1,ARHGAP9,CLEC7A,MYO1F,SLC6A6,ARHGEF40,IGF1R,PTAFR,SMIM25,RAB11FIP1,S100A11,CKAP4,HRH2,KDM4B,SLC2A3,TMEM154,FMNL1,RNF145,KIAA0319L,NINJ1,IQSEC1,DOCK5,DUSP1,PELI1,MX2,ARAP1,SLA,IL17RA,HCLS1,PLCB2,FKBP8,SDCBP,CHST15,SMAP2,NCF2,ENTPD1,SORL1,FOS,BTG2,ARHGAP26,MCL1,BCL6,IFRD1,ARPC4,PDE4B,NUMB,RUBCNL,SMCHD1,FTH1P3,TBL1X,KIAA1551,SPAG9,SAMSN1,RXRA,EVI2B,DIAPH1,AL512646.1
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Basophil/Mast 1_PMID_33208946,Mast cell,TPSAB1,MS4A2,CPA3,TPSD1,HDC,TPSB2,RHEX,MAOB,IL1RL1,KIT,AL078590.3,NTRK1,GATA2,HPGDS,RGS13,SLC18A2,TMEM233,LIF,KIAA1549,NTM,DLC1,AL157895.1,GATA1,MLPH,LINC01835,CDK15,LRP4,EMID1,RN7SL494P,KRT19,TPSG1,KCNH2,PBX1,VWA5A,ADAM12,EVPL,ITGA9,NRCAM,RD3,GCSAML,CAVIN1,TMEM44,SLC24A3,ENPP3,AL049647.1,IL5RA,SIGLEC8,FLJ21408,CAVIN2,PAQR5,CNRIP1,RAB27B,AHNAK2,PLAT,INKA1,CLU,TIMP3,CTTNBP2,TMOD1,AL731557.1,KIAA1522,SIGLEC6,DHRS9,HS3ST1,STXBP6,ERG,FCER1A,LXN,GMPR,SCIN,FERMT2,PMP22,TAL1,EPB41L1,JPH4,PTGS1,AL122020.1,CSF1,TMEM255B,CD9,ZNF462,PROCR,SIGLEC17P,ZNF521,RAB44,UNC5B,LINC00511,NT5DC2,LTC4S,ZNF704,ALDH1A1,AL138828.1,PIK3R6,ASRGL1,MEIS2,PDE7B,SLC26A2,BACE2,TTC7B,CPM,HS6ST1,HPGD,DIP2C,ACOT11,TNS1,TCTEX1D1,TANC1,PLPP1,VEGFA,RGS1,ACSL4,ANKRD9,PALLD,TRIM63,COBL,CADPS,MAST4,ARHGAP6,HAAO,ST8SIA1,BMP2K,FER,ZNRF1,DCBLD2,ZBTB32,NDRG2,BSPRY,CAPG,TSPAN4,ALS2,PROS1,MAP1A,TMEM220,LMNA,SLC44A1,LPCAT2,ARHGAP18,BATF,ALAS1,JUN,TSC22D1,C5orf30,GCNT4,CDCP1,LMO4,IL18,RENBP,AREG,ANKRD28,AL163541.1,MYO10,NAV1,EPAS1,TMEM273,LAPTM4A,RGS2,AC120498.2,AKAP5,ABCC4,BTN2A2,ST3GAL3,MITF,RAB34,RAB32,PLIN2,EDARADD,CATSPER1,NFE2L3,CD82,ATP6V0A2,SMIM3,KREMEN1,SLC39A11,SOX4,AC020916.1,PTGS2,TMEM176B,KRT1,GNA15,EGR1,ATN1,VAT1,CD274,CD33,ATP1B1,BNC2,KCNMB1,ACER3,CTNNBL1,SUSD1,AHR,TENT5A,PKIG,RHOBTB3,SPATS2L,TNFRSF21,SLC1A5,ST3GAL4,PARVB,RELB
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Macrophage_PMID_33208946,Macrophage,AC009093.3,CLEC5A,VSIG4,TGM2,SERPING1,CXCL3,OLR1,APOE,LPL,STAC,FN1,AC245297.1,IL1B,FBP1,SDC4,MARCO,EMP1,PPARG,SERPINA13,ALDH2,GPX3,HLA-DRB1,HLA-DRB11,AC270285.4,CXCL2,C1QB,HLA-DQA1,INHBA,C1QC,MMP19,C1QA,CCL20,APOC1,GPNMB,NUPR1,CTSL,HLA-DQB1,ITGB8,CLIC4,MRC1,C15orf48,MSR1,MCEMP1,HLA-DRB5,MS4A4A,LHFPL2,HBEGF,HLA-DQA11,ACP5,ENG,HCAR2,LGALS3,CD163,TNS3,MIR3945HG,LRRC59,RNASE1,SERPINA1,FLVCR2,ANXA2,ARHGAP31,LILRA61,MOB3B,ABL2,SLCO2B1,CD86,PDLIM1,AC270285.8,TMEM52B,IL1RN,CD300E,ARHGAP10,SPRED1,GSTO1,PEA15,OTUD1,FTL,EPB41L3,UBE2Q1,ANXA5,CCRL2,ICAM1,SLC15A3,LMNA,RNF144B,MS4A7,SIRPA,UBQLN1,COPRS,CTSZ,AKR1C3,MT1E,MGST1,SGMS2,CD9,DST,ANXA2P2,TUBA1C,SLC1A3,SMCO4,SRC,MYOF,KCNE1,HNMT,ETHE1,DSE,CXCL8,SLC7A7,ANPEP,CORO1B,RNF19B,LGALS3BP,DEFB1,CXCL16,ABCC3,GRN,CD81,GLUL,HSPB1,SIGLEC14,THBD,FABP5,PLAUR,P2RX4,TFEC,CRIP2,NAGA,ARL4A,C3AR1,TIMP1,PSMA6,SLC31A1,SCARB2,MPDU1,VIM,RETN,APIP,GRINA,GPX1P1,SIGLEC1,THBS1,LYZ,TGFBI,ELOC,KLF4,RIPK2,AGAP3,HCK,KYNU,LY96,CWF19L1,PILRA,RIN2,FCGRT,AVPI1,RASGEF1B,VAT1,WSB2,MITF,SNHG15,S100A10,FMNL2,LY86,PLIN3,CSRP1,SMIM25,YWHAH,ACER3,CTSH,BLVRB,GLA,BCAT1,MT2A,FTLP3,YBX1,PID1,DCUN1D3,ATP13A3,FTH1,SLC39A8,CD14,PPIF,RRBP1,ERAL1,TSPO,PNP,PATL1,CAPG,HEXB,CSTB,RAC1,MPHOSPH6,LILRB31,TNFSF13,SLC43A2,IL18,CCDC93,FTH1P8,AC240274.1,BLVRA
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Plasmacytoid Dendritic_PMID_33208946,Dendritic cell,SCAMP5,LAMP5,LINC01226,TPM2,EPHA2,SMPD3,COL26A1,AL357143.1,PROC,RASD1,CYP46A1,CLEC4C,PLXNA4,FAM221B,CUX2,SMIM5,PLEKHD1,PACSIN1,PTPRS,SLC35F3,SERPINF1,KRT5,PPM1J,AC097375.1,EPHB1,KCNK10,LILRA41,ENAM,FAM160A1,OR3A3,MAP1A,SLC4A3,DNASE1L3,KCNK17,AC119428.2,ZFAT,EGLN3,N4BP3,ANKRD53,P2RY6,TNFRSF21,AC023590.1,LTK,PLD4,HHIP-AS1,NR4A3,LINC00996,LINC01724,BX571818.1,P2RY14,TMEM53,AL355987.4,DUSP5,MYBL2,TTC39A,AEBP1,GRAMD1B,ITM2C,AL135925.1,IRF4,TOX2,VEGFB,GAS6,PARVB,SLC7A11,NRP1,SPIB,SEMA5A,AC008764.10,RIMS3,UGCG,PTCRA,TTC24,PHEX,AR,SAMD12,PPP1R14B,TCF4,LINC01225,LINC01800,TLR7,LRRC26,MZB1,CXCR3,CIB2,C12orf45,RUNX2,SCN9A,ST6GALNAC4,BCL11A,FNTB,IRF71,FAM129C,MGLL,VASH2,SYCP2L,SPNS3,SLC12A3,ZNF589,MCOLN2,RNASE6,CCDC50,MIR4432HG,NAPSB,GAB1,MED12L,BMF,CTNS,AC108704.2,PALD1,TARBP1,VIPR2,FLNB,AP001442.1,SLC7A5,PMEPA1,ATP13A2,BSPRY,AC141586.1,APP,GRASP,AL138756.1,AC099521.2,IRF8,UHRF1,IGKJ1,PHLPP2,ZNF10,SCARB1,PDPK2P,GPM6B,CD2AP,MPEG1,BCL2L11,CLIC3,BAIAP2,DST,NAA40,ABHD15,LGMN,PACS2,TRIT1,NIPSNAP3B,ZDHHC14,PNOC,LILRB41,PRXL2A,ANKS3,MTHFD2L,AC270285.4,RBPMS,JCHAIN,CBFA2T3,P3H2,CLCN5,CTPS1,COBLL1,FLT3,CCR2,GSEC,ZBTB10,TEX2,SETBP1,PFKFB2,FOXRED2,ACOX3,CARD11,GRAMD4,FYCO1,GAPT,AP1S3,LPCAT4,CYP2U1,PBX3,TBC1D8,AC006978.1,TATDN3,AC137932.1,SIK1B,TSPAN13,MPZL1,CSNK1E,PUS1,PIAS2,S100PBP,USP9Y,AC008124.1,GNA15,IQCE,LINC00641,C12orf75,ZXDC,COX15,GPX1P1,SULF2,RCAN1,ARSD,BICD2,DHRS12,FAAH
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Dendritic_PMID_33208946,Dendritic cell,AXL,DAPK1-IT1,FRMD4A,DOCK4,C1orf54,FMNL2,WFDC21P,PRUNE2,FZD1,GGTA1P,ZNF366,LEKR1,SLC35E4,BATF3,FPR3,CLIC2,PDGFC,HLA-DRB31,PKP2,RBAK,FILIP1L,AC069549.1,SRGAP1,ENHO,DPYSL2,ARHGAP6,TREM2,HLA-DQB11,FECH,GPR34,KLF4,VENTX,PALD1,MRC1,ATF5,AC096564.1,HLA-DPB11,CTSZ,STEAP3,GAS6,SLC1A3,CST3,CCNYL1,NAPSB,HLA-DQA21,HLA-DRA1,ZNF195,BCAT1,BTBD19,SLC41A2,CD163,SLCO2B1,CLEC10A,EPB41L3,CTNS,FLJ46906,ALCAM,AP001363.1,ZNF639,C1QC,SH3BP4,ATF3,LACTB,SDSL,MUM1,SERPINF1,GRASP,GOLIM4,DAPK1,SLC31A2,NANS,C3AR1,FBP1,AFDN,RASA4,VSIG4,FMNL3,PICK1,GNB4,PDK4,NRP1,AC020916.1,PLXDC2,VAC14,AP000766.1,FAM20C,EMP1,NAV1,AC131212.2,GSN,C1QA,PIK3CB,AHR,C1QB,PDE5A,SCRN1,CYP2S1,YWHAH,ARHGAP21,GPX1P1,ZNF846,PMP22,ZNF5031,CSF1R,NDUFAF2,DSE,KLF9,MS4A4A,LYZ,IL4I1,MCU,SLC1A4,DAB2,SLC40A1,VASH1,NDRG2,NPM3,ACCS,DTX3L,SKI,CPVL,MAFB,ACOT13,APP,CD14,WDFY4,WDR81,HLA-DRA,RF004021,ZFHX3,ZNF487,WDR47,RAB32,CHKA,MITF,HLA-DMA1,ARPIN,INAFM2,BTBD9-AS1,AFMID,CSNK1E,P2RX7,ZNF121,SAP30,SH3PXD2B,KCNK6,AC008969.1,ADCK2,CD74,MICALL1,KIDINS220,TGFBR1,HIC2,ZCCHC2,SRGAP2,RNU4-62P,AC087286.2,C12orf45,SLC12A9,ACOT9,HPS5,CACUL1,KCNMB1,MSR1,LGALS2,PACS2,SLC19A2,SPRED1,P2RY13,VIM-AS1,RTL8C,TGFBI,RF000121,AL031727.1,INSR,AC135050.6,TEX2,ADAMTSL4,PLD4,NPIPB11,DOCK7,MCFD2,MAN1A1,ZNF44,HAUS2,AKT1,ZDHHC2,ZBED3,PIGG,NUDT19,ARHGEF12,CPM,PACSIN2,AHCY,MS4A7,JAZF1,CD81,HLA-DPA11,CXCL16,GRN
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Myeloid Dendritic Type 2_PMID_33208946,Dendritic cell,C1orf54,S100B,APOL4,PLEKHM2,ANKRD22,NFATC2IP,NISCH,ZBTB46-AS1,AXL,SERPINF1,CST3,DUSP3,PRR11,CD46,RAB5B,PARM1,MPZL1,GON4L,SEMA4A,MYOF,IVNS1ABP,PPP1R14BP3,FAM117B,CRIP2,UBE2S,CPVL,HLA-DMA1,NAPSB,ABCA7,TBC1D22A-AS1,PKP4,FCER1A,GSTZ1,RGCC,RF000031,GATD1,SERTAD1,TRIP10,HAVCR2,PRPF4,HLA-DRA1,MIR1244-2,MCOLN2,WFDC21P,RNASE6,MS4A6A,SPDYE2B,ADPRH,STAC3,GSN,ANKRD54,PDE4DIP,HEIH,PDCD7,PYGB,NBPF12,NAGA,AP1S3,ELMOD2,P2RX4,STK11IP,GCN1,SAT2,RNF181,NLRP3,GATD3A,HNRNPA0,S100A10,SRGAP2B,WASHC2A,CLTB,ZBTB43,HLA-DQB11,LY86,SPECC1,ATP1B1,DAGLB,FARP2,CD86,LGALS2,BLVRA,PALD1,STAMBP,ANPEP,SLC31A2,CHCHD7,FBXL15,SLC4A7,CAMK1D,C9orf16,FOSB,GPX1,VAMP5,PPT1,WASHC1,ZMAT3,ARAF,AKAP9,VIM,ADAM8,TSPAN33,DENND1B,ST14,LYRM4,CABIN1,ARL8A,EHBP1L1,WDFY4,IER2,CD83,FAR2,FCER1G,NBEAL2,TRPV2,SMCO4,IFT52,ALCAM,R3HDM2,LMNA,R3HCC1,TOP2B,SELENON,TMEM106A,AC243960.3,MED8,ABL2,NUTF2,TSSC4,UHRF1BP1L,MARS,CUX1,CAPNS1,CLPP,CXCL16,PLSCR1,KLF4,CMSS1,TXNDC17,CDC27,ITCH,TPGS1,AP001363.1,PABPC4,CD74,USP1,ALDH2,NUDT1,MYH9,PNPLA6,TBC1D2B,SVBP,GNG2,GLB1,C1orf162,IFI30,TUBG1,HNRNPA1L2,NPM1P27,UBL5,SAMD8,SLC25A1,PLBD1,GRN,CMPK1,RASGEF1B,HEBP2,NFKBIE,FABP5,HCK,EIF2AK4,CTSH,LGMN,NOTCH1,SLC16A3,BHLHE40,PELO,H2AFV,ARL4A,TJAP1,PDLIM1,WASH3P,CCDC57,ROGDI,CD1D,NBPF14,MS4A7,RF000171,ATP6V0D1,OSER1,ULK1,P2RY6,LPAR5,NRROS,FAM214B,VPS281,UBQLN1,DYNLL1,RGS10,SUSD1,ERCC1
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,IGSF21+ Dendritic_PMID_33208946,Dendritic cell,FOLR2,CCL13,CD163L1,RNASE1,TMEM37,PLTP,TMEM176B,GFRA2,COLEC12,LGMN,PPIC,HLA-DRB4,CCL2,MMP19,MAMDC2,ME1,SLCO2B1,STARD13,TMEM176A,PALD1,MRC1,C1QA,NAV2,FPR3,APOL4,DPYSL3,WLS,ENPP2,NLN,MS4A4A,GGTA1P,DAB2,CTSL,MERTK,GPR34,MSR1,PLAU,ATF3,VSIG10,FILIP1L,C1QB,PLEKHA7,ZFX,PDGFC,HLA-DRB11,SELENOP,ACE,NRP2,MS4A14,IGFBP4,PAPSS2,HBEGF,HLA-DOA1,NPIPB3,F13A1,GOLIM4,XIST,SLC11A2,TFRC,HLA-DRB1,FAM20A,FRMD4B,TVP23A,CA11,TSPAN15,CXCL1,IGSF21,FAH,C1QC,CXCL2,CD14,CNRIP1,OPHN1,TREM2,PDK4,RGL1,H1F0,LILRB41,CXCL3,AC243960.3,NPIPB13,RAB3IL1,ITSN1,SOWAHC,HLA-DRA1,MS4A7,STAB1,HSPA6,MS4A4E,LAIR1,NFKBIE,FRMD4A,HSPA1B1,CD209,GPX3,TSPAN4,HEBP1,DST,CTTNBP2NL,P3H2,TGFBI,ITGB5,G6PC3,EPSTI1,QKI,HSPA7,SLC40A1,LY96,CSF1R,ABI2,SIRPA,STON2,PEA15,HLA-DQB1,CPM,SCN9A,SIPA1L1,CD81,GAL3ST4,GNA15,VMO1,AFDN,FCGR2C,MYO7A,SERPING1,SGK1,KLHDC10,LGALS3BP,IRF5,GATM,SLC29A1,SH3TC1,UTP20,SLC7A8,BLVRB,SDC3,CTSB,MS4A6A,SNX8,EMP1,DUSP6,SLC25A44,HLA-DPA1,FUCA1,NEK6,LMNA,CDKN1A,SMCO4,AL392172.1,FGD4,A2M,AC270285.4,AC270285.8,HLA-DRB5,CLIC4,STIP1,TGIF1,ABL2,MITF,TOMM70,CD83,GPX1P1,ATG7,HMOX1,ENG,NR4A2,IDH1,FMR1,HLA-DMA1,CCDC186,MRAS,CYTH2,VSIG4,TFE3,TBC1D14,PI4K2A,RSPRY1,FOSB,TIMP2,RAB31,EGR1,SLC2A9,CTSC,NFIC,OLFML2B,LAIR11,SLC1A3,SLC31A2,SIGLEC1,SRGAP2,BAIAP2,HNMT,PLD3,ATP6V0A1,GPX1,KCNMA1,C3AR1,SOCS6,VENTX,RHOB
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Classical Monocyte_PMID_33208946,Monocyte,VCAN,CYP1B1,CD36,LGALS2,LRP1,STAB1,SLC24A4,CSTA,CLEC12A,CD1D,KCTD12,FAM198B,PLXNB2,SMARCD3,FCN1,ZNF385A,ADAP2,NLRP3,NOD2,THBS1,CCR2,TLR8,CYBB,DMXL2,PLCB1,MAP3K20,MS4A6A,INPPL1,UBXN11,MAFB,HK3,CD300E,CD300LF,C9orf72,PLBD1,TRPS1,PLXND1,LYZ,CPVL,TLR2,TIMP2,KCNQ1OT1,TNFAIP2,GATAD1,GAS7,MCTP1,PRAM1,AC114760.2,PLXDC2,ZFHX3,NACC2,C20orf194,SLC27A1,CCDC88A,ALDH3B1,IMPA2,TET3,MYO15B,MLKL,FGL2,GNB4,PPM1F,TNFSF13B,TGFBI,RASSF4,POU2F2,NCF2,MANBA,CFP,KIAA0930,TNK2,AC122718.1,RHOB,CD33,NEAT1,PDK4,ATP11A,SULF2,NFAM1,PLEKHO1,CD14,AC003681.1,ETV6,CLEC7A,APLP2,APAF1,KYNU,EHBP1L1,ARRB1,SLC7A7,H1FX,GAA,TET2,1-Mar,FES,EMILIN2,C19orf38,LTBR,NOTCH2,SH3TC1,ADA2,SIRPB2,P2RX7,MPEG1,TPCN1,DENND1A,MNDA,CTSS,NLRP1,AGTPBP1,HRH2,ZFAND5,SPECC1,KDM1B,NPIPB11,PICALM,AC021078.1,TYMP,LGALS9,BACH1,ZEB2,LRRK2,JDP2,CLMN,KCNK6,QSOX1,LINC00937,CD163,MEF2C,PAK1,MAN2C1,PPP1R12C,DPYD,PRKAG2,GNAQ,GRINA,RXRA,SNX30,SCIMP,ADAMTSL4,PABPC4,GAB2,ETS2,ZDHHC7,ARPC1B,MIS18BP1,PNPLA6,SYNE3,RBM47,CDH23,ATG16L2,IL13RA1,FRY,INSR,NADK,NAGK,GNS,PILRA,PRKCD,ZNF106,CCDC144B,ARHGEF2,FGR,FKBP15,STXBP2,NCOR2,GARS-DT,SRGAP2,DUSP6,F13A1,PABPN1,SREK1,FGD4,NLRP12,DUSP3,MINK1,USP15,IRF5,FAM45A,LEPROT,KLC1,MS4A7,AHR,KLF4,SNX29,NSRP1,SUPT6H,KIAA0513,MLXIP,MICAL1,IL17RA,RREB1,ADAM15,JAML,LYST,AP1S2,GIMAP8,SULT1A1,LFNG,DENND4B
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Nonclassical Monocyte_PMID_33208946,Monocyte,AC104809.2,CKB,CD300H,CASP5,LINC02432,MFN1,GPBAR1,LRRC25,CSF1R,AC064805.1,AL031985.1,NEURL1,VMO1,ABCC3,MYOF,PPARGC1B,TAGLN,SMIM25,ZNF703,WARS,DAPK1,RIN1,TCF7L2,HES4,RGS12,OAS1,RNF144B,SNX9,MMP24OS,C3AR1,KBTBD2,TBC1D8,CROCC2,SERPINA1,SIGLEC10,AL157871.3,MS4A7,FCGR3A,TMEM175,RHOB,TTYH3,MON1B,SPATA6,BCAT1,EPB41L3,CALHM6,IFITM3,PDK4,SLC7A7,MAFB,AC090559.1,LILRB21,CAPRIN1,PJA2,FAM110A,BMPR2,EIF3A,SNED1,PIK3AP1,UBASH3B,CHST15,LTBR,CFP,NAAA,DMXL2,CD86,DLGAP4,EIF1B,CARD9,PSAP,EML4,CTSL,SLC37A2,SFMBT2,ALDH3B1,C15orf39,MS4A4A,PECAM1,FLVCR2,KLF4,LYN,SIDT2,INSR,CXCL16,SH3PXD2A,SECTM1,CDH23,RHOC,WIPF2,HCK,GRK3,NAP1L1,FNIP2,HMOX1,PAPSS2,CTSS,MPEG1,MTSS1,RRAS,ADGRE2,HK3,AIF11,CEP192,SCIMP,INSIG1,CBR1,ZNF385A,EIF4EBP1,DIP2A,IRF5,LFNG,LYZ,CLEC12A,PILRA,ZFAND5,SLC31A2,TBXAS1,AMPD2,SORT1,SLC8A1-AS1,SNX18,FAM214B,SLC24A4,C9orf66,BATF3,HEG1,ZBTB11,STK11IP,FCN1,CNIH4,SLC31A1,APH1B,COTL1,SCARB2,CD300E,CMTM6,NCOA6,ASAH1,CD300LF,KYNU,CD300C,GNS,RAB24,RHOQ,FGD2,CERKL,MVP,GCH1,UTRN,PKN1,HDHD5,DNMBP,CBFA2T3,ELF4,SAT1,ZMPSTE24,YPEL5,WBP2,TNFRSF1B,PIEZO1,OAS2,NBPF9,NPC2,LMO2,WDR11,MAPKAPK3,ESRRA,RRP12,CST3,NOD2,CHSY1,TSC2,PLXNB2,ARRB1,PLXNC1,FAM49A,FCER1G,UNC93B1,SH2B3,CPPED1,KIAA0513,FTH1,FAM168A,PIGN,FGL2,LYL1,TLR8,ARL4A,CPVL,DICER1,MYD88,TESC,YEATS2,NPL,ULK2,MAPK7,RELT,CTSZ,SNHG15,DTX3L
A molecular cell atlas of the human lung from single cell RNA sequencing,33208946,Intermediate Monocyte_PMID_33208946,Monocyte,RND3,FABP3,RAB7B,GBGT1,TNFRSF12A,PCOLCE2,CES11,FCGR1CP,SPOCD1,STARD8,EGR2,AL365277.1,GPNMB,SLC19A3,FFAR4,HLA-DQB1,CTD-3080P12.3,GK-IT1,C8B,CYP27A1,CDK18,PPARG,TMEM74B,CCDC9B,A4GALT,CYP2S1,MFSD2A,AL390719.1,AC004817.3,AC091182.1,TTBK2,FOSL1,HLA-DQA1,NRP1,INHBA,NUPR1,AL355802.1,EPB41L1,TFCP2L1,ATF3,PHLDA3,CA2,ZNF282,PKD1P61,HLA-DRB1,HLA-DRB11,AC127070.4,ANO5,HNMT,AC016876.1,PUS1,WDR81,E2F6,GNG12,KCNMB1,RGCC,ACP5,HLA-DQA11,TMEM53,AC112496.1,ABCC3,LGALS3,SLCO2B1,TMEM150A,CD83,ACVR2A,R3HCC1L,SLC25A33,TFPI,CDCP1,ANKS1A,SPRED2,HES4,EMP1,ADGRV1,HCAR2,FOLR3,CPEB2,DEPDC5,BHLHE41,FMNL2,PARAL1,CCRL2,IER31,BMP2K,NT5DC2,HLA-DRB5,FLNB,SLC37A2,RAB20,TPMT,CD276,CTSL,NRIP3,FCGR1B,NAPSB,OASL,PAK1IP1,BATF3,DOCK4,AL390955.2,BTBD19,HSD3B7,AC245297.1,FABP4,AC245060.4,LPL,SERINC2,OSCAR,TMEM44-AS1,NOP16,CXCL3,STAC,EIF3J,PDP2,UBASH3B,RN7SL368P,MED8,CXCL2,FRMD4A,HIVEP1,SLC7A8,SRC,ZBED3-AS1,LILRA21,SAP130,PSMC1,AC008038.1,NMB,ZCCHC17,Z97192.3,MMP19,NFKBIE,TCF7L2,SECTM1,SLC43A3,PLA2G15,HRH1,CD109,AL450998.2,SGK1,PEA15,LINC00963,MSR1,SPINT1,STX4,GK-AS1,CDK2AP1,HBEGF,C15orf48,CD163,TNIP2,CPVL,HMOX1,NECTIN2,TOR4A,ABCG2,MAML3,CD9,RASGEF1B,PPP1R15B,ADTRP,C1QB,GAS2L3,CD300E,AFMID,DSE,PITPNA,LMNA,KLHL18,MIR155HG,TCEA2,ICAM1,AIMP2,FTH1,ARHGAP271,EIF4A1,DDIT3,RRN3P2,SLC25A51,RIPK1,PLAUR,IFI30,LTBR,HMGN2P46,APOE,HCAR3,AXL,SLC41A2,CREG1,MMD,ACOT1,CLCN6,AC011586.2,RSPH3,OXSR1,RIPOR1,ST6GALNAC4,KCNE1,NUBP1
A pan-cancer single-cell RNA-seq atlas of intratumoral B cells,39406187,Resting Memory B cells_PMID_39406187,B cell,LY86,BLK,LTB,MARCHF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer single-cell RNA-seq atlas of intratumoral B cells,39406187,Activated B cells_PMID_39406187,B cell,CD69,CCR7,SLC2A3,REL,NR4A2,CHMP1B,CD83,NFKBID,TUBA1A,BCL2A1,TNFAIP8,RSRP1,IDI1,HLA-DRA,DDX21,DNAJA1,LY9,WSB1,BTG1,FOXP1,SKIL,SDCBP,JUNB,KDM6B,MSN,CMTM6,DUSP2,IRF8,CORO1A,SRSF3,SELL,CD53,PDCD4,SMIM14,IDS,CKS2,LTB1,LITAF,NPM1,SNX2,HLA-DRB1,HLA-DQB1,GPR183,HLA-DQA1,RHOG,SWAP70,JAK1,CD37,DDX5,HLA-DMB,NCOR1,DDX3X,COTL1,ELF1,FCMR,SAMSN1,HSPH1,CD82,MS4A1,RGS2,LY861,CD40,RBMX,FUS,HSP90AB1,CREM,LAPTM5,KMT2E,CXCR4,RIPOR2,LYN,ZFP36L1,CALM2,SARAF,SMCHD1,PABPC1,H3-3B,DRAM2,CD74,RBM8A,HSPA8,SNHG7,IER2,CLK1,PTGES3,TERF2IP,ZFAS1,ZNF331,PTPRC,LCP1,RALGPS2,LRRFIP1,PRKCB,TAF7,SYNGR2,LAMTOR5,CDC42,HCLS1,SERTAD1,CD48,PRDM2,ARHGAP24,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer single-cell RNA-seq atlas of intratumoral B cells,39406187,Conventional Plasma cells_PMID_39406187,B cell,MZB1,DERL3,FKBP11,SSR4,IGLV3-1,PRDX4,IGLC3,IGLC2,FKBP2,SEC11C,SDF2L1,IGHA1,SPCS3,ITM2C,IGKC,MYDGF,HSP90B1,TXNDC15,IGHG1,GSTP1,TMBIM6,CD63,LMAN1,IGHG2,NUCB2,CD59,CRELD2,PRDM1,XBP1,ERGIC3,TMEM59,RPN2,TXNDC5,CD27,SPAG4,SSR3,LMAN2,RRBP1,GADD45A,MANF,SLAMF7,SPCS1,SEL1L,PIM2,TMEM258,TMEM208,IGHG4,TMED9,CD38,ISG20,IGHG3,RABAC1,SELENOS,SPCS2,ATRAID,PLPP5,TMED10,NANS,SIL1,SDC1,HERPUD1,VKORC1,KRTCAP2,SEC61B,IFNAR2,MEI1,MLEC,HLA-C,NFKBIA,PPIB,ARSA,NPC2,ICAM2,CYTOR,RAB30,ERLEC1,KDELR2,PDIA6,IGHM,TMEM205,TECR,PSAP,JSRP1,FNDC3B,COX5A,CNPY2,TENT5C,HSPA5,HM13,GLRX,IGHA2,SEC61A1,AKR1A1,FTL,IDH2,SRPRB,OSTC,TNFRSF17,TXNDC11,DDOST,CHID1,JTB,TMEM147,DAD1,DNAJC1,UBXN4,CLPTM1L,PLD3,FIS1,SLC3A2,CUTA,ZNF706,CDK2AP2,REEP5,PDIA4,GAS6,RPN1,TOR3A,TRAM1,TAPBPL,COPE,ANKRD37,WDR45,SAR1B,FNDC3A,FCRL5,NAXE,DNAJB11,SAT1,SEC61G,JCHAIN,TPST2,ITM2B,TRIB1,VSIR,SYVN1,MAN1A1,HDLBP,SUB1,DERL1,LRPAP1,NEAT1,CANX,DNAJC3,SERP1,OST4,HLA-B,ACADVL,CYBA,EDEM2,P4HB,FUCA2,GMPPB,DNAJB9,PSMB6,OS9,ATP6V0B,UQCRQ,ZBP1,ALG5,PREB,CREB3L2,LAMP2,TAPBP,PSMB1,SRPRA,PDIA3,COPZ1,SSR1,TMED4,SEL1L3,ELL2,ANKRD28,PSME2,SLC35B1,PRDX2,CADM1,IL2RG,BUD23,SEC14L1,SRM,PRDX5,TMEM179B,HAX1,PHPT1,RGS1,PDK1,DPP7,SEC13,CFLAR,IFI6,EDEM1,KDELR1,ATP5F1D,LGALS1,FBXW7,TMED2,EMC7,NDUFB11,SEC62
A pan-cancer single-cell RNA-seq atlas of intratumoral B cells,39406187,Naive B cells_PMID_39406187,B cell,ST13,UCP2,CDC37,BANK1,STK17A,CNN2,XRCC6,EIF1B,DAZAP2,UBE2I,LYN1,CXCR41,HNRNPC,FOXP11,FCMR1,TCL1A,CD831,CD47,HLA-DRB5,FCER2,CD551,ARF11,RAN,CD72,ARHGDIB,SSR21,HLA-DPB1,HLA-DRB11,FXYD5,ADAM28,LAPTM51,PDE4B1,PRRC2C,TPM3,RSRP11,EIF4A2,SNU131,HLA-DRA1,SNX3,YWHAZ,MYL12B,RUBCNL,YBX3,HVCN11,POMP1,CD52,C4orf31,HMGN2,HLA-DQA11,RHOH1,LINC00926,TUBA1A1,CD371,CLIC11,RASGRP2,PPIA,PLAC8,HLA-DPA1,H2AZ11,SELL1,SAP181,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer single-cell RNA-seq atlas of intratumoral B cells,39406187,Stressed Plasma cells_PMID_39406187,B cell,HSPA6,HSPA1B,HSPA1A,DNAJB1,1-Jun,HSPB1,FOS1,ZFAND2A,DUSP11,HSP90AA11,UBC1,XBP11,EGR11,NR4A1,IGHG31,BTG21,PPP1R15A1,HSPA81,RGS11,HSPA51,IGHG41,HSPD11,KLF21,IER22,FOSB1,HM131,HSPH11,PIM21,IGLC31,DNAJB91,IER51,IGHG11,TENT5C1,IGHM1,TOR3A1,P4HB1,JCHAIN1,PDIA61,DDOST1,MGAT11,HERPUD11,PSAP1,SDC11,TRIB11,GORASP21,RPN11,HSP90AB12,GADD45B1,ARMCX31,OS91,CRELD21,JUNB2,IGHA11,IGLC21,IRF71,CALR1,TSC22D31,TMED21,SLAMF71,ATP5F1A1,PDIA41,CITED21,SLC3A21,TMED91,BCAS21,TAGAP1,TRAM11,RPN21,VSIR1,ANKRD371,PDIA31,PRDM11,SEC131,IDH21,JUND1,ANKRD281,RHOB1,HSP90B11,KDELR11,SSR11,ARF41,TXNDC111,LDHA1,ACADVL1,ARSA1,UBE2J11,SSR31,LMAN21,YIPF31,ITM2C1,DNAJA11,CANX1,TPST21,RAB1A1,NEAT11,SDF41,FCRL51,SEL1L1,CYTIP1,CHPF1,GRN1,IGKC1,KDELR21,KLF61,VCP1,DERL31,LRPAP11,GOLGB11,ERGIC21,SQSTM11,DNAJC11,NUCB21,SEC61A11,ELL21,ERN11,SPAG41,IRF11,CDKN1A1,SRPRB1,DNAJC31,SPCS21,SRM1,CDV31,TECR1,CLK12,MEI11,DUSP51,ATF41,POU2AF11,NEU11,SEC14L11,SSR41,CCNL11,DUSP23,SIL11,HDLBP1,COPE1,DNAJB111,RALY1,MZB11,ERLEC11,HLA-C1,CACYBP1,UBB1,HSH2D1,PRDX41,MYDGF1,SPATS21,TPM41,CYBC11,TMED101,SEC11C1,CD381,DERL11,ERGIC31,ALG51,RRBP11,ZFP36L21,CTSZ1,RGCC1,RGS22,SELENOS1,VIM1,BST21,NOP581,CDK2AP21,AKR1A11,BSG1,EIF3A1,PTP4A21,SDF2L11,PRDX21,ILF21,TPD521,FKBP111,DSTN1,IFI61,FTL1,TRABD1,PTGES31,HSPE11,DPP71,EIF2A1,EIF5A1,GPBP11,CCT81,CNBP1,CTSS1,MORF4L21,SRP721,NPC21,GNL31,TXNDC151,SLC38A21,AUP11,TAPBP1,GRB21,LMAN11,MTDH1,UBE2L61
A pan-cancer single-cell RNA-seq atlas of intratumoral B cells,39406187,Atypical Memory B cells_PMID_39406187,B cell,DUSP4,CD821,ISG152,IFI44L,CAPG1,HLA-DPB11,ACP5,COTL11,IFITM12,CD691,HLA-DPA11,SPIB1,ITGB2,RGS23,ARPC1B,MS4A11,ACTR2,BCL2A11,XAF1,RILPL21,OAS1,HLA-DQB11,PLSCR1,CORO1A1,HLA-DMB1,SH3BGRL3,ARHGAP241,MX11,ARHGAP25,PTPN6,ANKRD441,HLA-DQA12,GPR1832,TRIM221,ZC3HAV11,TRIM38,HLA-DRB12,IFITM2,RGS191,PTPRC1,LCP11,CYB561A3,CD19,CIB1,CMTM61,CCDC12,CREM1,SMIM141,HLA-DRB51,PLAC81,CHD11,IFI62,JMJD1C,PTPRCAP,ID31,CDC42SE1,C1orf432,PARP141,HLA-DRA2,SNX21,LBH,REL1,LAPTM52,MYL12A,IRF81,HLA-DMA,TMSB4X,PLEKHO1,SP110,CD521,DNAJB61,PKIG1,LITAF1,LGALS9,TNFRSF13B,LIMD2,STK17B1,SYK,PRPF38B2,ADGRE5,SEPTIN7,CD481,CAPZB1,CHURC1,CD832,RESF1,SP1001,BCAS4,NOP582,HNRNPF1,RGCC2,CCR71,ARPC21,CAPZA12,PSMB82,EPSTI1,ADAR2,CAP1,SAMD9L,CRIP11,SCAF11,DRAM21,CHORDC12,POU2F21,ARPC5,MOB1A,SH3BGRL,IFI161,LY6E2,PRR13,EIF2AK2,CD741,SEC11A2,RAC2,CD442,AKAP13,LSP12,RHOH3,SLC2A31,CDC422,SRI1,MYL12B1,SUPT4H12,BTG11,ALDOA2,CFL11,EIF3F1,INPP5D1,ATP6V0D1,PFN1,PSMB91,NT5C3A,EML4,TCF42,CCDC501,ARHGAP15,GDI21,FCRLA1,FCMR2,CLECL1,DDX211,CD531,IRF12,ANXA22,FMNL1,NR3C11,ROCK1,LAT2,STAT11,ARPC5L2,TAOK3,HCST,SCIMP,TLN1,SH3BP5,RHOG1,MX2,CYRIB,IRF72,CD401,BASP11,WDR1,TANK,LAPTM4A2,TPM31,CELF2,FAM177A11,GMFG1,EVL,UBE2L62,ARHGDIB1,TUBA4A2,NR4A22,BLK1,CTSZ2,NEDD81,RNASET22,HSPE12,H3-3B3,ARID4B1,GLIPR11,MYCBP2,YPEL52,GNAI22,MSN1,DYNLT11,TAGLN22,RIPOR21,CD372,SP1401,CD991,WIPF1,CSK,GABARAPL22,BRK11,HSPD12,PPP4C,FTH11,AHSA12,ENO11
A pan-cancer single-cell RNA-seq atlas of intratumoral B cells,39406187,IGKC-high Plasma/Plasmablasts_PMID_39406187,B cell,IGHA21,IGKC2,JCHAIN2,IGHM2,IGHG42,IGHG12,IGHA12,IGHG22,IGHG32,SDC12,IGLC22,TNFRSF172,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer single-cell RNA-seq atlas of intratumoral B cells,39406187,GC B cells_PMID_39406187,B cell,RGS131,SERPINA91,MYO1E1,MS4A13,MARCKSL11,LAT22,LCK1,IRAG22,HLA-DMB2,PAG11,PRPSAP21,HLA-DPA13,ZFP36L12,CXCR53,HOPX1,LIMD22,TCL1A2,CD222,PTPN61,MTF21,COTL13,BACH22,LPP1,LTB4,TMEM131L1,NEIL11,RFTN12,LCP13,CD79B3,CD402,SWAP703,SMIM142,LMO21,IRF83,MEF2B1,PTPRC3,HMGN11,ACTG14,ARHGAP171,ITGB21,CORO1A3,BCL11A1,PPP1R182,PLEK2,GPR181,CD722,HLA-DQB13,RAC22,HLA-DQA14,RHOG3,ACTR33,RRAS21,HLA-DRA4,TAF92,CD533,HLA-DPB13,REL3,WIPF12,CD374,CYB561A32,ARPC1B2,CR21,CD833,BCAS42,MEF2C3,HSPA42,MKRN1,CKS23,TWF21,CD822,PFN12,HLA-DRB14,TBC1D10C1,ACY31,PPP1R12A2,STAG31,ELL31,PTPRCAP2,SP1002,CSK2,BCL7A1,LYSMD22,SSBP21,TMSB4X2,CD523,SPI11,AC023590.11,RAPGEF51,PDCD101,DNAJC10,ZFAS12,CUL31,ETS11,SSH21,CD191,VPREB31,TOX1,ZCCHC71,CYBB2,EIF3E,BCL2A13,BLK2,PSMB93,LAPTM54,ARPC42,UCP23,TERF21,FAM76B1,ARHGDIB3,BASP13,APBB1IP2,CCT6A2,POLD44,H3-3A1,BACH11,SF3B13,TMEM1233,AHSA14,IL4R2,HLA-DMA2,SASH31,RABGAP1L2,SYNGR23,CDC42SE23,SUGCT,RIPOR22,MCTP21,ANP32B1,TACC11,PARP13,NCF13,RCSD11,GTF2E21,PSMD42,FOXN3,BRK13,TRAF5,MYBL11,AIP1,HMGA12,ACAP21,MBD42,IL163,NT5C3A1,EVL2,BPTF2,SORL11,METAP21,HLA-DOB,USP221,SYPL11,EMB,TMED81,ZFAND63,DHX361,MARCHF12,PLCG23,AFF3,CD812,SELENOT1,VGLL41,HLA-DRB53,CERS4,CAPZB3,PTK2,INPP5D2,PIP4K2A,POLR2G2,KMT2A1,ANKRD13A1,HHEX,BIRC6,TCEA12,GCSAM1,WTAP1,PIKFYVE,SEPTIN92,STX72,RUBCNL2,BTG13,RGS192,AICDA1,FDFT1,ZNF608,MSI21,TNFAIP82,ARPC23,RPRD1B1,POLR1D3,VNN21,RBM5,SMIM201,PXK1,CSNK1A11,GCHFR1,BTF32,CIITA,SKAP21,TNFRSF13C,RAP1A2
A pan-cancer single-cell RNA-seq atlas of intratumoral B cells,39406187,MT1X-high Plasma/Plasmablasts_PMID_39406187,B cell,MT2A1,MT1X1,MT1E,MT1F,IGHG13,IGLV3-13,ZBP12,IGHG33,IGLC23,IGHG43,IGHG23,DUSP52,MIF2,IGKC3,CDKN1A2,SEC61G3,IFI63,PPP2R5C2,GADD45A2,NDUFAF33,FKBP82,CHID12,S100A43,IGHA13,C12orf573,MTRNR2L12,RWDD13,TNFRSF173,H2AC62,STUB12,RHOB2,ST6GALNAC42,PPDPF2,NDUFB43,CUTA2,S100A113,H1-103,S100A102,IGLC32,ATOX13,ATP5MJ3,TMEM2562,ACP13,SSR42,S100A63,SSR32,SRM3,SEC61B3,TCF252,NDUFA15,TMEM2583,GTF2A22,RGS14,SLC35B12,ERH3,PSENEN2,ODF3B1,ATP5MK2,ZBTB8OS2,CHCHD102,EIF3J3,ATP5F1E2,COX7A22,SLIRP2,EIF5B3,KDELR22,VDAC23,UBC2,UQCRB2,RELB4,MANF3,KDELR12,POLR2L2,LGALS32,H1-23,CLTA3,MORF4L22,RBM36,TSC22D32,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD4 T-cell/Effector_PMID_37738975,T cell,AIRE,AQP3,S100P,HPGD,MOSPD3,KLRB1,LTB,CTSH,RASGRP4,FUT7,CDC25B,S1PR4,S100A4,LMO4,NPDC1,ITGB7,LGALS1,CD52,LIMS1,LGALS3,HBEGF,RASGRP2,LIME1,PEPD,GPR15,ITGB1,SYTL1,S100A6,CD59,MIR4435-2HG,SAMD3,NMRK1,CD69,GDE1,ANXA2,TIMP1,EMP3,VSIR,CD79B,PLSCR3,DOK2,PXN,CALHM2,MYO1F,MAF,SLAMF1,UCP2,LY6E,SELPLG,S100A11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD4 T-cell/Memory_PMID_37738975,T cell,TCF7,ARMH1,PLAC8,C1orf162,DHRS3,TMIGD2,CYSLTR1,SCML4,SESN3,PLAAT4,IL7R,LEF1,CD27,LINC01138,TRIM22,TNFSF13B,IFITM1,MAL,CCR7,BEX2,SPINT2,FAM102A,TNFSF8,STAT1,GIMAP7,PIK3IP1,CD38,LRRN3,GBP4,GIMAP1,IL16,FCMR,PDE3B,PTGER2,GIMAP4,ISG20,LGALS3BP,LBH,DNAJC4,TXNIP,IL4R,CD7,PDCD4,PNRC1,PCED1B-AS1,LGALS9,FOXP1,FYB1,ATM,HAPLN3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD4 T-cell/Cytotoxic_PMID_37738975,T cell,GZMA,HOPX,CCL5,GZMK,GNLY,CXCR6,GZMB,LINC01871,IFNG,CTSW,NKG7,PRF1,CXCR3,CST7,ID2,ANXA1,F2R,LINC00892,ALOX5AP,APOBEC3H,PHLDA1,CCR2,TIMP1,CD40LG,LINC01943,HCST,SOCAR,DUSP6,AGTRAP,GLIPR1,TPST2,RBPJ,APOBEC3G,HLA-DRB5,CD96,CD99,GYG1,TNFRSF18,GZMM,PTGER2,CTSC,CD52,SH3BGRL3,TNF,BHLHE40,HLA-DPB1,CD63,IFITM2,HLA-DRB1,ITGB2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,"CD4 T-cell/Memory, not defined_PMID_37738975",T cell,MACF1,VPS13C,NEAT1,GPRIN3,RNF213,SYNE2,PRKDC,PTPRC,DDX17,ITGA4,AHNAK,FLNA,SMCHD1,MALAT1,LBR,IQGAP1,MBNL1,AC004687.1,EML4,CELF2,SON,PRRC2C,SF3B1,STK4,MYH9,FUS,LCP1,HNRNPA2B1,STK17B,CANX,DOCK8,RAB11FIP1,USP15,NKTR,CCNL1,HNRNPU,HSPA5,DYNC1H1,RBM39,ADAM19,ANKRD12,CYTH1,SPTBN1,TNFRSF1B,SLC2A3,ANKRD44,HUWE1,SPTAN1,SOS1,SRSF10,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD4 T-cell/Treg_PMID_37738975,T cell,LRRC32,IL1R2,IKZF2,FOXP3,ADTRP,LGMN,RTKN2,TNFRSF9,CTLA4,IL2RA,CD27,TIGIT,PIM2,ARID5A,FCMR,RGS1,BATF,SATB1,MZB1,LGALS3,LTA,ACP5,TNFRSF1B,SAT1,SPINT2,CD7,POU2F2,HAPLN3,CXCR3,CCR7,ISG20,BIRC3,GBP5,CRTAP,CCR4,TNFRSF4,BTG1,SOCAR,SIRPG,LEPROT,TNFRSF18,EPSTI1,KDM5B,CXCR4,Yescarta,TYMP,CFLAR,GBP2,LINC01943,IFI6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,"CD4 T-cell/Cycling, G1_PMID_37738975",T cell,CDC20,PTTG1,AL118516.1,CCNB2,TROAP,STMN1,CDKN3,BIRC5,CCNB1,HMGN2,HMGB2,HMGB3,SNHG3,TUBA1B,H2AZ1,UBE2S,CENPW,ILF3-DT,NUF2,GGH,LMNA,FABP5,PLK1,LSM5,LSM4,PRR11,ANP32E,MAD2L1,C12orf75,NUDT1,BCL2L12,DLGAP5,H2AZ2,MZT1,TRIP13,DDX39A,HMGB1P5,LDHA,RAN,HMGB1,DTYMK,RUVBL2,SNRPA,HLA-DRA,NOP16,GINS2,CCT5,PTMA,CENPF,PHF19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,"CD4 T-cell/Cycling, G1/S_PMID_37738975",T cell,GJB2,POLR3G,NPM3,PYCR1,PPARG,CENPV,HPDL,FABP5,AP002990.1,UBE2S,SLC29A1,BCAT1,BATF3,LIF,SLC43A3,CDC25A,COPRS,TNFRSF8,GJB6,PSAT1,SORD,CD3EAP,MIR155HG,SCARB1,YBX3,NME1,IMPA2,WDR4,NOP16,FAM216A,PAICS,RCC1,NTRK2,FAH,PBK,FKBP4,RRM2,CDC20,TYMS,GCSH,MTHFD1L,ALDH1B1,UCK2,IL4I1,EIF4EBP1,MYB,MYBL2,CCDC86,CDC45,TRAP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,"CD4 T-cell/Cycling, G2_PMID_37738975",T cell,H2AC14,H1-5,H1-4,H1-3,H1-2,H4C3,TUBA1B,RRM2,HSP90AB1,HSPD1,H2AZ1,PTMA,YBX1,NCL,LDHA,HMGB1,MIF,TXN,NPM1,HNRNPA2B1,H2AC13,H3C2,H2AC16,H2AC17,HMGN2,DUT,UBE2C,STMN1,HSPE1,TYMS,C1QBP,H2AC12,FABP5,RANBP1,H3C8,H2AC11,GSTP1,H3C7,HMGB2,HMGA1,CDK1,IL17F,SNRPD1,HNRNPAB,CCNA2,H3C4,H2BC7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,"CD4 T-cell/Cycling, G1/G0_PMID_37738975",T cell,AC011446.2,H2AC13,AL138963.4,H4C3,H3C3,MXD3,AL133415.1,CDK1,PKMYT1,RRM2,ASF1B,SPC25,KIFC1,UBE2C,ESCO2,H1-4,TOP2A,RAD51AP1,CDCA5,STMN1,TYMS,HJURP,TK1,AURKB,H3C4,WDR34,H3C2,KIF15,FBXO5,ZWINT,H1-5,H2AC12,SPC24,CENPM,SAC3D1,H2AX,KNL1,MND1,GTSE1,PCLAF,NEIL3,KIF22,CDCA3,CKS1B,CKAP2L,LIG1,NCAPH,MKI67,TCF19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD4 T-cell/Th2_PMID_37738975,T cell,PTGDR2,IL13,IL17RB,IL9R,EGLN3,GATA3,NDFIP2,TNFSF10,TIMP1,ITM2C,CAPG,RHBDD2,TNFRSF4,MIIP,PRNP,SRGN,FXYD5,GSTK1,SEC61B,IL32,GMPR2,SSR4,CCNI,NEDD8,IL3RA,IL5,IL10RA,CREM,CLDND1,ERN1,LGALS8,SNHG29,S100A11,CHDH,IL4,NEFL,PPIB,DUSP4,GAS5,MYL6,LGALS1,ALOX5AP,SH3BGRL3,TNFSF11,TNFRSF18,SELENOK,SAT1,SSR2,CD82,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD4 T-cell/Th1_PMID_37738975,T cell,CSF2,CCL3,ZBED2,MIR155HG,PHLDA1,CTLA4,LAG3,ZFP36L1,DUSP4,TNFRSF4,TNFRSF18,CREM,IL2RA,SRGN,SH2D2A,CD2,NFKBIA,CD82,LTA,NR4A1,NAMPT,BATF,BIRC3,PKM,RBPJ,RNF19A,TRAF1,Yescarta,PTPN7,ZBTB32,CD40LG,CFLAR,SLA,EED,LYST,MAP2K3,ICOS,SDC4,CD70,IL2RB,CCL4,SNX9,SLAMF1,ID2,NFKBID,RILPL2,MAP3K8,AL606807.1,EGR3,IFNG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,"CD4 T-cell/Effector, not defined_PMID_37738975",T cell,EPHB6,TRBV30,CD52,LTB,NEAT1,PCED1B-AS1,FXYD5,AQP3,SH3BGRL3,MALAT1,MAL,S100A11,GSTK1,LIMD2,CD3E,HLA-B,S100A4,TXNIP,GABARAP,HLA-E,UCP2,GIMAP4,CORO1B,LINC00861,ITM2B,CD37,EVL,IL7R,ISG20,CD3D,RNASET2,FYB1,CRIP1,SELPLG,GIMAP7,TLE5,RABAC1,DOK2,LAPTM5,ARL4C,CISH,CD27,SPOCK2,RIPOR2,SLFN5,ITGB1,IFITM1,TIMP1,CDC25B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD4 T-cell/TYROBP+ cytotoxic_PMID_37738975,T cell,TYROBP,NKG7,CTSW,GNLY,GZMB,PRF1,FCER1G,KLRD1,CST7,CCL5,KLRK1,TRDC,HOPX,GZMA,KLRB1,XCL1,FCGR3A,KLRC1,XCL2,HCST,CCL4,NCR3,CMC1,MATK,RHOC,CD63,IFITM2,PLEK,CCL3,GSTP1,SH2D1B,GZMH,PTGDR,ID2,SRGN,SLAMF7,IFITM1,ZFP36L1,APMAP,LAT2,AOAH,PLAAT4,CLEC2B,LYST,HAVCR2,CLIC3,HLA-C,CD300A,CD7,TRBC1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD8 T-cell/CX3CR1+ effector_PMID_37738975,T cell,GZMH,PLEK,CCL5,GNLY,CCL4,GZMK,NKG7,KLRG1,FGFBP2,GZMB,CST7,LAIR2,EOMES,KLRD1,IFNG,HLA-DQA1,CCL3,PRF1,GZMA,HLA-DRB5,HOPX,CCR5,HLA-DQA2,HLA-DRB1,AOAH,HLA-DPB1,HLA-DPA1,IKZF3,LAG3,PLAAT3,HLA-DRA,OASL,FYN,PLAAT4,F2R,HLA-DQB1,ZBTB38,SOCAR,SLAMF7,HLA-DMA,LINC01943,HLA-DMB,HCST,CTSW,IGFLR1,APMAP,GIMAP4,GLIPR1,ITGB2,GZMM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD8 T-cell/Cycling_PMID_37738975,T cell,H4C3,RRM2,SPC25,MXD3,H2AC13,CDK1,H3C3,PKMYT1,UBE2C,ESCO2,KIFC1,H4C6,ASF1B,CDCA5,TYMS,ZWINT,SAC3D1,TOP2A,STMN1,TK1,FBXO5,WDR34,RAD51AP1,H2AX,H3C2,AURKB,H3C4,CENPM,HJURP,KIF15,PCLAF,NEIL3,H2AC12,CDKN2D,SPC24,GTSE1,MELK,H1-5,KIF22,CDKN2C,ANLN,C21orf58,H2AC8,CKAP2L,NCAPH,SKA3,CKS1B,CDCA2,CDCA3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD8 T-cell/Memory_PMID_37738975,T cell,TCF7,SPINT2,ARMH1,PLAC8,CCR7,TMIGD2,CD248,LEF1,C1orf162,BEX2,MAL,REG4,DHRS3,LGALS3BP,CD27,FCER1G,IL7R,STAT1,LRRN3,NELL2,IFITM3,PIK3IP1,CD38,TRIM22,PGGHG,FCMR,FAM102A,GPR155,TXK,LGALS9,ISG20,LINC01138,TNFSF8,HAPLN3,BEX4,GBP4,AQP3,DENND6B,IFITM1,PDE3B,IL4R,TXNIP,C20orf204,PLAAT4,FOXP1,TESPA1,TRABD2A,GBP1,PCED1B-AS1,EPSTI1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,"CD8 T-cell/Cycling, G1_PMID_37738975",T cell,AL118516.1,PTTG1,CDC20,TROAP,SNHG3,CCNB2,HMGN2,STMN1,HMGB3,ILF3-DT,CCNB1,BIRC5,CDKN3,HMGB2,H2AZ1,LSM5,TUBA1B,CENPW,ANP32E,LSM4,DANCR,LINC00892,H2AZ2,NOP16,FABP5,RAN,UBE2S,SNRPA,SDF2L1,HLA-DRA,MANF,DDX39A,ANXA2,LGALS1,DCTN3,MZT1,HLA-DRB1,CCT5,HLA-DPA1,HLA-DRB5,LDHA,MAD2L1,CDK2AP2,HMGB1P5,EBNA1BP2,COX20,NUDT1,HSP90B1,GGH,HSPA5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD8 T-cell/Tissue resident memory_PMID_37738975,T cell,PTGDR2,IL5,GATA3-AS1,EGLN3,IL17RB,FXYD7,TNFRSF18,FOXP3,TNFRSF4,IL13,IL4,IL9R,KRT7,GPAT3,CXCR6,TIMP1,CAPG,GATA3,ITM2C,MIIP,CD82,TNFSF10,SIGLEC17P,MBOAT7,GABARAPL1,NDFIP2,LAT2,OSM,IL10RA,MMP25,PLPP1,CD52,ACP5,ERN1,LGALS3,PRNP,MZB1,LTB,NCF4,NUDT16,TIGIT,LAT,FXYD5,PHLDA1,RHBDD2,LGALS1,SPOCK2,ARID5B,KDM5B,LGALS8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD8 T-cell/Cycling_PMID_37738975,T cell,MACF1,RNF213,NEAT1,CCND2,FLNA,DDX17,MALAT1,PTPRC,MBNL1,MYH9,PRRC2C,FUS,SON,LCP1,ITGAL,ITGA4,PRKDC,SYNE2,DOCK8,AHNAK,STK17B,IQGAP1,KCNAB2,AKNA,DYNC1H1,TLN1,HNRNPU,SF3B1,MTATP6P1,AC004687.1,CELF2,MKI67,HUWE1,NKTR,PRRC2B,VPS13C,SMCHD1,ANKRD44,DOCK10,GPRIN3,EML4,SLC4A7,BIRC6,RBM39,CDK6,ADAM19,CCNL1,ADAR,MYO1G,TNFRSF1B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,"CD8 T-cell/Cycling, M_PMID_37738975",T cell,POLR3G,UBE2C,CDK1,NPM3,PBK,AP002990.1,CENPA,AURKA,PYCR1,CDCA3,KNSTRN,KPNA2,AURKB,UBE2S,BCAT1,CKS2,MTFR2,PSRC1,CKAP2L,KIF23,CCNA2,DEPDC1,CDCA2,TNFRSF8,SLC29A1,PLK1,KIF20A,RRM2,SPC25,HJURP,CENPV,FAM72B,NDC80,NEK2,FAM83D,TRIP13,BATF3,KIF2C,HMMR,MND1,PSAT1,CDC20,SGO2,SORD,HMGB1P10,CCNB1,TTK,ARHGEF39,SLC43A3,GCSH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,"CD8 T-cell/Cycling, G2_PMID_37738975",T cell,H2AC14,H1-5,H1-4,H4C3,HSPD1,TUBA1B,HSP90AB1,YBX1,H2AZ1,PTMA,NCL,LDHA,NPM1,MIF,TXN,HSPE1,RRM2,C1QBP,FABP5,H1-3,DUT,H3C2,H2AC13,H1-2,H2AC16,RANBP1,UBE2C,H2AC17,HMGA1,HNRNPAB,H2AC12,NME1,IL2RA,TYMS,H3C8,PAICS,H3C7,NPM3,TUBA1C,STMN1,H2AC11,IL17F,H2BC7,CDK1,CCNA2,POLR3G,H3C4,H4C5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD8 T-cell/MYC+CD30+_PMID_37738975,T cell,HPDL,POLR3G,NPM3,PYCR1,AP002990.1,CD3EAP,NOP16,BCAT1,FABP5,TNFRSF8,HSPD1,PAICS,CDC20,DANCR,FAM216A,FKBP4,WDR4,NME1,SNHG3,MYC,MRTO4,HSPE1,SLC43A3,GCSH,BATF3,UCK2,SLC29A1,PNO1,ALKBH2,GINS2,CCDC86,POLR3H,RCC1,EBNA1BP2,ELL2,C1QBP,EEF2KMT,DKC1,TRAP1,GNL3,UBE2S,DCTPP1,IMPDH2,PSAT1,IFRD2,RRS1,NDUFAF4,PPAT,TIPIN,DCUN1D5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD8 T-cell/Dysfunctional_PMID_37738975,T cell,CCL4,CCL4L2,CCL3,CSF2,IFNG,GZMB,PHLDA1,LAG3,SRGN,IL2RA,CREM,TNF,SH2D2A,TNFRSF9,HOPX,MIR155HG,NKG7,DUSP4,LYST,CCL3L1,ZFP36L1,CST7,XCL1,PTPN7,IL13,CD70,ZBTB32,CD2,BIRC3,NAMPT,ZBED2,RILPL2,NFKBIA,FASLG,Yescarta,LTA,PKM,SLA,LINC00892,BHLHE40,FAM3C,IER3,RNF19A,ID2,CCL5,CDK6,NDUFV2,MAP2K3,EGR2,TIGIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD8 T-cell/NK-like_PMID_37738975,T cell,TYROBP,TRDC,FCER1G,KLRB1,GNLY,KLRD1,NKG7,PRF1,CST7,CTSW,FCGR3A,HOPX,SRGN,GZMB,XCL2,MALAT1,XCL1,HCST,CCL5,IFITM2,GSTP1,KLRC1,RHOC,ZFP36L1,TNFRSF18,PTGDR,PLEK,CD63,CMC1,HLA-C,NCR3,KIR2DL4,TRBC1,GZMH,IFITM1,SH2D1B,GZMA,CCL4,HLA-E,APMAP,HLA-B,KLRF1,HLA-A,CD7,MATK,CD247,PLAAT4,AOAH,IL2RB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,CD8 T-cell/S100+_PMID_37738975,T cell,S100P,S100A11,S100A6,S100A4,LTB,CD52,TMSB10,LGALS1,IL32,EMP3,TIMP1,FXYD5,LIMD2,ANXA2,PRDX1,S1PR4,SELL,NEAT1,SELPLG,H2AC14,IL9R,HPGD,LGALS3,AIRE,CAPG,IL17RB,GPR15,TLE5,EGLN3,ISG20,Yescarta,MAL,SPOCK2,GATA3,RASGRP2,MIR4435-2HG,ATOX1,PTGDR2,DOK2,MOSPD3,TNFRSF4,AQP3,RABAC1,CCR3,C4orf48,ICAM2,ITGB1,MGST3,IL3RA,LIME1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell atlas of CD19 chimeric antigen receptor T cells,37738975,"CD8 T-cell/Memory, not defined_PMID_37738975",T cell,FXYD2,SELL,TMSB10,LRRN3,MPC2,ARHGDIB,PFN1,FDX1,DUSP4,NT5E,S1PR1,CLIC1,BCL2L15,TSPO,CALM3,TMSB4X,LIMD2,ANXA4,MCUB,SAT1,SEPTIN6,HAVCR2,FCER1G,PTGER2,GPX4,RNF149,CTSC,CDCA7,TIMP1,LCK,TUBA4A,NAPA,TRAC,HMGN2,DPP4,ITM2C,ACTN1,DUSP6,RAC2,MYL12A,SINHCAF,CHST12,GLRX,MGLL,SELENOH,FLOT2,STRADB,CARHSP1,LY6E,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analyses reveal evolution mimicry during the specification of breast cancer subtype,38855191,T cell/Naïve  signature_PMID_38855191,T cell,CCR7,TCF7,LEF1,SELL,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analyses reveal evolution mimicry during the specification of breast cancer subtype,38855191,T cell/Cytotoxic signature_PMID_38855191,T cell,PRF1,IFNG,GNLY,NKG7,GZMB,GZMA,HZMH,KLRK1,KLRKB1,KLRD1,CTSW,CST7,CX3CR1,FGFBP2,S1PR5,FCGR3A,PLAC8,C1orf21,TGFBR3,PLEK,FGR,KLRF1,SPON2,CD300A,S1PR1,FAM65B,EFHD2,STK38,C1orf162,SORL1,EMP3,ARL4C,BIN2,CCND3,FCRL6,SAMD3,TRDC,TYROBP,GNLY,KLRG1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analyses reveal evolution mimicry during the specification of breast cancer subtype,38855191,T cell/Exhaustion signature_PMID_38855191,T cell,FCRL3,CD27,PRKCH,ITM2A,TIGIT,ID3,GBP2,PDCD1,KLRK1,HSPA1A,SRGN,TNFRSF9,TMBIM6,TNFRSF1B,CADM1,CD8A,RGS2,FAIM3,EID1,HSPB1,RNF19A,IFI16,LYST,PRF1,STAT1,UBC,CD74,IL2RG,FYN,PTPN6,HLA-DRB1,HNRNPC,UBB,CD8B,HAVCR2,IRF8,LAG3,ATP5B,STAT3,IGFLR1,MGEA5,HSPA1B,COTL1,VCAM1,HLA-DMA,PDE7B,TBC1D4,SNAP47,RGS4,CBLB,TOX,CALM2,ATHL1,SPDYE5,DDX5,SLA,PTPRCAP,IRF9,MATR3,LITAF,TPI1,ETV1,PAM,ARID4B,NAB1,RAPGEF6,LDHA,WARS,RASSF5,OSBPL3,FAM3C,TAP1,HLA-DRB6,FABP5,CD200,CTLA4,SNX9,ETNK1,MALAT1,ZDHHC6,ARL6IP5,DUSP2,HLA-DQB1,HNRNPK,DGKH,LRMP,H3F3B,IDH2,TRAF5,TBL1XR1,ANKRD10,ALDOA,LSP1,PTPN7,NSUN2,RNF149,CD2,SRSF1,GOLPH3,HLA-A,LIMS1,SDF4,ROCK1,EDEM1,APLP2,ITK,TRIM22,SPRY2,ACTG1,HLA-DPA1,EWSR1,SRSF4,ESYT1,LUC7L3,ARNT,GNAS,ARF6,ARPC5L,NCOA3,PAPOLA,GFOD1,GPR174,DDX3X,CAPRIN1,ARPC2,PDIA6,SEMA4A,CSDE1,PSMB9,NFATC1,PTPN11,AGFG1,PCED1B,CCL4L1,CCND2,CCL4L2,CXCR6,AKAP5,IFNG,MIR155HG,ENTPD1,TOX2,CD7,RAB27A,ITGAE,PHLDA1,PAG1,CSF1,NBL1,CCL3,ILRB,FASLG,ZC3H12C,MYO7A,SIRPG,GALNT1,UBE2F,DUSP4,SYT11,TRAC,TNS3,RDH10,PTMS,CXCL13,KIR2DL4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analyses reveal evolution mimicry during the specification of breast cancer subtype,38855191,T cell/Treg signautre_PMID_38855191,T cell,NT5E,CD3D,CD3G,CD3E,CD4,CD5,ENTPD1,CTLA4,IZUMO1R,TNFRSF18,IL2RA,ITGAE,LAG3,TGFB1,LRRC32,TNFRSF4,SELL,FOXP3,STAT5A,STAT5B,LGALS1,IL10,IL12A,EBI3,TGFB1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analyses reveal evolution mimicry during the specification of breast cancer subtype,38855191,DC activation_PMID_38855191,Dendritic cell,FSCN1,BIRC3,LAMP3,CCL19,LAD1,MARCKS,TNFAIP2,CCR7,CCL22,MARCKSL1,EBI3,TNFRSF11B,NUB1,INSM1,RAB9A,LY75,SIAH2,POGLUT1,KDM2B,MGLL,TXN,MLLT6,KIF2A,GRSF1,FAM49A,PLEKHG1,SOCS2,RFTN1,AC009812.4,BMP2K,NAV1,IL7R,ID2,CCL17,PPP1R9B,NRP2,ARNTL2,UVRAG,TXNDC11,MREG,BTG1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analyses reveal evolution mimicry during the specification of breast cancer subtype,38855191,DC migration_PMID_38855191,Dendritic cell,GAL3ST,NUDT17,ITGB8,ADCY6,ENO2,IL15RA,SOCS2,IL15,STAP2,PHF24,ANKRD33B,INSM1,ANXA3,ARHGAP28,RNF115,ADORA2A,EXTL1,SPSB,SLC22A23,RABGAP1,GYG1,DAP,OGFR,GYG2,CCSER2,TMEM123,NET1,GPR52,SLCO5A1,FAH,CLU,PCGF5,SAMSN1,CDKN2B,BMP2K,ZC2HC1A,SERINC5,HIVEP1,CNR1,CNR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analyses reveal evolution mimicry during the specification of breast cancer subtype,38855191,DC tolorgenic_PMID_38855191,Dendritic cell,STAB1,ANXA1,IDO1,IL10,IL27,STAT3,ENTPD1,SOCS2,CCR7,CD274,FTL,IRF1,IRF2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analyses reveal evolution mimicry during the specification of breast cancer subtype,38855191,TAM/M1-like_PMID_38855191,Macrophage,IL23,TNF,CXCL9,CXCL10,CXCL11,CD86,IL1A,IL1B,IL6,CCL5,IRF5,IRF1,CD40,IDO1,KYNU,CCR7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analyses reveal evolution mimicry during the specification of breast cancer subtype,38855191,TAM/M2-like_PMID_38855191,Macrophage,IL4R,CCL4,CCL13,CCL20,CCL17,CCL18,CCL22,CCL24,LYVE1,VEGFA,VEGFB,VEGFC,VEGFD,EGF,CTSA,CTSB,CTSC,CTSD,TGFB1,TGFB2,TGFB3,MMP14,MMP19,MMP9,CLEC7A,WNT7B,FASL,TNFSF12,TNFSF8,CD276,VTCN1,MSR1,FN1,IRF4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk transcriptomics reveals cellular subtypes and molecular features associated with osteosarcoma prognosis,39962461,CD4Tn_PMID_39962461,T cell,MAL,SELL,CAMK4,FLT3LG,RIPOR2,SC5D,RNF125,TCF7,PDE3B,PIK3IP1,CD3E,BCL11B,SMAP2,PDE4B,ARID5A,SATB1,FOXP1,KLF3,LEF1,SNHG8,IKZF1,TMEM243,GIMAP1,SARAF,PABPC1,SF1,TMEM123,SORL1,ADD3,NSMCE3,SOCS1,CYLD,AES,KLF2,FXYD5,NOP53,NOSIP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk transcriptomics reveals cellular subtypes and molecular features associated with osteosarcoma prognosis,39962461,CD4Tm_PMID_39962461,T cell,KLRB1,CD40LG,CD69,TNFRSF25,SPOCK2,TC2N,AQP3,LINC01871,CD52,CD6,CD96,RORA,BTG2,EML4,G3BP2,PTGER4,TNFAIP8,TNFAIP3,ABRACL,TAGAP,CCDC107,FAM107B,TRADD,ERN1,BCL2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk transcriptomics reveals cellular subtypes and molecular features associated with osteosarcoma prognosis,39962461,Treg_PMID_39962461,T cell,FOXP3,TNFRSF18,LINC02195,LAIR2,CTLA4,BATF,TNFRSF4,TIGIT,LINC01943,ICOS,IL2RA,GATA3,CXCR6,TNFRSF9,PIM2,LAYN,ICA1,TBC1D4,STAM,DNPH1,CORO1B,GADD45A,CARD16,GLRX,PMAIP1,HTATIP2,UGP2,PHACTR2,BTG3,CTSC,RAB11FIP1,PRDM1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk transcriptomics reveals cellular subtypes and molecular features associated with osteosarcoma prognosis,39962461,CD8T_PMID_39962461,T cell,CD8A,GZMK,CD8B,CCL5,GZMA,CD27,CD3D,LAG3,CD3G,APOBEC3G,IKZF3,LCK,SRSF7,TUBA4A,SP110,CBLB,CNOT6L,FYB1,SAMD9L,ITM2A,SH2D1A,RNF19A,RARRES3,TBC1D10C,CLEC2D,KIAA1551,OASL,VPS37B,EVL,PPP2R5C,RAB27A,AKAP13,N4BP1,ACAP1,RNF213,ZNF331,APOBEC3C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk transcriptomics reveals cellular subtypes and molecular features associated with osteosarcoma prognosis,39962461,NK_PMID_39962461,NK cell,GNLY,KLRF1,KLRD1,CTSW,GZMB,KLRC1,PRF1,HOPX,KLRC2,XCL2,CD247,PLAC8,EFHD2,C1orf21,CMC1,SAMD3,SYTL3,BIN2,TCF25,CD7,MBP,APMAP,GZMM,MYO1F,TPST2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk transcriptomics reveals cellular subtypes and molecular features associated with osteosarcoma prognosis,39962461,Monocytes_PMID_39962461,Monocyte,S100A8,FCN1,S100A12,CD300E,APOBEC3A,CLEC12A,EREG,CFP,LILRA5,S100A9,AQP9,AC245128.3,C19orf38,CLEC4E,FGR,TNFRSF1B,ZC3H12A,CTSS,G0S2,FOSL2,REL,MXD1,IL1B,RYBP,NFKBIZ,SKIL,BST1,CHD1,TREM1,STX11,C9orf72,ARL5B,VSIR,PPIF,OLR1,GABARAPL1,NR4A1,THAP2,RILPL2,WARS,TNFAIP2,BCL2A1,ASGR1,GPCPD1,SMIM25,STXBP2,RETN,LDLR,PLAUR,C5AR1,FPR1,LILRB3,LILRB2,OSM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk transcriptomics reveals cellular subtypes and molecular features associated with osteosarcoma prognosis,39962461,Mph_PMID_39962461,Macrophage,C1QA,C1QB,C1QC,MS4A7,FCGR2A,MSR1,APOC1,MS4A4A,FOLR2,RNASE1,TREM2,STAB1,CD163,CCL3,GLUL,MERTK,CXCL3,CXCL2,DAB2,SELENOP,IQGAP2,LTC4S,AIF1,C2,SGK1,GPNMB,VSIG4,CTSB,CTSL,NINJ1,ABCA1,AP2A2,CTSD,MS4A6A,SLCO2B1,PSAP,RB1,LPAR6,LGMN,IGSF6,MAF,CXCL16,VMO1,ADAP2,CCL2,CCL4,CCL3L1,FCGBP,APOE,FPR3,LAIR1,AP1B1,HMOX1,ITGB2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk transcriptomics reveals cellular subtypes and molecular features associated with osteosarcoma prognosis,39962461,DCs_PMID_39962461,Dendritic cell,FCER1A,CD1C,CLEC10A,CD1E,LGALS2,PKIB,JAML,PLD4,HLA-DRB5,HLA-DQA1,DAPP1,HLA-DQB1,FCGR2B,P2RY13,HLA-DQA2,SH3BGRL3,PEA15,RGS18,RGS2,PID1,RBPJ,RAB32,CPVL,CSF2RA,CXorf21,KLF4,LMO2,IL18,DDX21,PPA1,C12orf45,ALDH2,NDRG2,ARF6,SAMHD1,HCST,SPINT2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,aDCs_PMID_36311764,Dendritic cell,CD83,LAMP3,CCL1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,B_cells_PMID_36311764,B cell,BACH2,BANK1,BLK,BTLA,CD79A,CD79B,FCRL1,FCRL3,HVCN1,RALGPS2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,CD8+_T_cells_PMID_36311764,T cell,CD8A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,DCs_PMID_36311764,Dendritic cell,CCL17,CCL22,CD209,CCL13,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,iDCs_PMID_36311764,Dendritic cell,CD1A,CD1E,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,Macrophages_PMID_36311764,Macrophage,C11orf45,CD68,CLEC5A,CYBB,FUCA1,GPNMB,HS3ST2,LGMN,MMP9,TM4SF19,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,Mast_cells_PMID_36311764,Mast cell,CMA1,MS4A2,TPSAB1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,Neutrophils_PMID_36311764,Neutrophil,EVI2B,HSD17B11,KDM6B,MEGF9,MNDA,NLRP12,PADI4,SELL,TRANK1,VNN3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,NK_cells_PMID_36311764,NK cell,KLRC1,KLRF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,pDCs_PMID_36311764,Dendritic cell,CLEC4C,CXCR3,GZMB,IL3RA,IRF7,IRF8,LILRA4,PHEX,PLD4,PTCRA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,T_helper_cells_PMID_36311764,T cell,CD4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,Tfh_PMID_36311764,T cell,PDCD1,CXCL13,CXCR5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,Th1_cells_PMID_36311764,T cell,IFNG,TBX21,CTLA4,STAT4,CD38,IL12RB2,LTA,CSF2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,Th2_cells_PMID_36311764,T cell,PMCH,LAIR2,SMAD2,CXCR6,GATA3,IL26,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,TIL_PMID_36311764,T cell,ITM2C,CD38,THEMIS2,GLYR1,ICOS,F5,TIGIT,KLRD1,IRF4,PRKCQ,FCRL5,SIRPG,LPXN,IL2RG,CCL5,LCK,TRAF3IP3,CD86,MAL,LILRB1,DOK2,CD6,PAG1,LAX1,PLEK,PIK3CD,SLAMF1,XCL1,GPR171,XCL2,TBX21,CD2,CD53,KLHL6,SLAMF6,CD40,SIT1,TNFRSF4,CD79A,CD247,LCP2,CD3D,CD27,SH2D1A,FYB,ARHGAP30,ACAP1,CST7,CD3G,IL2RB,CD3E,FCRL3,CORO1A,ITK,TCL1A,CYBB,CSF2RB,IKZF1,NCF4,DOCK2,CCR2,PTPRC,PLAC8,NCKAP1L,IL7R,44445,CD28,STAT4,CD8A,LY9,CD48,HCST,PTPRCAP,SASH3,ARHGAP25,LAT,TRAT1,IL10RA,PAX5,CCR7,DOCK11,PARVG,SPNS1,CD52,HCLS1,ARHGAP9,GIMAP6,PRKCB,MS4A1,GPR18,TBC1D10C,GVINP1,P2RY8,EVI2B,VAMP5,KLRK1,SELL,MPEG1,MS4A6A,ARHGAP15,MFNG,GZMK,SELPLG,TARP,GIMAP7,FAM65B,INPP5D,ITGA4,MZB1,GPSM3,STK10,CLEC2D,IL16,NLRC3,GIMAP5,GIMAP4,IFFO1,CFH,PVRIG,CFHR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Integrated analysis of single-cell and bulk RNA-sequencing identifies a signature based on T-cell marker genes to predict prognosis and therapeutic response in lung squamous cell carcinoma,36311764,Treg_PMID_36311764,T cell,IL12RB2,TMPRSS6,CTSC,LAPTM4B,TFRC,RNF145,NETO2,ADAT2,CHST2,CTLA4,NFE2L3,LIMA1,IL1R2,ICOS,HSDL2,HTATIP2,FKBP1A,TIGIT,CCR8,LTA,SLC35F2,IL21R,AHCYL1,SOCS2,ETV7,BCL2L1,RRAGB,ACSL4,CHRNA6,BATF,LAX1,ADPRH,TNFRSF4,ANKRD10,CD274,CASP1,LY75,NPTN,SSTR3,GRSF1,CSF2RB,TMEM184C,NDFIP2,ZBTB38,ERI1,TRAF3,NAB1,HS3ST3B1,LAYN,JAK1,VDR,LEPROT,GCNT1,PTPRJ,IKZF2,CSF1,ENTPD1,TNFRSF18,METTL7A,KSR1,SSH1,CADM1,IL1R1,ACP5,CHST7,THADA,CD177,NFAT5,ZNF282,MAGEH1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,Macrophage_PMID_34653364,Macrophage,HLA-DRA,MARCO,CD163,CD200R1,HLA-DRB5,SOCS3,CCR1,MSR1,TLR1,CSF1R,TLR4,TGM2,CD86,MRC1,HLA-DRB3,TNFRSF6B,TLR8,CD14,IDO1,CD68,VEGF,LY75,HLA-DRB4,HLA-DRB1,IL1R1,TLR2,CD80,SOCS1,FCGR1A,NOS2,CXCL10,IL1R2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,Monocyte_PMID_34653364,Monocyte,G0S2,GNLY,ASAH1,LIPA,NEAT1,CXCR1,IL2RB,FGFBP2,CXCR2,PRF1,S100A8,GZMA,CD14,S100A9,AL137655,NAMPT,CSF3R,FCN1,TSPAN14,ITGAM,LAIR2,CTSW,VCAN,APOBEC3A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,DC_PMID_34653364,Dendritic cell,NRP1,CD1C,PPP1R14A,AIF1,ITM2C,ADAM8,CLEC10A,CD1D,FCGR2B,TMEM176B,SERPINF1,CAMK2D,CLEC4F,LILRB2,CLEC9A,S100A8,LOC200772,CD22,GZMB,SIGLEC6,IDO1,S100A9,FCGR3A,RNASE2,CADM1,C1ORF54,AXL,SERPINA1,CLEC4C,XCR1,IGJ,AK128525,TCF4,LST1,SIGLEC1,VCAN,FCER1A,CD5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,Mast_PMID_34653364,Mast cell,ENPP3,KIT,CMA1,MS4A2,TPSAB1,TPSB2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,NK_PMID_34653364,NK cell,NCAM1,NCR1,NKG7,KLRC1,KLRC2,KLRD1,KLRK1,KLRC3,KLRC4,GNLY,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,Neutrophil_PMID_34653364,Neutrophil,ITGAX,ANPEP,FUT4,CSF3R,FCGR3A,CD33,SELL,CD63,CEACAM1,CEACAM3,CEACAM6,CEACAM8,CD68,THBD,MPO,DEFA1,DEFB1,DEFB2,DEFB3,LYZ,CD24,TLR1,TLR4,CD69,PRV1 S100A8 S100A9 ADGRG3 IL1R2 MXD1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,B cell_PMID_34653364,B cell,CD19,MS4A1,CD79A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,Plasma cell_PMID_34653364,B cell,CD79A,SDC1,MZB1,CD27,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,T cell_PMID_34653364,T cell,LAG3,CTLA4,IL22,IL21R,IL6R,CD28,CCL15,IZUMO1R,IL2RA,CD3E,IL25,STAT3,IRF4,STAT4,RORA,IL17D,NT5E,CD4,CD8B,PRF1,IL17RE,CD40LG,SPI1,IL2,IL17F,LGALS1,TGFB2,IL17C,IFNA1,IL12B,CCR2,TGFB3,IL18R1,IL4,CCR4,SELL,CD70,TRGC2,SLAMF1,IL5,KLRK1,LY9,TNFA,GATA3,TRGC1,CD84,ENTPD1,CCR5,CCL5,IL17RB,IL10,IL1R1,BCL6,IL6,TRDC,STAT6,MAF,ITGAE,GNLY CST7 CTSW CCL5 CD7,CLEC7A,IL17RC,IL18,CD247,IL9,CD5,PDCD1,IL17RA,IL4R,TNF,SOCS3,CCR3,IL23A,IL23R,IL27RA,SOCS5,GZMA,IL3,CEBPB,IL21,SLAMF6,IKZF2,IL17A,IL27,RUNX1,CXCR5,IL4RA1,CCL7,IL1RL1,IL1B,SOCS1,CCR10,CD3G,TNFRSF4,CD2,IL2RG,TRAF6,GZMB,IL13,FOXP3,CCR7,IL12A,CXCR3,LRRC32,TGFB1,IL7R,CD3D,STAT5A,CXCR4,STAT5B,TBX21,TGFBR2,CCR6,CCL11,CD8A,IFNG,TNFRSF18,CD80,RORC,SLC11A1,BATF,CD27,EBI3,IFNB1,S1PR1,ICOS,KLRB1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,NKT_PMID_34653364,T cell,GNLY,PFN1,GZMA,GZMB,GZMM,GZMH,CD2,CD3E,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,cDC_PMID_34653364,Dendritic cell,CD1C,CD8A,ITGAM,ITGAX,ITGAE,LY75,HLA-DRB1,HLA-DRA,HLA-DRB4,HLA-DRB3,HLA-DRB5,CD40,CD80,CD83,CCR7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,pDC_PMID_34653364,Dendritic cell,CLEC4C,NRP1,IL3RA,LILRA4,TLR7,TLR9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,CD8+ T-cells_PMID_34653364,T cell,CCL4,CST7,GZMA,GZMH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,CD8+ T exhaustion_PMID_34653364,T cell,CTLA4,LAG3,PTMS,PDCD1,TIGIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,CD8+ T memory-like_PMID_34653364,T cell,CD44,GZMK,IL7R,CD69,CD27,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,CD8+ T effector-like_PMID_34653364,T cell,CTSW,PRF1,GZMB,FGFBP2,FCGR3A,TRGC2,GNLY,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,Tgd_PMID_34653364,T cell,TYROBP,FCER1G,CMC1,KLRD1,KLRG1,KLRF1,TRDC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,IPF Monocyte_PMID_34653364,Monocyte,S100A12,S100A9,S100A8,VCAN,FCN1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,IPF Profibrotic Mφ_PMID_34653364,Macrophage,LIPA,LPL,FDX1,SPP1,SPARC,MATK,GPC4,PALLD,CHI3L1,CHIT1,CTSK,MMP9,MMP7,CSF1,FCMR,TIMP3,COL22A1,SIGLEC15,CCL22,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer",34653364,IPF associated Mφ_PMID_34653364,Macrophage,CD99,FN1,ANXA1,S100A6,S100A11,KLF6,POLR2L,HLA-DRA,LPL,SCGB1A1,TSC22D3,FTL,S100A10,MARCO,CD9,SPP1,CD74,CCL18,CPM,GPX1,ENSG00000273269,PPDPF,EMP3,CFL1,ANXA2,GABARAP,APOC1,NME1-NME2,CBLB,MIR1244-2,FKBP5,FDX1,YBX1,ELOB,GLUL,ANKRD28,SRP14,HLA-DPB1,ENSG00000264772,SCGB3A1,ATP6V1F,FABP5P7,ATP5F1E,SH3BGRL3,CYBA,ACTG1,CTSZ,ZBTB16,CHCHD2,VIM,HSPB1,TMSB4X,S100A4,CST3,SERF2,HLA-DPA1,TAGLN2,GSN,COX7A2,MYL6,RHOB,DBI,CSTB,ZFAND5,SLC1A3,TYROBP,ENSG00000274322,GNG5,PFN1,VAMP8,FBP1,FABP5,ENSG00000263809,OAZ1,SGK1,ENSG00000268173,HLA-DRB1,RGCC,LGALS1,SMIM25,LGALS3,MT2A,STX3,CD63,FAU,TMSB10,GPNMB,EMP1,UBA52,NPC2,TXN,CD52,CRIP1,APOE,C9,LIPA,HLA-DRB5,TXNIP,PTMA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_0_PMID_38969631,Macrophage,FABP4,MCEMP1,CD52,CES1,MARCO,GCHFR,FBP1,ALDH2,INHBA,PDLIM1,RETN,TREM1,RBP4,S100A6,LGALS3,LTA4H,RGCC,SFTPC,TSPO,S100A4,SERPING1,UBB,GLIPR2,STXBP2,MGST3,CD9,S100A13,CYP27A1,ACP5,GLRX,SERPINA1,CRIP1,ALOX5AP,RND3,PPARG,LPL,PCOLCE2,PHLDA3,AKR1C3,PLAAT3,AQP3,GPD1,CSTA,ANXA1,MGST1,TXN,NOP10,FHL1,DEFB1,RP11-598F7.3,GSTO1,RP5-839B4.8,CCL18,IFI27,MSR1,BBLN.1,S100A10,PNPLA6,MRC1,SCD,PLBD1,FABP5,APOC1,MME,LGALS3BP,PELATON,HPGD,DECR1,TGM2,SCGB1A1,PPIC,ANXA2,C1orf162.1,NUPR1,RMDN3,ALOX5,ACOT7,VSIG4,SNX10,AGRP,FN1,LYAR,SPN,MYL12A,HDDC2,ELOB,FTH1,SEPTIN11,S100A11,TMSB4X,SVIL,ARL4A,LY6E,MIR3945HG,TAGLN2,RHBDD2,TNNI2,C1QA,CYB5A,MYL6,RP11-1143G9.4,TFRC,APIP,LRPAP1,FAM89A,MDH1,LDHB,NMB,OLR1,TCF7L2,ALDH1A1,BSG,ECH1,GRN,SCCPDH,FTL,ABHD5,ATP5MJ.1,OASL,NDUFS5,SGMS2,LSM6,PSMA7,TRIR.1,CSTB,SNX3,GLDN,RTN4,ADTRP,CARD16,RAB11FIP1,DOK2,HEXB,SMIM30,ABCG1,GMFG,EVL,AMIGO2,COMT,CYBA,MICOS13.1,CTSC,PTPMT1,LMNA,TRPV2,OAZ1,SNX2,COX17,JAML,ETHE1,SNHG32.1,CNIH4,FDX1,ADAM17,BLVRA,ADAMTSL4,MTPN,GYPC,C20orf27.1,SCP2,ACO1,PSMA4,EVI2B,YBX1,VMO1,S1PR4,AGPAT2,C1QB,VPS29,VIM,ANKRD28,CD151,ATP1B1,ENPP4,ZBTB8OS,OSCAR,PECAM1,POR,POLR2K,NDUFA4,TBC1D10C,LAMP2,GCA,GPCPD1,DYNLL1,PEBP1,PYCARD,CAT,NCEH1,CD63,DMAC1,SLC27A3,CALM2,VASP,BLOC1S2,PRR13,KAT8,BHLHE41,ATP5MC3,VAMP8
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_1_PMID_38969631,Macrophage,SELENOP,SLC40A1,F13A1,RNASE1,FOLR2,PLTP,STAB1,PDK4,LGMN,DAB2,MS4A6A,MS4A4A,MAF,RBPJ,CD163,SLCO2B1,CCL18,FUCA1,C1QC,GPR34,MS4A7,CFD,IGF1,LILRB5,A2M,C1QA,FCGRT,MPEG1,PLD3,MRC1,CSF1R,MTSS1,AP2A2,RNASE6,FRMD4B,FGL2,C1QB,BLVRB,CD14,ITM2B,TMEM176B,NRP1,MAFB,RGL1,SNX6,CPM,MERTK,CST3,ARL4C,CD74,TMEM176A,FOSB,SDC3,ITPR2,FOS,FCGR2A,KCTD12,KLF2,ADAP2,CEBPD,HLA-DPA1,HERPUD1,TSPAN4,CD4,AP1B1,GAS6,SIGLEC1,MARCKS,CPVL,GADD45B,NAIP,IQGAP2,EGR1,MFSD1,CREG1,NR4A2,AKR1B1,FKBP5,EPHX1,CTSC,PMP22,HLA-DMA,CD302,TTYH3,LPAR6,HLA-DPB1,CTSZ,CD93,C3AR1,ABCA1,LY96,LTC4S,HLA-DMB,BMP2K,RB1,HLA-DRB1,FCHO2,ARHGAP18,SNX9,ZFHX3,C2,SMAP2,TSC22D3,NCOA4,CD84,EPS15,NCF4,MEF2C,ZNF331,GYPC,AIF1,QKI,FPR3,FRMD4A,HLA-DQA1,SEC14L1,PSAP,RGS2,RASSF4,HLA-DOA,CLTC,JUN,TBXAS1,CD59,SPRED1,HLA-DRA,LIPA,HLA-E,PLXND1,PRNP,DRAM2,HLA-DRB5,SLC1A3,RHOB,HCLS1,TCF4,NPC2,NPL,ALDH1A1,CREBL2,ZFP36L2,IDH1,RBM47,RGS10,LRP1,TPP1,TGFBR2,RNF130,CRYL1,TIMP2,KLF6,ZFP36L1,FOXO3,AHR,FNBP1,ARHGAP4,DAPK1,RAP2B,RGS1,TPT1,GLIPR1,FOXN3,APOE,CREM,FYB1,AOAH,AKAP13,MCOLN1,TNFRSF1A,AHNAK,CTSB,GPNMB,ADA2,JUNB,LAIR1,CELF2,WASF2,EPB41L3,RCSD1,GOLGA4,HLA-DQB1,SH2B3,RAB31,FEZ2,TXNIP,MARCHF1,PREX1,HNMT,KLF4,ZFAND5,ZFP36,CYBB,ANKRD12,NINJ1,IL10RA,CAPZB,ASAH1,CD68,ZEB2,EPB41L2
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_2_PMID_38969631,Macrophage,C3,PLD4,RGS1,HLA-DPA1,CX3CR1,CD74,HLA-DPB1,HLA-DRB5,OLFML3,HERPUD1,GPR34,BIN1,HLA-DQB1,CEBPD,HLA-DRB1,RGS10,FOS,HLA-DQA1,IFNGR1,VSIR,SGK1,LTC4S,ZFP36L2,TMIGD3,IER2,RNASET2,HLA-DQA2,C1QC,TREM2,CSF1R,MEF2C,HLA-DRA,ITM2B,A2M,BTG2,MS4A6A,RNASE6,CST3,LPAR6,CORO1A,YWHAH,HLA-DMB,HLA-DMA,JUNB,CXCR4,CPVL,VSIR.1,P2RY13,ZFP36,CSF2RA,ARL5A,SORL1,FGL2,OTULINL,ADORA3,ID2,GPX1,IL18,FCGR1A,HCLS1,DUSP1,ZFP36L1,APBB1IP,LY86,LAT2,CNPY3,FCGR3A,ADAM28,C3AR1,EIF3L,C1QB,HLA-DOA,ABI3,TSC22D3,DHRS7,AXL,CALHM6,SERPINF1,FCGR2B,EPB41L2,TBXAS1,SIGLEC10,JUN,LILRB4,TM6SF1,CD37,LPCAT2,SCAMP2,GLIPR1,EIF3F,RHOB,PPA1,GIMAP4,FYB1,BHLHE41,AKR1B1,FXYD5,RHOG,POU2F2,EEF2,PTGS1,ARHGAP24,TMEM109,HLA-E,RACK1,ENTPD1,RGS2,NUDT3,ARHGDIB,GABARAP,CD14,NACA,GAL3ST4,SARAF,LIMD2,POLD4,APMAP,PAK1,FPR1,RGS19,EGR1,MAN2B1,CIRBP,RB1,SLC1A3,GSN,CD300A,RASSF4,CCL3L3,TMEM176B,SPINT2,ARL6IP5,CTSH,PRPF38B,MEF2A,SVBP,APEX1,SYNGR2,ERCC1,PPT1,ADAP2,IL13RA1,NPC2,WAS,NAP1L1,HAVCR2,FCGR1BP,AIF1,RCSD1,EIF3G,CAPZB,CYRIB,OXA1L,PCBP2,TMEM14C,RAB32,AOAH,PNISR,HNRNPA1,METTL7A,COMMD6,NOP53,BST2,CKLF,PABPC1,SLC25A6,SH3KBP1,SELPLG,C1QA,MGAT4A,CCL3,GPSM3,UBXN1,ATP5MC2,SEC11A,IFI16,CSF3R,BTF3,STING1,AC090498.1,PTAFR,TNFAIP8L2,OGFRL1,EIF4A1,MIF4GD,FCGR2A,INPP5D,CD53,PEA15,PGLS,MGST2,PDK4,CORO1B,CCNH,CLNS1A,TMEM9B,DDX5,NUDT16,MARCKS,NR4A2
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_3_PMID_38969631,Macrophage,SPP1,RNASE1,NUPR1,TREM2,MIF,RNASET2,PLIN2,ADM,TMIGD3,LDHA,CSTB,GPNMB,SLC2A5,CTSB,SLC2A3,CD14,ERO1A,IFI6,APOE,ENO1,LGALS1,HTRA1,PLTP,BIN1,CTSL,TPI1,HMOX1,IL4I1,CTSD,SLC16A3,PGK1,C4orf3,RALA,FCGR1A,ISG15,ALDOA,ATF5,C3,RGS1,OLFML3,PKM,GRB2,LAPTM5,A2M,P4HA1,LSP1,ABCA1,SLC11A1,CD300A,CYFIP1,LILRB4,LHFPL2,LIMS1,MALAT1,ARL4C,FTL,APOC1,MPC2,LGMN,IFI27,ALOX5AP,HM13,BCAT1,BNIP3L,HIF1A,GPI,VKORC1,FABP5,TMEM51,EIF4EBP1,IGKC,FAM162A,GPX1,DHRS3,TGFBI,CREG1,NPC2,PTTG1IP,CALM3,DHRS7,FCGR2B,ITGB2,MARCKS,SCD,SELENOH,ADAM9,C15orf48.1,ID2,MMP14,TGFBR1,NINJ1,DDIT4,IFI44L,HAVCR2,FCGR3A,GPR34,CD63,ALCAM,FNIP2,NPL,CAPG,SLC43A3,CD81,BCAP31,VSIG4,ATP6V1F,CALM1,P4HB,LIPA,CARD19,APLP2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_4_PMID_38969631,Macrophage,APOE,APOC1,CCL18,GPNMB,CTSD,LIPA,LGMN,PLA2G7,TREM2,PSAP,ACP5,PLD3,SDS,GM2A,FTL,OTOA,ASAH1,FUCA1,DNASE2,CD9,NUPR1,CTSZ,A2M,LGALS3,AKR1B1,CAPG,CTSB,CPM,CFD,CD68,IGSF6,CYP27A1,ALDH1A1,CSTB,HLA-DMB,CD59,GPX1,C3,C1QC,CTSA,NPL,NPC2,TSPAN4,CD63,CTSL,GCHFR,LILRB4,FABP5,IFI30,VAT1,CREG1,MGLL,PRDX1,PLTP,GRN,HLA-DMA,CD81,LAMP1,CD74,CTSS,ABHD12,CD84,TMEM176B,SMS,MTRNR2L8,HEXA,DBI,HLA-DPB1,SCPEP1,ATOX1,SCD,MFSD1,TCN2,HEXB,ACP2,ATP6V1F,ATP6V0C,HLA-DPA1,LRPAP1,C1QB,GLMP,ADA2,GAL3ST4,BRI3,HLA-DRB5,FXYD5,SLC15A3,DAB2,JPT1,CHCHD10,FDX1,GNB4,DPP7,MPP1,BCAP31,AKR1A1,RAB32,TMEM176A,LY96,GLUL,BLVRB,ARL5A,PMP22,RNF130,SYNGR2,MARCKS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_5_PMID_38969631,Macrophage,HSPA6,HSPA1B,HSPA1A,DNAJB1,HSPB1,BAG3,HSPH1,HSP90AA1,ZFAND2A,HSPD1,HSPE1,IER5,JUN,DNAJA4,UBC,RHOB,HSPA8,HSP90AB1,PPP1R15A,DDIT4,NR4A1,RGS2,GADD45B,SERPINH1,DNAJA1,CACYBP,FKBP4,DNAJB4,CLK1,FOS,DUSP1,TSPYL2,G0S2,ATF3,CKS2,TENT5A,ANKRD37,EGR1,IER2,KLF2,ID3,EIF4A3,CHORDC1,DNAJB6,HERPUD1,CDKN1A,ADM,IFRD1,MTRNR2L12,HMOX1,SGK1,SQSTM1,NR4A2,FOSB,GABARAP,CXCR4,GLA,MAFB,JUNB,KLF6,AC090498.1,CD83,SLC2A3,DUSP2,TCP1,H3-3B,RGS1,TRA2B,ATP6V0C,ZFP36,HSPA5,BCAS2,BTG2,AHSA1,ZFP36L1,ID2,SRSF7,DDIT3,CCL4,TIMP1,C3,CEBPD,HLA-DRB5,ZFP36L2,MIF,PTGES3,SNAP23,REL,IFITM2,WSB1,PLD4,SAT1,PMAIP1,IFITM3,KLF4,CCT4,CORO1A,BTG1,CHMP1B,NEU1,SNHG12,MAP1LC3B,EIF5,INSIG1,DEDD2,CD69,TAGAP,UBB,POLD4,SLC38A2,STIP1,VSIR.1,ZNF331,ZC3HAV1,MXD1,TSC22D3,PTP4A1,CITED2,CALHM6,MALAT1,NFKBIZ,SERTAD1,SLC25A37,SLC3A2,COTL1,SNHG8,PLIN2,C1orf162,FXYD5,HSPA4,EIF4A2,IRF1,CD74,GPBP1,IER3,RIPK2,SOD2,LDHA,DNTTIP2,LIMD2,TPI1,JMJD6,LSP1,PPIF,PHACTR1,CLEC2B,CSRNP1,CCNL1,EIF4A1,PCBP2,SOCS3,C4orf3,CCNH,ARF5,YPEL5,CD300A,PEA15,FCGR2B,FCGR2A,CNPY3,UPP1,SERP1,BHLHE40,NR4A3,AFF4,CCL3,MGAT1,JUND,MAT2A,WAS,DOK2,FUS,GNA15,NUDC,BRD2,GPX1,P4HA1,FGL2,NME2,YME1L1,PPP1R10,RSRP1,CSF3R,HCLS1,RGS10,EIF1,RNASEK,NACA,IRF7,TNFSF13,CD37,TAF1D,,,,,,,,
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_6_PMID_38969631,Macrophage,CCL20,CXCL3,IL1B,CXCL2,CXCL8,EREG,G0S2,TIMP1,BCL2A1,SOD2,IL1RN,AREG,TNF,NFKBIA,CCL3,PLAUR,CCL3L3,IL1A,CCL4,PTGS2,THBS1,IER3,CCL4L2,NLRP3,TNFAIP3,DUSP2,PNRC1,MIR155HG,PHLDA1,C15orf48.1,BTG1,ICAM1,NFKBIZ,VCAN,PLIN2,MMP19,PPP1R15A,INHBA,NAMPT,PIM3,THAP2,AQP9,CD83,OLR1,SRGN,KDM6B,GPR183,PPIF,NFKB1,ABL2,FTH1,C5AR1,CCRL2,CD44,WTAP,GK,CDKN1A,NINJ1,TREM1,RGCC,MIR3945HG,ETS2,ZC3H12A,SAMSN1,CHMP1B,THBD,BASP1,LUCAT1,EHD1,CTSL,SERPINB9,SPP1,UPP1,CREM,ATP2B1,SLC25A37,HBEGF,MT2A,SLC2A3,VEGFA,PLEK,MAP3K8,MXD1,ATP2B1-AS1,CD55,NR4A3,CFLAR,SELENOK,AC090498.1,VIM,INSIG1,TNFAIP8,ANPEP,STX11,MAFF,PMAIP1,FOSL2,SDC4,SOCS3,RETN,OSM,MIF,REL,SERTAD1,MAP2K3,NFE2L2,BIRC3,ALDOA,PNP,XBP1,ATP13A3,RILPL2,LDHA,SAT1,EIF4E,PHLDA2,MCL1,KYNU,S100A8,RIPK2,CSRNP1,SLC7A5,BNIP3L,CEBPB,ATP1B3,ZNF267,ADM,PDE4B,SLC16A10,EIF1B,NR4A1,PPP1R15B,CLEC5A,PELATON,SPHK1,TPI1,NFKB2,PGK1,ELL2,TNFAIP2,SDS,S100A10,MCEMP1,EGR1,ZFP36,IL7R,S100A9,FLNA,PLK3,ALOX5AP,ERO1A,PNRC2,ANXA5,SLC11A1,MARCO,OTUD1,PDE4DIP,TGIF1,HIF1A,BZW1,DUSP6,ANXA1,EIF1,IVNS1ABP,TNIP1,CSTB,ACSL1,STXBP2,LITAF,PNPLA8,CLEC4E,FOSB,PFKFB3,FCGR2B,FN1,LIMS1,NFKBID,B3GNT5,H3-3B,BTG3,NR4A2,ZFAND5,SDCBP,TNFRSF1B,BHLHE40,RASGEF1B,ARL8B,TUBA1C,NFKBIE,PTPRE,ENO1,PLSCR1,CYTOR,SEC61G,NEAT1,BID,LMNA,VMO1,RNASEK,CHMP4B
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_7_PMID_38969631,Macrophage,CCL2,CCL8,CCL4L2,SPP1,CCL3L3,CCL4,CCL3,CTSL,TNF,RNASE1,PLAU,CTSB,CD14,CXCL8,IER3,EGR2,FOLR2,EGR1,FCGR2A,CXCL2,IFI30,STAB1,IL1B,ZFP36L1,TGFBI,TUBA1C,HMOX1,LGALS1,BCL2A1,F13A1,FABP5,CLEC5A,ISG15,CD83,CCR1,CTSZ,CTSD,OTUD1,CXCL3,PMP22,CD93,THBD,KLF6,CSTB,DAB2,CD163,LGMN,ENO1,CALM1,SDF2L1,IFI6,SPRED1,IER2,LDHA,SGK1,SEC61G,NRP1,PLAUR,ME2,CALR,TYMP,DUSP6,PHLDA1,FCGR1A,GLUL,NR4A2,HIF1A,IFI27,PLTP,S100A9,MAF,SLC43A3,PLEK,MARCKS,AP2S1,LHFPL2,ICAM1,FPR3,MANF,HSPA5,BTG2,EIF4E,TPI1,ELOC,FOSB,TPM4,FCER1G,PLIN2,METRNL,NME1,ADM,TTYH3,ETV5,MIF,HCST,ATF5,BRI3,GAL3ST4,PGK1,TIMP1,ADAP2,PDXK,ALOX5AP,HSP90B1,EMP3,PDIA6,RUNX1,SOCS3,KCTD12,PKM,ADAM9,ABL2,HBEGF,IL1RN,LAMP1,TPM3,FCGR3A,PLA2G7,FTL,NR4A1,SLC16A3,SH3BGRL3,YWHAH,PRNP,SELENOK,TRIB1,ATP5ME,POMP,C3AR1,CD63,NINJ1,ID2,PLEKHO2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_8_PMID_38969631,Macrophage,CXCL9,CXCL10,GBP1,MMP9,GBP5,VAMP5,WARS1,STAT1,CALHM6,LGALS2,SLAMF7,GBP4,IL4I1,NCF1,TMEM176B,LYZ,TXN,PLAAT4,ADAMDEC1,TAP1,TMEM176A,C15orf48.1,PSME2,LAP3,ANKRD22,SNX10,PLEK,HLA-DQA2,CD40,TNFSF13B,IRF1,SLAMF8,NR1H3,ATOX1,LILRB4,PRDX1,IL32,PPA1,TYMP,CTSC,PLA2G7,SERPING1,BIRC3,CTSH,PSMB9,CLEC4E,TNFAIP2,HLA-DQA1,CCL18,APOL3,HLA-A,IL7R,GBP2,CTSS,IGSF6,TNFSF10,CD38,SCPEP1,FYB1,PLEKHO1,TFEC,SMCO4,CTSZ,SOD2,NUB1,FGL2,TCN2,DRAM1,EPSTI1,RASSF4,PSTPIP2,VOPP1,ACP2,HLA-F,ATF5,HLA-DMB,CD48,KCNMA1,HLA-DQB1,IL18,CYBB,PARP14,TAPBP,UBE2L6,AOAH,ALDH1A1,CLEC10A,HLA-DRA,KYNU,HLA-B,AKR1A1,NBN,ACP5,TSC22D1,GM2A,IL2RG,RNF213,PLD3,C2,HLA-C,PSAP,TSPAN4,UBE2E2,RP11-1143G9.4,FUCA1,PTAFR,APOE,ICAM1,SELENOS,UBE2D1,C1orf54.1,SQOR,PSMB8,HLA-DRB5,PTPN1,RDX,ADA2,CMKLR1,LILRB2,HLA-DPB1,CD44,CAPG,PDIA3,LIPA,SAMD9L,IFI30,CASP4,SLC8A1,HLA-DPA1,LYN,LILRB1,DMXL2,MVP,SLC31A2,TNS3,LACTB,TNFRSF14,ITGB2,C1QB,SYNGR2,CTSB,MTHFD2,GRN,ETV6,LITAF,SPPL2A,TOR3A,PSMB10,BAZ1A,PTPRC,SRI,FNBP1,FMNL2,DNPH1,MARCKS,GRINA,SEMA4A,APOL6,HLA-E,GIMAP4,CD47,CYP27A1,TNFAIP8,DNASE2,SCIMP,IFI27,ITPR2,CALR,CPM,NECTIN2,ALDH2,GSN,NINJ1,IFNGR2,GSDMD,GPX3,CBR1,FPR3,CD84,PGD,TALDO1,SDHB,NAGK,HCK,LYSMD2,SERPINF1,PSMA4,EFHD2,NAAA,IFI35,NCOA4,NMI,GSAP,PSME1,OAZ2,ARL6IP5,CTSA,CFLAR,PRELID1,DYNLT1
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_9_PMID_38969631,Macrophage,AREG,THBS1,EREG,NAMPT,ZNF331,IL1B,GPR183,NR4A3,G0S2,BTG1,ATP1B3,CREM,PLAUR,AC090498.1,TNFAIP3,CHMP1B,SAMSN1,MXD1,REL,C5AR1,NLRP3,FCN1,INSIG1,NFKBIA,PDE4B,KDM6B,SLC2A3,SDS,FOSL2,PNRC1,VEGFA,DUSP2,SERPINB9,RGS2,GK,ACSL1,NFKB1,HBEGF,SOD2,TIMP1,CDKN1A,PPIF,ELL2,NR4A2,IER3,ZFP36,MAP3K8,CD55,MCL1,SRGN,THBD,BASP1,CXCL2,SOCS3,TNFRSF1B,AKAP13,MMP19,CEBPD,PFKFB3,RILPL2,CXCR4,SAT1,FOSB,VCAN,OSM,HIF1A,NFKBIZ,RNF144B,BIRC3,NEAT1,RANBP2,SYAP1,CHD1,ICAM1,EZR,ZFAND5,TAMALIN,NR4A1,MAT2A,CFLAR,THAP2,JUNB,CYRIA,GNA13,RAB31,PIM3,SLC7A5,OLR1,ITGAX,FGD4,TFRC,TET2,PABPC1,PTPRE,YBX3,STK17B,ETS2,SMAP2,NFE2L2,HERPUD1,PRMT9,IRAK3,BCL3,CD83,SLC25A37,GABARAPL1,NFKBID,BCL2A1,STX11,PTPN1,SELENOK,SNX9,PTGS2,SLC43A2,CSRNP1,PHACTR1,WTAP,METRNL,ATP13A3,FKBP5,PPP1CB,LITAF,JMJD1C,CCNH,B4GALT1,ARL4C,ATP2B1,TGIF1,ZC3H12A,MAP2K1,ACSL3,HNRNPU,LIMS1,KLF4,KYNU,RAB20,IFITM2,EPB41L3,ADGRE2,SKIL,PPP1R15A,RASGEF1B,LILRB2,ATP2B1-AS1,RBPJ,RIPK2,DOCK4,DDX3X,RBM47,PER1,DDIT4,MANBA,CTNNB1,SH3BP5,GABARAP,ZEB2,IVNS1ABP,MIDN,C15orf48.1,FGL2,ZFP36L2,CSF2RA,CD44,PLEK,ATF3,CELF2,YPEL5,ZC3HAV1,TNFAIP2,RAPGEF1,PABPC4,CSF3R,SPAG9,ETV6,COTL1,PLSCR1,IRS2,LCP2,SFPQ,RNF149,CEBPB,STAT3,TLR2,SERPINB1,DSE,SLC11A1,PELI1,JOSD1,JUND,FPR1,RBM39,GNAQ,CHST11,PLXDC2,BHLHE40,EMILIN2,SNHG15,CLEC4E,IFI30,CMTM6
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_10_PMID_38969631,Macrophage,CCL3L3,CCL4L2,CXCL8,IL1B,TNF,CCL4,CCL3,CXCL2,CXCL3,DUSP2,IER3,MIR155HG,NFKBIA,CD83,TNFAIP3,BCL2A1,GPR183,PPP1R15A,ICAM1,NFKBIZ,IER2,NR4A2,ZFP36,SOD2,G0S2,PLAUR,PNRC1,NLRP3,NR4A3,EGR1,NR4A1,THAP2,FOSB,KDM6B,BTG2,GADD45B,ATF3,PTGS2,JUNB,PMAIP1,MAFF,CDKN1A,PLEK,PLAU,KLF6,SOCS3,OSM,PRDM1,DUSP1,NFKB1,CSRNP1,SGK1,REL,PHLDA1,INSIG1,NFE2L2,CHMP1B,ARL5B,NAMPT,PDE4B,FOS,SELENOK,PIM3,NFKBID,TAGAP,RGS1,EGR2,CREM,ABL2,SERPINB9,BIRC3,CFLAR,NINJ1,SRGN,CCRL2,ZNF267,OTUD1,WTAP,ZC3H12A,ZNF331,MCL1,BTG1,STX11,ATP2B1-AS1,EIF4A3,MAP3K8,ZFAND5,KLF10,TNFAIP8,RASGEF1B,ZFP36L1,C5AR1,BHLHE40,CEBPD,EIF4E,MAP2K3,ID2,LITAF,NEAT1,ETS2,XBP1,SQSTM1,PTGER4,SAT1,MXD1,CD69,TRIB1,H3-3B,PHACTR1,RILPL2,SKIL,LCP2,VEGFA,CCNL1,PFKFB3,FOSL2,PPP1R15B,HBEGF,CXCR4,KLF4,PLK3,MALAT1,DDX5,TGIF1,PLD4,IL1RN,JUN,LMNA,PTPRE,EIF1,NFKBIE,TNFAIP2,CKS2,PELI1,CEBPB,MARCKS,DNAJB6,B4GALT1,PPIF,NRP2,HERPUD1,RIPK2,JUND,IRF8,IL10RA,ARL4C,ETF1,EZR,OLR1,YBX3,GTF2B,SERTAD1,RGS2,BASP1,IRF1,B3GNT5,DUSP6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_11_PMID_38969631,Macrophage,MT1G,MT1X,MT2A,MT1E,MT1H,MT1F,MT1M,MIF,SPP1,LDHA,LGALS1,CRIP1,CSTB,S100A10,HMOX1,FABP5,RGCC,ENO1,PLIN2,ALDOA,PPDPF,SEC61G,TPI1,C15orf48.1,TXN,S100A6,GLUL,FAM162A,PGK1,CD52,RNASE1,FTH1,ATP5MK,ATP5ME,PKM,SH3BGRL3,TMSB10,UPP1,COX7A2,FBP1,SERF2,PGAM1,MYL6,NOP10,S100A4,VIM,DYNLL1,POLR2L,UQCR11,ATP5F1E,UQCRQ,GSTO1,ATOX1,ELOC,COX7B,UBL5,EIF4EBP1,POMP,S100A11,SLIRP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_12_PMID_38969631,Macrophage,LRMDA,KCNMA1,FMNL2,FMN1,DPYD,ATG7,CHST11,MAML2,DOCK4,FTX,DNAAF9,ELMO1,PLXDC2,FHIT,IGKC,ABR,FRMD4A,TNS3,FOXN3,FKBP5,SFMBT2,DLEU2,ARHGAP26,TBC1D22A,RBM47,TCF12,LDLRAD4,SLC8A1,FCHSD2,FRMD4B,UTRN,SPIDR,SNX29,ASAP1,PTPRJ,FCHO2,SLC1A3,MED13L,DAPK1,ZFAND3,SSH2,CAMK1D,ZBTB20,ITPR2,LPP,CPM,ARHGAP15,TBC1D5,UBE2E2,EXOC4,DOCK2,GNAQ,PRKAG2,TRPS1,SBF2,ZSWIM6,RERE,AOAH,MITF,ETV6,MERTK,MYO9B,ZEB2,MYO5A,ATXN1,AFF1,ARID1B,TRIO,CELF2,MEF2A,PIK3R5,IQGAP2,TBXAS1,RREB1,QKI,MACF1,KANSL1,GSAP,BMP2K,RAPGEF1,DMXL2,NPL,AAK1,DOCK8,RABGAP1L,MBNL1,RNF213,FOXP1,APBB1IP,FNBP1,CMIP,TENT2,BIRC6,RBM6,ANKRD11,AP2A2,NEAT1,PICALM,ASH1L,TNRC6B,ZFHX3,JMJD1C,CHD9,FNIP2,CUX1,MYCBP2,MYO1F,N4BP2L2,FNDC3B,KMT2C,DST,SLCO2B1,VOPP1,PREX1,SDCCAG8,INPP5D,BACH1,PIAS1,ABCA1,TNFAIP2,BAZ2B,VMP1,PBRM1,CYTH1,ACER3,ATM,MANBA,SMAP2,RBPJ,PARP14,TFEC,MBP,USP15,AKAP13,VPS13C,RDX,CELF1,CYFIP1,GOLGA4,TAOK3,CYRIB,MARCHF1,NIPBL,SETX,SYK,AKAP9,ABHD12,STX7,BPTF,CEP170,RIN3,ITSN2,NUMB,RASSF4,PCM1,CCDC88A,SOAT1,ELL2,ACAP2,ITGAX,ANKRD12,LUC7L3,TTC3,SRRM2,RBMS1,LYN,FYB1,RB1,ROCK1,GNB1,MGAT4A,WNK1,PAFAH1B1,PNISR,RAB10,RNF13,MAP3K2,MALAT1,DDX17,WIPF1,SP100,NCOR1,ADAP2,ELF1,ABI1,ATRX,RNF130,AP1B1,GPCPD1,CD84,PRMT2,RAB31,JAK1,SRSF11,SCAF11,RAP1A,TCF25,WSB1,MACROH2A1,GRB2
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_13_PMID_38969631,Macrophage,FN1,S100A6,S100A10,S100A4,EMP3,CCL18,CRIP1,FBP1,LMNA,MARCO,VIM,AHNAK,ANXA2,LTA4H,FLNA,ANXA1,TAGLN2,GCHFR,NCF1,SERPINA1,ADGRE5,TSPO,GLIPR2,ANPEP,ALDH2,MRC1,C1orf162.1,MTRNR2L12,SAMHD1,LRRFIP1,SH3BGRL3,CD44,PLEC,MCEMP1,CD9,ITGAM,CYBB,ALOX5,HLA-DRB5,RAB11FIP1,CD151,PLBD1,SNX10,TXNIP,S100A11,CORO1C,RGCC,ACTG1,MYADM,EZR,FCGR3A,BBLN.1,OLR1,ACP5,FGR,PDK4,GSN,RAB13,VSIG4,VASP,MYH9,LGALS3,FPR3,ALCAM,MSN,GPCPD1,RNH1,PNPLA6,LYZ,RHOA,HLA-DQA2,CD99,CD52,CAST,PEA15,ANXA4,S100A8,PLP2,TLE5,MICOS13.1,TGFBI,ACTN1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_14_PMID_38969631,Macrophage,H4C3,STMN1,H2AZ1,PCLAF,TOP2A,HMGB2,UBE2C,MKI67,TYMS,HMGN2,CENPF,PTTG1,TUBA1B,NUSAP1,HMGB1,TK1,CDK1,CKS1B,RRM2,PCNA,BIRC5,SMC4,H2AZ2,DUT,NUCKS1,CDKN3,DEK,KPNA2,TPX2,CDC20,CENPM,HMMR,CKS2,SMC2,CCNB1,TMEM106C,TUBA1C,ZWINT,RANBP1,CCNB2,DTYMK,ASPM,ANP32B,RAN,MCM7,RPA3,H2AX,CENPW,GGH,CLSPN,TMPO,IDH2,GTSE1,HMGB3,RAD51AP1,PTMA,ANP32E,AURKB,MAD2L1,DNMT1,NASP,CENPE,CENPU,CKAP2,PRC1,FAM111A,RAD21,MZT2B,ARL6IP1,CARHSP1,DHFR,LSM4,CEP55,CCNA2,SKA2,UBE2S,SIVA1,LMNB1,PARP1,CENPK,KIF20B,SNRNP25,ATAD2,LSM5,PLK1,PHF19,NUF2,UBE2T,GMNN,USP1,TACC3,ASF1B,PA2G4,SNRPD1,HMGN1,DDX39A,SLC25A5,DNAJC9,ANAPC11,SGO2,ANLN,MCM5,NUDT1,BHLHE40 /// CENPX,MZT2A,CBX3,AURKA,RRM1,LDHB,FEN1,SNRPG,HNRNPAB,HELLS,SNRPB,NCAPG,BUB3,CKLF,CDKN2C,KIF22,SHCBP1,KNL1,CENPN,CDCA3,SPC25,JPT1,PPIA,PSIP1,CALM3,SMC1A,ZDHHC12,KIF11,NUCB2,MCM3,RHEB,PSMC3,SMC3,EZH2,RBBP7,PLP2,ENO1,NCL,SAC3D1,CCDC34,RACGAP1,HNRNPD,MCM4,LSM3,YWHAH,CACYBP,UQCC2,ALOX5AP,CBX5,PAK1,LDHA,SET,HNRNPA2B1,TCF19,BARD1,COMMD4,SLBP,SSRP1,RNASEH2A,PGAM1,SNRPF,CORO1A,NCAPD2,PFN1,COX8A,TPI1,BANF1,SNRPE,HINT1,HNRNPA3,IFI16,H1-2,CHCHD2,RBMX,FADS1,HNRNPA1,TIMM10,PPM1G,PKM,MZT1,ILF2,PKIB,VDAC3,SAE1,SNRPD3,COX5A,TUBG1,RAC2,HP1BP3,ITGB3BP,VPS29,HPRT1,PTGES3,SRSF3,HNRNPF,ERH,TMEM160
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_15_PMID_38969631,Macrophage,LYZ,RP11-1143G9.4,FCN1,RETN,CFD,ALDH2,TXNIP,JAML,CSTA,LTA4H,MARCO,CTSS,HLA-DRA,MNDA,GRN,CPVL,HLA-DQA2,TKT,CLEC12A,ACP5,HLA-DQA1,HLA-DPB1,C1orf162.1,EVI2B,HLA-DQB1,SERPINA1,LRPAP1,HLA-DPA1,ARL4A,FBP1,CTSH,HLA-DRB1,CTSC,MCEMP1,HLA-DMB,HLA-DRB5,PLBD1,NCF2,HLA-DMA,BBLN.1,LY86,MRC1,LST1,VSIG4,ADA2,AZI2,TMSB4X,GSTP1,SLC25A6,CST3,GCA,GMFG,VSIR.1,STXBP2,SCPEP1,SNHG32.1,CLEC4A,PPT1,EIF3E,TMEM176B,AOAH,SLC7A7,FGL2,CAT,VMO1,CD48,CARD16,NAP1L1,CD302,DOK2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_16_PMID_38969631,Macrophage,MMP9,TIMP1,SPP1,IL1RN,VCAN,FN1,SDC2,S100A8,LPL,C15orf48.1,S100A9,MIF,FABP5,CD36,CSTB,LDHA,FBP1,ANPEP,ENO1,FLNA,CLEC5A,PKM,SH3BGRL3,CTSB,PGK1,TPI1,G0S2,SLC2A3,FCN1,ALDOA,ACP5,AQP9,S100A10,EMP1,ERO1A,PLIN2,AC090498.1,VIM,IFI30,ITGB2,LSP1,PGAM1,SLC16A3,CTSL,SLC25A37,PPIF,MFSD12,RGCC,LGALS1,GSN,CD44,IL4I1,TPM4,RAC2,PELATON,SLC11A1,UPP1,HCST,TGM2,ALCAM,LIPA,CALM3,ACTN1,MMP19,ANXA2,LCP1,PLP2,P4HB,TGFBI,HM13,APLP2,CD82,TCIRG1,ATP13A3,SLC43A3,PLAUR,ADM,ADAM8,BCAT1,CALR,ITGAX,GPI,PDXK,SEC61G,ITGA5,HMGA1,BCAP31,GPNMB,GM2A,PLA2G7,RAB13,ATF5,FGR,NDRG1,LIMS1,ATP1A1,FCGR2B,ITGAM,CD63,CYTOR,EMP3,SCARB2,ACTG1,RALA,NCF2,PHLDA1,MMP14,CD9,CAMK1,BASP1,IFI6,CYSTM1,GNS,HSPA5,BCL2A1,PNP,ANXA5,EIF5A,ABHD2,PPP1R14B,SLC16A10,S100A6,EFHD2,ENG,TYMP,ATP6V1A,ATP6AP2,LAPTM5,GNAS,CD99,PTPRE,VEGFA,GSTO1,ITGB1,SQOR,CALM1,NME1,FTH1,VDAC1,BZW1,FNDC3B,ALOX5AP,FERMT3,MACROH2A1,CEBPB,FNIP2,SOD2,SRGN,MCRIP2,MSN,PDIA6,OSBPL8,ZYX,TAGLN2,C4orf3.1,P4HA1,CTSD,HSP90B1,MYADM,TREM1,HPCAL1,TMEM167A,LAMP1,EIF4G2,BTG1,PDIA3,UQCRC1,TUBA1C,NUMB,YWHAZ,PEA15,CALU,CCDC88A,PAPSS1,MAP2K3,EMILIN2,CD84,TIMP2,ELOC,GNG5,S100A11,ADAM9,IL2RG,ACSL4,CD52,RHOC,TPM3,CCR1,ATP6V1G1,ANXA11,STXBP2,VKORC1,TLN1,PDLIM7,SIRPA,FKBP1A,ATP5ME,SURF4,PIK3AP1,SDF2L1
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_17_PMID_38969631,Macrophage,ISG15,CXCL10,IFIT1,IFIT2,CCL8,IFIT3,IFITM1,MX1,RSAD2,TNFSF10,IFITM3,IFI6,APOBEC3A,ISG20,CCL2,LY6E,IFI44L,OAS1,MX2,IL1RN,EPSTI1,NT5C3A,IFITM2,IRF7,IFI35,HERC5,IFI27,GBP1,XAF1,TNFSF13B,OAS3,OASL,IFIH1,SAMD9L,OAS2,UBE2L6,TYMP,VAMP5,CTSL,IL4I1,IFI44,PARP14,LAP3,DYNLT1,BST2,CALHM6,EIF2AK2,SAMD9,RNF213,STAT1,PLSCR1,USP18,CMPK2,PSMB9,SP110,SSB,GBP4,RIGI,C15orf48.1,IFI30,MARCKS,SDS,MT2A,ATF5,DRAP1,PSME2,WARS1,GBP5,NMI,IFI16,PARP9,RABGAP1L,TAP1,LGALS9,TRIM22,DDX60L,GIMAP4,FPR3,TIMP1,APOL6,CCR1,MNDA,GMPR,CCL3L3,NAPA,ADAR,RTCB,STAT2,SIGLEC1,NAGK,CBR1,PML,TMEM123,PSMA4,CD48,ODF3B,LGALS3BP,LYN,SPATS2L,PHF11,FCGR3A,CCL4L2,PSMB8,GCH1,LGMN,HCST,LILRB4,HPSE,RAB8A,CASP1,LILRB2,CCL3,ZNFX1,PLA2G7,PLAAT4,PLEKHO1,LILRB1,SCARB2,HLA-A,CHMP5,H3-3B,BLVRA,CALM1,SAT1,DTX3L,MYL12A,CNP,SHISA5,NUB1,SP100,CD14,UNC93B1,HAVCR2,GNG5,NINJ1,PARP12,CCL4,HLA-E,MYD88,PPA1,SRGN,TPM4,XRN1,GALM,TMSB10,CARD16,FCGR1A,CLIC1,SUB1,LYSMD2,BAZ1A,RBCK1,APOBEC3G,PSMB10,NECTIN2,CALR,TYROBP,C1orf162,NCF1,CD86,PLEK,SPP1,GIMAP7,TPM3,CD69,CD47,SMCHD1,ATP6V0C,SNX6,CASP4,HLA-B,BCL2A1,CREG1,FGL2,ZC3HAV1,ADAP2,ATOX1,TAGAP,SCIMP,LPAR6,TMEM50A,S100A11,PARP10,LCP2,RNF114,SPHK1,GNB4,SYNGR2,HLA-C,PSME1,SQOR,TENT5A,GRB2,PRELID1,FLOT1,FCER1G,BAG1,CYSTM1,SCO2,GLUL
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_18_PMID_38969631,Macrophage,COL1A2,COL1A1,COL3A1,IGFBP7,SPARC,MGP,LUM,DCN,SFRP2,BGN,CALD1,TAGLN,CCN2,COL6A2,TIMP3,COL6A1,SPARCL1,ACTA2,COL6A3,RARRES2,MYL9,FBLN1,THY1,CTHRC1,IGFBP5,CCN1,IGFBP4,CCDC80,AEBP1,C1R,C1S,COL5A2,NNMT,MMP2,TPM1,CLU,TPM2,COL5A1,NBL1,SERPINF1,PCOLCE,PRSS23,CAVIN1,CTSK,TM4SF1,ID3,MDK,APP,COL4A2,SERPINH1,ADIRF,CNN3,COL8A1,FSTL1,DSTN,VCAN,PALLD,CAV1,FN1,ID1,PLPP1,TSC22D1,CRIP2,SELENOM,MXRA8,GNG11,EMP1,SPON2,ITGB1,COL18A1,HTRA1,EPAS1,MFGE8,IFITM3,SOX4,TPM4,S100A16,MYH9,SPTBN1,HES1,GADD45A,CD99,CAVIN3,TCF4,ARID5B,CALU,TNFRSF12A,BEX3,C12orf57,TUBA1A,IL32,ACTN4,EEF2,ITM2C,IFITM2,S100A13,PPIC,A2M,GSN,JUN,MARCKSL1,AHNAK,EID1,SELENOW,LIMA1,IFITM1,SEPTIN11,SPATS2L,SERPING1,TCEAL9,RCN1,CLEC11A,SEPTIN7,TIMP1,MT1E,PTTG1IP,PRDX2,EGR1,CYB5R3,GADD45B,ATP1A1,MAGED2,LAPTM4A,HSPA5,NUCKS1,RRBP1,PHLDA1,TSC22D3,NUCB2,EIF4A1,YWHAQ,MMP14,ACTN1,YBX3,NORAD,GNAS,MT2A,PDIA3,LMNA,CLIC4,ARF4,DDX5,PDLIM1,NCL,SEC31A,FOSB,CD151,JUNB,REXO2,SOCS3,EIF4A2,SBDS,CYTOR,IL6ST,PGRMC1,MAP4,KRT10,RABAC1,SDC2,HNRNPA0,ATF4,HCFC1R1,CYB5A,CD59,CFD,HSPB1,LGALS3BP,LMAN1,ACTG1,CIRBP,RHOC,CNN2,PPIB,SSR2,FLNA,HNRNPA1,PPDPF,PEBP1,IER2,H1-10,FOS,EIF4B,TTC3,BSG,HDLBP,MORF4L2,EIF4G2,CMTM3,NFIC,PHPT1,RBM39,PTMS,RACK1,C19orf53,MORF4L1,P4HB,VKORC1,ZFAS1,CD55,HSP90AB1
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_19_PMID_38969631,Macrophage,S100A8,S100A9,S100A12,FCN1,VCAN,THBS1,EREG,AREG,IL1B,AC090498.1,TIMP1,G0S2,BCL2A1,CD55,LYZ,NLRP3,PPIF,CFP,CD300E,PLAUR,APOBEC3A,SOD2,SLC2A3,IFITM2,NAMPT,RP11-1143G9.4,S100A4,SAMSN1,ATP2B1-AS1,AQP9,CXCL2,CSTA,SLC25A37,FPR1,KDM6B,NFKBIA,COTL1,LGALS2,TNFRSF1B,PLAC8,CCL20,SERPINB1,H3-3A,MXD1,AP1S2,LILRA5,STXBP2,CSF3R,EHD1,FGR,SELL,CORO1A,CDKN1A,BCL3,CD48,RILPL2,LST1,TKT,SRGN,RETN,FLNA,CXCL8,PTGS2,GABARAP,SH3BGRL3,C5AR1,MAP3K8,MNDA,S100A6,TNFAIP3,PNP,THAP2,PNRC1,OSM,SERP1,BTG1,THBD,ATP2B1,CD93,DUSP6,IL1RN,MCL1,ANPEP,CLEC4E,PRELID1,ACSL1,GCA,UPP1,ICAM3,BASP1,PTPRE,LIMD2,NFKBIZ,GK,NFKB1,EMP3,SLC11A1,LCP1,LILRB2,SOCS3,LSP1,PDE4B,SERPINB9,CD44,RNASE2,PIM3,CARD16,CRIP1,CD36,EIF1,AGTRAP,GMFG,ASGR1,VSIR.1,VEGFA,STK17B,PLEK,H3-3B,PABPC1,MPEG1,FAU,FOSL2,ETS2,SELENOK,TMA7,MYO1G,IVNS1ABP,TALDO1,SERPINA1,GSTP1,AIF1,JAML,PNPLA8,CEBPB,CHD1,DUSP2,DDX21,TYMP,METTL9,ATP5F1E,RNASEK,HBEGF,HCK,LAMTOR4,PLP2,POLE4,IER3,PFDN5,NCF2,TSPO,PFKFB3,PELATON,SYAP1,MAP2K3,IRAK3,WTAP,EZR,TMEM167A,AHNAK,UBE2D1,CLEC12A,ATP5MC2,NACA,UBA52,HNRNPU,ARPC1B,PGLS,RAC2,LYST,TNIP1,DAZAP2,VASP,PGD,SLC25A6,CTSS,APRT,POLR2L,ARF5,NUMB,ALDOA,NUP214,BST1,SLC43A2,COX4I1,PCBP1,HCST,ODF3B,GNB2,COMMD6,GPSM3,ATP5MG,BLVRB,LCP2,OAZ1,WAS,CFD,EIF3K,DNTTIP2,MIDN,EFHD2
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_20_PMID_38969631,Macrophage,CCL5,IL32,NKG7,IGKC,TRBC2,GZMA,CD3D,LTB,CD2,TRAC,CST7,CD3E,CD7,CD69,ACAP1,CXCR4,MALAT1,IL2RG,TSC22D3,ISG20,JUND,STK17A,BTG1,RAC2,IL7R,PLAAT4,ZFP36L2,LIMD2,STK17B,EVL,CORO1A,STK4,HNRNPH1,CYTIP,BIRC3,VAMP2,PNISR,CYTOR,SRSF7,PTPRC,CD48,SEPTIN6,ARGLU1,PPP2R5C,NOP53,PSMB9,HNRNPA1,SUB1,EZR,TLE5,TMA7,LSP1,HINT1,DUSP2,DDIT4,PPP1R2,HCST,DDX24,LEPROTL1,SARAF,YPEL5,KMT2E,ANAPC16,EIF4A2,TERF2IP,SOD1,TOMM7,RBM39,SRSF2,LCP1,PLP2,HMGB2,N4BP2L2,ARF6,RSRP1,CD52,HLA-A,FAU,ARID4B,IRF1,SRSF5,PSME1,COMMD6,DDX5,TRIR.1,SNRPD2,CIRBP,PPDPF,EEF2,RACK1,HMGN1,SON,OST4,PARK7,TXNIP,MYL12A,PTMA,FNBP1,ARL6IP5,MTRNR2L12,HLA-E,ARHGDIB,NPM1,EIF3F,SSR2,YWHAZ,LDHB,HNRNPDL,H3-3B,HNRNPA2B1,SRSF3,ARL4C,HSPE1,EIF3E,HLA-B,ACTG1,COX7C,NAP1L1,NACA,HLA-C,HSPA8,APRT,EIF1,HNRNPK,BTF3,EDF1,CD37,MYL12B,HMGB1,EIF3H,ID2,C19orf53.1,CCNI,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_21_PMID_38969631,Macrophage,HMOX1,SLC40A1,CCL18,CD163,LGMN,KCNMA1,FUCA1,CTSB,CTSL,STAB1,SELENOP,SLC48A1,NPL,DPYD,CTSZ,FMNL2,PLTP,CREG1,ARL4C,MERTK,SLCO2B1,AP2A2,RGL1,TNS3,GLUL,FOLR2,ABCA1,SDC3,DAB2,RNASE1,FKBP5,BLVRB,ME1,LHFPL2,IDH1,MAF,CD84,TGFBI,MTSS1,MYO5A,LILRB5,TTYH3,SLC7A8,CTSD,FTL,RBM47,PDK4,CMKLR1,CPM,ASPH,FRMD4B,ELL2,GPNMB,CCR1,SIGLEC1,DOCK4,RAP2B,MPEG1,LIPA,NRP1,MPP1,PLD3,IQGAP2,MGLL,TXNRD1,CHST11,UTRN,ANKH,RNF213,PSAP,SQSTM1,QKI,MACF1,TCN2,BMP2K,FRMD4A,F13A1,CLTC,FCHO2,FNDC3B,MRC1,AP1B1,ZEB2,FCGRT,RBMS1,TIMP2,MYO9B,PLXNC1,RAPGEF1,FPR3,C2,DMXL2,PLA2G7,PMP22,TMIGD3,PREX1,MFSD1,GNAQ,MS4A6A,FNIP2,TBXAS1,PGD,SLC38A6,CD36,FOXN3,CYFIP1,TSPAN4,ADAP2,SLC1A3,GOLGA4,MS4A4A,PLXND1,TDP2,ITPR2,DAPK1,SNX6,GNS,AAK1,ASAP1,CD4,LAMP1,ARHGAP18,ME2,ATP6V1A,MAFB,LRP1,EPHX1,PRNP,PTAFR,UBE3A,IQGAP1,MARCHF1,DOCK2,ALDH1A1,LPP,ATP2A2,GM2A,ADAM9,TPP1,GNPTAB,PRDX1,RBPJ,PBRM1,MCOLN1,POR,ARRDC3,TNFAIP2,FNBP1,MARCKS,SMPDL3A,RAB32,PLEKHO2,IGF2R,ZFHX3,RAB31,NRP2,PICALM,RASSF4,SGPL1,TXN,SLA,WDR26,CPQ,FOXP1,ACSL1,GNPDA1,WNK1,CELF2,SOAT1,EPB41L2,CYRIB,SWAP70,SYK,TALDO1,GOLGB1,CALU,GRB2,CTSA,CYB5R4,ANKRD12,MMP14,SCD,DICER1,GLMP,BRI3,SNX9,ADI1,COLGALT1,HSP90B1,NFIC,PIK3AP1,CCDC88A,MKNK1,CDV3,PLEKHA2,ANKRD11,TFEC,PUM1,NCOA4,PLEKHB2
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response,38969631,TAM_22_PMID_38969631,Macrophage,RP11-290F20.3,IFITM2,FCN1,LST1,COTL1,CFP,LILRB2,LIMD2,LILRA5,VSIR.1,IFITM3,CORO1A,STXBP2,FGR,CD48,HSPA1B,WARS1,NAAA,SERPINA1,FCGR3A,CYTIP,RHOB,LYST,HSPA1A,TNFRSF1B,RIPOR2,PTPN6,LRRC25,APOBEC3A,MTSS1,CDKN1C,RAC2,POU2F2,CUX1,MTRNR2L12,PTPRC,LILRA3,C19orf38.1,CD55,FAM110A,TKT,ICAM3,CD37,TSC22D3,UQCR11.1,STK17B,S100A4,LILRA1,CD52,NACA,PLAC8,LYN,HCK,NFKBIZ,LSP1,TCF7L2,MYO1G,ADGRE5,RNF144B,PILRA,SELPLG,BIN2,POLD4,SEPTIN9,CALHM6,RAB24,SPN,PRELID1,ITGA4,CFD,AIF1,TESC,DNAJB1,CTSS,IFITM1,NAP1L1,CARD16,GNG2,ICAM2,SLC2A6,ATP6V0C,UNC119,VASP,LCP1,GABARAP,RAP1B,MTPN,WAS,KLF2,GPBAR1,ITGAL,LILRB1,SIGLEC10,BID,SLC25A6,PAG1,CPPED1,ATP2B1-AS1,ABI3,NME1-NME2,WSB1,LILRA2,TCIRG1,DUSP1,RGS19,SERP1,TBC1D8,PPDPF,SYTL1,ABRACL,CDC42EP3,PSMB9,EIF4A1,SIDT2,RHOG,RASGRP2,CD79B,ADGRE2,PABPC1,CASP1,H3-3A,MYD88,CLEC12A,FGL2,MAPKAPK3,ARHGDIB,OAS1,CD300E,GPSM3,HIGD2A,SLC44A2,PRAM1,SSH2,RGS2,NAA38.1,CCND3,EIF1,MSN,ZYX,PSMB10,ARHGEF1,DRAP1,HK3,PGLS,TMPO,FLNA,SCIMP,RNF149,DAZAP2,ATG3,CSK,EMP3,SAT1,EIF3F,MYO1F,WDR74,CMTM6,GMFG,SH3BGRL3,TNFSF10,LTB,DENND10,ARRB2,BCL2A1,EEF2,TRAF3IP3,STK10,GRK2,HCLS1,ADA,UBE2J1,SMCHD1,CCNI,RHOC,PFN1,MS4A7,PSME1,GSTK1,PFDN5,TPM3,SNX18,CDA,TIMP1,AGTRAP,CDH23,ZFAND5,HLA-E,UTRN,GIMAP7,PYCARD,MPEG1,GDI2,NR4A1,YWHAZ,PCBP2,VAMP5,DUSP6,TSPAN14,AP1S2,FGD2
A cell atlas of the human fallopian tube throughout the menstrual cycle and menopause,39753552,B/ plasma cells subtype 1_PMID_39753552,B cell,JSRP1,JCHAIN,GPR160,MPZL3,DNAAF1,IL2RG,CYTIP,COBLL1,SEC11C,RHOH,ITM2C,PRDX4,PDK1,LY96,PDE4B,CYTOR,GLRX,PECAM1,CYBA,XBP1,SSR4,HERPUD1,OTUD1,BANK1,DUSP5,BASP1,TRIB1,ISG20,PLPP5,SMAP2,COCH,EVI2B,CD48,CD55,EZR,PELI1,SLAMF7,ICAM2,SDF2L1,CXCR4,PDIA6,SPAG4,C12orf45,EPSTI1,CTSS,TMCC3,GMDS,HSP90B1,BID,SLC35F2,HSPA1B,CHD7,KLF2,SEL1L3,ATP2B1-AS1,SLC16A3,DDIT4,SVIP,ANKRD37,RELB,KLF6,TMEM107,FBXW7,AC103591.3,SEC14L1,KLHL6,PIM2,TEC,NUCB2,COL4A4,ELL2,HSPA1A,EAF2,PLEKHA7,BIRC3,EVI2A,PABPC4,AP1S3,TYMP,CRELD2,PRDM1,POU2F2,RRBP1,ST6GAL1,RGS1,MEF2C,CTSH,ATF5,MAP3K1,AREG,BCL2L11,PIP5K1B,MLLT3,ALOX5,BEX5,VPS37B,SLC39A8,ITGA8,FAAH2,CSGALNACT1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A cell atlas of the human fallopian tube throughout the menstrual cycle and menopause,39753552,B/ plasma cells subtype 2_PMID_39753552,B cell,JSRP1,CD83,HLA-DRA,HLA-DQA1,CD74,BANK1,HLA-DRB1,SMAP2,HLA-DPB1,SCIMP,HLA-DPA1,HLA-DQB1,CD48,RELB,SPAG4,NFKBID,GPR183,ANKRD33B,CD37,RASGEF1B,EZR,IRF8,LYN,SLAMF7,PELI1,BCL2A1,CD55,SLC35F2,LAPTM5,LTB,PLEKHG1,TAGAP,CORO1A,ATP2B1,CD52,CYBA,TEC,POU2F2,COBLL1,BCL2L11,MEF2C,COL4A4,CXCR4,REL,PHACTR1,NCF2,CYTIP,BASP1,ISG20,SYNGR2,CNTNAP2,GRASP,EVI2B,PLAC8,JCHAIN,DOCK2,LAT2,HLA-DMB,IFIH1,TACC3,COCH,KLHL6,HERPUD1,CSGALNACT1,IKZF3,WDFY4,BID,TRAF4,SLC16A3,NCKAP1L,TGFBI,CD86,IKZF1,AC103591.3,LYZ,LY96,SEL1L3,CD22,SEC11C,IL10RA,AP1S3,AREG,RCSD1,APBB1IP,GRK3,HDAC9,ARHGAP24,EAF2,ALOX5,INPP5D,RIPOR2,PIM2,STRBP,PLEK,ADAM28,BRCA2,ST6GAL1,JAML,CLCN5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A cell atlas of the human fallopian tube throughout the menstrual cycle and menopause,39753552,Mast cells_PMID_39753552,Mast cell,BID,HPGD,VWA5A,AP1S3,ACSL4,SAMSN1,LAT2,CDC42EP3,HPGDS,PAK1,CD44,SORBS1,BCL2A1,PTGS2,GATA2,CPEB4,DUSP14,MAP3K8,FAM107B,BHLHE40,RELB,ANXA1,BIRC3,PLIN2,SRGN,NFKB1,REL,FTH1,ZNF440,DDIT4,MAP2K3,ARHGAP18,LPCAT2,CD83,HIF1A,CPM,CSF1,FCER1G,TYROBP,GALNT6,SYTL3,CYTOR,CD9,ELL2,RASGEF1B,BMP2K,ARHGDIB,B4GALT5,AREG,SLC2A3,LTC4S,CAVIN2,CD82,TUBA1A,PRKX,MAPRE3,IL18,ID2,SGK1,TBXAS1,GK,PAG1,SCIN,RGS2,DUSP6,CENPU,STMN1,ITGA9,LCP2,TPST2,SERPINB1,MCTP1,MIR4435-2HG,PROCR,SLC26A2,CD37,RYR3,PIM2,EAF2,AHNAK2,GPAT3,LMO4,CD84,MAOB,WDFY4,BACE2,RHOH,ALOX5,NTM,PRAG1,C3AR1,DOCK2,STXBP6,CD22,SLC16A3,PSTPIP2,NFKBID,TEC,COBLL1,HS6ST1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A cell atlas of the human fallopian tube throughout the menstrual cycle and menopause,39753552,Monocytes_PMID_39753552,Monocyte,MS4A6A,LYZ,GK,GRN,PLEK,SAMSN1,CPVL,CLEC4E,ITGB2,AIF1,TNFRSF1B,G0S2,C1orf162,MNDA,RNF144B,LCP2,PTPRE,HLA-DQA1,PHACTR1,LAPTM5,FCER1G,MSR1,CTSS,BASP1,TYROBP,HLA-DMB,HLA-DPB1,FNIP2,GPR183,ATP2B1,GFOD1,METRNL,HLA-DRB1,RASGEF1B,C5AR1,BCL2A1,HCLS1,FGL2,PDE4B,HLA-DRA,MAP3K8,IL1B,CD83,INSIG1,CD74,HLA-DPA1,HLA-DQB1,COTL1,PLAUR,CXCL3,CST3,CXCL8,SGK1,NAMPT,FAM49B,ATP2B1-AS1,LYN,GPAT3,AP1S2,BID,TYMP,OGFRL1,C3AR1,CXCL16,SH2B3,NLRP3,PSTPIP2,CD86,THBS1,RAB31,NCF2,IL18,GRASP,JAML,SHTN1,TBXAS1,ACSL1,DOCK2,CD93,PAK1,TGFBI,TM6SF1,KYNU,AREG,TNFSF13B,IRF8,SLC16A3,ALOX5,1-Mar,BANK1,PILRA,SRGAP2,IRAK3,CIITA,POU2F2,CNTNAP2,WDFY4,SCIMP,EAF2,SLC11A1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A cell atlas of the human fallopian tube throughout the menstrual cycle and menopause,39753552,Macrophages_PMID_39753552,Macrophage,MS4A6A,GK,F13A1,SCN9A,C3AR1,CD93,SH2B3,PLEK,CNTNAP2,AIF1,CD163,PTPRE,TMCC3,RNF144B,OGFRL1,LPAR6,LCP2,HLA-DQA1,NLRP3,CLEC4E,SAMSN1,MSR1,C1QB,PSTPIP2,CD86,MFSD1,TM6SF1,FCER1G,HLA-DPB1,PHACTR1,LAPTM5,TYROBP,CXCL16,TBXAS1,GPR183,CTSS,FAM49B,LYVE1,HLA-DRB1,BCL2A1,PILRA,SLC16A3,LYN,CSF1R,CD84,CD14,HLA-DMB,IRAK3,IL18,C5AR1,RASGEF1B,HAVCR2,NCKAP1L,ALOX5,C1orf162,SYK,ACSL1,LYZ,ADAM28,MNDA,SCIMP,TGFBI,NCF2,IL1B,FGL2,HLA-DRA,SLC1A3,CPVL,CD36,BCAT1,SRGAP2,CCL3,CD83,MTSS1,IER3,CD74,HLA-DPA1,HLA-DQB1,PLAUR,ARRB2,HBEGF,CXCL8,CXCL3,LGMN,SGK1,ARHGAP24,GATM,LY96,MAFB,MERTK,LAT2,1-Mar,HPGDS,EAF2,SLC11A1,TLR5,TLR4,KYNU,CIITA,WDFY4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A cell atlas of the human fallopian tube throughout the menstrual cycle and menopause,39753552,T/ natural killer cells_PMID_39753552,T cell,IFNG,XCL1,CCL5,SYTL3,NKG7,RUNX3,PTPN22,CD69,GZMK,HAVCR2,VAV3,SLA,CRTAM,AL359220.1,CD52,CST7,TAGAP,PTPRC,FYB1,ISG20,METRNL,CXCR4,ARAP2,CCL4,XCL2,KLRD1,ITGA4,PLAC8,ALOX5AP,AC103591.3,GZMA,KLRB1,LCP1,ETS1,SLC38A1,PTPN7,TRBC2,TYROBP,CD96,ARHGDIB,DUSP4,VPS37B,HCST,STK17B,CCL3,MAP3K8,HCLS1,GFOD1,SRGN,IRF8,BCL2L11,HLA-B,AREG,DUSP2,NR4A2,ID2,EMB,CD247,TNF,TUBA4A,LAT2,CRYBG1,DDIT4,EVI2A,STK17A,CD53,CORO1A,IL32,AOAH,DOCK2,CD48,APBB1IP,ABCB1,DOCK8,RHOH,IL2RG,SKAP1,STAT4,IQGAP2,CYTIP,ITK,CD37,ITGB2,PPP2R2B,CCDC69,IKZF1,IKZF3,SLAMF7,EVI2B,SLC16A3,TRAT1,KLHL6,MYBL1,LINC01871,CD3E,TXK,SAMD3,INPP5D,GPR171,NCAM1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"A single cell atlas of human cornea that defines its development, limbal progenitor cells and their interactions with the immune cells",33865984,monomac/moDC_PMID_33865984,Monocyte,IL1B,CXCL8,EREG,BCL2A1,G0S2,BASP1,CCL4L2,C15orf48,CXCL2,CCL3L1,CCL20,PLAUR,PLEK,CXCL3,S100A8,SOD2,MIR155HG,IL23A,OLR1,PTGS2,MMP9,AQP9,CCR7,CCL3,CCL22,FNIP2,GPR183,TCHH,IL1R2,CSTB,INSIG1,SERPINB9,TIMP1,PPIF,CCL4,CD55,DUSP6,TNF,AC016831.1,IL1A,PLAU,NINJ1,UPP1,CCRL2,MAP3K8,KYNU,TNFAIP8,TNFAIP2,DRAM1,SRGN,CD83,IER3,PTPRE,ITGAX,TNFAIP6,CSF3R,PNRC1,CTSZ,HLA-DQA2,NLRP3,SERPINA1,B3GNT5,NFKBIA,SLAMF7,PHACTR1,ABL2,ICAM1,NR4A3,HLA-DRA,DNAAF1,CDC42EP3,TLR2,GPR132,PLIN2,GEM,SEMA6B,LCP2,FCGR2A,INHBA,GLA,SERPINB1,GPR84,HLA-DQA1,KDM6B,HLA-DRB1,TREM1,SLC7A5,PDGFB,CD93,CXCL1,RGCC,THBD,PHLDA1,NRIP1,C5AR1,TRAF1,IL1R1,HSPD1,MFSD2A,FGR,NFKB1,PELI1,HLA-DPB1,VIM,PLEKHO1,ARL5B,AC002456.1,ETS2,TNFRSF1B,S100P,CDKN1A,PLXNC1,DNAJA4,HLA-DPA1,PNP,HMGA1,LST1,KMO,AC005280.2,MMP19,FTL,BAG3,CD300LB,MCTP1,CYTOR,ITGA5,SH3BP5,CD44,HLA-DQB1,SLC5A3,IL20,ANXA5,CKS2,RASGEF1B,LYZ,OTUD1,TXNRD1,IL10RA,AL136987.1,FGL2,EMP3,GPAT3,SDS,TYROBP,KCNN4,HSPA1A,LGALS1,ANKRD37,MAP3K20,PIK3AP1,B4GALT5,CLIC4,GBP2,SOCS3,PLK3,S100A11,GRASP,P2RX7,RHOF,HLA-DRB5,ZEB2,RASGRP3,TXN,HES4,PLSCR1,GBP1,HSPH1,SLC2A3,RGS1,VEGFA,NFKBID,FLT1,SPINK1,RNF19B,BCAT1,TNFRSF12A,PDE4B,REV3L,LINC01588,FCER1G,CD300E,GLRX,AP003354.2,HSPA5,IGSF6,CD300A,LRG1,RDH10,NFATC1,LAPTM5,AREG,IL6R-AS1,MMP7,CD68,F3,CCR1,PTGER4,ZNF267,TSC22D2,SNX10
"A single cell atlas of human cornea that defines its development, limbal progenitor cells and their interactions with the immune cells",33865984,CD8_1_PMID_33865984,T cell,IFNG,IL32,ISG15,CD69,XCL1,AC020916.1,CCL5,REL,IFIT2,PMAIP1,CXCR4,LDLR,MYADM,NKG7,SERPINH1,ICOS,BTG2,OASL,IER5,TUBA1A,TNFSF14,CD7,ZC3HAV1,CXCR6,ALDH3A1,CD3D,GZMB,IRF4,STAT4,CYTIP,GPR65,IFIT3,ANXA1,DUSP2,CD8A,ISG20,XCL2,HIST1H1C,GLS,ZNF267,GZMA,GZMK,BIRC3,CD2,MPZL3,DOK2,CD52,CXCR3,ZC3H12A,CST7,KLRC1,LCP1,UBE2S,HERC5,AC243960.1,RUNX3,TNFAIP3,SOCS1,CRTAM,IL2RB,B3GNT7,PDP1,MARCKSL1,LY6E,PIM1,AQP3,NUSAP1,NFKB1,ELOVL5,PMEPA1,KPNA2,KDM6B,C12orf75,HMGCS1,CLIC3,TWISTNB,LUM,SAMSN1,TRDC,ZFP36,DNAJB4,FAM126A,RHOF,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"A single cell atlas of human cornea that defines its development, limbal progenitor cells and their interactions with the immune cells",33865984,CD8_2_PMID_33865984,T cell,IGHG4,GZMB,CCL5,CD3D,CD2,GZMA,CD52,ETS1,IL7R,CXCR6,CD3G,LTB,PRF1,CD7,ISG20,NKG7,STAT4,LINC01871,CD8A,IL32,IL2RB,RUNX3,TRBC1,GPR65,CST7,PTPRC,CXCR3,GIMAP7,LY6E,AC243960.1,TRBC2,ZEB1,BIRC3,AC004687.1,CYTIP,RHOH,PTTG1,ARL4C,MPZL3,CLIC3,CTLA4,ITM2A,LCP1,IGFBP5,MAST4,CXCR4,CCDC69,SPARCL1,OASL,DUSP2,CD44,UBE2S,PDE4B,RARRES3,GZMK,MYADM,ANXA1,TPX2,PMEPA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"A single cell atlas of human cornea that defines its development, limbal progenitor cells and their interactions with the immune cells",33865984,macrophages_1_PMID_33865984,Macrophage,C1QA,C1QC,CD14,C1QB,AIF1,RNASE1,CD163,MARCO,VSIG4,CYBB,SPP1,FCGR3A,APOE,PLTP,SLCO2B1,TREM2,LYZ,CTSS,SELENOP,HCST,CEBPD,SAA1,TXNIP,PTGDS,SPI1,SERPING1,APOD,MNDA,MRC1,C1orf162,S100A11,MS4A6A,CD74,HCLS1,FCER1G,PTMA,RNASE6,RHOB,CHCHD10,STAB1,FOLR2,HLA-DMB,MS4A4A,MSR1,JUNB,TYMP,HLA-DMA,TYROBP,CD68,HLA-DRB5,CSF1R,LST1,HCK,HLA-DQB1,CFD,DAB2,TMEM176B,HMOX1,LAIR1,KCTD12,GPR34,SLC1A3,HLA-DPA1,FCGBP,HLA-DRB1,DPYSL2,ZFP36L1,CPVL,CTSC,TIMP2,HLA-DPB1,HLA-DQA1,SLAMF8,DDIT4,GYPC,FTL,GATM,IL18,TFRC,MAN1A1,FCGR1A,LGALS1,CTSZ,FYB1,STEAP4,RASD1,GAS6,MID1IP1,HLA-DRA,NNMT,NUPR1,LAPTM5,MEF2C,SLC40A1,ETS2,SLC11A1,FGL2,RGS5,KERA,KLF2,ANGPTL7,CD53,FCGR2B,SLA,AC020656.1,TMEM176A,SERPINF1,MS4A7,GMFG,EGFL7,VAMP5,APP,THBS1,LMO2,LYN,FN1,C3AR1,CSTA,SOD3,MT1E,TMEM70,CITED2,CD86,IFIT1,CXCL12,MPEG1,FCGR2A,TMIGD3,VCAN,CPM,COLEC12,CXCL10,LILRB2,KCNMA1,SNCA,FXYD5,GIMAP4,IFI6,PKIB,RNASE2,LDHB,CFH,COL6A2,TCF4,NRP1,MT1M,ALCAM,MAF,CLEC4E,C1R,APOC1,ENG,SDC3,STMN1,MAFB,FAM198B,S100A9,CLEC5A,GPNMB,RAP2B,PFKFB3,P2RY13,CLIC4,SLC16A3,CDKN1C,TWIST1,IFI27,RGS18,CEMIP,JAML,PLEKHO1,FBP1,P2RY14,FCER1A,PLSCR1,PRRX1,BLNK,THBS4,TICAM1,NFATC2,PECAM1,TCEAL9,PMP22,S100A8,CYBRD1,ADM,FAM213A,IER3,CSF3R,SCD,EXOC6,NCF2,TLR7,GPX3,FLI1,LSP1,SOCS3,COL12A1,OLFML2B,OLFM1
"A single cell atlas of human cornea that defines its development, limbal progenitor cells and their interactions with the immune cells",33865984,macrophages_2_PMID_33865984,Macrophage,MAFB,HSPA6,EGR1,BAG3,HSPA1B,FOS,DNAJB1,JUN,CD83,ZFAND2A,NR4A2,RHOB,RGS2,KLF2,TENT5A,IER2,GADD45B,DNAJB4,OTUD1,HMOX1,CCL3,ATF3,SOX4,IFI30,SELENOP,HSPA1L,CCL4,CITED2,HSPA1A,DNAJA4,KCTD12,DUSP1,IER3,ID3,SGK1,ADM,IER5,VEGFA,MYOC,APOC1,KLF6,SOCS3,HLA-DPA1,ABL2,TRIB1,GPNMB,PFKFB3,CD74,FOSB,SLC20A1,CCL8,TNF,INTS6,RGS1,PLK2,HSPH1,UBB,NFKBIZ,HLA-DRA,MS4A6A,MID1IP1,MSR1,CA2,FCGR2A,ID2,RGS16,IRS2,ICAM1,CEBPD,SLC1A3,LAPTM5,NFKBIA,IER5L,MS4A7,PLIN2,HLA-DPB1,DNAJA1,HLA-DRB5,KLF10,CKS2,HBEGF,ZFP36L1,CCL3L1,CDKN1A,DDIT3,IFRD1,GLDN,APOE,FGL2,MRC1,C5AR1,HSPA8,HLA-DMB,SLC2A3,JUNB,TCF4,CXCL1,LINC00346,KCNQ1OT1,ERN1,DDIT4,SLC38A2,SNX10,HLA-DRB1,B3GNT5,FTL,HLA-DMA,C3AR1,CXCL3,CD163,TSC22D1,FSCN1,SERTAD1,VMP1,PELI1,MMP12,CSF1R,IRF1,PPIF,FCGRT,HHEX,FPR3,ICAM4,MMP19,SLC11A1,TNFRSF10D,FCGR1A,STAB1,RNASE1,FCGR3A,TMEM70,ZFP36L2,PLSCR1,CPM,TNFAIP2,MS4A4A,CLEC4E,MEF2C,IL18,RNASE6,TNFAIP3,HLA-DQB1,G0S2,HCAR2,ERO1B,TMEM176B,PMAIP1,CXCL10,ADORA3,C3,VMO1,TXNIP,LMO4,CXCL2,TSC22D2,IFI44L,IL4I1,CD93,TYROBP,TFEC,HLA-DQA1,GPR34,C1QB,NABP1,GADD45G,HLA-DQA2,FCER1G,OLFML2B,PMP22,RDH10,TFRC,GADD45A,TMEM176A,FAM198B,PECAM1,RSAD2,GRASP,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/Plasma_PMID_37316583,B cell,DERL3,MZB1,JCHAIN,PRDX4,XBP1,SEC11C,FKBP11,FKBP2,IGHG3,IGHG1,ITM2C,IGKC,IGLC2,IGLC3,HSP90B1,IGHA1,SSR4,IGHG4,NUCB2,SPCS3,MANF,SSR3,SDF2L1,MYDGF,IGHG2,PPIB,SPCS1,IGHA2,HSPA5,CD63,LMAN1,IGHGP,PDIA4,HERPUD1,DNAJB9,ERLEC1,RPN2,SEC61B,PDIA6,SPCS2,TMEM258,CRELD2,RABAC1,SDC1,KRTCAP2,PIM2,TNFRSF17,TMEM59,VIMP,P4HB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/MHC-II_PMID_37316583,B cell,HLA-DPB1,HLA-DRA,HLA-DRB1,LAPTM5,HLA-DPA1,LTB,HLA-DQB1,HLA-DQA1,MS4A1,CD52,CD37,COTL1,CORO1A,BANK1,CD69,HLA-DMB,CXCR4,SMIM14,CD53,LIMD2,ARHGDIB,HLA-DMA,BTG1,CD48,SELL,TXNIP,VPREB3,CD79B,CD83,HLA-DRB5,ZFAS1,PTPRC,ACTG1,CD74,MYL12A,REL,ARPC1B,SH3BGRL3,NAP1L1,RAC2,STK17A,GPSM3,LY86,PFN1,GPR183,IFITM2,JUNB,LCP1,TMSB4X,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/Cell-cycle_PMID_37316583,B cell,HMGB2,STMN1,TUBA1B,HMGN2,PTTG1,DUT,NUSAP1,H2AFZ,PCNA,HMGA1,PCLAF,CKS1B,RANBP1,SMC4,HMGB1,TK1,MKI67,LDHA,TYMS,TOP2A,H4C3,HIST1H4C,RAN,TCL1A,UBE2C,ENO1,H2AZ1,CENPM,SLC25A5,MCM7,SNRPD1,AURKB,CDK1,DEK,PKM,ANP32B,ANP32E,BIRC5,CDKN3,CKS2,H2AFV,KPNA2,LRMP,RRM2,ZWINT,SNRPF,H2AZ2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/Stress_PMID_37316583,B cell,CD69,FOS,JUN,CD83,NR4A2,FOSB,IGHD,IGHM,DUSP1,FCER2,FOXP1,TCL1A,ZNF331,ZFP36,GPR183,CD55,FCMR,JUNB,RGS2,YPEL5,CCR7,LINC00926,RHOH,IER2,SELL,SLC2A3,BIRC3,BTG2,LY9,IL4R,ZFP36L2,CLEC2D,HVCN1,PPP1R15A,SNX2,AREG,DUSP2,GADD45B,KLF2,KLF6,ADAM28,CD72,NFKBIA,VPREB3,CD22,CREM,NR4A1,PHACTR1,TSPAN13,VPS37B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/Memory_PMID_37316583,B cell,CRIP1,TNFRSF13B,CAPG,ITGB1,CD99,S100A4,ACP5,CD82,CLECL1,HCST,SCIMP,ANXA2,COTL1,CTSH,VIM,CD27,LGALS1,PLP2,CCDC50,FCRL5,NEAT1,S100A11,S100A10,UBE2N,AIM2,EMP3,S100A6,ARPC1B,LSP1,PTPN1,RGS1,EVI2B,GRN,IFI30,RGCC,SRGN,SUB1,CAPZB,ENTPD1,GPR183,IGHA1,CD86,GSTK1,HOPX,IGFLR1,PLEK,BLK,BHLHE41,ISCU,CXCR3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/Metabolism/MYC_PMID_37316583,B cell,PSME2,ENO1,LDHA,NME1,RANBP1,C1QBP,EIF5A,NHP2,PKM,PRDX1,RAN,FABP5,SNRPD1,VDAC1,HSPD1,PPA1,SNRPE,PA2G4,SNRPF,TUBA1B,CCT3,DDX21,EIF4A1,HMGA1,IMPDH2,LDHB,PRMT1,PSMB3,CALR,HSP90AB1,HSPE1,NME2,PGAM1,TPI1,TXN,ABRACL,ATP5G1,NDUFAB1,PSMA4,SYNGR2,TIMM13,APRT,CCT6A,CD83,ERH,MIF,PRELID1,HNRNPAB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/Germinal Center_PMID_37316583,B cell,LRMP,NEIL1,TCL1A,MARCKSL1,RGS13,RFTN1,BASP1,HMCES,BCL7A,LCP1,LPP,UBE2J1,PRDX6,SYNE2,CD22,FAM3C,HOPX,CCDC144A,KLHL6,PARP1,PRPSAP2,ABRACL,CD40,CD79B,DBI,GCHFR,LAT2,LMO2,POU2AF1,RGS1,TMEM123,BCAS4,DAAM1,GGA2,HMGA1,HMGN1,LCK,MTF2,P2RX5,RNGTT,STAG3,UCP2,JCHAIN,SERPINA9,CCDC88A,SUSD3,GRHPR,ACTG1,PPP2CA,CPNE3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/Interferon_PMID_37316583,B cell,MX1,PLSCR1,SAMD9L,GBP1,GBP4,IFI6,IFIT2,IFIT3,ISG15,MX2,OAS1,PARP9,TNFSF10,CMPK2,IFI35,IFIT1,IRF7,PARP14,SAMD9,STAT1,TRIM22,UBE2L6,USP18,XAF1,APOL6,BST2,HERC5,IFI44,IFI44L,NT5C3A,OAS3,RABGAP1L,RNF213,RSAD2,CHST12,EIF2AK2,LY6E,MNDA,NMI,IFITM1,ISG20,LAP3,MT2A,OAS2,PPM1K,SLFN5,SOCS1,EPSTI1,TAP1,DYNLT1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/Progenitor_PMID_37316583,B cell,SOX4,VPREB1,CD9,IGLL1,CD24,MZB1,SNHG7,STMN1,NEIL1,VPREB3,CD38,PCDH9,CCDC191,CMTM7,DNTT,H1FX,MME,NSMCE1,SSBP2,TCL1A,TOP2B,YBX3,ARPP21,BACH2,BCL7A,CDC25B,EBF1,GLRX,HMGB2,MLXIP,MT1X,NIBAN3,RCSD1,S1PR4,TKT,VDAC1,LDLRAD4,CCDC112,CD99,RGS2,ITM2C,TRAM1,IGLL5,UBE2J1,PTPRE,CD72,TP53INP1,TCF4,TMEM243,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/B-cells1_PMID_37316583,B cell,NKTR,ARGLU1,ATM,RBM6,ARID1B,ATRX,BDP1,BPTF,MDM4,NEAT1,PARP14,SEL1L3,SYNE2,ZNF292,ASH1L,ATF7IP,BIRC3,CD22,CLEC2D,CTNNB1,FTX,HNRNPH1,ITSN2,KMT2A,LNPEP,MBNL1,PCSK7,PSMA3-AS1,RSRP1,SFPQ,STX7,TNRC6B,XIST,TTN,C1ORF56,RASGEF1B,ADAM19,B4GALT1,FAM214A,PRDM2,PPP3CA,GOLGB1,CDC42SE1,TUT4,IKZF3,CDK13,CCNL1,OGA,SET,ANKRD11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/Respiration_PMID_37316583,B cell,PPIB,H2AFZ,JCHAIN,ATP5G3,COX7B,HMGB1,RAN,CYCS,HSPE1,LGALS1,PDIA6,PPIA,SNRPD2,SNRPG,ATP5I,ATP5J2,CHCHD2,COX6C,DBI,GLRX,IGHA1,LSM3,NDUFS5,NOP10,NPM1,POLR2L,PRDX1,PSME2,SEC61B,SSR3,COX6B1,POMP,ATP5O,COX7A2,PTMA,CLIC1,BTF3,SSR2,ANXA2,TMSB10,PPA1,TMA7,NME1,TXN,ATP5J,UQCRH,NDUFB3,SUB1,HN1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,B cells/HSP/Stress_PMID_37316583,B cell,CACYBP,HSPA1B,CD69,DNAJB1,HSPB1,NR4A1,DEDD2,FKBP4,HSPA1A,HSPA6,HSPD1,CCR7,CHORDC1,DNAJA1,EGR1,EGR3,HSP90AA1,HSP90AB1,HSPE1,HSPH1,JUN,KLF6,MYC,NFKBID,SLBP,STIP1,TAF7,UBC,ZFAND2A,PMAIP1,CCL4,UBB,NFKBIA,NUDC,SLC5A3,AHSA1,IGHA1,ANKRD12,IER2,SMIM14,HSPA8,DUSP2,FOS,MIR155HG,BCL2A1,CD83,DDX5,DNAJB4,IGHG1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/Lipid-associated_PMID_37316583,Macrophage,APOE,C1QB,LGMN,APOC1,C1QC,C1QA,GPNMB,RNASE1,PLD3,LIPA,PLTP,FOLR2,NUPR1,CTSD,SLC40A1,ACP5,A2M,MS4A4A,TREM2,DAB2,SLCO2B1,CTSL,CCL18,SEPP1,CFD,FUCA1,SPP1,TMEM176B,PLA2G7,CD163,FCGR3A,CD59,C2,CYP27A1,GM2A,IFI27,MSR1,CD14,GPR34,NPL,CTSC,CREG1,VSIG4,LGALS3,STAB1,CD9,GCHFR,ASAH1,CCL3,F13A1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/Monocyte/Secreted_PMID_37316583,Macrophage,IL1B,CXCL2,G0S2,CXCL8,CXCL3,S100A8,BCL2A1,FCN1,VCAN,IER3,CCL3,EREG,TIMP1,CCL20,S100A9,TNFAIP3,AREG,CCL4,SLC2A3,SOD2,IL1RN,PLAUR,NFKBIA,DUSP2,GPR183,THBS1,CCL3L3,OLR1,NAMPT,CCL4L2,C15ORF48,NLRP3,PTGS2,TREM1,CD83,HBEGF,NFKBIZ,NR4A2,CD55,LYZ,SLC11A1,ATF3,FOSB,SAMSN1,SOCS3,PLIN2,SLC25A37,RGS2,AQP9,PPP1R15A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/Cell-cycle_PMID_37316583,Macrophage,STMN1,CKS1B,HMGB2,TK1,PTTG1,PCNA,H2AFZ,HMGN2,TUBA1B,TYMS,DUT,SMC4,HIST1H4C,CDK1,CKS2,NUSAP1,UBE2C,BIRC5,DTYMK,KIAA0101,ZWINT,DEK,RANBP1,HMGB1,SMC2,TMEM106C,CENPW,RPA3,IDH2,KPNA2,MKI67,TOP2A,GGH,HMGB3,CENPF,MCM7,PCLAF,NUCKS1,CDKN3,CARHSP1,TMPO,SKA2,H2AFV,H2AZ1,ANP32E,CENPM,DNMT1,H4C3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/Interferon_PMID_37316583,Macrophage,CXCL10,ISG15,GBP1,IFIT3,MX1,TNFSF10,IFIT2,ISG20,EPSTI1,GBP5,IFI35,IFIT1,IFI44L,STAT1,CXCL11,GBP4,IL4I1,RSAD2,IFI6,IFITM1,SAMD9L,UBE2L6,CXCL9,IFITM3,OAS1,TAP1,VAMP5,APOBEC3A,LAP3,WARS,IRF7,PARP14,MX2,PPA1,IDO1,LY6E,MT2A,ANKRD22,IFI27,CCL2,NT5C3A,PSME2,CCL8,FAM26F,PSMB9,SERPING1,GBP2,OAS2,TNFSF13B,RARRES3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/MES/Glycolysis_PMID_37316583,Macrophage,SPP1,GPNMB,S100A10,FABP5,CSTB,LGALS1,S100A6,C15ORF48,FN1,ANXA2,PLIN2,FBP1,S100A9,S100A8,NUPR1,HK2,LGALS3,MIF,MT1X,MT2A,RGCC,S100A4,ADM,BNIP3,VCAN,VIM,MT1G,APOC1,MARCO,EMP3,TIMP1,CD9,NDRG1,ENO1,LDHA,RNASE1,LSP1,UPP1,SDC2,SLC2A3,CD52,CTSL,SCD,ERO1A,P4HA1,ADAM8,ANXA1,MT1E,RALA,SLC2A1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/MAC1_PMID_37316583,Macrophage,FCN1,CD52,FCGR3A,IFITM2,CFP,LILRB2,LINC01272,LILRA5,S100A4,S100A9,SERPINA1,TIMP1,WARS,IFITM3,S100A8,CORO1A,PLAC8,STXBP2,CFD,LST1,CYTIP,RHOC,FGR,TCF7L2,CLEC12A,COTL1,NAAA,POU2F2,ABI3,BCL2A1,CD48,CDKN1C,LILRA1,LRRC25,LYST,MYO1G,RAC2,SPN,CD55,CRIP1,APOBEC3A,HES1,LTA4H,LY6E,MAFB,MS4A7,MT2A,MTSS1,HCK,VAMP5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/Stress/HSP_PMID_37316583,Macrophage,JUN,DNAJB1,HSPA1B,HSPA1A,FOS,GADD45B,HSPH1,HSPA6,RGS2,HSPB1,IER2,RHOB,ATF3,BAG3,EGR1,HSPD1,HSP90AA1,DNAJA4,FOSB,NR4A1,JUNB,DNAJA1,KLF6,SGK1,DUSP1,IER5,MAFB,RGS1,ZFP36L2,KLF2,HSP90AB1,HSPE1,KLF4,TSC22D3,ZFAND2A,CCL3,HSPA8,CCL4,CLK1,DDIT4,NR4A2,PPP1R15A,UBC,BTG2,CACYBP,CXCR4,ZFP36,MALAT1,FKBP4,PMAIP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/MAC2_PMID_37316583,Macrophage,FABP4,MARCO,RBP4,PCOLCE2,INHBA,CES1,CCL18,CD52,FN1,GCHFR,LPL,MCEMP1,PHLDA3,PPARG,IFI27,NUPR1,S100A13,SERPING1,ALDH2,GYPC,LGALS3BP,SCD,ACOT7,CYP27A1,LTA4H,NMB,PDLIM1,AQP3,FBP1,MGST1,PPIC,RETN,RP5-839B4.8,VMO1,ALOX5AP,GPD1,SERPINA1,TCF7L2,FAM89A,FHL1,IGFBP2,PLA2G16,RND3,STXBP2,TGM2,TREM1,AGRP,AKR1C3,UBASH3B,HDDC2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/Proteasomal-degradation_PMID_37316583,Macrophage,NME1,FABP5,HSPA5,CCT5,MANF,SDF2L1,PRDX1,PSMA4,SPP1,ATP6V0D1,FBP1,MDH1,VSIG4,CALR,MYDGF,PDIA6,PSMD8,SLC3A2,TREM2,LGALS3,LRPAP1,MARCO,PSMA3,PSMD7,PSME2,S100A8,CTSL,CYP27A1,GCHFR,MNDA,PSMB6,TUBA1B,DNASE2,FCGR1A,HM13,LTA4H,MGST3,PSMA5,PSMC2,PSMC3,RENBP,PLA2G7,CCL2,FPR1,S100A9,GLIPR2,NAGK,TUBA1A,HSP90B1,CD9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/MAC3_PMID_37316583,Macrophage,C3,OLFML3,C1QC,C1QB,PLD4,FCGBP,GPR34,LPAR6,CCL3,CCL4,C1QA,LTC4S,RGS1,ALOX5AP,AXL,CCL4L2,GIMAP4,CCL3L3,FCGR3A,TREM2,YWHAH,HTRA1,USP53,CX3CR1,CXCR4,BTG2,CD14,CD69,CD9,CSF1R,HERPUD1,HLA-DQA1,IL1B,MEF2C,SLCO2B1,ABI3,ADAM28,C10ORF54,CD93,EPB41L2,ETV5,IFI44L,IFNGR1,RB1,ENTPD1,STAB1,A2M,MARCKS,MAFB,FAM26F,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/MYC/Mitochondria_PMID_37316583,Macrophage,NME1,NHP2,C1QBP,PHB,SDF2L1,DCTPP1,SRM,CCT2,CORO1A,FABP5,PA2G4,SPP1,APEX1,RANBP1,ATP5MC1,CCT5,CCT6A,EBNA1BP2,EIF5A,NOP16,PPA1,TIMM13,TOMM40,ALOX5AP,BOLA3,HSPA5,HSPD1,LDHB,RRP7A,C20ORF27,CCT3,CLEC5A,CYC1,GGCT,KCNN4,MANF,PPP1R14B,PSMC4,SNRPD1,ISOC2,CCDC85B,PDCD5,HNRNPAB,PRMT1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/Unfolded-protein-response_PMID_37316583,Macrophage,HSPA5,MANF,HSP90B1,SDF2L1,OSTC,PDIA4,PDIA6,SPCS2,CRELD2,DNAJB9,TMED2,TRAM1,VIMP,HM13,LMAN1,NDRG1,NUCB2,PDIA3,SEC11C,SELM,SNHG12,TMEM45A,ADM,ARF4,CALR,DNAJB11,ISG15,LY6E,PPIB,SLC3A2,SMIM14,TMEM258,TXN,WARS,HYOU1,SDC2,CDK2AP2,GBP2,AARS,TAP1,EGLN3,SLC33A1,DNAJC1,SSR2,ZFAS1,XPOT,MT2A,HMOX1,DDIT3,CALU,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,Macrophages/Respiration_PMID_37316583,Macrophage,ISG15,CCL2,COX7B,NDUFB2,POLR2L,S100A8,ATOX1,ATP5J2,BLVRB,CHCHD10,FABP5,NDUFA3,NDUFS6,PSME2,RBX1,TIMM8B,UQCRQ,VAMP5,RNASE1,HCST,MYEOV2,CALM3,S100A9,C4ORF48,DNPH1,TXN,CXCL9,STAB1,HAMP,NDUFB7,TXNDC17,DAB2,BRI3,CTSZ,SLIRP,UQCC2,ATP5EP2,DUSP23,HSPE1,IFI27L2,C19ORF70,GADD45GIP1,COX6C,ATP5I,HMOX1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD4 T cells/T_reg_PMID_37316583,T cell,IL2RA,TNFRSF18,TNFRSF4,TIGIT,BATF,CD27,CARD16,FOXP3,CTLA4,TNFRSF1B,PMAIP1,CTSC,LAIR2,TNFRSF9,GLRX,DNPH1,TBC1D4,DUSP4,GBP2,ICOS,MAGEH1,TYMP,CXCR6,CD7,CST7,SAT1,GADD45A,IL1R2,GBP5,UGP2,AC133644.2,UCP2,PIM2,LAYN,PKM,RTKN2,ACP5,MIR4435-2HG,ARID5B,PHLDA1,IL2RB,SYNGR2,LTB,CASP1,HLA-DRB1,IFI6,NAMPT,CORO1B,LGALS1,BTG3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD4 T cells/Naive1_PMID_37316583,T cell,ANXA1,FOS,CD69,CCR7,GPR183,KLRB1,IL7R,GIMAP7,CXCR4,SLC2A3,BTG2,CD55,YPEL5,ZFP36L2,NR4A2,GIMAP4,PTGER4,ALOX5AP,TRAT1,DUSP1,FOSB,CCL5,DNAJB1,TXNIP,SELL,KLF2,GPR171,GZMA,PLAC8,CD48,JUN,TCF7,PPP2R5C,AREG,RGCC,FOXP1,FAM177A1,NOSIP,RARRES3,LMNA,SNHG8,ZNF331,DUSP2,IER2,JUNB,SOCS3,TMEM123,TOB1,ZFP36,LEPROTL1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD4 T cells/Cell_cycle_PMID_37316583,T cell,STMN1,TUBA1B,NUSAP1,HMGB2,CKS1B,TYMS,UBE2C,MKI67,TOP2A,PCNA,TK1,ZWINT,BIRC5,CDK1,HIST1H4C,DUT,CENPF,HMGN2,MAD2L1,CENPM,SMC4,SMC2,RRM2,MCM7,CDKN3,PTTG1,KIAA0101,CKS2,NUDT1,TMEM106C,UBE2T,ASF1B,DNAJC9,H2AFZ,CENPW,ASPM,DTYMK,FEN1,PCLAF,TPX2,AURKB,TMPO,TUBA1C,DDX39A,KPNA2,PHF19,KIF22,CCNA2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD4 T cells/Cytotoxic_PMID_37316583,T cell,CCL5,GZMA,CCL4,ID2,CST7,GZMB,GZMH,ALOX5AP,NKG7,APOBEC3G,HLA-DRB1,IFNG,GZMK,PRF1,CXCR6,LGALS1,RBPJ,GNLY,KLRB1,HOPX,HLA-DPB1,AC092580.4,CTSD,CXCL13,CKLF,HLA-DPA1,CLEC2B,CTSW,HLA-DRA,CD99,ANXA1,PDCD1,CCL4L2,C12ORF75,CD6,COTL1,LINC00152,ANXA2,DUSP4,GZMM,ANKRD28,CCL3,CD63,CD96,LAG3,ITGB2,PLIN2,ZEB2,JUN,BHLHE40,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD4 T cells/Dysfunction_PMID_37316583,T cell,NR3C1,CXCL13,FKBP5,ITM2A,RNF19A,ICA1,SH2D1A,TIGIT,PPP1CC,IL6ST,LIMS1,NMB,TSHZ2,KLRB1,PDCD1,TOX2,MAGEH1,SMCO4,ALOX5AP,FABP5,MAF,RBPJ,NAP1L4,SLA,TOX,BTLA,CD200,CPM,RGS2,SESN1,CD84,PASK,TBC1D4,THADA,AKAP13,C9ORF16,CD40LG,CHI3L2,CHN1,DUSP4,YWHAQ,CORO1B,COTL1,TCF7,TNFRSF18,PCAT29,PVALB,SFXN1,NUDT16,AHI1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD4 T cells/Interferon_PMID_37316583,T cell,ISG15,IFIT1,MX1,RSAD2,IFI44L,CMPK2,HERC5,IFIT2,IFIT3,IRF7,MX2,OAS1,OASL,EIF2AK2,OAS2,SAMD9,USP18,GBP1,IFI6,ISG20,PPM1K,SAMD9L,STAT1,TRIM22,IFI44,MT2A,NT5C3A,OAS3,IFI35,TNFSF10,UBE2L6,XAF1,EPSTI1,LY6E,PARP9,PLSCR1,ZBP1,HELZ2,PARP14,RBCK1,SHFL,SP110,STAT2,DDX58,HSH2D,PALM2-AKAP2,PARP10,RTP4,CHST12,LAP3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD4 T cells/Glycolysis/MYC_PMID_37316583,T cell,NME1,RANBP1,CCT5,EIF5A,FABP5,C1QBP,NHP2,PDCD5,PPA1,PRMT1,SRM,TNFRSF4,IL2RA,SMS,ATP5G1,DUT,PKM,TIMM13,TNFRSF18,TXNDC17,DCTPP1,DDX21,HSPD1,NOLC1,PGAM1,PHB,SNRPD1,EBNA1BP2,IL1R2,PAICS,PCNA,PRDX1,SNRPE,CCND2,CCT2,CCT3,LSM2,LSM5,NDUFAB1,NDUFB3,TNFRSF9,TXN,SSBP1,DNPH1,TOMM40,EIF5B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD4 T cells/Naive2_PMID_37316583,T cell,CCR7,LEF1,MAL,SELL,KLF2,MYC,NOSIP,C6ORF48,PLAC8,PRKCQ-AS1,SNORA76,TCF7,TRAT1,APEX1,C1ORF162,GIMAP5,LINC00861,PRKCA,RSL1D1,CCDC109B,EPB41L4A-AS1,FAM65B,GIMAP1,GIMAP2,ICAM2,ITGB1,KLRB1,LPAR6,RASGRP2,SATB1,SH3BP5,ST13,TIMP1,TMEM243,TRABD2A,FHIT,CD27,TAGAP,ALKBH7,FOXP1,SNHG7,RIC3,IL6ST,TSHZ2,SMDT1,EIF2S3,PIM2,PRMT2,CREBRF,SORL1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD4 T cells/Unassigned_PMID_37316583,T cell,ARPC4,CKLF,LGALS1,ALOX5AP,CAP1,LTB,S100A4,CORO1B,EMP3,LY6E,PKM,ANXA6,ARPC1B,ARPC5,C9ORF16,DBI,LSP1,PRELID1,TRAPPC1,ANXA2,APRT,ATP5J,CLIC1,COTL1,ISG15,KLRB1,LCP1,LGALS3,MT2A,PARK7,PSME2,S100A10,SEC61G,UCP2,BRK1,ID2,COPS9,PPP1CA,CORO1A,TXN,TSPO,IFI27L2,LCK,NEDD8,PRDX1,DAD1,APOBEC3G,YWHAQ,GZMA,ANXA5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD4 T cells/Stress/HSP_PMID_37316583,T cell,DNAJB1,FKBP4,DNAJA4,HSPA1B,HSPD1,HSPH1,ZFAND2A,AHSA1,BAG3,CACYBP,DEDD2,HSP90AA1,HSPA1A,HSPA6,HSPE1,SERPINH1,SQSTM1,CLK1,DNAJA1,DNAJB4,DOK2,DUSP1,HSPB1,ID2,PLIN2,REL,RGS2,TCP1,TSPYL2,JUN,PPP1R15A,JUNB,HSP90AB1,MYLIP,TRA2B,CHORDC1,SOCS3,BTG2,NUDC,ODC1,IRF1,PMAIP1,ANXA1,GADD45B,HBP1,FABP5,CCL20,NEU1,GEM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Cytotoxic_PMID_37316583,T cell,GZMB,GZMH,PRF1,CCL4,GNLY,GZMA,ALOX5AP,CCL4L2,KLRD1,CD63,HOPX,NKG7,CST7,GZMK,CCL3,APOBEC3G,IFNG,CXCR6,HLA-DRA,CMC1,HLA-DRB1,TIGIT,CXCL13,LAG3,CTSW,LGALS1,RGS1,HLA-DPA1,KLRB1,CD27,ITGB2,DUSP2,CTSD,DUSP4,HAVCR2,SAMSN1,ITM2C,TRGC2,ZNF683,HLA-DPB1,CAPG,KLRG1,RBPJ,AC092580.4,ITM2A,CD7,CKLF,KLRC1,RGS2,ID2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Cell_cycle_PMID_37316583,T cell,STMN1,TUBA1B,HMGB2,CKS1B,NUSAP1,PCNA,TYMS,DUT,UBE2C,HMGN2,SMC4,TOP2A,HIST1H4C,CDK1,MKI67,CENPF,KIAA0101,BIRC5,CKS2,PTTG1,ZWINT,MAD2L1,RANBP1,TK1,MCM7,CENPM,RRM2,SMC2,DNAJC9,TMPO,RPA3,CDKN3,H2AFZ,UBE2T,AURKB,TMEM106C,ASPM,NUDT1,KIF22,H2AFV,DEK,SIVA1,PCLAF,FABP5,CCNA2,DDX39A,TPX2,CARHSP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Memory/Naive1_PMID_37316583,T cell,FOS,IL7R,DUSP1,GPR183,LTB,JUNB,BTG2,FOSB,NFKBIA,DNAJB1,YPEL5,ZNF331,GZMK,CD69,ANXA1,RGCC,PPP1R15A,LMNA,DUSP2,NR4A2,SLC2A3,TNFAIP3,CCR7,CD55,TXNIP,MYADM,ZFP36,JUN,BIRC3,DNAJA1,GADD45B,IER2,SNHG8,AREG,SELL,EIF3E,LEPROTL1,TUBA4A,CREM,TMEM123,FAM177A1,KLF6,PIK3IP1,PIK3R1,TOB1,TSC22D3,RGS2,RGS1,CXCR4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Interferon_PMID_37316583,T cell,MX1,ISG15,IFI6,OASL,IFI44L,RSAD2,IFIT3,OAS1,STAT1,PLSCR1,SAMD9L,TNFSF10,IFI35,IFIT1,GBP1,HERC5,ISG20,USP18,IFI44,IFIT2,IRF7,NT5C3A,SAMD9,TRIM22,UBE2L6,EPSTI1,MX2,BST2,EIF2AK2,OAS3,XAF1,CMPK2,MT2A,PPM1K,PARP14,OAS2,IFI16,LGALS9,NMI,PARP9,CD38,HELZ2,LAP3,LY6E,SP110,IFIH1,SAT1,TYMP,DDX58,ZBP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Unassigned1_PMID_37316583,T cell,GIMAP7,GIMAP4,GZMK,ATRX,TXNIP,TRAF3IP3,ARGLU1,KIAA1551,KLRG1,MPHOSPH8,BTN3A2,CMC1,PNISR,TBC1D10C,DDX17,IKZF3,N4BP2L2,PPP1R18,SAMD3,AKAP9,CAP1,CD27,FYB,GIMAP1,IL7R,LCK,NKTR,PTP4A2,STK17A,TRGC2,APMAP,EVL,GCC2,ITGB2,LIMD2,MBNL1,PIK3IP1,PRPF38B,RNF213,SH2D1A,SYNE2,HLA-F,KLRB1,PLEK,UCP2,PRPF4B,POLR2J3,GPSM3,HLA-DRB1,MBP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Naive2_PMID_37316583,T cell,SELL,TMEM123,CCR7,LTB,NOSIP,EIF3L,IL7R,RSL1D1,TCF7,KLF2,LDHB,LEF1,PIK3IP1,MAL,SATB1,SNHG8,CD55,FAM65B,PLAC8,C6ORF48,FOXP1,LDLRAP1,PRKCQ-AS1,TXK,AQP3,CD27,EIF2S3,EIF3E,FAIM3,NDFIP1,PPA1,ALKBH7,EIF3D,GIMAP1,MYC,NUCB2,PHB2,PRKCA,PRMT2,RASGRP2,RCAN3,SNHG7,SORL1,ST13,UXT,TXNIP,AIF1,ERP29,TRAT1,ATP5A1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Glycolysis/MYC_PMID_37316583,T cell,FABP5,NME1,C1QBP,RANBP1,EIF5A,NHP2,PKM,TNFRSF9,CXCL13,SNRPE,ATP5G1,CCT2,ENO1,PGAM1,PRDX1,PRMT1,TNFRSF18,XCL2,CRTAM,PPA1,RAN,VDAC1,XCL1,CCT5,CCT6A,HSP90B1,NDUFAB1,NFKBIA,PARK7,BIRC3,DCTPP1,DNPH1,EIF3I,FBL,GTF3C6,HSP90AB1,ILF2,PHB,SEC11C,TIMM13,TXNDC17,CALR,DUT,TNIP2,BATF,LSM5,BANF1,IMPDH2,NOP16,SNRPD1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Chromatin_PMID_37316583,T cell,NEAT1,SYNE2,MACF1,AHNAK,GOLGB1,KMT2A,AKAP9,ANKRD11,NKTR,SMG1,SYNE1,ATRX,DDX17,GPRIN3,SMCHD1,UTRN,ZNF292,AKNA,ARGLU1,CHD2,ITGA4,PCSK7,PHF3,ROCK1,RORA,ATF7IP,ATM,BPTF,CBLB,DDX6,DYNC1H1,FYN,LINC-PINT,MYH9,NUFIP2,OGA,PDE3B,RESF1,RP11-138A9.1,SETX,XIST,SLFN5,EML4,GCC2,IKZF3,BDP1,RASGRP1,GOLGA4,CEP350,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Unassigned2_PMID_37316583,T cell,COTL1,PPP1CA,PSME2,ARPC1B,FKBP1A,LGALS1,CAP1,ENO1,MT2A,TPI1,PARK7,S100A4,APOBEC3G,ARPC5,CAPZB,CORO1A,EMP3,PKM,PPP1R18,ANXA5,ARPC4,ATP5G3,CALM3,CLIC1,GZMA,GZMH,LSP1,PGAM1,PSME1,S100A11,STMN1,TXN,BLOC1S1,C12ORF75,CAPG,CKLF,IL32,MYL12A,PSMA7,RAC2,SLC25A5,SNRPE,TBC1D10C,CD52,SH3BGRL3,ITM2C,PFN1,LY6E,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Heat_shock_PMID_37316583,T cell,HSPA1B,HSPH1,HSPA1A,HSPA6,HSPB1,ZFAND2A,CACYBP,HSPD1,AHSA1,DNAJA1,HSPE1,PPP1R15A,SERPINH1,TSPYL2,BAG3,DNAJB1,HSP90AA1,IFNG,DEDD2,FKBP4,HSP90AB1,NEU1,RGS2,CHORDC1,DNAJA4,DOK2,GADD45B,NUDC,BATF,CLK1,NR4A1,NR4A2,PMAIP1,RHOB,SQSTM1,TAF7,TCP1,TNFSF14,JUN,DUSP1,CCL3,CCL4L2,STIP1,FOSB,DUSP4,HSPA4,ANKRD37,TXNIP,PTGES3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Naive3_PMID_37316583,T cell,KLRB1,LTB,RORA,IL7R,NCR3,SPOCK2,TMIGD2,CCR6,CTSH,FKBP11,CCL20,HPGD,IL4I1,LST1,ALOX5AP,AQP3,CEBPD,CXCR6,GNA15,GPR171,GPR65,JAML,ODF2L,PERP,RBMS1,TANK,TNFRSF25,FURIN,IFI44,IFNGR1,LGALS3,PHACTR2,RBPJ,ANKRD28,NINJ1,ERN1,TNFSF13B,NFKBIA,TTC39C,CELF2,HOPX,MAF,GNLY,SATB1,CERK,GPX1,PFKFB3,TNFRSF18,PRDM1,SNX9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Pan-cancer atlas of intratumour heterogeneity,37316583,CD8 T cells/Dysfunction_PMID_37316583,T cell,TNFRSF18,ARID5B,BATF,NR3C1,TIGIT,CXCL13,PKM,TNFRSF4,UCP2,C9ORF16,CD27,DNPH1,BIRC3,CTLA4,LTB,PARK7,PMAIP1,TNFRSF9,CNIH1,DUSP4,GBP2,IL6ST,ITM2A,NFKBIA,PEBP1,PGAM1,SPOCK2,TBC1D4,CD82,CORO1B,GEM,ICA1,IL7R,KLRB1,MAF,MAGEH1,RBPJ,SNX9,STAT3,AP2M1,CCR7,CHN1,CRTAM,EIF3I,FKBP1A,FKBP5,GPX4,HSPB1,ICOS,IGFLR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD8+ Clusters _Cluster1_PMID_31924475,T cell,STMN1,TUBA1B,HIST1H4C,HMGB2,UBE2C,TOP2A,NUSAP1,TYMS,H2AFZ,KIAA0101,CKS1B,MKI67,BIRC5,RRM2,HMGN2,CENPF,CKS2,CDK1,AURKB,SMC4,HMGB1,PCNA,KPNA2,H2AFX,ASPM,ZWINT,CCNA2,TK1,CDC20,PTTG1,H2AFV,MAD2L1,DUT,CCNB2,ARL6IP1,UBE2S,CDKN3,GTSE1,ASF1B,KIF22,TPX2,HN1,MT2A,CENPW,TMPO,CENPA,CENPM,DLGAP5,SPC25,UBE2T,SMC2,ANP32E,DEK,CALM3,TUBA1C,CCNB1,MXD3,RAN,CARHSP1,NUCKS1,PLK1,CALM2,LMNB1,KIF20B,LGALS1,TACC3,CDCA5,PTMA,ANP32B,HMMR,DTYMK,RANBP1,CCL3,CDCA8,RAD21,TMEM106C,NUF2,COX8A,MCM7,TPI1,PRC1,YWHAH,DDX39A,FEN1,NUDT1,DNAJC9,EZH2,SAC3D1,KIFC1,GGH,SLC25A5,CDCA3,CENPE,RACGAP1,CDKN2C,HMGB3,H2AFY,HLA-DRA,SAE1,SIVA1,ARHGAP11B,ANAPC11,CENPN,RPA3,CDT1,LSM5,KIF23,CLSPN,SKA2,HNRNPAB,HNRNPA2B1,CEP55,FABP5,SGOL2,KIF2C,SNRPG,AURKA,MAD2L2,TROAP,BUB3,CDCA4,KLRC1,CCL4L2,CCDC34,ATAD2,NDC80,SRSF3,RHEB,IFI16,VIM,MZT2B,HMGN1,IFI6,FBXO5,CENPU,USP1,SNRPD1,PHF19,ACTG1,IDH2,CCL3L3,HLA-DRB1,RAD51AP1,LSM4,SGOL1,GZMA,LDHA,CKAP2L,SPC24,NAA38,KIF11,UBB,RRM1,MZT1,SNRPB,HNRNPF,WDR34,SMC3,PBK,HJURP,PSMC3,NASP,ERH,PKM,CENPK,NCAPG,MTHFD2,TCF19,YEATS4,RALY,CCDC167,LBR,UHRF1,BANF1,SLBP,CBX3,ID3,PKMYT1,HSPB11,CRIP1,ARHGAP11A,SNRNP25,PPIA,PSMB9,DCTN3,HIRIP3,GNG5,HNRNPA3,ZDHHC12,FAM111A,TPM4,GNLY,BUB1,CASC5,CFL1,MCM3,EIF4A3,ENO1,PSMA4,DHFR
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD8+ Clusters _Cluster2_PMID_31924475,T cell,ISG15,IFI6,MX1,IFIT3,IFIT1,IFI44L,OAS1,ISG20,NT5C3A,RSAD2,CMPK2,HERC5,USP18,PLSCR1,LY6E,EPSTI1,MT2A,IRF7,OASL,IFI44,CXCL13,MX2,TYMP,IFI35,BST2,TNFSF10,CCL4L2,SAMD9L,IFITM1,STAT1,OAS3,CXCL8,CCL3,PPM1K,EIF2AK2,SAT1,LAG3,UBE2L6,GZMB,IFI16,SAMD9,GBP1,LAP3,HELZ2,IFNG,TRIM22,DRAP1,CHMP5,XAF1,C19orf66,PSMB9,LGALS9,CCL3L3,PARP9,CHST12,COX5A,IFITM2,OAS2,RNF213,SPATS2L,ZBP1,IFITM3,CCL4,IGHG3,CD164,SP100,NMI,TAP1,PARP14,CARD16,PHF11,LGALS1,SP110,HLA-DRA,HSH2D,S100A11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD8+ Clusters _Cluster3_PMID_31924475,T cell,CXCL13,TNFRSF4,TNFRSF18,CTLA4,AC133644.2,ICOS,IGLC2,SPOCK2,CD4,SRGN,DUSP4,TNFRSF25,BATF,SNX9,CXCR6,BIRC3,PKM,MAF,LAIR2,CD2,DNPH1,CREM,TYMP,PDCD1,RBPJ,ENTPD1,CORO1B,CD82,ZFP36L1,TMEM173,SAMSN1,HSPA1A,PHLDA1,RGS1,CCL3,PIM2,TRAC,TIGIT,PBXIP1,S100A11,TNFRSF1B,LTB,GBP2,LAG3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD8+ Clusters _Cluster4_PMID_31924475,T cell,KRT86,RGS1,ANKRD28,ENTPD1,AC092580.4,KLRC2,AC002331.1,ALOX5AP,KLRC1,GZMB,JAML,CD63,CTLA4,NBL1,HLA-DRB5,ZNF683,RBPJ,ITGAE,CD7,CCL3,TIGIT,CTSW,SPRY1,CTSD,DUSP4,TMIGD2,HLA-DQA2,RGS2,ID2,CAPG,TNFRSF9,KIR2DL4,RP11-291B21.2,CD9,HAVCR2,LAYN,PHLDA1,SAMSN1,SRGAP3,PTPN22,TPI1,ACP5,HLA-DQA1,CD96,SIRPG,GALNT2,CD8A,LAG3,HLA-DRA,TNFRSF18,TRAC,CCL5,CXCL13,HOPX,IFNG,HLA-DRB1,PTMS,GZMA,FAM3C,IL2RB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD8+ Clusters _Cluster5_PMID_31924475,T cell,IGHA1,CCL4L2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD8+ Clusters _Cluster6_PMID_31924475,T cell,GZMK,CHI3L2,CD27,IGKC,ITM2C,ITM2A,GIMAP7,SH2D1A,DENND2D,CLDND1,TRAT1,GIMAP4,COTL1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD8+ Clusters _Cluster7_PMID_31924475,T cell,FOS,DUSP1,ZFP36,JUN,JUNB,FOSB,IL7R,CXCR4,NFKBIA,TNFAIP3,ZFP36L2,DNAJB1,BTG2,PPP1R15A,DUSP2,CD69,KLF6,TSC22D3,IER2,KLRB1,NR4A2,LTB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD8+ Clusters _Cluster8_PMID_31924475,T cell,FGFBP2,FCGR3A,PLAC8,NKG7,GZMH,SPON2,KLRF1,GNLY,KLF2,TYROBP,FCRL6,KLRG1,KLRD1,TXNIP,EFHD2,ADGRG1,ITGB2,MYO1F,BIN2,MATK,HOPX,KLF3,LITAF,FLNA,AES,PTGER2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Tconv Clusters _Cluster1_PMID_31924475,T cell,PDCD1,ITM2A,ICA1,TIGIT,RP5-1028K7.2,SRGN,TOX2,H2AFZ,SMCO4,PVALB,CHI3L2,PASK,SH2D1A,CORO1B,MAGEH1,TBC1D4,COTL1,MAF,C9orf16,PPP1CC,TRBC1,PCAT29,LIMS1,ICOS,IKZF3,RP11-455F5.5,TOX,CXCR5,SCGB3A1,CD79A,LAT,HSPA1A,CD2,NR3C1,FAM43A,PTPRC,RAB27A,NDUFB2,HLA-A,DYNLL1,TRAC,IGKC,ZFP36L1,GPX1,PKM,CD40LG,NFATC1,IL16,BATF,CD3D,RAP1A,DHRS7,FABP5,FKBP5,SIRPG,SPCS2,RNF19A,TRBC2,CD27,RGS2,CTSA,CD74,RAC2,CD82,IGHM,CDK2AP2,ALOX5AP,NUCB2,ST8SIA1,CTLA4,IFI16,PGAM1,PFN1,RILPL2,GBP2,PTPN7,FYN,IL6ST,TNFRSF4,SH3KBP1,NAP1L4,DENND2D,H3F3A,TMBIM6,ATPIF1,ACTG1,IGHG3,SELT,SAT1,LBH,CTSB,TMCO1,PARP1,SPOCK2,PARK7,CTSC,CD59,UQCRC2,WDR83OS,OAZ1,NDUFB1,HSP90AA1,SHFM1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Tconv Clusters _Cluster3_PMID_31924475,T cell,LGALS1,S100A4,ANXA2,S100A9,S100A10,CRIP1,IL32,LYZ,SH3BGRL3,S100A8,S100A6,ITGB1,CD52,LINC00152,MYO1F,HLA-DRB1,EMP3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Tconv Clusters _Cluster4_PMID_31924475,T cell,IGHA1,IGLC2,IGKC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Tconv Clusters _Cluster5_PMID_31924475,T cell,S100A4,CCL5,ANXA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Tconv Clusters _Cluster6_PMID_31924475,T cell,HSPA1B,FOS,JUN,DUSP1,IGKC,KLF6,DNAJB1,CITED2,GPR183,CD69,HIST1H4C,HSP90AA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Tconv Clusters _Cluster7_PMID_31924475,T cell,ZFP36,LMNA,JUN,TNFAIP3,RGS1,NFKBIA,FOS,FOSB,CREM,KLF6,PPP1R15A,NR4A2,RGCC,DUSP1,DUSP2,CD69,IER2,FTH1,ISG15,JUND,CSRNP1,YPEL5,MCL1,GADD45B,SAT1,IDS,ANXA1,JUNB,SRGN,MYADM,CCL5,BTG2,TSC22D3,DNAJB1,IRF1,PMAIP1,CXCR4,ZFP36L2,IFI6,HSP90AA1,SLC2A3,ID2,MT2A,PTGER4,DDIT4,SAMSN1,TUBA1A,DNAJA1,ZNF331,H3F3B,SOCS3,UBC,SRSF7,LDHA,CYCS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Treg Clusters _Cluster1_PMID_31924475,T cell,STMN1,HIST1H4C,HMGB2,TUBA1B,S100A8,KIAA0101,UBE2C,MKI67,BIRC5,TOP2A,TK1,HMGN2,H2AFZ,FABP5,CENPF,CKS1B,CKS2,NUSAP1,TYMS,RRM2,S100A9,PCNA,DUT,HSPB1,PTTG1,HMGB1,ZWINT,CCNB2,CDK1,MAD2L1,CENPW,KPNA2,GSTP1,ASF1B,ARL6IP1,MCM7,SMC4,AURKB,CDKN3,TUBA1C,CENPA,TPX2,CCNB1,UBE2S,UBE2T,CDC20,CCNA2,H2AFV,DTYMK,FEN1,ASPM,TMPO,NUDT1,DEK,SMC2,CENPM,H2AFX,NUCKS1,CEP55,GTSE1,ANP32E,VIM,LSM5,SLC25A5,DDX39A,KIF22,LGALS1,ANP32B,CENPE,CDT1,TROAP,DNAJC9,HN1,RAN,GGH,CDCA5,TXN,PHF19,TMEM106C,RNASEH2A,LSM4,S100A11,HMGB3,SNRPD1,CDCA3,MXD3,DLGAP5,MZT2B,CARHSP1,COX8A,SGOL1,RANBP1,PPIA,H2AFY,TCF19,TALDO1,HELLS,TPI1,ARHGAP11B,NDC80,CENPN,SIVA1,SHFM1,CENPU,KIF20B,CDCA4,ATAD2,PRC1,PDCD5,SKA2,CLSPN,GMNN,CDCA8,C12orf75,CKAP2L,HNRNPA2B1,ANAPC11,FANCI,RPA3,SAE1,STRA13,SNRPG,SNRNP25,NUF2,HMGA1,CALM2,PTMA,SNRPB,NASP,RAD21,TFDP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Treg Clusters _Cluster2_PMID_31924475,T cell,IFIT3,ISG15,IFITM1,IFIT1,MX1,IFI44L,MX2,NT5C3A,GIMAP7,IFIT2,RSAD2,ANXA1,GIMAP4,ISG20,TNFSF10,OASL,OAS1,CMPK2,USP18,CCR7,IFI6,PLSCR1,IFI44,CD69,IRF7,SAMD9L,EPSTI1,SAMD9,OAS3,IGKC,EIF2AK2,KLF2,HELZ2,STAT1,C19orf66,TMEM123,ZFP36L2,ALOX5AP,GBP1,ZBP1,MT2A,HERC5,XAF1,KLRB1,RARRES3,IFI35,LY6E,TRIM22,IFI16,UBE2L6,SMCHD1,GIMAP1,PPM1K,IGHG3,PARP9,OAS2,LGALS9,JUN,GPR155,NMI,DRAP1,GIMAP2,CXCR4,LAP3,CHST12,CLEC2D,SP100,PPP2R5C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Treg Clusters _Cluster3_PMID_31924475,T cell,TNFRSF4,TNFRSF9,REL,PIM3,TNFRSF18,NFKBIA,DUSP2,SLC7A5,NINJ1,ID2,PTP4A3,HSP90AB1,PKM,ZBTB32,BCL2L1,GADD45B,SDC4,SMS,MAP2K3,SERPINB9,CTLA4,SH2D2A,LMNA,NFKB2,TRAF1,TFRC,ICOS,CD82,C10orf54,HSPA5,LINC01588,RILPL2,GADD45A,BATF,RELB,NME1,SLC3A2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Treg Clusters _Cluster4_PMID_31924475,T cell,LGALS1,IFI6,CXCL8,LAG3,LAIR2,CST7,GNLY,CCL4,TYMP,CTSC,ACP5,GZMB,LY6E,COX5A,CCL5,BST2,CSF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Treg Clusters _Cluster5_PMID_31924475,T cell,IGLC3,HSPA1B,HSPA1A,IGHA1,IGLC2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,CD4+ Treg Clusters _Cluster6_PMID_31924475,T cell,PMAIP1,JUNB,TSC22D3,MAGEH1,RGS1,ZFP36,CXCR4,DUSP1,FOS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster1_PMID_31924475,B cell,MARCKSL1,RGS13,SERPINA9,GMDS,LRMP,LMO2,HMCES,CCDC144A,HMGN1,HOPX,BIK,CAMK1,BASP1,DHRS9,ACTG1,LCP1,PARP1,RFTN1,ARPC2,ANP32B,NANS,LPP,HMGA1,MS4A1,METAP2,PKM,CD53,NEIL1,SERF2,FERMT3,KLHL6,SMIM14,ARPC5,ACTR3,SIAH2,CD40,VNN2,SEMA4A,PFN1,CD22,RP11-231C14.7,AC023590.1,LCK,ACY3,GRHPR,UCP2,GCHFR,CORO1A,PDIA4,ARPC1B,VPREB3,ALDH2,PRDX1,PRPSAP2,SLC25A5,DEF8,TMEM123,MTMR14,ABRACL,SWAP70,PLEK,H3F3A,AC074289.1,ERP44,SNAP23,CFL1,CTSH,GGA2,GPR160,SELT,STAG3,BCL2A1,BCAS4,BCL7A,PLCG2,ALOX5AP,ATP5L,VASP,RPRD1B,RRAS2,UBE2J1,TERF2IP,FAM3C,BPNT1,PAG1,FCRLA,RFC1,SYPL1,DNAJC10,OGG1,ADA,ODC1,RASGRP3,DAAM1,HLA-DMB,ARPC4,RGS10,LYPLAL1,LIMD2,AC079767.4,HERPUD1,PHF6,TCEA1,S1PR2,LINC00877,SYNE2,ZNF581,CCDC88A,LBR,LAT2,HLA-DQA1,SLC25A3,LYPLA1,HTR3A,COX5A,SH3KBP1,YWHAB,HCLS1,CD81,PRMT1,PRDX6,PIP4K2A,ATP5G3,HSPA5,PDIA3,SIT1,POU2AF1,RGS16,PTPRC,WDR1,RAN,MTF2,SNX5,SCIMP,DUSP2,TOX,TPM4,MYL6,ZFAND6,SEL1L3,LYSMD2,POU2F2,TRAF4,DYNLL1,CAPZA1,RBBP4,CAP1,GPR18,HDAC1,LIMS1,PDIA6,LPXN,CD79A,CSTB,VEZT,CAPZB,RANBP2,SPATS2,CD38,HLA-DMA,IRF8,ARPC5L,HLA-DRB5,MDH1,MYO1E,FGD6,BRWD1,NR3C1,CCT8,OTULIN,PRKCD,ENO1,CD74,CCNI,CSK,P2RX5,CYB561A3,DBI,DBNL,SORL1,SKAP2,AL928768.3,GDI2,QPCT,GLRX3,ARPC3,WIPF1,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster2_PMID_31924475,B cell,SUGCT,RGS13,NEIL1,EZR,ATP5L,ACTG1,MARCKSL1,HMCES,WDR66,SUSD3,HMGN1,ISG20,SERF2,TCL1A,SERPINA9,METAP2,SYNE2,BCL7A,CCDC144A,CD27,CD79B,SMIM14,DYNLL1,TCEA1,LRMP,RP11-231C14.7,BCAS4,LPP,UBE2J1,UCP2,SLC25A5,DAAM1,POU2AF1,CD38,LIMD2,ANP32B,C4orf3,SRSF9,AICDA,GCHFR,PARP1,BASP1,LSM10,RFTN1,SEMA4A,AC023590.1,HMGA1,CD81,LTB,GCSAM,SEC14L1,HMGN2,TPD52,NANS,VNN2,STAG3,GGA2,OAZ1,CFL1,TKT,DEF8,IRF8,VPREB3,ARPC2,DBI,SEL1L3,H2AFV,ALOX5AP,GRHPR,GSTP1,S1PR2,CCDC69,SMARCB1,ACTR3,ZNF581,LAMTOR5,H3F3A,BLOC1S6,ACY3,P2RX5,S100A10,DCAF12,YWHAB,YWHAE,AL928768.3,LCP1,LYPLAL1,TMEM123,CD22,BRK1,TBCA,PRDX1,CORO1A,BIK,LBR,MBD4,RRAS2,SNAP23,ASB13,IL4R,SH3KBP1,LAPTM5,HMGB1,DSTN,PTP4A2,LYPLA1,OGG1,CDCA7,NCF1,ATP5J2,COX6A1,SIAH2,AC079767.4,PPP2CA,SELT,ADA,CAPZA1,ATP5G3,SMIM20,PTTG1,HNRNPA1,RBM6,ARPC3,AC074289.1,FCRLA,CD40,SYPL1,RASGRP3,PPP1CC,ATP5C1,HNRNPC,SOCS1,HSBP1,PGLS,SLBP,ARPC5,SRSF3,KLHL6,PRDX3,CD53,BRWD1,MYL6,CCDC88A,PTPN18,PRPSAP2,RBBP4,ITGAE,BACH2,SHFM1,RNGTT,RFC1,C12orf75,SLC25A3,IMP4,UBE2G1,FNBP1,ATP5F1,LSM14A,STMN1,ACADM,RHOA,ROMO1,ARHGDIB,HERPUD1,SPATS2,SRP9,MAP1LC3B,RBX1,USP34,HDAC7,SIT1,FKBP1A,RBBP7,PFN1,SPI1,ARPC1B,RAN,CCT8,CSTB,LCK,COX5A,LDHB,RHOH,PSIP1,ATPIF1,PPP2R5C,ERH,DNMT1,HNRNPM,ATP5A1,PTPRC,SNTA1,TCEB2,PKM,CLTA,UBE2L3,HDAC1,RAC1,TRAPPC1,MSI2
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster3_PMID_31924475,B cell,HMGB2,HIST1H4C,STMN1,TUBA1B,UBE2C,PTTG1,H2AFZ,TOP2A,CDC20,CENPF,CKS2,HMGN2,CCNB2,KPNA2,NUSAP1,HMGB1,H2AFV,BIRC5,CCNB1,AURKB,ARL6IP1,SMC4,CKS1B,CDKN3,MKI67,HN1,CDK1,PLK1,HMMR,UBE2S,RGS13,KIAA0101,TPX2,TACC3,CALM2,CENPE,ANP32B,NUCKS1,CDCA3,HMGN1,HMCES,AURKA,TUBA1C,NUF2,CENPA,CALM3,H2AFX,RAD21,LRMP,RAN,CCNA2,SLC25A5,MAD2L1,DEK,HMGB3,GTSE1,CDCA8,DDX39A,AICDA,ASPM,PRC1,ANP32E,DBI,BUB3,HNRNPA2B1,KIF22,CBX3,LBR,METAP2,HMGA1,RP11-620J15.3,DCK,DSTN,H3F3A,LMNB1,DLGAP5,TMPO,H2AFY,PSIP1,UBE2J1,CFL1,ZWINT,CENPW,ACTG1,MXD3,GCSAM,ARPC2,KIFC1,PLIN3,BIK,PKM,C12orf75,CENPM,SGOL2,YWHAH,PIF1,DAAM1,CD81,CKAP2,HNRNPA3,DYNLL1,PARP1,PPIA,SKA2,LSM5,COX8A,LDHA,SYNE2,EZR,SRSF3,PRDX3,TYMS,PBK,NANS,CDC25B,KIF20B,COX17,DUT,SMC2,RACGAP1,ITGAE,PSMA4,ARPC5,ACTR3,BUB1,SPC25,TCL1A,ATP5B,KIF2C,SERF2,PTMA,MZT2B,GSTP1,DNMT1,TCEA1,CDCA7,LPP,MND1,PTP4A2,KHDRBS1,PFN1,NDC80,SGOL1,SFPQ,ATP5G3,RBBP7,ANAPC11,SMARCA4,YWHAE,ATPIF1,SSBP2,IMP4,NEIL1,SNRPD1,DCTN3,EAF2,COX6A1,TROAP,MPC2,CDK2AP2,SHCBP1,CARHSP1,SUSD3,ERH,TK1,TPM4,CORO1A,RRM2,UBB,TPI1,DTYMK,ARHGAP11B,ATP5L,RBMX,KNSTRN,KIF23,ILF2,PRDX1,SNRPG,SRP9,PRDX6,CD38,LCP1,HNRNPM,GCHFR,PPP1CA,S100A10,TOP1,GGA2,HP1BP3,HMGN3,RANBP1,RAC1,MZT1,COX5A,MYBL2,POMP,UGP2,HJURP,UBE2T
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster4_PMID_31924475,B cell,HIST1H4C,STMN1,H2AFZ,TUBA1B,KIAA0101,HMGB2,DUT,PCNA,TK1,HMGN2,HMGB1,RRM2,MCM7,TYMS,SLBP,DEK,H2AFV,HMGA1,HMGN1,DNMT1,RANBP1,SLC25A5,PKM,ANP32B,MCM3,GINS2,DHFR,CARHSP1,RGS13,H2AFY,PTTG1,RAN,CENPM,CDT1,ZWINT,NUSAP1,ASF1B,FEN1,RPA3,GSTP1,SMC4,LDHA,SNRPG,CDCA7,TPI1,MCM5,HMCES,SNRPD1,MKI67,PPIA,CBX3,SRSF3,HELLS,MYBL2,PTMA,DBI,GCHFR,AURKB,RMI2,LRMP,RRM1,CFL1,C12orf75,NASP,H3F3A,DNAJC9,TFDP1,COX8A,H2AFX,FABP5,PFN1,CDK1,SRSF2,METAP2,HNRNPAB,CENPU,LMNB1,HNRNPF,LDHB,PSIP1,HNRNPA3,SIVA1,ENO1,CLSPN,UHRF1,CKS2,COX5A,BIRC5,PARP1,TOP2A,SNRPB,CCDC167,ATP5G3,DDX39A,ERH,PRDX1,HNRNPA2B1,SERF2,RBBP7,PGAM1,MARCKSL1,PRDX3,NUCKS1,CKS1B,SMC2,YWHAH,UBE2C,RBBP4,SRSF9,ACTG1,ATP5L,GMNN,C19orf48,EZR,TCEA1,EZH2,WDR76,CALM3,SNRNP25,NANS,YWHAE,MCM4,RFC1,ATP5J2,PRDX6,LSM4,ARPC2,UBE2J1,PPM1G,USP1,ATP5J,PSMA7,CCND3,COX6A1,YBX1,CBX5,RBX1,HSPB11,CHCHD2,UBE2T,IDH2,TMEM106C,LSM3,BIK,MCM6,SYNE2,ANP32E,NAA38,CENPH,TMPO,SLC25A3,HNRNPM,MYL6,PPP1CA,KIF22,HNRNPD,MAD2L1,SUGCT,SAE1,TACC3,ARPC5,CENPW,GCSAM,ANAPC11,ALDOA,MPC2,SUMO2,CDCA4,YWHAQ,RFC2,SHFM1,NUDT1,LBR,SNRPE,HSPD1,NPM1,HNRNPA1,EIF4A3,PHGDH,CHAF1A,SMS,SNRPF,CDKN3,SHCBP1,ATAD2,SPC25,MCM2,LIG1,SRSF10,S100A10,NUDT21,PA2G4,TCL1A,CORO1A,RNASEH2A,ATPIF1,SSRP1,COX17,MND1,SMC3
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster5_PMID_31924475,B cell,IGHG1,IGHG2,IGHG3,IGHG4,IGHA1,IGKC,IGHA2,IGHGP,IGLC3,IGLC2,JCHAIN,MZB1,IGHM,XBP1,SSR4,FKBP11,DERL3,HSP90B1,SEC11C,PRDX4,FKBP2,SDF2L1,IGLC7,ITM2C,MYDGF,HERPUD1,VIMP,SSR3,HSPA5,IGLV6-57,MANF,IGLV3-1,PPIB,PDIA4,LGALS1,IFI6,SPCS3,SEC61B,SUB1,PIM2,SELK,NEAT1,CITED2,GNLY,CCL5,GZMB,LMAN1,TNFRSF17,CD63,GZMA,LINC00152,JSRP1,SRGN,HM13,SEC61G,SPCS2,CRELD2,KDELR2,NUCB2,ERLEC1,RABAC1,RPN2,ANKRD28,P4HB,PDIA6,DNAJB9,CD3D,RRBP1,HIST1H1C,PRDM1,SPCS1,TXNDC11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster6_PMID_31924475,B cell,IGHD,S100A8,LINC00926,YBX3,S100A9,PLPP5,NBEAL1,FAM26F,RP11-255M2.3,IL4R,RP11-166O4.6,ZNF90,TXNIP,TCL1A,TIPIN,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster7_PMID_31924475,B cell,ISG15,IFIT3,IFI6,IFITM1,IFI44L,MX1,LY6E,IRF7,IFIT1,MT2A,TYMP,EPSTI1,STAT1,OAS1,IFIT2,ISG20,IFITM2,PLSCR1,MX2,TNFSF10,BST2,SAMD9L,UBE2L6,EIF2AK2,NT5C3A,RNF213,CMPK2,XAF1,PSMB9,IFI35,TAP1,USP18,TRIM22,GBP1,IFI44,OAS3,S100A11,DRAP1,PPM1K,C19orf66,PARP9,PARP14,PLAC8,SAMD9,SAT1,PSME2,CHST12,IFI16,OAS2,HLA-A,SUB1,ADAR,RABGAP1L,CD164,LAP3,NMI,HSH2D,SRGN,CAPG,TNFRSF13B,MYL12A,HLA-B,VIM,CHMP5,SELL,HLA-C,IRF9,IRF1,CCR7,HLA-E,LGALS1,SP110,TMEM123,RBCK1,SAMSN1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster8_PMID_31924475,B cell,KLF6,DUSP2,RGS1,JUN,CH17-373J23.1,IER2,CD69,FOSB,NFKBIA,PPP1R15A,EGR1,ZFP36,KLF2,FOS,DUSP1,GPR183,TSC22D3,NR4A2,JUNB,TNFRSF13B,RP11-386I14.4,YPEL5,MCL1,ITGB1,AL928768.3,IDS,TUBA1A,JUND,UBC,RGS2,BCL2A1,CD44,CLECL1,NEAT1,RP1-313I6.12,IER5,ADGRE5,CXCR4,CAPG,CRIP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster9_PMID_31924475,B cell,FCER2,IGHD,CD72,PHACTR1,FOS,CHI3L2,CD69,TCL1A,HVCN1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster10_PMID_31924475,B cell,HSPA1A,HSPA1B,DNAJB1,HSP90AA1,HSPB1,HSPH1,HSPE1,IER5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,B cell Clusters _Cluster11_PMID_31924475,B cell,RP5-887A10.1,AL928768.3,TNFRSF13B,CRIP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,Myeloid cell Clusters_Cluster1_PMID_31924475,Dendritic cell,FSCN1,CCL19,TXN,CCL22,BIRC3,CCR7,CCL17,MARCKSL1,LAMP3,IDO1,CST7,GSN,RGS1,CD83,PPA1,CSF2RA,EBI3,AOC1,ID2,DUSP5,NUB1,HLA-DQA1,BASP1,ANXA6,RAMP1,LAD1,IL4I1,SYNGR2,IL32,HSPB1,LSP1,CD74,DUSP4,TMEM176A,TBC1D4,RAB9A,SAMSN1,PLA2G16,HSPA1A,CD40,HLA-DPB1,IL7R,IGKC,CDKN1A,GRSF1,GADD45A,GPR183,RASSF4,GPR157,NABP1,TSPAN13,REL,MTHFD2,DAPP1,PPP1R14A,HLA-DQB1,CFLAR,HLA-DPA1,TUBA1C,HLA-DQA2,MAP3K13,TRAF1,MALAT1,VOPP1,IGHG3,FAM60A,CD86,MIR155HG,HSPA1B,IGHG1,KDM2B,KIF2A,RELB,GZMB,GPX4,HLA-DRA,SIAH2,STK4,BTG1,GRAMD1A,PTMS,FNBP1,CRIP1,MARCKS,CD274,ALDH2,CLIC2,NMRK1,MGLL,TVP23A,NRP2,YWHAQ,TMEM176B,NFKB1,PMAIP1,HSP90AA1,TRAFD1,ERICH1,SEC61B,RFTN1,HLA-DRB1,ACTG1,LY75,UBB,HLA-DRB5,NET1,PVRL2,ETV3,REPIN1,SPINT2,IL2RG,HSPA8,HLA-DQB2,MALT1,TUBA1B,H2AFZ,GPR137B,ATF5,POGLUT1,TNFAIP2,UBC,CYTIP,JUN,PTGIR,VMO1,CXCL9,CD200,ISG20,PTPN1,TRIP10,OSTF1,GBP1,GADD45B,BCL2L14,CD70,SERPINB9,RAB8B,TRADD,IRF4,MYL6,SOCS2,TSTD1,DNAJB1,HLA-A,NAA25,FAM118A,BZW1,TMSB10,ATOX1,GSTP1,RHOF,CLPTM1,GPBP1,CD80,EPSTI1,HMGN3,TSPAN33,CTSH,NR4A3,TAP1,TNFAIP8,GABARAPL2,ISCU,ADAM19,MCM5,HSP90AB1,PTGES2,SERPINF1,HLA-DOB,ST3GAL5,SOCS1,HAPLN3,C15orf48,PPM1K,ANXA7,PNRC1,PEA15,CYB5A,RALA,SUB1,NFKB2,FYTTD1,MYO1G,KLF6,NECAP2,ENO1,ASMTL,MAP3K14,HINT1,ARHGAP10,CERS6,FLT3,GNG5,HLA-C,FABP5,PLGRKT,MREG,YPEL5,TNFRSF9,ZBTB10
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,Myeloid cell Clusters_Cluster2_PMID_31924475,Monocyte,FCGR3A,LYPD2,RHOC,IFITM2,NAP1L1,CDKN1C,LST1,MS4A7,LINC01272,HES4,IFITM3,CFD,CD79B,COTL1,AIF1,TCF7L2,SPN,LRRC25,CD52,BIN2,DRAP1,LY6E,ABI3,CKB,RNASET2,SOD1,BID,PILRA,CSF1R,EVL,PECAM1,SIGLEC10,LILRA1,MTSS1,LILRB2,KLF2,OAS1,SERPINA1,MAPKAPK3,FAM110A,RAP1B,LIMD2,NAAA,ADA,UNC119,YBX1,TESC,CD68,SLC2A6,TPPP3,43717,SYTL1,CUX1,SPI1,PTPN6,RGS19,LYN,CORO1A,POU2F2,HCK,PTP4A3,VASP,FAM26F,ZNF703,WARS,MYO1G,NACA2,ARHGDIB,C10orf54,IFITM1,STXBP2,ICAM2,PTGES3,CYTIP,NACA,FCER1G,HLA-C,HMOX1,RP5-1171I10.5,TXNIP,CAMK1,CD37,CCDC12,ARPC2,IFI30,KLF3,CAPZB,TNFRSF1B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,Myeloid cell Clusters_Cluster3_PMID_31924475,Monocyte,LGALS2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,Myeloid cell Clusters_Cluster4_PMID_31924475,Neutrophil,S100A8,S100A12,S100A9,VCAN,CYP1B1,RBP7,SELL,PLBD1,MNDA,RP11-1143G9.4,VNN2,HMGB2,GCA,METTL9,CSTA,NCF1,LYZ,IRS2,MEGF9,FOS,CD36,CSF3R,RETN,EGR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,Myeloid cell Clusters_Cluster5_PMID_31924475,Monocyte,ISG15,HSPA1A,TIMP1,C15orf48,HSPB1,DNAJB1,APOBEC3A,IL1RN,IL1B,HSP90AA1,GADD45B,ISG20,IER3,CCL4,NFKBIA,BCL2A1,G0S2,CCL3,PLAUR,IGKC,SERPINB9,CCL4L2,CD69,SLC2A3,CCL3L3,OLR1,EREG,IGLC2,VEGFA,PPIF,TNFAIP3,SOD2,GLUL,GPR183,THBD,DUSP2,TREM1,LDHA,IFI6,MIR4435-2HG,CTSL,HBEGF,CXCL8,DDIT4,MX1,TNFSF10,GBP1,PTGS2,SRGN,FPR3,IGHA1,JUN,PPP1R15A,BHLHE40,PLIN2,RGCC,LCP2,IFITM3,SOCS3,LITAF,SAT1,CREM,RGS1,ALOX5AP,HSPE1,CD14,OSM,FTH1,UBB,SGK1,ICAM1,GK,LINC00152,NAMPT,CD63,TPM4,RP11-670E13.6,IRF7,MT2A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,Myeloid cell Clusters_Cluster6_PMID_31924475,Dendritic cell,HLA-DQA1,HLA-DQB1,HLA-DPB1,HLA-DPA1,FCER1A,CD74,HLA-DRB5,HLA-DRB1,S100B,CLEC10A,HLA-DRA,HLA-DQA2,GSN,CD1C,RGS1,LMNA,LTB,AREG,PPA1,GPR183,HLA-DQB2,HLA-DMA,TUBA1B,HLA-DMB,PKIB,AXL,CST3,YWHAH,SERPINF1,NDRG2,CPVL,CST7,SPINT2,CD1E,HSPA8,ALDH2,ARL4C,PPP1R14A,IL4I1,IRF8,C15orf48,HMGN1,SYNGR2,CTSH,TAP1,PLD4,PTMS,CALR,ACTG1,C1orf54,HSP90AB1,PPIB,GADD45B,PSME2,PEA15,CSF2RA,CD69,PDIA3,RUNX3,IDH2,PEBP1,LDHA,RGS10,C12orf75,KCNK6,LSP1,FCGR2B,CXCR4,CKLF,IL2RG,43714,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,Myeloid cell Clusters_Cluster7_PMID_31924475,Monocyte,CCL20,CXCL3,CCL3,CXCL2,CCL3L3,IL1B,CCL4L2,CXCL8,CCL4,IL1RN,CXCL1,IL6,PTGS2,TIMP1,G0S2,PLAUR,SOD2,C15orf48,EREG,INHBA,BCL2A1,TNFAIP6,SPP1,CTSL,IER3,AREG,TNIP3,MT2A,F3,IL1A,FTH1,OLR1,SERPINB9,NFKBIA,GK,PLIN2,CD44,TNFAIP3,EHD1,EMP1,SLC2A3,AQP9,TREM1,INSIG1,SRGN,LINC00152,PPIF,NAMPT,VEGFA,MIR4435-2HG,BTG1,NINJ1,MIR3945HG,ICAM1,IVNS1ABP,NLRP3,PNRC1,WTAP,SLC25A37,GADD45B,CSTB,CREM,SDC2,ATP13A3,SAMSN1,SAT1,PPP1R15A,DUSP4,MMP19,PHLDA1,ETS2,ISG15,PMAIP1,TNIP1,NFKB1,LDHA,PFKFB3,ANPEP,HBEGF,FLT1,SLC39A8,ADAM19,THBD,CD63,TNFAIP8,RP11-670E13.6,DUSP2,ANXA5,IL7R,UPP1,ELL2,TPM4,HIF1A,LITAF,THBS1,RGCC,RIN2,FNDC3B,GPR84,CD83,CLEC5A,GSTO1,ALOX5AP,BASP1,RNF19B,SLC7A5,ADM,PLEK,OSM,AC069363.1,ISG20,CFLAR,LIMS1,HSPA1A,MMP14,LCP2,ATP2B1,MCEMP1,SELK,ACSL1,KYNU,C1orf122,PDE4B,PNP,ATP1B3,SLC16A10,PDE4DIP,DSE,LINC00936,CD300E,SOCS3,MXD1,MARCKS,PHLDA2,TRAF1,EIF1B,RAB13,CCRL2,H3F3B,DRAM1,IGKC,FCER1G,SPHK1,FCGR2A,GNA15,IGHA1,HPSE,SNX9,DDIT4,BEST1,ITGAX,PMP22,CDKN1A,CD55,APOBEC3A,FNIP2,ABCA1,POMP,IGLC2,PIM3,NDRG1,HSPA5,BNIP3L,BZW1,KDM6B,RHOH,CYSTM1,TPI1,BHLHE40,XBP1,MARCO,CEBPB,CD59,SLC16A3,MAP3K8,FPR2,HSPB1,GPR183,ARFGAP3,TNFRSF1B,BCAT1,GLUL,TFRC,MIF,VIM,PELI1,NFKBIZ,PGK1,RIPK2,,,,,,,,,,,
Immune Landscape of Viral- and Carcinogen-Driven Head and Neck Cancer,31924475,Myeloid cell Clusters_Cluster8_PMID_31924475,Macrophage,APOE,APOC1,C1QB,RNASE1,C1QA,MMP12,C1QC,CCL18,SPP1,IFI27,ACP5,MMP9,LGMN,GPNMB,CXCL9,CTSL,CTSB,CTSC,NUPR1,RGS1,HLA-DQA1,PLD3,MMP14,CD9,CTSD,HLA-DRB1,SLC40A1,TREM2,CD63,FPR3,CD81,TMEM176B,SERPING1,PRDX1,GLUL,HLA-DRA,CAPG,CTSZ,CD74,PLTP,FCGR2A,PLA2G7,IL7R,CXCL10,TMEM176A,CD59,MS4A4A,SLCO2B1,GSN,HLA-DPA1,PMP22,ARL4C,LGALS3BP,MRC1,CCL4,TFRC,MSR1,CD14,LILRB4,IL4I1,LIPA,FABP5,C2,HLA-DQB1,PLAU,CSTB,CXCL1,CALR,A2M,IFI6,ATOX1,ADAMDEC1,C1orf54,SDS,CD68,DAB2,LMNA,HLA-DPB1,HLA-DMB,VMO1,GPR183,VSIG4,CXCL16,ABCA1,PTMS,HLA-DMA,FCGR2B,CREG1,HLA-A,GRN,HSPB1,SGK1,GM2A,DNASE2,STAB1,PSAP,LGALS3,MT1X,FCGR3A,JUN,YWHAH,TGFBI,CREM,MS4A7,C15orf48,HEXA,FCER1G,MARCKS,IGKC,SDC3,HEXB,CSF1R,LAMP1,AXL,ARHGAP18,CTSA,C3AR1,HLA-DRB5,PLAUR,LAIR1,HSP90B1,ACP2,CD163,IL32,CXCL3,CTSH,STAT1,BCAP31,ATP6V1F,ITM2B,LITAF,TTYH3,FTL,GPX3,ID3,IER3,SPRED1,NPC2,RAB13,LAG3,CCL4L2,FBP1,MAF,NR1H3,SLC16A3,RALA,FUCA1,SLAMF8,ICAM1,AKR1B1,LAPTM4A,HSPA1A,MGST3,HMOX1,ATP6AP1,SYNGR2,LHFPL2,CCL3,BST2,ANXA2,NRP1,ABHD12,GADD45G,SCARB2,ENG,FCGRT,ISG15,SGPL1,CALM1,SDC2,TSPAN4,ARL6IP1,LAPTM5,S100A11,HSP90AB1,ZNF331,SOD2,MFSD1,ALOX5AP,ATF5,CXCL2,AKR1A1,TSC22D1,PPIB,GBP1,TCN2,SERPINF1,ENPP2,PDIA4,SLC16A10,LAMP2,MT2A,OLR1,IDH1,UBB,SCD,HLA-DQA2,LINC00998,KCNMA1,PVRL2
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Myeloid0/Macrophage_PMID_32686767,Macrophage,APOE,APOC1,RNASE1,CTSL,C1QA,C1QB,C1QC,CTSD,ADAMDEC1,SPP1,FTL,NUPR1,GPNMB,FCGR3A,CCL8,PLD3,LGMN,GLUL,CTSC,CD163,PSAP,CTSB,CCL3,HES1,MMP9,MS4A4A,IFIT1,ACP5,PLA2G7,CD68,MAFB,CD14,IFI6,TREM2,MS4A7,PRDX1,ASAH1,LGALS3,CCL4,IFI27,MARCKS,CREG1,CD81,SLC40A1,CTSS,FCER1G,CXCL9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Myeloid1/DC2(CD1C+)_PMID_32686767,Dendritic cell,S100B,HLA-DQB2,FCER1A,CD1A,PKIB,NDRG2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Myeloid2/pDC_PMID_32686767,Dendritic cell,PTGDS,GZMB,IGJ,TCL1A,LILRA4,PLAC8,ITM2C,IRF7,PPP1R14B,TCF4,TSPAN13,CLIC3,SELL,PLD4,UGCG,CCDC50,C12orf75,BCL11A,MZB1,PTCRA,SPIB,LRRC26,SMPD3,MAP1A,ALOX5AP,SCT,PTPRS,IL3RA,APP,CYB561A3,SEC61B,SPCS1,CLEC4C,SLC15A4,HIGD1A,NUCB2,MPEG1,LTB,GAPT,IDH3A,LAMP5,C10orf118,TRAF4,OFD1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Myeloid3/Monocyte_PMID_32686767,Monocyte,S100A8,TIMP1,S100A9,IL1B,FCN1,VCAN,IL8,S100A12,APOBEC3B,G0S2,CCL2,S100A4,CCL20,APOBEC3A,SOD2,IL1RN,FPR1,C15orf48,EREG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Myeloid4/DC3(CCR7+)_PMID_32686767,Dendritic cell,BIRC3,CCL19,FSCN1,CCR7,CCL22,MARCKSL1,TXN,CCL17,LAMP3,CRIP1,NUB1,IDO1,KIF2A,SAMSN1,ID2,CD83,CST7,RAB9A,LSP1,TBC1D4,EBI3,ANXA6,BTG1,GRSF1,CSF2RA,LAD1,PNRC1,GPR157,BASP1,PLA2G16,DUSP4,DAPP1,RAMP1,AOC1,NCCRP1,PPA1,MAP3K13,STK4,UBD,IL32,LY75,FAM60A,ERICH1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Myeloid5/DC1(CLEC9A+)_PMID_32686767,Dendritic cell,RGCC,CPVL,CLEC9A,CPNE3,C1orf54,DNASE1L3,SNX3,CCND1,IRF8,LGALS2,CLNK,CST3,NAAA,SERPINB1,PPT1,XCR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Tcell1/CD8+T-1_PMID_32686767,T cell,GZMH,GZMA,CCL5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Tcell5/DysfunctionalCD8+T_PMID_32686767,T cell,CCL4,CCL3,GZMB,NKG7,GZMK,IFNG,HIST1H4C,LAG3,HAVCR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Tcell6/CD4+Tregs-2_PMID_32686767,T cell,TNFRSF4,TNFRSF18,TNFRSF9,IL2RA,PKM,HSP90AB1,BATF,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Tcell7/CD4+Tconv-3_PMID_32686767,T cell,CXCL13,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Tcell8/CD8+T-3_PMID_32686767,T cell,IFIT3,ISG15,IFIT1,IFIT2,RSAD2,MX1,MT2A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Tcell9/NKcell_PMID_32686767,T cell,GNLY,TYROBP,KLRC1,FCER1G,XCL1,XCL2,KLRD1,CTSW,IFITM3,HOPX,KLRF1,KLRC2,PRF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Bcell2/Plasmacell_PMID_32686767,B cell,IGJ,XBP1,MZB1,SSR4,DERL3,FKBP11,HSP90B1,ITM2C,SEC11C,PRDX4,FKBP2,HERPUD1,JUN,SSR3,VIMP,SDF2L1,SELK,SPCS2,MANF,C19orf10,SPCS3,HSPA5,IFI6,PPIB,RRBP1,SEC61B,DNAJB9,PIM2,SPCS1,CD63,PDIA4,ERLEC1,NUCB2,TNFRSF17,SEC61G,LMAN1,JSRP1,TMEM258,TMEM59,RPN2,RABAC1,SDC1,LGALS1,KDELR2,CRELD2,IFI27,SUB1,PSAP,GSTP1,CD38,NPC2,TMED10,ARF4,NEAT1,KRTCAP2,TMED9,SELM,PDIA6,SLAMF7,HM13,P4HB,SRGN,TMED2,TXNDC15,CD27,KDELR1,TRAM1,HLA-C,CD59,TMBIM6,TIMP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Bcell3/FCRL4+memoryBcell_PMID_32686767,B cell,FCRL4,ISG15,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Bcell4/Bcell-3_PMID_32686767,B cell,FABP5,HSP90AB1,ENO1,LDHA,NME1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Bcell5/GerminalcenterBcell_PMID_32686767,B cell,MARCKSL1,RGS13,HMGN1,TCL1A,NEIL1,HMCES,ACTG1,LRMP,LPP,SYNE2,SERPINA9,DAAM1,BCL7A,HMGN2,SERF2,SUGCT,PTTG1,SNX29P2,EZR,RFTN1,HMGA1,UCP2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell transcriptomics reveals regulators underlying immune cell diversity and immune subtypes associated with prognosis in nasopharyngeal carcinoma,32686767,Bcell6/Bcell-4_PMID_32686767,B cell,IGLL5,HIST1H4C,HMGB2,STMN1,MKI67,KIAA0101,TUBA1B,H2AFZ,TOP2A,TK1,DUT,UBE2C,CENPF,NUSAP1,TYMS,RRM2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma,34663877,T_conv1_PMID_34663877,T cell,IL7R,ANXA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma,34663877,T_conv2_PMID_34663877,T cell,SCGB3A1,SCGB3A2,NAPSA,XCL2,XIST,ANKRD28,C4BPA,SLPI,SFTA2,ANXA1,SCGB1A1,MUC1,PIGR,CST3,IL7R,S100A11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma,34663877,T_reg_PMID_34663877,T cell,LTB,TNFRSF4,TNFRSF18,CTLA4,SPOCK2,MAF,ARID5B,TIGIT,TRAC,ICOS,CD4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma,34663877,T_CD8_1_PMID_34663877,T cell,HSPA1A,HSPA6,HSPA1B,DNAJB1,HSPH1,HSPD1,CCL5,IFNG,GZMA,HSPE1,GZMB,CLEC2B,CCL3,DUSP4,RGS1,ATF3,CACYBP,ZFAND2A,RGS2,GZMK,CCL4,BAG3,FABP5,CHORDC1,CD8A,DNAJB4,HSPB1,APOBEC3G,DNAJA4,NKG7,SAA1,PTMS,CRTAM,HLA-DRB1,CSF1,LAG3,TNFSF9,CYTOR,TNFRSF9,RHOB,TIGIT,FKBP4,DEDD2,SPP1,BICDL1,CD8B,PTPN22,GBP2,LYST,GZMH,AHSA1,RAB27A,LINC01871,HLA-DPB1,CD7,COTL1,ITM2A,NR4A1,HLA-DPA1,CTSW,CST7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma,34663877,T_CD8_2_PMID_34663877,T cell,CCL5,GZMB,KLRC2,ALOX5AP,LDLRAD4,RARRES3,VCAM1,ZBTB1,CRTAM,PSME2,CD7,ENTPD1,CD3D,PTPN22,CD8A,FAM118A,LAG3,PTMS,AKAP5,CLEC2D,EVL,GZMA,PDE3B,CTSW,COTL1,RGCC,TRAC,PSMB9,METRNL,ZEB2,ZNF331,DUSP4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma,34663877,T_CD8_3_PMID_34663877,T cell,GNLY,NKG7,GZMH,CMC1,KLRD1,TRGC2,CCL4,CST7,KLRG1,FGFBP2,LYAR,PRF1,PLAC8,KLRF1,FCGR3A,ADGRG1,PLEK,SAMD3,CCL5,LITAF,CTSW,GZMM,CD3G,ZEB2,C1orf56,CDC42SE1,C12orf75,ABHD17A,KLF2,AKNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma,34663877,T_CD8_Proliferating_PMID_34663877,T cell,STMN1,HMGB2,HIST1H4C,TUBA1B,TUBB,MKI67,CENPF,HMGN2,TOP2A,ASPM,PCLAF,TYMS,DUT,NUSAP1,H2AFZ,SMC4,UBE2C,CXCL13,PCNA,TMPO,PTTG1,ANP32B,CKS1B,H2AFV,RAN,SMC2,COTL1,TPX2,DEK,RANBP1,CORO1A,FABP5,RRM2,ANP32E,GZMB,SLC25A5,CENPE,CALM3,ATAD2,MAD2L1,KIF20B,CDK1,ENO1,PSMB9,NUCKS1,CDKN3,TPI1,IDH2,CLSPN,PSME2,ZWINT,SNRPB,BIRC5,SMC3,DLGAP5,PKM,RAD21,PARK7,CENPM,KNL1,ATP5MC3,JPT1,MZT2B,CHCHD2,PSMB8,KIF11,PGAM1,HELLS,SNRPD1,KPNA2,UBE2S,DNMT1,C12orf75,COX8A,HMGN1,NUDT1,RPA3,NUF2,TK1,CCNB2,MCM3,EZH2,ITM2A,DNAJC9,LMNB1,CARHSP1,HMMR,CCNB1,ARL6IP1,SUMO2,USP1,CKS2,HNRNPR,PHF19,DDX39A,DUSP4,SIVA1,NASP,GTSE1,DTYMK,HIST1H1D,NUCB2,HNRNPD,LDHB,CENPU,COX5A,MCM7,NCAPG,ARPC5,LDHA,ANXA5,BUB3,HIST1H1C,IFI16,CBX3,UBE2T,TMEM106C,CCNA2,SET,PSMA4,SGO2,CENPK,MRPL51,HNRNPF,SMC1A,NDC80,CENPW,NME1,MZT2A,SNRPD3,APOBEC3G,H2AFY,PSMA7,HNRNPA3,LSM4,PDIA6,H2AFX,PPP1CA,CCDC167,LSM3,SEPT7,FAM111A,HNRNPAB,TACC3,PSIP1,SKA2,FBXO5,XRCC5,SNRPG,PPM1G,CBX5,KIF23,PSMB3,RAC2,LSM5,SLBP,FAM111B,MIS18BP1,RRM1,ENTPD1,ATAD5,KIF22,TUBA1C,ERH,PA2G4,CYTOR,FANCI,ATP5PF,GMNN,KIF15,PSMB2,FEN1,PARP1,HIST1H1B,HNRNPM,HP1BP3,PSMD8,KIFC1,PTMS,SRSF10,LCP1,CEP55,SERBP1,PSMA5,DCTN3,GNG5,FDPS,BRCA2,CD8A,ATP5F1B,ANAPC11,GBP1,PRELID1,SLC25A3,ASF1B,CENPX,SUPT16H,CDC20,CLIC1,MZT1
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma,34663877,NK_cells_PMID_34663877,NK cell,GNLY,NKG7,SPON2,FGFBP2,PRF1,FCER1G,FCGR3A,PTGDS,KLRF1,TYROBP,KLRD1,CD247,CST7,CCL4,CCL3,GZMB,PLAC8,MYOM2,AREG,KLRB1,ARL4C,EFHD2,CTSW,IFITM2,ABHD17A,CCL4L2,GZMA,PLEK,ADGRG1,CLIC3,LITAF,METRNL,ITGB2,CDC42SE1,CX3CR1,GZMM,IGFBP7,RAP1B,CMC1,PYHIN1,CD7,PTPN12,ZEB2,JAK1,C1orf56,CEP78,FOSL2,IL2RB,AES,RUNX3,GPR65,HOPX,TXK,SPN,AKNA,TRDC,GK5,AKR1C3,NFE2L2,AC004687.1,BIN2,HCST,PTPRE,GNG2,S1PR5,KLF3,CD47,APMAP,GZMH,CCND3,FLNA,TLE4,DSTN,CEBPD,TGFB1,C1orf21,SH2D1B,MAPK1,HIPK2,SAMD3,NDUFB2,GSAP,TTC38,DBI,SYNE1,MBP,PIP4K2A,ITGAL,TES,MATK,ATM,GNPTAB,FAM49B,MYO1F,PTPN4,SYTL3,RAP2B,LPCAT1,VPS37B,GSTP1,PTGDR,MYBL1,GFOD1,MAP3K8,PRSS23,TFDP2,TBX21,LYN,MAPRE2,CHST2,CD164,CTBP2,RAB29,MTSS1,KLF2,HMGN3,RASSF1,CTSC,C12orf75,NCR3,TPST2,SORL1,SLA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma,34663877,B_cells_PMID_34663877,B cell,HLA-DRA,CD74,MS4A1,HLA-DRB1,CD83,HLA-DQB1,HLA-DPA1,HLA-DQA1,HLA-DPB1,BANK1,CD79A,CD37,MEF2C,MIR29B2CHG,IER5,SMIM14,TCF4,BASP1,POU2F2,TNFRSF13C,CD79B,RALGPS2,ID3,VPREB3,BCL11A,MARCKS,ARHGAP24,ADAM28,TNFRSF13B,HLA-DMA,SWAP70,HLA-DMB,LTB,CCDC50,LAPTM5,IGHM,CD40,1-Mar,IRF8,CTSH,RNASET2,CTSZ,LINC00926,TRIM38,NFKBID,GPR183,SNX2,SP110,PHACTR1,LY86,CD22,BCL2A1,LY9,SPIB,CD24,AIM2,CHCHD10,BLK,ORAI2,IFI30,SYPL1,HVCN1,NCOA3,PAX5,CIITA,LYN,CYBB,CD19,PKIG,STX7,FCMR,COBLL1,SESN3,SYNGR2,DAPP1,NCF1,SELL,TLR10,TMEM154,DRAM2,RIPOR2,NR4A1,KLF2,PRKCB,PARP14,CMTM6,PRDM2,CD55,ATP2B1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing reveals distinct tumor microenvironmental patterns in lung adenocarcinoma,34663877,Plasma_PMID_34663877,B cell,IGKC,IGLC2,IGHA1,IGLC3,IGHG3,IGHG1,JCHAIN,IGHG4,IGHA2,IGHGP,IGHG2,MZB1,SSR4,HERPUD1,DERL3,XBP1,SEC11C,PRDX4,FKBP11,HSP90B1,CD79A,SSR3,SDF2L1,FKBP2,ITM2C,SPCS2,MANF,TNFRSF17,DNAJB9,SPCS1,SELENOS,LMAN1,FCRL5,CD27,MYDGF,UBE2J1,CD38,SEL1L,PDIA6,SELENOM,ISG20,PLPP5,IFI6,SPCS3,RABAC1,TMEM59,SDC1,RRBP1,CRELD2,KDELR2,RAB30,NUCB2,EAF2,TXNDC15,HM13,ERLEC1,JSRP1,RPN2,CLPTM1L,POU2AF1,SRPRB,ALG5,TPD52,PDK1,OSTC,SLAMF7,PIM2,TMEM208,FNDC3A,PDIA4,CADM1,SPATS2,DNAJC3,FBXW7,NANS,SRM,KDELR1,SPAG4,HSPA13,HDLBP,CREB3L2,MARCKS,DNAJC1,HSPA5,DERL1,DUSP5,ANKRD28,SEC61B,TMED9,PPIB,TENT5C,SERP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD8_CD8-C1-LEF1_PMID_29942094,T cell,CCR7,SELL,LEF1,TCF7,TXK,LDHB,NOSIP,LDLRAP1,SERINC5,LRRC75A-AS1,MYC,PRKCQ-AS1,SNORA33,RIPOR2,LRRC75A,TRABD2A,TMEM123,PABPC1,ABLIM1,MAL,TPT1,DGKA,NPM1,FOXP1,SATB1,NELL2,CD55,TXNIP,RACK1,LOC100289511,NDFIP1,FCMR,ACTN1,PIK3IP1,GAS5,THEM4,ATM,FLT3LG,SRSF5,PIM2,SNHG8,IL6ST,GAS5-AS1,LINC00861,SARAF,TESPA1,RASGRP2,LINC01550,GIMAP7,RSL1D1,OXNAD1,LIMD2,SORL1,UBA52,FAU,PDE3B,EIF2S3,EIF3E,C6orf48,AES,EEF2,RGS10,HAPLN3,C1orf162,HNRNPA1,LEF1-AS1,PPP1R2,SLC7A6,NACA,PFDN5,NAA16,FBXO32,BACH2,RASGRF2,ICAM2,TMEM131L,SNHG6,CAMK4,TMEM243,GPR155,ST6GAL1,TNRC6B,TMEM63A,NSUN5P2,SPTBN1,NUCB2,LINC02067,FTL,SNHG5,PASK,MCMDC2,LEPROTL1,STK38,RCAN3,PCED1B,NIPAL3,TOMM7,PNISR,NOP53,NAP1L1,PDK1,EIF3L,TRAF3IP3,RNF138,MAPKAPK5-AS1,PRMT2,C1orf228,BTF3,PCED1B-AS1,SRSF6,LGALS3BP,LUC7L3,ITGA6,SLC12A7,HSP90AB1,ANP32B,DPH5,PRR29,CASP6,IL6R,MLXIP,STX16,ZFAS1,C1orf56,EPHX2,CUL9,MKRN1,GIMAP1-GIMAP5,PRKCA,CHMP7,CDC42SE1,MFNG,ARHGAP15,APEX1,STMN3,GIMAP5,CRTC3,CIAPIN1,DSEL,NPAT,SMDT1,ATP6V1G1,PLSCR3,LSR,PYCR2,EIF4B,SELENOH,SF1,TMEM256-PLSCR3,HINT1,RAPGEF6,GPX1,GNL3,ST13,CDK5RAP3,LEFTY1,SNURF,43349,FYB1,PGGHG,ST3GAL1,TMEM204,CNST,MGAT4A,SAMHD1,ESYT2,RIC3,UXS1,PSIP1,CEACAM21,COX4I1,ATXN7,FXYD5,ADPRM,EIF3F,CARD10,POM121,TPP2,MSL3,SGTB,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD8_CD8-C2-CD28_PMID_29942094,T cell,IL7R,CD28,LYAR,TNFSF8,MCUB,GPR183,DUSP2,SESN1,MALAT1,EPB41,ATP2B1,CYB561,ZFP36L2,IL10RA,HELB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD8_CD8-C3-CX3CR1_PMID_29942094,T cell,FGFBP2,CX3CR1,FCGR3A,ADGRG1,PLEK,FCGR3B,KLRD1,S1PR1,LITAF,GZMH,FCRL6,GNLY,KLRG1,NKG7,S1PR5,PRF1,PLAC8,A2M,ZEB2,FGR,PXN,CST7,EFHD2,PRSS23,KLF2,TGFBR3,SYNE1,FLNA,BIN2,PATL2,LILRB1,TBX21,TARP,MYO1F,ITGB2,UCP2,C1orf21,PYHIN1,SPON2,PZP,ADRB2,PXN-AS1,LAIR2,ITGAL,APMAP,CTSW,HLA-C,TTC38,FCRL3,EMP3,ADD3,ZEB2-AS1,RAP1B,CYTH1,RASSF1,TPST2,MTSS1,TSPAN32,RAP2B,RASA3,ITGAM,MYO1G,CD47,C12orf75,SAMD3,RAP1GAP2,MYOM2,PFN1,SPN,ITGA4,SLC9A3R1,LPCAT1,USP28,SH3BP5,CD99,SLC44A2,SLAMF7,PTP4A2,CCND3,RAB29,PIK3R5,CEP78,ARHGAP25,RAB37,SH3BP5-AS1,OSBPL5,LINC00612,CYBA,SUN2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD8_CD8-C4-GZMK_PMID_29942094,T cell,GZMK,CCL4L1,ITM2C,CD74,CCL4,AOAH,CXCR4,DTHD1,CCL3L3,CCL3L1,CLDND1,CD44,SH2D1A,TRAT1,EOMES,CCL5,F2R,TC2N,FAM102A,PVRIG,PDE4DIP,CMC1,CRTAM,NEK7,EPHA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD8_CD8-C5-ZNF683_PMID_29942094,T cell,ZNF683,CAPG,ITGA1,STK17B,JUN,ADAM19,CKLF-CMTM1,CKLF,CXCR3,XCL1,PELO,CTSA,PLTP,VIM,PLP2,SUSD3,CD69,GLUL,S100A11,ZYX,CISH,XCL2,SOCS1,PFKFB3,FAM129A,SMG1P3,SLC7A5P2,SKIL,PTGER4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD8_CD8-C6-LAYN_PMID_29942094,T cell,HAVCR2,SIRPG,ITGAE,GZMB,CCL3,TIGIT,ENTPD1,PDCD1,RBPJ,RGS1,CXCR6,CD63,SAMSN1,CD82,CCND2,ENTPD1-AS1,HLA-DRA,FKBP1A-SDCBP2,COTL1,TOX,GZMA,TNFRSF9,MIR155HG,FKBP1A,TPI1,KLRC1,APOBEC3G,CTSD,CXCL13,IFNG,DUSP4,APOBEC3C,LYST,GPR25,CD7,FASLG,ACP5,APOBEC3F,BST2,PAG1,HLA-DRB5,PARK7,SRGAP3,HLA-DRB6,KRT81,CD27-AS1,CD27,LAG3,KRT86,TNFRSF1B,ALOX5AP,PHLDA1,MX1,IFI6,HLA-DRB1,PTPN7,MIR155,IVNS1ABP,MIR4632,ITM2A,MYO7A,GALNT2,PKM,HLA-DQB1,ANXA5,TNIP3,AHR,KLRC2,RAB27A,HLA-DMA,IDH2,FUT8,PLSCR1,ID2,IL2RB,PTPN22,ISG15,RIN3,CD8A,LGALS3,IGFLR1,PTTG1,PGK1,HLA-DPA1,SNRPB,OASL,LDHA,NDFIP2,ARHGAP9,SLA,IFI44,APOBEC3D,LINC00299,HMGN1,LSP1,SEM1,PDIA6,IFI44L,DNPH1,SIT1,BLOC1S1-RDH5,RUNX2,IFI27L2,IKZF3,BLOC1S1,RHOA,CALM3,PARP9,MYO1E,RANBP1,OAS1,ATP10D,FIBP,SURF4,IFI35,CTLA4,CYTOR,TBCD,FBXO10,ASXL2,TRAF5,CD96,MIR497HG,SLA2,PTBP1,ATP6V1C2,EPSTI1,HNRNPLL,SH3BGRL3,GNG5,SYNGR2,CDK6,CBLB,ADGRE5,FABP5,VDAC1,PRDX5,SEL1L3,COX5A,SRGN,GALNT1,LY6E,PLPP1,IFI16,SARDH,POMP,R3HDM1,USP18,PRKAR1A,CD2,EZR-AS1,YARS,DYNLL1,SMC4,C5orf58,PARVG,OAS2,SP140,PDE4D,UBE2A,CHST12,SUPT3H,HSPB1,RSAD2,GALM,RHOC,LCP2,B3GNTL1,ABCA2,EIF2AK2,UBE2L6,LOC606724,GPI,EWSR1,CTSC,ATP5G3,DTX3L,DRAP1,RGS2,GBP2,NAPA,RAB3GAP1,SUB1,LAP3,SRRT,ABI3,KLRC3,HMGN2,TCIRG1,GPANK1,STAT3,DDX60,PAM,HM13,TTN,PLA2G16,CORO1A,C7orf25,XAF1,ACTR3
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD8_CD8-C7-SLC4A10_PMID_29942094,T cell,KLRB1,SLC4A10,NCR3,LST1,LTB,CCR6,DPP4,SPOCK2,SLAMF1,JAML,DUSP1,RORA,TNFRSF25,CTSH,ERN1,IFNGR1,MAF,IL18RAP,MPZL3,ZBTB16,ODF2L,IL23R,HPGD,PERP,TNFAIP3,PHACTR2,TNFAIP8,COLQ,ABCB1,IL4I1,GPR171,PDCD4,RORC,IKZF2,LOC643733,CRACR2A,CREB3L2,PIP4K2A,VSIR,AQP3,ADAM12,MKNK1-AS1,S100A4,CHD7,GBP5,LPCAT4,ELK3,THRA,GALNT10,MBOAT1,CEBPD,SEC61A1,IL12RB2,TMIGD2,LCP1,SPECC1L,SNHG16,MKNK1,PER1,DDIT4,PBXIP1,LAPTM5,GTDC1,LPXN,NFKBIA,BBIP1,MYO5A,SEC11C,LPAR5,MIR3652,ZFP36L1,RARG,H3F3B,HACL1,CLINT1,NR1D1,ACAA2,NMT2,NDRG1,OSTC,LUZP1,HELZ,TBXAS1,SYTL2,DENR,HSP90B1,GPR65,MIR4680,CD48,BCL2,OSBPL9,EML4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD4 Tconv_CD4-C1-CCR7_PMID_29942094,T cell,CCR7,SELL,TXK,TCF7,LEF1,PRKCQ-AS1,LINC00861,SNORA33,NOSIP,FCMR,LDLRAP1,RIPOR2,LRRC75A,SATB1,LRRC75A-AS1,MYC,IL6ST,NPM1,LDHB,CD55,MAL,ABLIM1,RACK1,TRABD2A,FOXP1,LOC100289511,FTL,FAU,ACTN1,ATM,GAS5-AS1,UBA52,TXNIP,APBA2,TPT1,LEF1-AS1,GAS5,TAPT1-AS1,NDFIP1,PIK3IP1,PABPC1,EPHX2,FHIT,RASGRP2,TOMM7,SRSF5,LINC01550,SARAF,BACH2,NUCB2,OXNAD1,ANKRD55,LIMD2,PCED1B-AS1,C6orf48,CDC42SE1,CCDC18-AS1,PFDN5,CAMK4,NACA,C1orf56,EIF3E,PRKCA,TSHZ2,EIF3L,TMEM204,PCED1B,EEF2,SESN1,EIF2S3,MLLT3,EPB41,SNHG8,TMEM63A,TTC3,BTG1,PDK1,TMC8,PDE3B,KLF3-AS1,TMEM131L,LUC7L3,RGS10,EIF3H,MCUB,COX4I1,FBL,RSL1D1,SNHG5,SMDT1,CEACAM21,OPRM1,C1orf162,GLG1,IPCEF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD4 Tconv_CD4-C2-ANXA1_PMID_29942094,T cell,LTB,KLF2,AES,BIRC3,GPR183,GIMAP7,GSTK1,ICAM2,TRADD,SERINC5,SORL1,NOP53,PTGER2,ADD3,RNASET2,FLT3LG,RASA3,GIMAP1-GIMAP5,GIMAP5,IL7R,CRIP2,PLSCR3,C16orf54,TESPA1,DGKA,PRR29,IL6R,MAP3K1,CDC14A,TMEM256-PLSCR3,TMEM123,LPAR6,ARHGAP15,CD28,INPP4B,PIM2,GALT,TAGAP,TTC39C,STK38,AQP3,THEM4,LIME1,GIMAP4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD4 Tconv_CD4-C3-GNLY_PMID_29942094,T cell,NKG7,GZMH,GNLY,PRF1,FGFBP2,GZMB,CCL5,TARP,CX3CR1,KLRG1,PLEK,CTSW,A2M,ADGRG1,FCRL6,ZEB2,HLA-DPB1,LITAF,PLAC8,MYOM2,PATL2,S1PR1,PZP,SAMD3,FLNA,S1PR5,SYNE1,MYO1F,EFHD2,HLA-DPA1,RAP1B,HOPX,PXN,ADRB2,RASSF1,SLAMF7,GLUL,CTSC,ID2,PYHIN1,TBX21,C12orf75,ABI3,RUNX3,SLC9A3R1,LGALS1,TGFBR3,ITGB1,LYAR,HCST,BIN2,PTPN4,GPR65,ITGB2,SPN,APMAP,ITGAL,PIP4K2A,ITGAM,LAIR2,MIAT,PAXX,DIP2A,PXN-AS1,TPST2,MIR3615,ZEB2-AS1,CD300A,TRG-AS1,S100A4,GZMM,CD320,DSTN,PFN1,TSPAN32,IRF1,IL10RA,SYTL3,LINC00612,PTGDR,CALM1,EHD1,MYO1G,TOB1,PRSS23,GNG2,ARL4C,CHST12,EMP3,CD52,CYTH4,PRMT2,CD3G,CD47,SPON2,PARP8,PTP4A2,CDC42EP3,GSTP1,ZNF683,FGR,IFITM2,BTN3A2,PPP1CA,CAPN2,AHNAK,C5orf56,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD4 Tconv_CD4-C4-CD69_PMID_29942094,T cell,FOS,CD69,DUSP1,FOSB,CCR6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD4 Tconv_CD4-C5-EOMES_PMID_29942094,T cell,GZMK,GZMA,CST7,CCL4,CCL4L1,CD27,CCL3L3,DTHD1,F2R,CD27-AS1,CD74,APOBEC3G,AOAH,CCL3L1,EOMES,APOBEC3D,PVRIG,DUSP2,WNK1,PRR5L,CLDND1,HNRNPLL,DENND2D,CMC1,PTPRCAP,HSPA1B,CYTOR,ITM2C,CCR5,LOC643733,PILRB,SLF1,CRTAM,WIPF1,SAMD9L,GRK2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD4 Tconv_CD4-C6-GZMA_PMID_29942094,T cell,CXCR6,HLA-DRB5,HLA-DRB1,HLA-DRB6,ALOX5AP,CAPG,LGALS3,ADAM19,JAML,CXCR3,ITGAE,HLA-DRA,FAM129A,CD2,ANXA2,HLA-DQB1,SH3BGRL3,CKLF,CKLF-CMTM1,ANXA2P2,CD99,CLIC1,JUN,VIM,PTGER4,TMEM173,ACTN4,ANXA1,LINC00892,C15orf53,LCP1,RUNX2,CTSH,IFI44,PLP2,ADGRE5,CD63,CD96,CD58,TXN,LAPTM5,ATP2B4,CCL20,ANKRD28,ARHGAP18,LMNA,TYMP,CD40LG,GPR171,ACTG1,PDE4B,ZFP36,MIR4435-2HG,SLAMF1,LCP2,GPR25,HLA-DQB2,PPP3CA,SKIL,MKNK1,ATP1B1,GLIPR2,REEP5,S100A6,LSP1,SEL1L3,MIR4632,PERP,ELOVL5,S100A11,CD44,TNFSF14,UBC,PELO,PBX4,SLC5A3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD4 Tconv_CD4-C7-CXCL13_PMID_29942094,T cell,CXCL13,SRGN,RGS1,CTLA4,TNFRSF18,DUSP4,RBPJ,NR3C1,RNF19A,PDCD1,TIGIT,BHLHE40-AS1,TNFRSF4,TOX,ITM2A,SNX9,CDK6,SLA,DNPH1,CD82,SIRPG,ITPR1,TPI1,FKBP5,IQGAP1,PKM,YWHAQ,MYO7A,SAMSN1,SLC4A5,FKBP1A-SDCBP2,PTPN7,FKBP1A,LYST,EPSTI1,BST2,ZBED2,MT1A,RHOC,SMARCA2,MTHFD2,MT2A,CTSD,ICOS,BHLHE40,BTLA,NFATC2,TFRC,LIMS1,NAP1L4,OAS3,TNFAIP3,ENTPD1,SRGAP3,APOBEC3C,BATF,CD7,SH2D2A,GNG5,PDE4D,SUSD6,SEM1,MAF,VMP1,AHR,GALNT2,SLC1A5,ANXA5,MIR497HG,FAM53B,NDFIP2,PLSCR1,TIAM1,PRKAR1A,WARS,PGAM1,IL2RB,MX1,EED,CHN1,WDR83OS,PARK7,AGFG1,OASL,NCF4,PAM,CTSB,IFI6,NPDC1,PTPN13,LASP1,C9orf16,NAB1,IL21R,ARPC2,IFI16,LRMP,CFLAR,EZR,RGS2,NFKBIA,EPS15,TOX2,CBLB,CDV3,CORO1C,STAT3,EZR-AS1,PDIA6,PHTF2,PSMD8,SCO2,GALM,COTL1,PTPN1,CORO1B,CFLAR-AS1,ATP5J2,CALM3,TMEM64,MOB1A,CCDC6,TPM4,PGK1,NEDD9,OAS1,IGFLR1,PPM1M,TRAF5,HIF1A,ZC2HC1A,SARDH,ACADVL,PAG1,TANK,POMP,VCP,MIR155HG,IL4R,C5orf58,IRF5,DBI,SEC61B,SYT11,CTSL,TMEM167A,AGFG2,ISG15,LGALS9,DYNLL1,ADCY3,SEC11A,APOBEC3F,PFKFB3,PSTPIP1,SURF4,RNF115,LDLRAD4,RHOA,PTTG1,SLC4A7,CPD,BSG,RBM8A,WDR83,NDUFB3,PLEKHO2,ELMO1,IL2RG,LINC01281,ARAP2,LDHA,FUT8,CAMK1,LRRC8D,NUDT21,RNASEK-C17orf49,ATP6V1C2,SDF4,ARPP19,PSMB3,VOPP1,PROSER1,COPE,LAP3,PRDM1,SEC14L1,HNRNPL,TXNDC17,VDR,HOMER3,ZNF410,GPI,MLF2,BUD31,SRI,ECH1,FAM118A,THADA,COX7B
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD4 Treg_CD4-C8-FOXP3_PMID_29942094,T cell,TXNIP,S1PR1,CD52,UBXN11,LINC00861,AES,LEF1,S100A10,KLF2,FCMR,RIPOR2,SNORA33,C1orf56,RASGRP2,LIME1,LINC02067,PI16,ITGB7,MCUB,CCR7,CDC42SE1,LDHB,ZGPAT,CDC25B,TMEM123,RASA3,LPAR6,SELL,CD47,ADD3,TXK,UBA52,TRAF3IP3,TAGAP,GIMAP1,PRKCQ-AS1,GSTK1,EPB41,CCR10,BIN2,CCND3,FOXP1,FLT3LG,RNF214,SELPLG,EMP3,STK38,TMEM63A,MAL,ATP2B1,LIMD2,MBP,VSIG1,TMEM204,RAB37,DGKA,SORL1,ITGA6,LDLRAP1,CASP8,RNF125,MFNG,MPRIP,VSIR,MYC,CCDC66,ICAM2,IL10RA,PXN,KLF3,ARHGAP45,SMCHD1,S1PR4,SYTL1,CNN2,PRR29,CARD10,PDP1,SPSB3,FAM102A,PTGER2,LITAF,CAMK4,RAP2B,NDUFB9,EVL,PLEKHA1,C12orf75,ANXA2,PLSCR3,ITGB1,ARHGEF18,KCNA3,PYHIN1,IQGAP2,MYO1F,CRIP2,EVI2B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,CD4 Treg_CD4-C9-CTLA4_PMID_29942094,T cell,TNFRSF18,CCR8,CXCR6,CD7,IL1R2,CTSC,TNFRSF9,DUSP4,SH2D2A,TNFRSF4,BATF,CREM,RGS1,ICOS,TNFAIP3,IL2RB,CTLA4,PHTF2,SRGN,IFI6,LAYN,VDR,RHOC,TYMP,FOXP3,STAT3,LYST,CXCR3,NAMPT,ENTPD1,PHLDA1,DDIT4,DNPH1,CCND2,SDC4,PKM,IL21R,CTSB,SAMSN1,CD82,SCO2,SLAMF1,MAF,NDFIP2,APOBEC3G,PTPN7,IL1R1,TNFRSF1B,SIRPG,MIR4632,TPI1,STK17B,LDHA,FOS,MIR4435-2HG,PTPRJ,TIGIT,PGAM1,APOBEC3C,CST7,TBC1D4,SPATS2L,TFRC,NEDD9,ENO1,MX1,MIR497HG,EFHD2,BST2,ZFP36L1,FKBP1A-SDCBP2,JUN,SLC5A3,BCL2L1,HAVCR2,NFKBIA,SAT1,FKBP1A,PFKFB3,CKLF-CMTM1,CTSD,SPOCK2,GALM,FMNL3,HSPA1B,SLC3A2,DUSP2,CARD16,LAIR2,ANKRD10,CD177,ENTPD1-AS1,CKLF,MAGEH1,IQGAP1,IL21R-AS1,PTTG1,ACP5,VCP,HNRNPLL,SOCS1,IL4R,PRKAR1A,PHACTR2,LTA,SNX9,RBPJ,HIF1A,MKNK1,EPSTI1,HSPB1,ASB2,OAS3,IL18R1,CD79B,TRAF1,TNIP1,NAB1,IGFLR1,SURF4,NCOA3,CTNNB1,CREB3L2,CFLAR-AS1,CD2,SLC16A1,GRINA,PPP1CB,PTPN22,LAPTM4B,HSPA1A,SYTL3,CSF1,NRBP1,SYNGR2,GCNT1,EBI3,ZFP36,HSPA1L,VMP1,LAP3,RNF213,SLC35F2,IFI44,CYCS,RHBDD2,COMMD3,TBC1D8,PGK1,PTPN1,MICAL2,CD58,CALR,TOX2,LY75,NFAT5,PDCD1,ATP6V1C2,PRPF40B,TANK,PFKP,SKIL,FAM53B,FRMD4B,DYNC1I2,COMMD3-BMI1,PICALM,IL2RA,COX5A,IL12RB1,PRNP,GADD45A,CD74,ARPP19,THADA,CFLAR,TET2,PRDX3,CDK6,EPHX2,OTUD5,SELENOT,TLK1,IL12RB2,ETV7,GNAS,SLC7A5,RUNX3,ISG15,KDM5B,PPP1R16B,CRADD,PDIA6,CBFB,IKZF4,SEC14L1,IDI1,LOC100130476,CDKN1A,NSF
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,TNFRSF9+/- Tregs/CD4-C9-CTLA4(TNFRSF9-)_PMID_29942094,T cell,CXCR4,RARRES3,TXNIP,RGS1,SYNE2,ZFP36L2,ALOX5AP,PYHIN1,GIMAP4,EPB41,EVI2B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Global characterization of T cells in non-small-cell lung cancer by single-cell sequencing,29942094,TNFRSF9+/- Tregs/CD4-C9-CTLA4(TNFRSF9+)_PMID_29942094,T cell,TNFRSF9,IL1R2,CCR8,TNFRSF18,DNPH1,PKM,TNFRSF4,SERPINB9,ENTPD1,DUSP4,IL21R-AS1,LAYN,ICOS,VDR,PARK7,IL21R,CCND2,TRAF1,MIR4632,LGALS1,NAMPT,BIRC3,MAP2K3,BATF,BCL2L1,GRINA,GCNT1,LAIR2,PIM3,NME1-NME2,TNFRSF1B,HSPB1,IL4R,HSPA5,BST2,CST7,PHLDA1,APOBEC3G,NDUFB2,SYNGR2,SDC4,SLC25A3,LDHA,IL2RA,TXN,FKBP1A-SDCBP2,CTNNB1,ATP5G3,DYNC1I2,ZBTB32,SH2D2A,TXNDC17,PTPN1,EFHD2,IL1R1,CREM,COX5A,CALR,ATP6V1C2,PDIA6,CD177,TFRC,PRF1,CXCR6,GNG5,HSP90AB1,TYMP,CRADD,VDAC1,DUSP2,HM13,FMNL1,FKBP1A,PSMD11,DYNLL1,YWHAQ,APOBEC3C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,CD8+ T cells/cell state 1_PMID_32385277,T cell,RGS1,DUSP4,COTL1,RGCC,CXCR4,SAMSN1,GZMB,CD2,TNFAIP3,GZMA,ALOX5AP,CREM,APOBEC3G,CKLF,CD7,SRGN,ZNF331,CCL4,CD52,ITM2C,LDHA,RBPJ,HLA-DRA,CD63,ISG15,LGALS3,HLA-DRB1,CLEC2B,ITM2A,CD27,FKBP1A,LINC00152,PGK1,SH3BGRL3,VIM,ZNF683,LEPROTL1,JAML,SUB1,PSME2,CLIC1,LAG3,CYTIP,MYL6,TPI1,CXCR6,CCL3,STK17B,YPEL5,ZFP36L2,FABP5,CD96,ID2,MCL1,EVL,LSP1,DYNLL1,CD69,BTG1,SRSF2,CORO1A,CTSD,REL,PARK7,ZFP36,PLP2,CD3D,PSMA7,LY6E,S100A11,ELF1,BIRC3,DRAP1,PTMS,IFNG,RGS2,CD74,CALM2,PSMB9,PKM,ACTG1,ARPC1B,UBC,TYMP,SHFM1,AC092580.4,HLA-DPA1,IDH2,HLA-DMA,NDUFS5,ISG20,TMSB4X,BLOC1S1,ATP1B3,ENO1,POMP,ANXA5,PGAM1,HERPUD1,RGS10,HMGN1,SUMO2,CHCHD2,RABAC1,TRAC,IFI6,EZR,STK17A,RHOH,COX5A,CYCS,PSMB3,COX8A,DNAJB6,HLA-A,CFL1,JUNB,IGKC,RUNX3,G3BP2,COX7A2,TAP1,SELK,ARPC3,CCL4L2,FAM46C,APOBEC3C,PSME1,BST2,CTSC,COX7B,SLC25A5,CD44,JMJD6,UBE2L6,FYB,TUBA4A,HLA-DPB1,ATP5G3,NR4A2,ATP5E,ALDOA,SOD1,TXN,NDUFA4,PSMB8,CD8A,CAPZB,FAM177A1,IFI27L2,RBM8A,REEP5,LYST,TSPO,DBI,HLA-DQB1,CXCR3,DDIT4,HN1,H2AFZ,CCL5,ABRACL,ATP5L,UBL5,TRBC2,HLA-DQA1,PRDX1,MYL12B,IFI16,DNAJA1,VDAC1,RAN,COX6C,JUND,DUSP2,UBE2D3,EML4,HNRNPA3,SRP14,ARPC2,LCK,ATP5C1,CRIP1,SRSF7,NEDD8,RAB27A,PSMA4,PSMA1,TIGIT,COX6A1,SAT1,UBE2L3,GYPC,GZMH,HMGB1,SDCBP,SERBP1,PSMD8,NDUFB8,ARHGDIB
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,CD8+ T cells/cell state 2_PMID_32385277,T cell,GZMK,TXNIP,IL7R,LTB,CMC1,GIMAP7,LYAR,MT1X,IGKC,GIMAP4,TOMM7,CCL3L3,CCDC109B,IGLC2,EIF3E,ATM,GIMAP1,AC090498.1,CD48,LIMD2,CNBP,GLTSCR2,C6orf48,MT2A,MALAT1,N4BP2L2,PABPC1,SF1,GCC2,KLRG1,CIRBP,PDCD4,TRAF3IP3,SMDT1,ITM2B,ISCU,PIK3IP1,FXYD5,CD27,COMMD6,HINT1,POLR2J3,FAU,UBA52,PFDN5,PPDPF,SARAF,ANKRD12,COX7C,GNB2L1,GZMM,EIF3G,CD3E,NBEAL1,43709,GMFG,PNISR,EEF2,SH2D1A,43714,NAP1L1,EVI2B,LDHB,EIF3L,SNRPN,OCIAD2,TMA7,C12orf57,SNRPD2,CD37,ZFAS1,KRTCAP2,TSTD1,PEBP1,TECR,ERP29,ANAPC16,ATP6V1G1,MIF,AAK1,ITM2C,EIF3K,DNAJB1,PLP2,GPX4,ACAP1,PCSK7,NDUFA3,EIF4B,TRAC,APMAP,GPSM3,NACA,OST4,CD8B,SNHG8,KRT10,UQCR11,EIF3D,CMPK1,MPHOSPH8,TPT1,CUTA,SEC62,SERP1,GABARAPL2,PTGES3,RNASET2,ST13,EIF3M,NKTR,TAF7,HNRNPA1,EIF3F,STK17A,HMGB2,CCNI,PYURF,ATP5O,EIF3H,CSDE1,HCST,VAMP2,ANP32B,UQCRB,HSPE1,TMEM258,RARRES3,TOMM20,PRR13,ARL6IP4,CNN2,NSA2,BTF3,SSR2,SIGIRR,SPCS1,C14orf2,SSU72,GTF3A,TRBC1,SRP9,C19orf60,C11orf31,PCBP2,SUN2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,CD8+ T cells/cell state 3_PMID_32385277,T cell,FGFBP2,NKG7,GZMH,GNLY,KLRD1,GZMB,SFTPC,S100A4,LGALS1,TRGC2,PRF1,FCGR3A,LITAF,IER2,FLNA,CCL4,PLAC8,ANXA1,EMP3,CTSW,NR4A2,ZEB2,CST7,PLEK,ITGB2,EFHD2,KLF2,ID2,S100A10,KLRG1,IFITM2,ARL4C,C12orf75,DUSP2,PPP2R5C,IRF1,TSC22D3,MYO1F,AES,BIN2,ZFP36,GADD45B,NEAT1,FTL,RORA,CMC1,MYO1G,CALM1,ITGB1,FOS,APOC1,PNRC1,TPST2,FTH1,S100A6,GZMM,DSTN,TMSB10,GNG2,SPN,TGFB1,AHNAK,HSP90AA1,UCP2,SYNE2,DUSP1,AKNA,RSRP1,KLF6,CDC42SE1,BTG2,CCND3,HOPX,CREM,PTP4A2,LRRFIP1,AMD1,XBP1,PPP1R15A,MATK,TAGLN2,SRGN,SUN2,ARPC2,RBM39,UBB,HLA-E,PIK3R1,HSPA8,CDC42,TCF25,PTPRC,SAMD3,RAP1B,APMAP,RUNX3,BRD2,YBX1,SRSF2,YWHAQ,TUBA1B,DNAJA1,DDX3X,PRMT2,PPIA,SAT1,NFKBIA,SLC2A3,DOK2,ARF6,YWHAZ,LYAR,HSPA5,MBP,ANXA6,GLTSCR2,EEF2,DDX5,PSAP,CD99,CD3G,DNAJB6,SELK,CYBA,BTN3A2,MALAT1,DDIT4,CD47,SCP2,HLA-B,PRKCH,SLC9A3R1,CD247,EIF4B,ADGRE5,PYHIN1,CALR,PTPN7,TXNIP,PFN1,CTSC,CCNL1,EIF1,CD52,CD53,SRSF11,SRSF7,EIF4A1,REL,H3F3B,C9orf142,IDS,HLA-DRA,JUND,MSN,RTN4,S100A11,HLA-C,RBM3,MYL12A,ANXA2,VAMP2,MCL1,CLK1,SLA,SIGIRR,ARHGAP30,CHST12,BCLAF1,MAP1LC3B,EIF4A2,NCL,C19orf43,DBI,EIF5,DHRS7,SFPQ,ATRX,C9orf78,ARL6IP1,ARPC4,SLC25A3,SRSF5,SRRM2,TUBA1A,PRPF38B,ARPC5,BZW1,TUBA4A,HNRNPH1,SRSF3,EIF3L,CTSS,TPM3,YPEL5,NDUFB7,MBNL1,CCL4L2,SLC25A6,P4HB
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,Myeloid cells/Monocyte_PMID_32385277,Monocyte,CTSS,FCN1,S100A8,S100A9,LYZ,VCAN,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,Myeloid cells/Macrophage_PMID_32385277,Macrophage,LGMN,CTSB,CD14,FCGR3A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,Myeloid cells/mo-lineage_PMID_32385277,Monocyte,MAFB,MAF,CX3CR1,ITGAM,CSF1R,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,Myeloid cells/Alveolar-Mac_PMID_32385277,Macrophage,MARCO,FABP4,MCEMP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,Myeloid cells/Anti-inflammatory_PMID_32385277,Macrophage,CD163,APOE,SEPP1,C1QA,C1QB,C1QC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,Myeloid cells/Pro-inflammatory_PMID_32385277,Monocyte,CXCL8,IL1B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,Myeloid cells/Cycling_PMID_32385277,Monocyte,STMN1,MKI67,TOP2A,CDK1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,Myeloid cells/DC_PMID_32385277,Dendritic cell,CLEC10A,CD1C,CLEC4C,PTCRA,CCR7,LAMP3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,DCs/CD1c+ DCs (LCs)_PMID_32385277,Dendritic cell,CD1C,ITGAX,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,DCs/CD141+ DCs_PMID_32385277,Dendritic cell,CLEC9A,XCR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,DCs/CD207+CD1a+ LCs_PMID_32385277,Dendritic cell,CD207,CD1A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,DCs/Activated DCs_PMID_32385277,Dendritic cell,CCR7,LAMP3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,DCs/pDCs_PMID_32385277,Dendritic cell,IL3RA,CLEC4C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,DCs/CD163+CD14+ DCs_PMID_32385277,Dendritic cell,CD14,CD163,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,B lymphocytes/GC B cells in the DZ_PMID_32385277,B cell,STMN1,AICDA,MKI67,BIRC5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,B lymphocytes/GC B cells in the LZ_PMID_32385277,B cell,LMO2,BCL2A1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,B lymphocytes/GrB-secreting cells_PMID_32385277,B cell,GZMB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,B lymphocytes/Follicular B cells_PMID_32385277,B cell,MS4A1,HLA-DRA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,B lymphocytes/MALT B cells_PMID_32385277,B cell,JCHAIN,IGHA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,B lymphocytes/Plasma cells_PMID_32385277,B cell,IGHG1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/CD4+ T_PMID_32385277,T cell,Il7R,CD4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/CD8+ T_PMID_32385277,T cell,CD8A,CD8B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/Naïve_PMID_32385277,T cell,TCF7,SELL,LEF1,CCR7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/Exhausted_PMID_32385277,T cell,LAG3,TIGIT,PDCD1,HAVCR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/Cytotoxic_PMID_32385277,T cell,IL2,GZMA,GNLY,PRF1,GZMB,GZMK,IFNG,NKG7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/Treg_PMID_32385277,T cell,IL2RA,FOXP3,IKZF2,TGFB1,TGFB3,TGFBI,TGFBR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/T follicular helper_PMID_32385277,T cell,MAF,CXCR5,PDCD1,CXCL13,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/T helper 17_PMID_32385277,T cell,IRF4,CREM,NR4A2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/T helper 1_PMID_32385277,T cell,STAT4,IFNG,IL12RB2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/T helper 2_PMID_32385277,T cell,GATA3,STAT6,IL4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/gamma delta T_PMID_32385277,T cell,TRDC,TRGC2,TRGC1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma,32385277,T/NK cells/NK_PMID_32385277,NK cell,XCL1,FCGR3A,KLRD1,KLRF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing,32822576,Macrophages/0_PMID_32822576,Macrophage,APOE,RNASE1,SPP1,C1QB,C1QA,C1QC,FOLR2,GPNMB,LGMN,TREM2,PLTP,VSIG4,APOC1,CTSD,ACP5,CXCL1,NUPR1,PLD3,A2M,CD9,MRC1,SLCO2B1,MS4A4A,SLC40A1,PLAU,DAB2,MSR1,RGS1,ALOX5AP,CD14,B3GNT7,CTSB,F13A1,CTSL,HLA-DQA2,CAPG,CD59,EGR2,C2,TMEM176A,CTSC,AXL,GCHFR,FTL,AKR1B1,HEXA,HEXB,TMEM176B,LMNA,ITM2B,NRP1,PLIN2,PMP22,JUN,HLA-DPA1,GRN,CREG1,LIPA,GSN,FCGRT,DHRS3,CD163,FUCA1,CCL2,TSPAN4,LGALS3BP,TXNIP,ARHGAP18,HLA-DMA,HLA-DPB1,GPR34,CD74,CPM,HLA-DMB,SEPP1,MS4A6A,MS4A7,CCL3L1,HLA-DRA,CD68,FCGR2A,HLA-DRB1,GPX3,VAT1,PEBP1,FABP5,GAL3ST4,RNASE6,YWHAH,CTSA,MFSD1,ID3,FBP1,SDS,CYP27A1,CD81,SERPINF1,CD63,MMP9,OLFML2B,STAB1,COMT,CTSZ,FCGR3A,SERPING1,RASSF4,CD84,ABHD12,GADD45B,ASAH1,ATP6AP2,TNFSF13,LGALS1,EIF4A3,LGALS3,EGR1,GADD45G,LAPTM4A,CXCL16,ALCAM,HLA-DRB6,TMEM14C,SCPEP1,HLA-DOA,CALM1,PEPD,ANXA2,BAG3,SPRED1,CXCL3,PXDC1,PPT1,CSTB,HSPB1,PRDX1,NRP2,SLC35F6,RNASET2,DNASE2,PLA2G15,MGST3,UBB,C3AR1,LINC01094,BCAP31,SLC16A10,FPR3,NPC2,SLC25A44,FCGR2B,GLUL,NPL,TMEM70,LAIR1,TMEM59,ALDH2,FN1,ATF3,ENPP2,LRPAP1,CALU,VKORC1,SLC7A8,PLA2G7,BLVRB,DNAJB1,ADAP2,HERPUD1,HLA-DRB5,HLA-DQB2,GPX1,SYNGR2,MMP19,HLA-DQA1,GLMP,ATP6AP1,AKR1A1,TGFBI,MYO5A,GGTA1P,CORO1C,MAF,MDH1,SNX2,HMOX1,TUBA1C,TECR,LAMP2,NEU1,IL10,DST,C3,ZMYM6NB,ATRAID,CD72,LHFPL2,CSF1R,FOS,RHOB,KCNQ1OT1
Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing,32822576,Macrophages/1_PMID_32822576,Macrophage,THBS1,VCAN,FCN1,RNF144B,EREG,CFP,FCAR,CD300E,EHD1,S100A9,S100A8,TIMP1,AQP9,TNFRSF1B,PTX3,BASP1,LINC00936,TET2,LDLR,NLRP3,AMPD2,CSF3R,ITGAX,G0S2,S100A12,ATP2B1,CD55,FGR,SLC11A1,WTAP,IRAK3,RIN2,CDC42EP2,DENND5A,NFKBIZ,PPIF,MAP4K4,SAR1A,MTF1,RXRA,SERPINB9,ACSL1,BRE-AS1,LOC731424,IL1RN,IL1B,SAMSN1,JARID2,LPCAT1,IL1A,BTG1,OXSR1,NDEL1,SLC2A6,PTGS2,NEAT1,RASGEF1B,NFKB1,PRDM1,RILPL2,C5AR1,LILRA5,AREG,SLC2A3,METRNL,LUCAT1,SULF2,PTK2B,C19orf38,SLC7A5,TNIP1,MYO9B,OLR1,BCL2A1,MXD1,CCND3,BACH1,PDE4A,PDE4B,NAMPT,SLC25A37,IRS2,CTDSP1,KDM6B,IL6R,TNFAIP2,SLC43A2,MAP2K3,TOM1,PNRC1,PIK3R5,JUND,MEFV,QKI,CHSY1,IFITM2,NFKB2,TKT,ICAM3,STK10,LILRB2,LST1,CDC42EP3,PABPC1,CD44,CYTIP,ADGRE5,FGD4,PLAUR,COTL1,BANF1,NOTCH2,SRGN,MFSD2A,ADA,FAM49A,TNFAIP3,STK40,PAPSS2,CSNK1D,JOSD1,TPT1,LYST,GRAMD1A,CCL20,DUSP6,LRRC75A-AS1,ANPEP,MBOAT7,BCL6,AP1S2,TRA2A,UBR4,KYNU,EZR,FLNA,TMEM52B,CD48,CCDC69,NOD2,ZEB2,RYBP,SRRM2,ATP1B3,PTPRE,PNPLA8,EMILIN2,SUN2,CD52,DNTTIP2,ARGLU1,ATF4,RABGEF1,VAPA,SLC25A6,CFLAR,SLC36A4,NFKBID,SH3BP2,MDM4,CLEC12A,CHD1,IQSEC1,NCR3LG1,ETS2,CTNNB1,SERPINB1,C10orf54,UBA52,FOSL2,ZC3H12A,EAF1,ATP13A3,IVNS1ABP,EVI2B,SELPLG,AHNAK,INSR,METTL9,SYAP1,CAPZA1,BIRC3,PPP1CB,NFAT5,VMP1,POU2F2,SOD2,TLR4,ITPRIP,MYO1G,SPHK1,LINC-PINT,UBXN11,GK,SAT1,KCNAB2,HNRNPH1,ILF3,LILRB3,CREBBP
Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing,32822576,Macrophages/2_PMID_32822576,Macrophage,CXCL10,IDO1,GBP1,CXCL9,WARS,VAMP5,CXCL11,GBP5,APOBEC3A,FAM26F,SLAMF7,PPA1,RARRES3,GBP4,PSME2,ANKRD22,TNFSF10,IFIT2,TAP1,APOL3,PSMB9,TYMP,UBE2L6,LAP3,C15orf48,IRF1,IFITM1,GBP2,IFIT3,STAT1,IRG1,HIVEP3,PARP14,LILRB1,PSMB10,SMCO4,SELL,PSMB8,HAPLN3,ISG15,GCH1,IL4I1,ISG20,FYB,SECTM1,PSTPIP2,IFITM3,PLAC8,IRF7,PLEKHO1,ATF5,IFI35,PRELID1,LY6E,SCIMP,KCNJ2,OAS3,SNX10,MVP,FCGR1A,APOL2,MYOF,ETV7,EPSTI1,RSAD2,SERPINA1,DTX3L,SAMD9L,CASP4,OAS2,PLEK,TMSB10,CD40,TRIM22,INHBA,FBXO6,MX1,SP110,RNF213,PSME1,TBC1D17,HLA-B,LCP1,TNFAIP2,IFI30,CBX6,CASP1,PIM1,TAP2,PIK3AP1,FCGR1B,TNFSF13B,P2RY6,S100A8,CNDP2,LGALS9,ERAP2,SH3BGRL3,MYD88,RNF19B,UCP2,EFHD2,LRRK2,NAPSB,LIMK2,RAB24,PRKCB,IFI44L,GBP3,LILRB2,APOL6,PSMA4,COTL1,HLA-A,TGM2,XAF1,HLA-F,GNB4,LYSMD2,JAK3,CD274,P2RX7,ATG3,SERPING1,FPR1,SQRDL,CD47,SLC2A6,NAGK,SDF2L1,DRAM1,CAMK2D,SRC,NAPA,CCR2,SLAMF8,CD38,TAPBP,FLOT2,NMI,MARCKSL1,ADAR,FLOT1,NCF1C,IFIH1,NCF1,DYNLT1,FN1,S100A9,CSF2RB,CYC1,FGR,SLC43A2,VASH1,BAZ1A,PFN1,UBE2F,ZYX,CFL1,CMKLR1,TMEM109,PML,KARS,PSMA2,EYA3,SIRPB1,CYBB,GABARAP,PSMA6,HCAR3,DENND1B,PARP10,PSMB3,PDIA3,NCF2,POMP,HMGA1,GBP1P1,HLA-C,STAT2,CD48,ARF3,FAM49B,JAK2,SP100,LILRA1,TNF,SZRD1,GRINA,PIM3,IL2RG,TNIP1,SLC25A37,CUL1,GLIPR2,DOCK8,MT2A,BID,ADGRE5,OAS1
Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing,32822576,Macrophages/3_PMID_32822576,Macrophage,CNOT6L,CCL5,ZFP36L2,SRSF6,FAM46C,DUSP4,CLEC2D,SARAF,TSC22D3,TMEM2,FYN,STK17B,OGT,FOXO1,IL7R,TSPYL1,ITM2A,CXCR4,HNRNPH1,ZC3HAV1,RELL1,PPP1CB,FOXP1,PIK3R1,ELMSAN1,CDC42SE2,ARRDC3,CD8A,PAN3,EIF4B,TLK1,UGCG,TOB1,PDCD4,LCK,BCL11B,IL32,SEPP1,IKZF3,TUBA4A,ICOS,RHOH,NR3C1,PTPRCAP,YPEL5,PPP1R16B,STK17A,PIP4K2A,EML4,SPOCK2,CD3D,JAK3,SERINC5,SLC38A1,CST7,MAF,CD96,REEP3,ELL2,ARL4C,UBE2B,TRA2A,PAFAH1B2,CLK1,CD2,SNHG16,PDE4D,WDR82,CDV3,C16orf54,RORA,AKNA,AXL,FKBP5,GSPT1,RNF19A,CCR6,EZR,RQCD1,CCR7,MRFAP1,NOP58,TMED4,C6orf62,FAM134C,SH2D1A,YWHAZ,ETS1,SYNE2,FNIP1,CAPZA1,UBE2G1,POLR3E,SNX9,SRSF2,RUNX3,CELF1,CD69,PPP2R5C,LBH,RAP2B,CD3G,BATF,ITK,STOM,CNIH1,SYTL3,RBM38,PRF1,YIPF5,SMCHD1,SLTM,EMB,RNF125,PTPN22,CREM,NPM1,KMT2E,RAB21,MGEA5,ARID4B,SRSF3,6-Mar,TFRC,PHYKPL,TSPYL2,TLE3,LEPROTL1,LDHB,HERPUD2,HERPUD1,IDI1,BTN3A1,THUMPD1,P2RY10,JMY,CD6,PTP4A1,ABCA1,CCNDBP1,SET,STK4,KAT6A,AMZ2,PRKCH,TMEM33,STAT4,PPM1K,PSME4,TERF2IP,TBL1XR1,AGO2,TSC22D1,SEPT1,SLA,C9orf78,KPNA4,GPR183,PSMD12,PARP8,COQ10B,CACUL1,KIAA0226,PDE3B,PIK3IP1,RAB27A,SLC25A3,PBXIP1,USP22,DDIT4,NKTR,CRKL,TP53INP2,XPO6,RBBP5,CD27,PLEKHA2,CBLB,TMF1,ATP2B4,AEBP2,FAM76A,RGS1,TMX4,MALAT1,PUM2,CYFIP2,TCP1,DDX6,IL2RG,ATP8A1,FAM118A,DUSP16,RNF168,DNAJC3,CCND2,ANKRD40,PER2,ABI1,SAR1A
Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing,32822576,Macrophages/4_PMID_32822576,Macrophage,STMN1,MKI67,HIST1H4C,HMGB2,TK1,HLA-DQB2,CENPF,TUBA1B,HMGN2,CDC20,TOP2A,UBE2C,AURKB,SPP1,CCNB1,KPNA2,BIRC5,S100B,CKS1B,TPX2,H2AFZ,HMGB1,NUSAP1,ASPM,CD1C,TUBA1C,SMC4,DTYMK,PRC1,IDH2,PTTG1,FCER1A,CENPE,PLK1,MCM7,KIAA0101,DDX39A,ASF1B,NAPSB,CKAP5,KIF22,CCNB2,TMEM106C,CEP55,GTSE1,RRM2,CDCA8,CDKN3,BUB1B,ZWINT,RAN,KIFC1,GGH,PHF19,PARP1,H2AFV,CDK1,CENPM,MAD2L1,MZT2B,NDC80,NDRG2,HMMR,ZFAND2A,NASP,ARL6IP1,SLC25A5,GSN,LDHB,SMC2,CORO1A,PSMC4,RNVU1-19,ACTG1,TACC3,RRM1,CCNA2,NCAPH,TYMS,LDHA,PRR11,SNRPB,CBR3,WDR34,YWHAH,CACYBP,APOBEC3B,ANP32E,MYBL2,HMGB3,VDAC3,ALOX5AP,NUCKS1,KIF4A,NCAPD2,PKMYT1,NCL,CASC5,TUBG1,LOC284454,HIST1H1C,TROAP,CCT3,SMC1A,BUB1,CKAP2,PLD4,LGALS1,NUDT1,PDLIM7,SAE1,LSP1,BUB3,PCNA,CLSPN,FEN1,CCNF,CALM2,ERP29,ENO1,TMPO,HSPD1,CKAP2L,ILF2,CDCA3,LMNB2,PA2G4,CDC25B,CDK2AP2,FAM111A,SNRNP25,SUSD3,RALY,NUF2,YWHAQ,SNRPE,CIT,RAD21,C19orf48,RANBP1,MCM5,MZT2A,HN1,KIF11,CCT7,RBBP7,BCAS2,EBP,HMGN1,DEK,RUVBL2,CTCF,RAD51AP1,PTPN7,PPP1CA,VAC14,RHEB,PTMA,PSMC3,AURKA,ACOT7,SKA2,ANP32B,AIP,KIF23,FAM111B,ANLN,CLDN1,UBE2S,RHNO1,ELP6,FDPS,CKLF,TUFM,UBTF,TPI1,RBMX,EIF6,MCM2,NUDC,TPGS2,PSMD7,TMEM14C,GOT2,UCP2,CENPN,SGOL2,YIF1B,DLGAP5,CKS2,NPM1,CENPW,NDUFS8,SGOL1,HADHA,CENPA,EIF5A,LSM4.00,SLC35A4,PPT1
Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing,32822576,T cell/0_PMID_32822576,T cell,LMNA,ANXA1,RGCC,GPR183,FOSB,FAU,MALAT1,CD52,MYADM,CCL5,VIM,MPZL3,AMICA1,TUBA1A,HSPH1,ID2,PFDN5,HSPA1A,CD44,HSP90AA1,TBCC,CRIP1,HSPD1,FTH1,AHNAK,IL7R,TPT1,HSPE1,CITED2,ITM2A,FXYD5,SERINC5,UBE2S,S100A10,CD8A,EGR1,GLTSCR2,GLIPR1,JUND,CD3D,HSPB1,ZC3HAV1,GADD45B,LOC284454,EIF1,FOS,TMSB4X,HCST,DDX3X,GNAS,CALM2,CCR7,C16orf54,RSRP1,S100A6,KLF6,LIME1,PABPC1,HEXIM1,PTMA,UBB,SOD2,KCNA3,GSTK1,H3F3B,GIGYF1,IDS,IER2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing,32822576,T cell/1_PMID_32822576,T cell,MAT2A,FKBP5,SMAP2,CCR6,GLUL,SC5D,SH3TC1,GSPT1,ZFP36L2,FYN,CD74,JMY,SNX9,ATP1B3,PLIN2,CTSB,HLA-DRA,MCL1,SOCS3,FOXO1,ETS1,IDI1,IL6ST,POR,SLC7A5P2,ARHGEF1,JUNB,ERAP2,CTLA4,SARAF,ZFP36,MAP2K1,RNF139,STAT5A,HLA-DRB1,P2RX5,YWHAQ,SFPQ,RNF19A,HLA-DPA1,NR1D2,SLC7A5,CXCR6,HERPUD1,GPR132,KPNA2,TNFSF8,YTHDF3,RBM38,HLA-DRB5,CTSH,SKIL,PIK3R1,LPAR2,TMEM173,KIAA1683,TMEM2,GPR171,CCR7,DDX3Y,ZC3H12A,PTGER4,SPOCK2,SLA,HBP1,NCK2,PSAP,CXCR4,DGKA,NR3C1,HCG18,DUSP4,HIAT1,NFKB1,FAM129A,SRGN,KIAA0319L,AKAP13,SRSF6,LAPTM5,TRAT1,CD6,PDE4B,AIM1,PTP4A1,IRS2,ZNF331,FAM102A,USP36,RANBP2,CYTH1,IL7R,TGIF1,ELL2,G3BP1,PSMD6-AS2,ALKBH5,RNF149,SELL,LEF1,EZR,STAT3,NFKBIZ,GLUD1,ZBTB1,OAT,PIM3,NUP98,RBPJ,SMARCA2,HLA-DQA1,INSIG1,TAP1,ZFAND5,ATXN1,CELF2,TRERF1,REV3L,SAMSN1,SLC16A3,PPP1R16B,STARD7,DCTN6,FURIN,SDCBP,SPTAN1,PNPLA2,MTHFD2,PDE3B,PPP2CA,BCL6,POLR3E,PDCD4,SIAH2,NAP1L4,CSRNP1,CSDE1,PNPLA8,TFDP2,NEAT1,PFKFB3,MALT1,ITGB1,EEF2,HECA,ICOS,MAN2A1,CDKN1B,FAM107B,TAP2,CSNK1D,CCSER2,FOSL2,LRP10,ST3GAL1,SMCHD1,SATB1,TOPORS,EHD1,COPB1,HNRNPK,HSPA5,RBL2,TC2N,C10orf54,UAP1,PAF1,SERINC1,PFKL,FBXO34,CEBPB,NFE2L2,SYT11,ARAP2,HIPK1,PLEKHB2,PLEKHG2,CDKN1A,AKIRIN1,BCL2L11,MAP3K2,AQP3,SLC2A3,GGA2,GORASP2,FLII,WSB1,SH2D1A,IPCEF1,NCDN,CREBBP,WNK1,CD4,TANK,CNOT6L,CNOT8,STK24,ATP6V0D1,HNRNPA0,COTL1
Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing,32822576,T cell/2_PMID_32822576,T cell,IFI44L,TNFRSF18,MX1,IL2RA,OAS1,TNFRSF4,XAF1,ISG15,IFI44,PMAIP1,HSPA1B,BATF,RGS1,IFI6,SAMD9L,STAT1,BIRC3,CD69,JUN,TYMP,TNFRSF9,IRF9,TNFSF10,LY6E,DUSP4,DTX3L,GBP5,DUSP1,TIGIT,EPSTI1,GBP1,SLAMF1,CASP1,LTB,PARP9,OAS3,ICOS,CD27,SIRPG,TBC1D4,PLSCR1,PIM2,CTLA4,CD82,ADAR,HSPA1A,GLCCI1,SP110,NT5C3A,TBC1D10C,IRF7,SPATS2L,MBOAT1,CTSC,SELL,DNAJB1,C17orf62,EIF2AK2,CARD16,TANK,ZNRF1,NAMPT,TNFRSF25,OASL,GADD45A,GBP4,PRDM1,SP100,FOXP3,RGS2,UBE2L6,TRAF1,CD83,DENND2D,CNIH1,VMP1,EAPP,BST2,DGKA,DEDD2,FOS,PHACTR2,SASH3,IL32,CTSA,GIMAP4,SAMD9,CACYBP,IFI35,CCM2,PARP14,MYD88,MX2,RHBDD2,UCP2,NFKBIZ,PPP1R15A,BAG3,NABP1,MAF,KIAA1551,VCPIP1,CD4,SAT1,GBP2,LIMS1,TIAM1,IGFLR1,SOD1,TRAF3IP3,FAS,GALM,GIMAP7,LOC105747689,STAT2,SDC4,GPR155,SDHD,CORO1B,LIMD2,CD28,PCED1B,PIK3IP1,RHOH,SQRDL,TAGAP,ARID5A,P2RY10,ZFP36L1,ADAM19,ARID5B,PPM1K,CD2,TTC39C,PHLDA1,DNPH1,FOXO1,CYTIP,TMEM173,SUSD3,AHR,RNF213,DNAJA1,IFITM1,JAK3,PPP1R2,APOL6,STK17B,GRAMD1A,PHF11,LAT,THAP5,TRIM38,GRSF1,IRF1,COPZ1,UBC,OCIAD2,POLD4,PSMB8,LDLRAD4,MLLT3,DDIT3,CLEC2D,ZC3H7A,GATA3,GLRX,FRMD4B,RAB11FIP1,SAMSN1,SYNGR2,TNFRSF14,CMTM6,KLF6,LGALS9,NINJ1,LCP2,FAM89B,PHTF2,AHSA1,MAT2B,NGRN,SIT1.00,IL6ST,TRAF3,TRIM22,N4BP1,DUSP10,EIF4A2,STAT3,ANKRD10,DOK2,PSTPIP1,IRF2,HSPB1,RBPJ,ODF2L,CHORDC1,NECAP2,TMC6
Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing,32822576,T cell/3_PMID_32822576,T cell,RRM2,STMN1,TK1,MKI67,MCM7,HIST1H4C,HLA-DRA,GNLY,ZWINT,HMGN2,ASF1B,FEN1,HMGB2,TUBA1B,BIRC5,KIAA0101,MCM5,AURKB,CLSPN,TYMS,MYBL2,PKMYT1,TMEM106C,KIFC1,IDH2,CDC20,PCNA,MCM3,ACTG1,UBE2C,TOP2A,NUSAP1,WDR34,HMGB1,CCNB2,KLRC1,CENPF,ENO1,TXLNA,SMC4,ACOT7,MCM2,GZMB,DDX39A,ANP32E,B3GNT7,MAD2L1,TPI1,CDK1,SMC2,SAE1,H2AFY,C19orf48,CCNB1,RANBP1,CKS1B,KIF22,RGS16,PDIA6,FDPS,NDC80,CCNA2,CDCA5,PRDX3,CDC45,PSME2,RAD51,SHMT2,YWHAH,GSTP1,DTYMK,PSMC3,TPX2,MCM4,BARD1,GGH,RBBP7,DUT,CENPM,CENPE,HLA-DRB5,ZNF683,GINS2,GMNN,ENTPD1,CYC1,RNASEH2A,ANP32B,PSMD14,TUBG1,CENPU,COTL1,ACAA2,RFC4,RFC2,MCM6,PAICS,MAD2L2,SET,SRP9,PSMB8,PGAM1,ATP5G3,DNAJC9,HLA-DRB1,PFN1,APOBEC3G,COX5A,PHB2,ASPM,FAM111B,GOLIM4,SLC25A5,HNRNPD,HLA-DMB,HAVCR2,NME1,TFDP1,PA2G4,TMPO,CD74,HIST1H1E,WARS,CKAP2L,ATP5A1,PSMD2,ANXA5,IFI30,LAT2,FABP5,SLC43A3,CDKN3,CASP2,CDT1,PKM,RRM1,SKA2,CCT8,CENPN,EZH2,CDC6,EWSR1,SRM,UQCRC1,CIT,SMC1A,LIG1,RAN,PSMA1,RQCD1,HSP90B1,SNRPB,MTHFD1,POLD2,UBE2T,PPP1CA,EBP,C1QBP,TRIM13,ARPC1B,EIF5A,FARSA,FAM111A,HIST1H1C,NONO,FKBP1A,CTSH,MCM10,CHAF1A,HNRNPA2B1,PSMA2,PSMB2,SNRNP25,KIF23,RCC2,CDCA8,PSMA4,DBNL,EXOSC9,TIMM13,ARPC5,PSMA6,NRM,VDAC1,YARS,PSMB3,CDCA3,ACAT2,FANCD2,CDC123,YWHAE,SRSF10,PPIF,RAB27A,SLC25A39,PSMD4,PPAP2A,PTTG1,RCC1,CCT5
Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing,32822576,T cell/4_PMID_32822576,T cell,SPON2,FGFBP2,PRF1,FCGR3A,GZMB,S1PR5,B3GNT7,GNLY,NKG7,FCER1G,PRSS23,GZMH,TYROBP,CST7,SH2D1B,CTSW,FCRL6,PLEK,FGR,CLIC3,CD247,KLRD1,KLRF1,CX3CR1,CD300A,AKR1C3,TTC38,HSH2D,ADGRG1,PLAC8,CCL4L2,ITGB2,KIR2DL3,AREG,IGFBP7,LITAF,HAVCR2,BPGM,ENC1,GTF3C1,ADRB2,ABI3,THEMIS2,APMAP,LYN,METRNL,TPST2,AKNA,UBE2F,RASSF1,RAB29,ZEB2,GK5,GZMM,GNG2,CHST12,TBX21,SLA2,P2RY8,EFHD2,SLC15A4,ITPRIP,TARP,SPN,RAP2B,LOC100130872,ARL4C,HOPX,SYTL3,GFOD1,MATK,PYHIN1,SIRT2,SYNE1,B4GALT1,ADD3,AOAH,TMEM71,C1orf21,GNPTAB,C12orf75,ITGAL,MAPK1,SELPLG,EBP,TNFRSF1B,PTPN4,BIN2,PTPRE,SORL1,MAP3K8,CDC42SE1,ADGRE5,CYBA,CCND3,SASH3,TGFBR3,DHRS3,MTSS1,AXIN1,KLRB1,OSTF1,ZCCHC17,ITGAX,BTN3A2,IL2RB,SAMD3,PXN,KLF3,PTPN12,JAK1,STK38,NR4A2,CCDC69,RIN3,PAPD5,DIP2A,NFE2L2,IFITM2,MAPRE2,UPP1,SIPA1,TES,PRKX,IER2,GZMA,FAM65B,SLAMF7,LINC00861,AES,RUNX3,PIK3R1,RHOC,CTSC,CD47,TMBIM1,ITGB7,ISG20L2,TFDP2,TMEM2,RASSF5,MYO1F,BID,IFNGR1,MBP,SLC9A3R1,FOSL2,ABHD17A,BHLHE40,RAP1B,GSTP1,SLFN13,NOL4L,NR4A3,HLA-E,CTSD,LPCAT1,CNOT2,CCL5,AUTS2,TERF1,CSNK1D,MOB3A,CMC1,CLEC2B,GPR65,CCL4L1,SIGIRR,RNF166,DSTN,SYNE2,CYP51A1,CALM1,IQGAP2,BRD7,TRAPPC10,IGF2R,CRBN,PHF20,CD53,ADAM10,ESYT2,PDIA3,HIPK2,SAR1A,LRMP,IRF1,ADAM8,CARD11,CREM,C1orf174,C20orf24,PSAP,INPP5D,CCNT1,HCST,PIP4K2A,SH2D2A,C5orf56,HLA-C
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,DC/C1_CLEC9A_PMID_32561858,Dendritic cell,SNX3,CLEC9A,C1orf54,CPNE3,NAAA,CPVL,XCR1,WDFY4,CADM1,IRF8,RAB7B,CLNK,DNASE1L3,RAB32,LGALS2,SHTN1,PPT1,IDO1,RGCC,BATF3,TAP1,HLA-DOB,CCND1,FUCA1,VAC14,RGS10,GYPC,TMEM14A,ID2,CYB5R3,SNX22,DBN1,FNBP1,PLCD1,ENSA,KIAA0226L,TACSTD2,ICAM3,SLAMF7,C1orf21,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,DC/C2_CLEC10A_PMID_32561858,Dendritic cell,CLEC10A,LYZ,FCGR2B,FCGR2A,MS4A7,SGK1,FCER1G,SERPINA1,S100A4,VSIG4,IFITM3,ANXA1,FPR1,CSTA,FPR3,LILRB3,MRC1,IL1R2,C1orf162,OLR1,CEBPD,CSF1R,TLR2,PLAUR,CD163,MAFB,HBEGF,TIMP1,ETS2,PLXDC2,RAB31,GLUL,MNDA,AIF1,MS4A6A,CD14,IFITM2,FCER1A,MT2A,LAPTM5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,DC/C3_CCR7_PMID_32561858,Dendritic cell,BIRC3,CCR7,MARCKSL1,FSCN1,LAMP3,TXN,CCL19,LAD1,RAB9A,NUB1,KIF2A,RASSF4,IL32,GPX4,GRSF1,TUBA1C,EBI3,NCCRP1,ANXA6,SLCO5A1,MARCKS,DAPP1,CFLAR,ZFAS1,TMEM176A,MGLL,NRP2,LY75,AOC1,CCL22,BASP1,ISCU,ERICH1,DUSP4,GPR157,LIMCH1,BTG1,GADD45A,TNFAIP2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,DC/C4_LILRA4_PMID_32561858,Dendritic cell,GZMB,IRF7,ITM2C,SEC61B,TCF4,LILRA4,CLIC3,SPCS1,MZB1,CXCR3,CCDC50,PPP1R14B,UGCG,TSPAN13,CLN8,DERL3,PLD4,C12orf75,C9orf142,APP,PTCRA,MAP1A,CYB561A3,SMPD3,PLAC8,SCT,IL3RA,IRF8,BCL11A,MAPKAPK2,CD164,PTGDS,FAM129C,LRRC26,RUBCN,IRF4,PLP2,FKBP2,SELL,TPM2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,DC/C5_CD207_PMID_32561858,Dendritic cell,LTB,IL22RA2,CD1A,LST1,S100B,VASP,NDRG2,PPM1N,CA2,SUSD3,HPGDS,PKIB,FCGBP,HLA-DQB2,ABI3,CD207,AIF1,PAK1,GNGT2,GSN,HCK,GDI2,CDH17,KCNMB1,ACTR3,SMAGP,RUNX3,TMEM14C,IL18,ARPC5,PARM1,TPI1,ARHGDIB,GPR82,C15orf48,TACSTD2,SPI1,PLEK2,RP11-597D13.8,PKM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,T-/NK-cell/C1_CD8_HAVCR2_PMID_32561858,T cell,CXCL13,GZMB,HAVCR2,CCL3,GNLY,LAG3,CCL4L2,IFNG,CD8A,GZMA,STMN1,RGS2,CTSW,CCL5,HSPA1A,AC092580.4,RBPJ,ISG15,ENTPD1,HLA-DRB1,HSPB1,IFI6,VCAM1,TIGIT,CD8B,RP11-291B21.2,GZMH,SIRPG,CCL4,PDCD1,ACP5,NKG7,KLRD1,MX1,CD63,TPI1,HLA-DRA,CD7,LY6E,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,T-/NK-cell/C2_CD8_GZMK_PMID_32561858,T cell,GZMK,CMC1,CST7,KLRG1,CLDND1,DUSP2,CD8B,LYAR,CCL4,CCL4L2,EOMES,CD8A,CRTAM,CCL5,GZMA,NKG7,ITM2C,SH2D1A,DTHD1,HLA-DPB1,CD74,GZMM,GIMAP4,RARRES3,GZMH,PIK3R1,CCL3L3,F2R,PTP4A2,TC2N,GIMAP7,SAMD3,HLA-DPA1,XCL2,STK17A,PLEK,TRAT1,PYHIN1,TRGC2,AOAH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,T-/NK-cell/C3_CD8_ZNF683_PMID_32561858,T cell,CD8B,CD8A,CCL5,ZNF683,KLRD1,GZMB,RP11-291B21.2,HOPX,CTSW,CD52,XCL1,CCL4,ITGA1,TRGC2,CD63,CD7,AC092580.4,ITM2C,KLRC1,JAML,GZMA,LAG3,XCL2,IL32,ALOX5AP,ID2,GZMH,ANKRD28,ANXA1,HCST,LGALS1,VIM,CKLF,KLRC2,CD69,CD3D,SPRY1,S100A4,CAPG,CXCR6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,T-/NK-cell/C4_CD8_CX3CR1_PMID_32561858,T cell,FGFBP2,GZMH,NKG7,GNLY,KLRD1,FCGR3A,PRF1,CST7,TRGC2,S1PR5,KLRG1,PLEK,CCL5,CCL4,KLRF1,FCRL6,CTSW,SPON2,PLAC8,C1orf21,LITAF,CMC1,LYAR,ADGRG1,ITGB2,ZEB2,PRSS23,KLF3,CX3CR1,FGR,GZMM,C12orf75,BIN2,MYO1F,PATL2,EFHD2,TTC38,FLNA,ADRB2,A2M-AS1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,T-/NK-cell/C5_CD4_CCR7_PMID_32561858,T cell,CCR7,SELL,IL7R,PABPC1,LEF1,FOS,MAL,LTB,GLTSCR2,EIF3E,JUNB,EEF2,TXNIP,GPR183,LDHB,TCF7,KLF2,SARAF,BIRC3,PLAC8,LDLRAP1,RP11-18H21.1,SOCS3,PASK,NOSIP,TMEM123,SERINC5,MYC,TRABD2A,FXYD5,CMTM8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,T-/NK-cell/C6_CD4_GZMA_PMID_32561858,T cell,CD40LG,ANXA1,ANKRD28,IL7R,RORA,RP11-138A9.1,VIM,S100A4,S100A10,S100A11,KLF6,TNFAIP3,RP11-138A9.2,LMNA,NFKBIA,TMEM173,CD69,EML4,ZFP36,CRIP1,FAM129A,ALOX5AP,GPR171,KLRB1,ADAM19,AC016831.7,FKBP11,GLUL,PTGER4,CTSH,CLU,ZFP36L2,MYADM,CD6,FRMD4B,ATP2B1,PERP,RBPJ,PLIN2,CREM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,T-/NK-cell/C7_CD4_CXCL13_PMID_32561858,T cell,CXCL13,ICA1,NR3C1,IL6ST,BTLA,SESN1,FKBP5,TSHZ2,NMB,SMCO4,RP5-1028K7.2,CPM,THADA,PCAT29,PASK,TNFRSF4,CD200,NUDT16,CYSLTR1,ITM2A,FBLN7,TOX2,FYB,C1orf228,CH25H,LINC01281,CHN1,SLA,METTL8,SESN3,NFKBIA,RNF19A,LIMS1,CD84,FBXO32,PGM2L1,BIRC3,CD40LG,KIAA0319L,LY96,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,T-/NK-cell/C8_CD4_FOXP3_PMID_32561858,T cell,TNFRSF4,IL2RA,LTB,TNFRSF18,RTKN2,AC133644.2,FOXP3,BATF,TBC1D4,CTLA4,IL32,TIGIT,PMAIP1,UGP2,ICOS,AC017002.1,CD27,SAT1,ICA1,PIM2,MIR4435-2HG,MAGEH1,IL1R2,DNPH1,TNFRSF1B,CORO1B,BIRC3,CARD16,GADD45A,LAIR2,ARID5B,S100A4,FANK1,IKZF2,TRAC,F5,CUL9,RP11-1399P15.1,CTSC,SPOCK2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,T-/NK-cell/C9_NK_FGFBP2_PMID_32561858,NK cell,FGFBP2,SPON2,PTGDS,FCGR3A,KLRF1,TYROBP,FCER1G,PRF1,PLAC8,NKG7,CLIC3,GNLY,KLRD1,AREG,CCL3,IGFBP7,CST7,S1PR5,CD247,CMC1,AKR1C3,ITGB2,TTC38,EFHD2,PLEK,GZMB,ADGRG1,PRSS23,CTSW,CX3CR1,KLRB1,HOPX,APMAP,NCR3,TXK,FGR,BIN2,C1orf21,LITAF,CCL4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,T-/NK-cell/C10_NK_XCL1_PMID_32561858,NK cell,AREG,KLRC1,TRDC,TYROBP,XCL1,FCER1G,XCL2,GNLY,KRT81,KRT86,TMIGD2,KLRD1,CD7,KIR2DL4,TXK,CTSW,MATK,LINC00996,CD63,HOPX,TNFRSF18,KLRB1,LAT2,CD160,ADGRG3,IL2RB,SH2D1B,KLRC2,NKG7,GSTP1,CLIC3,CXXC5,CAPN12,GZMA,KLRF1,ID2,CCL5,SPRY1,MCTP2,NCAM1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,B-cell/C1_CD27-/IGHD+_PMID_32561858,B cell,TCL1A,IGHD,FCER2,CD72,CD52,CD79A,IL4R,CD79B,BTG1,HLA-DRB1,HLA-DRA,HLA-DPA1,CD37,HLA-DPB1,LAPTM5,GLTSCR2,CD200,HLA-DQB1,HLA-DQA1,HLA-DMB,HVCN1,CXCR4,HLA-DMA,NCF1,CD22,YBX3,BTLA,ZBTB16,MS4A1,STAG3,SESN1,CLEC2D,CD69,PFDN5,SELL,LINC00926,C1orf162,RHOH,FOXP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,B-cell/C2_CD27+/IGHM+_PMID_32561858,B cell,CD69,CXCR4,BTG1,JUNB,CD37,H3F3B,HLA-DRA,NR4A2,GPR183,AC079767.4,CD52,TXNIP,CD83,ARHGAP24,MS4A1,VPREB3,TOMM7,HLA-A,HLA-DPB1,HLA-DRB1,CCR7,RGS2,LTB,FCMR,GLTSCR2,DDX5,FOXP1,LAPTM5,ZFAS1,BANK1,SRSF5,HLA-DQB1,1-Mar,REL,HLA-DPA1,TGIF1,SAT1,LY9,SMIM14,TCF4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,B-cell/C3_CD27+/IGHM-_PMID_32561858,B cell,HLA-DPB1,LTB,HLA-DRA,CD74,HLA-DPA1,LAPTM5,CD52,HLA-DRB1,HLA-DQB1,MS4A1,HLA-DQA1,HLA-A,CXCR4,HLA-E,CD37,MYL12A,RP5-887A10.1,BANK1,TOMM7,BTG1,ACTG1,ARHGDIB,LY86,NAP1L1,ARL6IP5,CORO1A,CD53,CD99,SELL,OAZ1,CFL1,CALM2,COTL1,SH3BGRL3,BTF3,ARPC1B,HLA-DMB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,B-cell/C4_CD27+/CD38+_PMID_32561858,B cell,MARCKSL1,ACTG1,HMGN1,H3F3A,RGS13,PFN1,SERF2,CFL1,CORO1A,ARPC2,SLC25A5,ATP5L,HNRNPA1,LRMP,SERPINA9,TCL1A,ANP32B,HMGA1,HMCES,HMGB1,PPIA,HMGN2,BASP1,ACTR3,BCL7A,LCP1,RFTN1,PRDX1,ARPC3,LIMD2,NEIL1,UCP2,RP11-231C14.7,NPM1,HLA-DQA1,ARPC1B,MS4A1,RAN,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,B-cell/C5_IGHG1+/PRDM1high_PMID_32561858,B cell,XBP1,MZB1,IGHG3,IGHG1,JSRP1,IGHG4,IGHG2,PECAM1,SSR4,NEAT1,FKBP11,PRDX4,CPEB4,FAM92B,IGHGP,RRBP1,FKBP2,CD38,RP11-16E12.2,PTP4A3,LMAN1,BRSK1,PIM2,SPCS3,SDC1,ITM2C,HIST1H1C,DERL3,SEL1L,PDK1,IGLV3-1,CADM1,SPAG4,CCND2,ERLEC1,ZBP1,HSP90B1,GAS6,CEP128,CAV1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,B-cell/C6_IGHG1+/PRDM1low_PMID_32561858,B cell,IGHGP,IGHG1,IGHG3,IGHG4,IGHG2,MZB1,SSR4,XBP1,FKBP11,PRDX4,DERL3,IGLV3-1,FKBP2,CD59,SEC11C,IGKV1-12,ITM2C,IGLC3,IGLC2,MT2A,SPCS3,SPAG4,JSRP1,ERLEC1,CD63,CST3,CTSD,IFITM3,S100A9,SDC1,CADM1,NUCB2,GNLY,IGKV4-1,IL32,IGLC7,NKG7,IFI6,APOC1,IGKV1-5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,B-cell/C7_IGHA1+/PRDM1high_PMID_32561858,B cell,IGHA2,JCHAIN,IGHA1,SSR4,TNFRSF17,ANKRD28,HSP90B1,AL928768.3,MZB1,PRDM1,RRBP1,VIMP,PDIA4,SDF2L1,PABPC4,HIST1H2BG,JUN,CCR10,SPCS2,TRIB1,PDK1,CREB3L2,ABCB9,XBP1,DERL3,UBE2J1,ERN1,FKBP2,DNAJC3,FKBP11,DNAJB9,FNDC3A,TNFRSF18,PHGR1,SLAMF7,SSR3,RNU12,CCPG1,MANF,HERPUD1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,B-cell/C8_IGHA1+/PRDM1low_PMID_32561858,B cell,IGHA1,IGHA2,JCHAIN,MZB1,DERL3,SSR4,AL928768.3,FKBP11,FKBP2,XBP1,HSP90B1,PRDX4,SEC11C,HERPUD1,TNFRSF17,IGLC3,SSR3,ITM2C,SDF2L1,MANF,H1FX,TIMP1,SPCS3,RPN1,HSPA5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Myeloid/C1_CD14_PMID_32561858,Monocyte,S100A12,S100A8,S100A9,VCAN,FCN1,THBS1,AREG,RP11-1143G9.4,EREG,NAMPT,IL1B,CFP,SELL,MNDA,CD55,DUSP1,CSTA,SAMSN1,CLEC4E,AP1S2,STK17B,IRS2,GCA,METTL9,RGS2,FAM65B,CSF3R,TNFAIP3,HMGB2,MEGF9,SOCS3,SLC2A3,RBP7,IRAK3,FPR1,CORO1A,IER2,CD300E,NFKBIZ,PTPRE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Myeloid/C2_CD16_PMID_32561858,Monocyte,IFITM2,LST1,LINC01272,LILRA5,NAP1L1,CORO1A,COTL1,LILRB2,CYTIP,NAAA,CFP,LIMD2,FCGR3A,CD48,RHOC,PAG1,C10orf54,CDKN1C,FAM65B,STXBP2,LYST,TESC,FCN1,LRRC25,PTPRC,SLC25A6,POU2F2,ICAM2,C19orf38,LILRA1,LYPD2,GMFG,ARHGDIB,FAM110A,BIN2,CD52,ICAM3,ABI3,MTSS1,PTPN6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Myeloid/C3_CCR2_PMID_32561858,Macrophage,CLEC10A,PPA1,FCN1,LGALS2,C10orf54,CCR2,GPR183,FAM26F,FGL2,CORO1A,LIMD2,CD1E,MARCKSL1,ANKRD22,CTSH,IDO1,HLA-DQB1,CD1D,AREG,BTG1,HCST,CD1C,PID1,RGS2,HRH2,COTL1,AOAH,JUNB,RGS10,HLA-DQA1,PSTPIP2,CXCR4,ITGB2,TPI1,SERPINB9,FCGR2B,CST6,CLEC5A,LAP3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Myeloid/C4_CCL2_PMID_32561858,Macrophage,LMNA,EMP1,EMP3,RGCC,ANXA2,ANKRD28,FLNA,ADGRE5,ANPEP,IL3RA,TYMP,FBP1,ANXA1,MMP19,LRRFIP1,EZR,MYADM,CD44,CALM1,C15orf48,LGALS3,GLIPR2,MRC1,PDXK,ATP6V1F,SGK1,CRIP1,ANXA5,FABP5,OLR1,GSTO1,UPP1,CLEC5A,CCL2,ALCAM,ENO1,PHLDA1,PTGER2,LIMS1,KCNN4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Myeloid/C5_CCL18_PMID_32561858,Macrophage,RNASE1,APOE,CCL13,LGMN,GPNMB,PLTP,CTSL,SPP1,NUPR1,CTSD,CTSZ,SEPP1,PLD3,MARCKS,ARL4C,PLA2G7,SDS,LIPA,CREG1,NPL,APOC1,KCNMA1,ABCA1,MS4A4A,RARRES1,TMEM176A,FOLR2,C1QC,SMPDL3A,TMEM37,RGS1,CD84,PMP22,TMEM176B,OTOA,SDC3,C1QA,SLC40A1,A2M,C1QB,TCN2,LILRB4,FPR3,CD59,C2,MERTK,TREM2,CCL18,TMIGD3,IL2RA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Myeloid/C6_MMP9_PMID_32561858,Macrophage,MMP9,SPP1,MATK,RP11-20G13.3,IL1RN,C15orf48,SDC2,HSPH1,MMP7,MMP12,HSP90AA1,LDHA,SLC7A11,PKM,PDLIM4,MREG,SLAMF9,ENO1,SCG5,CCL22,TM4SF19,TNFSF14,CA2,CLEC5A,PGAM1,HSPD1,RP11-184M15.1,CYP27B1,MSANTD3,SPHK1,FABP5,CHI3L1,MFSD12,BNIP3,ZMIZ1-AS1,MIF,BCAT1,AK4,NRIP3,SERPINE1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Myeloid/C7_CX3CR1_PMID_32561858,Macrophage,RGS1,FCGBP,C3,HERPUD1,GPR34,LPAR6,PLD4,C1QC,ADAM28,CX3CR1,OLFML3,RGS10,RNASET2,ADAP2,CSF1R,CD14,C1QB,PKIB,HLA-DMB,MS4A6A,XIST,COL1A1,TMEM176B,KCNMB1,HLA-DQB1,C10orf54,MEF2C,ADORA3,ETV5,CADM1,TREM2,S100B,NDRG2,RB1,C1QA,CCL3,RASSF4,COL1A2,GAL3ST4,RNASE6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Myeloid/C8_PPARG_PMID_32561858,Macrophage,FABP4,CES1,MCEMP1,GCHFR,CD52,MARCO,ALDH2,RBP4,PDLIM1,INHBA,RGCC,LGALS3,ALOX5AP,SERPINA1,AKR1C3,RETN,MGST1,UBB,CD9,PHLDA3,S100A13,PLA2G16,APOC1,SERPING1,TREM1,AGRP,ACP5,GLRX,MSR1,PPARG,LTA4H,LPL,FBP1,CYP27A1,RMDN3,CRIP1,MGST3,OLR1,RP11-598F7.3,PCOLCE2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Myeloid/C9_LYVE1_PMID_32561858,Macrophage,LYVE1,SEPP1,FOLR2,RNASE1,PDK4,F13A1,MAF,PLTP,STAB1,CFD,C1QC,C1QA,LILRB5,DAB2,MS4A4A,SLC40A1,MAMDC2,FCGRT,LGMN,C1QB,CD163,EGFL7,BLVRB,MAN1A1,MGP,MS4A6A,KLF2,A2M,GPR34,FOSB,CD14,LTC4S,APOD,DCN,GAS6,EMB,GYPC,COLEC12,CSF1R,TSPAN4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Myeloid/C10_FCGR3B_PMID_32561858,Neutrophil,CXCL8,BCL2A1,SOD2,NAMPT,G0S2,IL1B,PLEK,HCAR3,IVNS1ABP,HCAR2,PTGS2,CYSTM1,CCL3L3,IFITM2,CCL4L2,RHOH,IL1RN,PPIF,GK,SLC25A37,CSF3R,CCL4,IER3,CXCL1,FCGR3B,AQP9,CCL3,OSM,SOCS3,C15orf48,LINC00152,MXD1,PDE4B,EHD1,ZNF267,TNFAIP3,ADM,LCP2,S100P,CD69,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Mast cell/C1_CPA3_PMID_32561858,Mast cell,TESPA1,CPA3,CNRIP1,SLC45A3,GRAP2,TXNIP,RICTOR,HMGB2,DDX46,TPP1,SWAP70,TALDO1,TOP1,OAZ2,SLC26A2,HSPA1B,GABPB1-AS1,GPR183,DCTN3,BTG1,RGS1,SERBP1,FUS,NUDT14,HCLS1,SRSF7,HNRNPA2B1,FAM46A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A pan-cancer blueprint of the heterogeneous tumor microenvironment revealed by single-cell profiling,32561858,Mast cell/C3_ICAM1_PMID_32561858,Mast cell,NFKBIA,LMNA,BIRC3,BATF,REL,ICAM1,BCL2A1,ANXA1,PTGS2,TNFAIP3,NAMPT,SDCBP,FDX1,EHD1,NFKB1,PIM1,CREM,MT2A,RELB,CRIP1,AREG,ID2,HILPDA,EMP3,NINJ1,GADD45B,MCL1,CD83,THAP2,SOCS3,KDM6B,FAM107B,PLK3,IL13,HAMP,RNF145,MYADM,RGCC,PIM3,IL2RA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,Neutrophils_PMID_31033233,Neutrophil,CSF3R,CYP4F3,VNN3,FPRL1,KCNJ15,MME,IL8RA,IL8RB,FCGR3B,DYSF,FCAR,CEACAM3,HIST1H2BC,HPSE,CPPED1,CREB5,S100A12,TNFRSF10C,SLC22A4,TECPR2,SLC25A37,BST1,CRISPLD2,G0S2,SIGLEC5,CD93,MGAM,ALPL,FPR1,PDE4B,LILRB2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,Monocyte_PMID_31033233,Monocyte,CD14,LAIR2,G0S2,VCAN,ASAH1,GNLY,S100A8,APOBEC3A,CTSW,S100A9,TSPAN14,NAMPT,FCN1,LIPA,NEAT1,IL2RB,ITGAM,CSF3R,DAG1,FCGR3A,HLA-DRA,FCGR1A,FCGA1B,FCGR1C,FCGR1B,CD33,CD300E,CD300LF,CD300LB,CXCR5,DOK1,CSF2RA,PLAUR,TREM1,ERBB2,LYZ,IL1B,NFKBIA,FOSB,KLF6,SAMHD1,SOD2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,Macrophages_PMID_31033233,Macrophage,MARCO,CXCL5,SCG5,SULT1C2,MSR1,CTSK,PTGDS,COLEC12,GPC4,PCOLCE2,CHIT1,KAL1,CLEC5A,ME1,DNASE2B,CCL7,FN1,CD163,GM2A,SCARB2,BCAT1,RAI14,COL8A2,APOE,CHI3L1,ATG7,CD84,FDX1,MS4A4A,SGMS1,EMP1,CYBB,CD68,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,Dendritic cells_PMID_31033233,Dendritic cell,CD209,CCL17,HSD11B1,CCL13,CCL22,PPFIBP2,NPR1,CD1B,VASH1,F13A1,CD1E,MMP12,FABP4,CLEC10A,SYT17,MS4A6A,CTNS,GUCA1A,CARD9,ABCG2,CD1A,PPARG,RAP1GAP,SLC7A8,GSTT1,PDXK,FZD2,CSF1R,HS3ST2,CH25H,LMAN2L,SLC26A6,BLVRB,NUDT9,PREP,TM7SF4,TACSTD2,CD1C,CCL1,EBI3,INDO,LAMP3,OAS3,IL3RA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,NK cells_PMID_31033233,NK cell,LOC643313,GAGE2,ZNF747,XCL1,XCL2,AF107846,SLC30A5,SGMS1,MCM3AP,TBXA2R,CDC5L,LOC730096,FUT5,FGF18,MRC2,RP5-886K2.1,SPN,PSMD4,PRX,FZR1,ZNF205,AL080130,ZNF528,MAPRE3,BCL2,NM_017616,ARL6IP2,PDLIM4,TRPV6,LDB3,ADARB1,SMEK1,TCTN2,TINAGL1,IGFBP5,ALDH1B1,NCR1,KIR3DL2,SPON2,KIR2DL3,GZMB,KIR3DS1,KIR3DL1,TCC38,PMEPA1,IL21R,KIR3DL3,KIR2DS5,KIR2DS2,GTF3C1,KIR2DS1,S1PR5,DUSP4,RRAD,PLA2G6,NIBP,FOXJ1,43165,MADD,LPCAT4,MPPED1,MUC3B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,B cells_PMID_31033233,B cell,MS4A1,TCL1A,HLA-DOB,PNOC,KIAA0125,CD19,CR2,IGHG1,FCRL2,BLK,COCH,OSBPL10,IGHA1,TNFRSF17,ABCB4,BLNK,GLDC,MEF2C,IGHM,FAM30A,SPIB,BCL11A,GNG7,IGKC,CD72,MICAL3,BACH2,IGL,CCR9,QRSL1,DTNB,HLA-DQA1,SCN3A,SLC15A2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,other T cells_PMID_31033233,T cell,PRKCQ,CD3D,CD3G,CD28,LCK,TRAT1,BCL11B,CD2,TRBC1,TRAC,ITM2A,SH2D1A,CD6,CD96,NCALD,GIMAP5,TRA,CD3E,SKAP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,T helper cells_PMID_31033233,T cell,ICOS,LRBA,ITM2A,FAM111A,PHF10,NUP107,SEC24C,NAP1L4,BATF,ASF1A,FRYL,FUSIP1,YME1L1,TRA,RPA1,UBE2L3,ANP32B,DDX50,C13orf34,PPP2R5C,SLC25A12,ATF2,CD28,GOLGA8A,IFNG,LTA,APBB2,DOK5,IL12RB2,APOD,ZBTB32,CD38,CSF2,CTLA4,CD70,DPP4,EGFL6,BST2,DUSP5,LRP8,IL22,DGKI,CCL4,GGT1,LRRN3,SYNGR3,ATP9A,BTG3,CMAH,HBEGF,SGCB,PMCH,AHI1,PTGIS,CXCR6,EVI5,IL26,MB,NEIL3,GSTA4,PHEX,SMAD2,CENPF,ANK1,ADCY1,LOC728210,LAIR2,SNRPD1,MICAL2,DHFR,WDHD1,BIRC5,SLC39A14,HELLS,LIMA1,CDC25C,CDC7,GATA3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,CD8 T cells_PMID_31033233,T cell,CD8B,CD8A,PF4,PRR5,SF1,LIME1,DNAJB1,ARHGAP8,GZMM,SLC16A7,SFRS7,APBA2,C4orf15,LEPROTL1,ZFP36L2,GADD45A,MYST3,ZEB1,ZNF609,C12orf47,THUMPD1,VAMP2,ZNF91,ZNF22,TMC6,FLT3LG,CDKN2AIP,TSC22D3,TBCC,RBM3,ABT1,C19orf6,CAMLG,PPP1R2,AES,KLF9,PRF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,Cytotoxic cells_PMID_31033233,T cell,KLRD1,KLRF1,GNLY,CTSW,KLRB1,KLRK1,NKG7,GZMH,SIGIRR,ZBTB16,RUNX3,APOL3,RORA,APBA2,WHDC1L1,DUSP2,GZMA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,MDSC_PMID_31033233,Monocyte,HLA-DRA,CD14,FUT4,FCGR3A,FCGR3B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,M1 Macrophages_PMID_31033233,Macrophage,CCR7,NOS2,CD40,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq,31033233,M2 Macrophages_PMID_31033233,Macrophage,MRC1,ARG1,CD163,PPARG,IFNB2,TREM2,CD204,CD206,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Memory CD4+  T_PMID_33571124,T cell,ANXA1,S100A4,CCR6,LTB,GPR183,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Effector CD4+  T_PMID_33571124,T cell,CD40LG,GZMA,GZMH,CXCR3,CXCR6,MHCII,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Naive CD4+  T_PMID_33571124,T cell,SELL,CCR7,LEF1,TCF7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Suppressive Regulator T_PMID_33571124,T cell,TNFRSF4,IL2RA,FOXP3,SELL,CTLA4,IKZF2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Exhausted CD4+  T_PMID_33571124,T cell,CXCL13,ICA1,TIGIT,TNFRSF4,BTLA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,GZMK+  Effector CD8+  T_PMID_33571124,T cell,GZMK,CCL4,CST7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"ZNF683+  Effector CD8+
T_PMID_33571124",T cell,ZNF683,CCL5,HOPX,KLRC1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Exhausted CD8+  T_PMID_33571124,T cell,CXCL13,TIGIT,HAVCR2,LAG3,IFI6,IFNG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"CX3CR1+  Effector CD8+
T_PMID_33571124",T cell,NKG7,GNLY,FGFBP2,PRF1,CX3CR1,GZMH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Exhausted CD8+  T_PMID_33571124,T cell,STMN1,KIAA0101,TIGIT,CXCL13,IFNG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,CD3-CD56dimCD16+ NK_PMID_33571124,NK cell,FCGR3A,FGFBP2,CX3CR1,NKG7,TYROBP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,CD3-CD56brightCD16- NK_PMID_33571124,NK cell,XCL1,XCL2,TYROBP,FCER1G,TRDC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Alveolar resident
Macrophage_PMID_33571124",Macrophage,MRC1,S100A6,EMP1,EMP3,SH3BGRL3,PPARG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Alveolar resident
Macrophage_PMID_33571124",Macrophage,SCD,RBP4,IL17RB,CAMP,GCHFR,PPARG,FABP4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Alveolar resident
Macrophage_PMID_33571124",Macrophage,CES1,FABP4,SLC19A3,PPARG,INHBA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Perivascular resident
Macrophage_PMID_33571124",Macrophage,LYVE1,LILRB5,SEPP1,FOLR2,SLC40A1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Anti-inflammatory
macrophages_PMID_33571124",Macrophage,MMP7,TIMP3,PLA2G7,CHI3L1,CTSB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Anti-inflammatory
macrophages_PMID_33571124",Macrophage,TNF,ADAMDEC1,HS3ST1,RGS1,C3,AXL,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Tumor-associated
Macrophage_PMID_33571124",Macrophage,SPP1,SLAMF9,LDHA,VEGFA,SLC2A3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Proliferating Macrophage_PMID_33571124,Macrophage,STMN1,H2AFZ,TUBA1B,PCNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Early-stage Macrophage_PMID_33571124,Macrophage,CXCL10,GBP1,CXCL9,CXCL11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Classical CD14+
Monocyte_PMID_33571124",Monocyte,CD14,FCN1,S100A12,VCAN,SERPINB2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Non-classical CD16+
Monocyte_PMID_33571124",Monocyte,FCGR3A,CDKN1C,POU2F2,ZNF703,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Monocytes Derived DC_PMID_33571124,Dendritic cell,CD14,FCGR2B,CCL17,CLEC10A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Conventional Dendritic
cell type 1_PMID_33571124",Dendritic cell,CLEC9A,BATF3,IRF8,CPVL,CADM1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Conventional Dendritic
cell type 2_PMID_33571124",Dendritic cell,CD1C,FCER1A,FCGBP,CD1A,CD207,HLA-DQB2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Migratory Conventional
Dendritic cell_PMID_33571124",Dendritic cell,FSCN1,CCR7,LAMP3,CCL19,CCL22,CD40,BIRC3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Plasmacytoid Dendritic
cell_PMID_33571124",Dendritic cell,IRF4,LILRA4,TCF4,MZB1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Granulocyte_PMID_33571124,Neutrophil,G0S2,FCGR3B,S100A8,S100A9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Memory B cell_PMID_33571124,B cell,MS4A1,CD27,LTB,GPR183,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Naïve B cell_PMID_33571124,B cell,MS4A1,IGHD,FCER2,CXCR4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,MALT B cell_PMID_33571124,B cell,JCHAIN,IGHA1,IGHA2,IGHM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Germinal center B cell_PMID_33571124,B cell,NEIL1,TCL1A,RGS13,RFTN1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Plasma IgG mature cell_PMID_33571124,B cell,MZB1,IGHG1,IGHG2,IGHGP,XBP1,PRDM1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,"Plasma IgG immature
cell_PMID_33571124",B cell,MZB1,IGHG1,IGHG2,IGHG4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Decoding the multicellular ecosystem of lung adenocarcinoma manifested as pulmonary subsolid nodules by single-cell RNA sequencing,33571124,Proliferating B cell_PMID_33571124,B cell,STMN1,MKI67,PCNA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD4-C1-CD69_PMID_31588021,T cell,FOS,FOSB,PLCG2,JUN,KLRB1,HBB,IGFBP7,HEXIM1,HBA2,CD69,LTB,KLF6,TLE4,TSC22D3,IL7R,NHSL2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD4-C2-ANXA1_PMID_31588021,T cell,HSPA6,BAG3,HSPA1A,HSPA1B,HSPE1,DNAJB1,HSPB1,IGHA1,HSPD1,BIRC3,HSPH1,HSP90AA1,HSPA8,AHSA1,CDKN1A,PIK3R3,SAMSN1,CACYBP,DNAJA1,ZFP36L2,CKS2,DEDD2,IFITM1,UBC,THUMPD3-AS1,HSP90AB1,ANXA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD4-C3-CD27_PMID_31588021,T cell,IGHG3,IGKC,IGHG4,IGLC2,IGHG1,GPR183,RNF19A,MT1E,PIK3R1,CREM,IGLC3,NCL,GPBP1,PTPRC,REL,ELF1,DDX24,GPR65,NR3C1,MT1X,TNFRSF1B,MBP,SYNE2,SYAP1,ITGA4,PDE4D,S1PR4,ANKRD37,PMAIP1,ZMAT2,ANKRD11,FNBP1,EIF3A,ARGLU1,USP36,AKAP13,UBE2B,YTHDC1,ZNF331,PRPF4B,CAST,BDP1,LEPROTL1,PRPF38B,ADAR,SAMSN1,PLEKHA2,MT2A,ARL4C,SYTL3,PPM1G,TPR,G3BP2,DYNLT1,TNFAIP8,TMEM2,PTGES3,DDX17,ARID5B,RGS2,ARID4B,SERBP1,PRRC2C,GSPT1,H3F3B,CDKN1B,FAM177A1,RAN,MTDH,PHF20L1,UBXN4,TPM3,STAT1,IL7R,CNOT6L,RAB11FIP1,PDE4B,MOB4,FTH1,FAM107B,ITGB1,RORA,GNG2,ITM2A,ZNHIT3,CHD1,LRRFIP1,ATF7IP,VPS37B,RNF125,EMB,SRRM2,DDX27,THRAP3,IKZF3,FNBP4,RAB2A,RSL24D1,DUSP4,WHSC1L1,TPM4,CSNK1D,CEBPZ,IL2RG,SRSF3,SLA,HSPD1,CHD4,LMNA,JMJD1C,SMCHD1,PAFAH1B1,NFE2L2,PPP1R10,SOD1,SKIL,DDX21,SPTY2D1,RBM25,FKBP4,JAK1,SCAF11,STIP1,RNF7,SELK,MRFAP1,EZR,ADD3,IK,TERF2IP,STAT4,CD27,C12orf75,PARP1,PAPOLA,ZFAND2A,TUBA4A,PAK2,PTPN22,ZFP36,STAT3,ATP2B1,TAX1BP1,HP1BP3,MECP2,CHORDC1,SAFB2,TCEA1,NUDC,HNRNPU,CYTIP,SMG1,FOSL2,RSL1D1,CALM1,PPHLN1,CD55,SDCBP,YWHAZ,BCL11B,BIRC3,EPC1,RSRC2,VDAC1,EML4,HNRNPAB,RAP1B,FGFR1OP2,PSMB1,OSBPL8,NOL7,YWHAE,CMTM6,FYN,SRSF6,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD4-C4-CTLA4_PMID_31588021,T cell,TNFRSF4,TNFRSF18,CTLA4,AC133644.2,IL2RA,BATF,CD74,HLA-DRB1,PKM,TIGIT,LTB,DNPH1,ARID5B,TYMP,ICOS,MIR4435-2HG,RBPJ,UCP2,FOXP3,ISG20,HSPB1,PMAIP1,GLRX,PIM2,HLA-DQA1,CORO1B,PHLDA1,SH2D2A,TBC1D4,IFI6,ATOX1,SAT1,GBP4,GBP2,HLA-A,CNIH1,HLA-DPA1,ENTPD1,PGAM1,CD83,CTSC,HLA-DRA,AKIRIN2,TNFRSF25,RAB11FIP1,CARD16,CD27,DNAJB4,HSPE1,TMEM173,RHBDD2,NDFIP2,DUSP4,LINC00152,LSP1,SELL,SPOCK2,SFT2D1,IL32,TRAC,DUSP2,ALDOA,CLEC2D,GPX1,COMMD3,CACYBP,PARK7,NOP10,SOD1,BIRC3,BAG3,NAMPT,OAZ1,TMEM134,DEDD2,RAP1A,ENO1,RGS10,CD82,COX5A,CTSA,HLA-DMA,HLA-G,RGS2,HSPA9,TAP1,CHST11,HLA-E,TMCO1,IL2RG,SRGN,CCNDBP1,POLR3GL,RGS1,NDUFA13,LIMD2,FAM107B,PPP1R7,CCM2,CALM3,PFN1,CD59,EVI2A,ATPIF1,POU2F2,GABPB1-AS1,GABPB1,ARF5,ISCU,SCAND1,PRNP,TNFRSF1B,HLA-DQB1,RAB10,SNAP23,GADD45A,CDC37,DESI1,ATP5A1,SNHG7,PSMB8,FRMD4B,RHOG,PRR13,SH3KBP1,PMVK,SAMSN1,TIMM8B,NONO,LIMS1,CIRBP,GATA3,UBC,PSMA5,TANK,LGALS1,EMC7,HMGA1,ORMDL2,UBE2B,UGP2,PIM3,COPE,CD2,TNFSF14,ARHGDIB,FKBP1A,BST2,HSPA8,CD7,TPI1,SKAP1,PSMB3,GTF3C6,SH3BGRL,SEPT6,MAP2K3,GNG5,CFLAR,ANXA5,ARPC1B,RHOA,IFI35,MVP,TRAF3IP3,SLC3A2,CCT8,HLA-DPB1,PSMB7,HSPA1A,NDUFA11,TNFSF10,POLR2K,CREM,MSI2,GNG2,S100A4,C14orf166,RPA3,ARF1,COTL1,CD37,NDUFAB1,SNRPG,JTB,TMBIM4,SEC11C,COPZ1,PPP1R2,ORMDL1,ARHGAP9,NDUFAF3,HSP90AB1,HSPD1,S100A6,GSTO1,COX8A,CD2BP2,WTAP,RER1
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD8-C1-GZMK_PMID_31588021,T cell,CCL4,NKG7,KLRD1,GZMH,CST7,GZMK,CCL5,CTSW,GZMA,GZMM,CD8A,AC092580.4,HCST,CD8B,HBA2,HBB,ID2,INTS6,CXCR4,IFNG,IER2,BRD2,CD63,RP11-347P5.1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD4-C5-GZMA/CD8-C2-GZMA_PMID_31588021,T cell,STMN1,HMGB2,HIST1H4C,MKI67,CCL3,KIAA0101,HMGN2,NUSAP1,TUBA1B,HLA-DRA,CENPF,GZMB,H2AFZ,PTTG1,FABP5,HLA-DRB1,HMGB1,DUT,UBE2C,TYMS,CKS1B,TOP2A,RANBP1,TMPO,SMC4,PCNA,CALM3,ANP32B,CDK1,ASPM,H2AFV,DEK,PSMA4,MT2A,RAN,NUCKS1,IDH2,RRM2,ACTG1,C12orf75,ZWINT,CENPM,TK1,CD74,TPI1,GZMA,EZH2,LGALS1,GTSE1,BIRC5,HLA-DPB1,HLA-DRB5,NCL,ARPC2,HN1,FEN1,ANP32E,MT1E,APOA2,ARPC5,HNRNPAB,SMC2,SLC25A5,HLA-DPA1,COTL1,PSMB9,PRC1,HNRNPR,IFI16,YBX1,IGLC2,MCM7,CFL1,PGAM1,SNRNP25,DNMT1,CENPW,PSME2,DHFR,XRCC5,USP1,ATP5G3,CARHSP1,DDX39A,RPA3,SUB1,ARPC5L,ACTR3,CCDC167,DNAJC9,PFN1,CLSPN,ITM2A,AURKB,SNRPD1,HNRNPF,COX5A,TPM4,TPX2,HELLS,PKM,CORO1A,NASP,RAD21,SMC1A,LAG3,CD8A,SUMO2,APOBEC3G,ENO1,KIF20B,ATAD2,PSMB8,MAD2L1,YWHAQ,CAP1,SRSF3,ARPC1B,MCM3,PPP1CA,HMGB3,NKG7,PPIA,TPM3,CALM2,PDIA6,PSMA7,HLA-DMA,CDKN3,DTYMK,PARP1,GMNN,UBE2L3,PTMA,HSPB11,THRAP3,LSM5,SNRPB,VIM,BANF1,YWHAE,PA2G4,CKS2,TMEM106C,SMC3,PSMB2,ANAPC11,STRA13,HMGN1,LSM4,CLTA,HP1BP3,SIVA1,CBX3,HNRNPA2B1,CCNA2,COX8A,H2AFY,DUSP4,BUB3,FAM49B,ARPC3,MIR4435-2HG,CENPK,EZR,PSMB6,CAPZA1,DBI,RNF19A,CDKN2A,IGKC,UBE2T,ID3,RALY,ARL6IP1,PPP4C,ITGB1BP1,PARK7,LMNB1,KIF22,PSMB3,PRDX3,EIF5A,OAZ1,ZDHHC12,SEPT7,SRRT,HNRNPC,VDAC1,SLBP,WDR1,RBM3,PSMD8,HNRNPA3,IGHG4,NME1,SERBP1,LDHA,SNRNP40,PSMA1
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD4-C6-CCR7_PMID_31588021,T cell,CCR7,GPR183,GLTSCR2,PABPC1,SELL,EIF3E,C6orf48,NOSIP,AREG,KLF2,SARAF,TPT1,SNHG8,EEF2,TCF7,SOCS3,IL7R,ARID5A,TOMM7,SLC2A3,NACA,BIRC3,PIK3IP1,HBA2,SF1,ZNF90,EIF4B,GNB2L1,ZFAS1,EIF3L,STAT3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD4-C4-CTLA4_PMID_31588021,T cell,TNFRSF4,TNFRSF18,AC133644.2,DUSP4,TIGIT,BATF,LAIR2,PMAIP1,CTSC,UCP2,ICA1,IL32,CARD16,S100A4,IL2RA,TBC1D4,CD27,PKM,CD74,ARID5B,TNFRSF1B,PHLDA1,GPX1,RGS2,CORO1B,DNPH1,UBC,TYMP,HLA-DRB1,RGS1,COX17,SAT1,SH2D1A,MAF,LINC00152,HLA-A,GBP2,LYST,PHPT1,TRAC,PARK7,RBPJ,NR3C1,HLA-DRB5,ARL6IP5,LTB,FKBP1A,PGAM1,CST7,TXN,TMEM173,SIT1,OAZ1,BST2,BRK1,ICOS,CD2,HSPB1,GLRX,ARPC1B,SMS,ITM2A,LAMTOR2,SOD1,C4orf48,ATP5G1,LSP1,IFI6,DUSP2,IL2RG,TRBC2,SAMSN1,HLA-DPB1,NEAT1,TRAPPC1,SRGN,CMTM6,C9orf16,CDK2AP2,PSMB8,VOPP1,DYNLL1,YWHAH,RBX1,COX5B,UBE2N,MYL6,ROMO1,PSMD8,HLA-C,RHBDD2,TMBIM4,HBB,PFN1,RAC1,TCEB2,KLF6,SEC61B,SFT2D1,HERPUD1,RHOC,PRDX1,TNIP1,S100A6,NDUFAF3,LGALS1,TPI1,HLA-DRA,MT1X,HCLS1,NDUFA4,CHMP2A,VAMP8,DYNLRB1,NDUFA11,FIS1,MIEN1,TMEM50A,RNF213,ZNHIT1,ISCU,YWHAQ,HLA-DPA1,ATPIF1,NOP10,ZNF706,SUMO2,DOK2,PRDX2,KRT10,CNIH1,CSTB,RHOG,NDUFB8,PIM3,JUN,PPM1G,SNX3,PDIA6,YWHAB,UQCR11,LAT,CHURC1,TAP1,HN1,ATP5G3,COPE,SIAH2,PIM2,CACYBP,COX6A1,FKBP8,PAIP2,NDFIP1,NDUFV2,ATP5J2,SRP14,EIF4E,MDH2,PPP4C,RORA,LAMTOR5,VMP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD8-C1-GZMK_PMID_31588021,T cell,CCL5,CCL4,KLRB1,GZMH,HSPA1A,S100A4,ALOX5AP,ANXA1,ID2,CD69,NKG7,CD52,SH3BGRL3,S100A11,UBC,CST7,JUN,DUSP2,GZMA,S100A6,AC092580.4,DNAJB1,IL32,CXCR4,ISG15,TNFAIP3,CYBA,CD2,ITM2B,CD99,HLA-C,CKLF,PPP1R15A,APOBEC3G,KLF6,HLA-B,PHLDA1,RARRES3,MYL12A,S100A10,RGS1,HLA-A,TMSB4X,HCST,HLA-DPA1,CRIP1,CCDC107,DUSP1,GPR65,TUBA4A,LCP1,ITGB2,BAX,TMEM50A,FOSB,YWHAQ,MYL12B,MCL1,PSME1,CTSW,RBPJ,CD63,FOS,IL2RG,IDS,VIM,EMB,PSME2,HSP90AA1,HLA-DPB1,TSPO,CD3D,TRAC,MYL6,UBB,IER2,RGCC,PFN1,CD3G,NFKBIA,DNAJA1,CORO1B,ARL6IP5,CLIC1,CD74,CITED2,CD53,TPM3,PLP2,LY6E,LINC00152,CFL1,NEAT1,PSMA7,TAGLN2,PPIB,MT2A,VAMP8,EMP3,NDUFB2,LCK,DUSP4,COTL1,ATP6V0B,HSPH1,C9orf142,LGALS1,NDUFB8,SAMSN1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD8-C3-GNLY_PMID_31588021,T cell,GNLY,GZMA,TYROBP,FCER1G,KLRC1,GZMB,TRDC,NKG7,GSTP1,XCL2,CCL5,HOPX,LGALS1,CCL3,XCL1,KLRD1,CTSW,PRF1,CCL4,CD63,KRT86,TNFRSF18,CD7,LAT2,AC092580.4,MATK,KLRB1,KRT81,CAPG,CTSD,B3GNT7,CD9,KIR2DL4,ID3,CD247,SPRY1,IL2RB,ID2,CD83,KLRC2,ENO1,SERPINE2,STARD3NL,CMC1,TPI1,RGS16,FGR,LSP1,MAFF,ACP5,CCND2,REL,GEM,NME1,NDFIP2,TMIGD2,CKLF,RUNX3,PPP1CA,CD38,HCST,SNRPD1,CEBPB,APOBEC3G,CFL1,TYMS,TIMM13,NFKBIA,STMN1,PSME2,DBI,CLEC2B,ITGA1,BST2,POLR2G,LDLRAD4,CLIC1,COX5A,PSMA4,NCAM1,CLDND1,ATP5J2,PRDX5,SNRNP25,SNRPB,ARPC5L,HSPB11,NDUFB6,CBX3,PFN1,COTL1,DSTN,TMX4,PRELID1,IL32,RANBP1,MAP3K8,GADD45B,FABP5,CST7,BZW1,POLR2L,SEC11A,KIAA0101,AREG,ERH,LMO4,RALY,ARPC2,EVL,IKZF3,PPP1R18,ARPC3,SAR1A,APOBEC3C,RNASEH2B,LY6E,PTPN7,ACTG1,IDH2,HMGN2,ATP5I,SRM,TMED9,SERBP1,RAC2,H2AFY,NDUFA13,H2AFX,GPR65,SRI,SET,MAP2K3,PARP1,HMGB2,PHB,MCM5,DRAP1,EIF5A,EIF3J,COPZ1,ARPC4,FOSL2,PSMB3,TUBA1B,VAPA,SNX10,NOP10,SLC25A5,BHLHE40,LCP1,PIN1,ATP5J,CALM3,NAA38,COMMD7,ITM2A,RHEB,NHP2,NDUFV1,CD96,BID,RAN,UBE2F,NDUFS6,NAA10,COX6C,SLC16A3,ZC3H12A,RHOA,PPIB,NINJ1,SEPT2,TGFB1,FOSB,HMHA1,TLN1,PSMC3,PA2G4,CISD3,TCEB2,DBNL,EFHD2,SYTL3,TMSB4X,ISG15,NDUFB11,MPG,NDUFS8,LAGE3,CRIP1,DUSP2,CALR,GNAI3,ACTN4,ACTR2,CD69,GLIPR2,CMTM3,UBB
Tumor Cell Biodiversity Drives Microenvironmental Reprogramming in Liver Cancer,31588021,T cell/CD8-C2-GZMA_PMID_31588021,T cell,IGLC2,IGKC,IGHG3,STMN1,TUBA1B,HIST1H4C,HMGB2,TOP2A,UBE2C,KIAA0101,HMGN2,ARL6IP1,CDK1,CKS1B,H2AFZ,CENPF,RRM2,HMGB1,NUSAP1,BIRC5,CALM2,TYMS,ANP32E,C12orf75,MAD2L1,HNRNPH1,PTTG1,CDC42,SMC4,HLA-DRB1,PCNA,CBX3,HLA-DRA,HN1,DUT,LINC00152,LGALS1,DEK,TPI1,MT2A,MKI67,NUCKS1,H2AFV,RANBP1,CCL4,COX8A,ZWINT,TK1,SPC25,CRIP1,YWHAH,AURKB,CD74,CKS2,PFN1,CALM3,PPIA,RAN,NUDT1,KIFC1,CFL1,ANAPC11,GTSE1,TMEM106C,CARHSP1,NKG7,RPA3,UBE2T,TMPO,PSMB9,SIVA1,EIF4E,IFNG,RBX1,COTL1,PSMA4,ARPC5,STRA13,ANXA2,CCDC167,CENPA,CLSPN,ASF1B,NAA38,AC092580.4,PRDX1,CAPZA1,DTYMK,UBE2S,HLA-DPA1,HMGA1,MIR4435-2HG,RAD21,CEP55,CCNA2,LBR,CENPM,CORO1A,KIF20B,PSME2,RBBP4,CKLF,CDKN3,ANXA5,AP2S1,HLA-DPB1,LSM4,BUB3,IDH2,GZMA,ENO1,GNG5,CENPW,SNRPD1,ITM2A,HMGN1,SET,PKM,AURKAIP1,DDX39A,PGAM1,DNAJC9,PA2G4,ATP5G3,SNRPG,TXN,SRP9,SNRPB,POMP,CLTA,SLC25A5,TUBA1C,APOBEC3C,SUMO2,CLIC1,DCK,HNRNPM,COX17,KPNA2,HNRNPAB,NME1,H2AFX,TFDP1,DCTN3,PSMB3,BLOC1S1,ROMO1,CDK2AP2,LSP1,SKA2,TCEB2,ANP32B,PSMC3,CSNK2B,ATP5J2,ATP5B,PPP1CA,MZT2B,UQCRQ,YWHAE,EIF2S2,TMX1,DBI,ERH,CENPK,PRDX6,ACYP1,HP1BP3,NASP,TMEM258,EIF5A,UBE2N,FABP5,PSMB2,NCL,SMS,SNRNP25,KIF22,CDT1,NDUFS8,TPM3,MZT1,HLA-DMA,CTSW,HLA-DRB5,ARPC5L,PHF19,DNMT1,ATP5I,HSPA1B,UBE2A,LSM5,HNRNPA2B1,CCL5,HNRNPF,ARPC2,SMC2,NMT1,MAD2L2,H2AFY
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/0_PMID_32976798,T cell,CD69,LTB,TXNIP,S100A4,CD52,GPR183,KLRB1,FOS,XIST,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/1_PMID_32976798,T cell,GZMB,NKG7,FGFBP2,GZMH,KLRD1,PRF1,TYROBP,FCGR3A,PTGDS,KLRF1,CST7,TRDC,S100B,CCL5,SPON2,PLAC8,C1orf21,CTSW,ZEB2,PLEK,TRGC1,CYBA,PRSS23,CD247,KIR2DL3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/2_PMID_32976798,T cell,GZMK,CCL5,CD8B,CCL4,AC069363.1,CD8A,UBE2S,VNN2,ADAM28,PCAT29,AC131056.3,LYST,IGLV3-21,HLA-DRA,ETV1,ADGRG3,HLA-DRB1,NSMCE3,CYBB,HLA-DQA1,HLA-DQA2,SMIM24,CRACR2B,HULC,GZMA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/3_PMID_32976798,T cell,IL7R,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/4_PMID_32976798,T cell,CCL5,CCL4,GZMK,CST7,NKG7,CD8B,CMC1,CD8A,SRGN,CCL4L2,GZMA,XCL2,CXCR4,RGS1,TUBA4A,KLRD1,ZEB2,HLA-DRB1,XCL1,SRSF7,HLA-DQA1,TNFRSF9,NR4A2,YPEL5,HLA-DPB1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/5_PMID_32976798,T cell,DNAJB1,CCL5,HSPA1B,HSPA6,CD69,ZFAND2A,GZMA,CCL4L2,JUN,HSPA1A,APOC3,RGS2,CCL4,DNAJA1,CCL3L3,CD8B,FOS,APOA1,APOA2,ID2,ORM1,DNAJB4,HSP90AA1,APOC1,GZMK,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/6_PMID_32976798,T cell,JUNB,IGHG4,FTH1,ITM2B,CREM,VIM,GLTSCR2,TPT1,IGHG3,MCL1,SRSF2,UQCRB,RGCC,CD8A,BTG1,ACVR2B,LMNA,IGKC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/7_PMID_32976798,T cell,XCL1,CCL5,CCL4,TYROBP,CCL4L2,CCL3,KLRD1,FCER1G,RP11-291B21.2,GZMK,CMC1,PIK3R1,NR4A2,AREG,CD160,IRF8,REL,CD8B,SPRY1,YPEL5,ID2,NR4A3,ZNF683,RASGEF1B,AC092580.4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/8_PMID_32976798,T cell,IL32,TIGIT,CARD16,LAIR2,CD27,TNFRSF4,CTLA4,BATF,TRAC,CTSC,RGS1,ICOS,HLA-A,TBC1D4,SAT1,FOXP3,ARID5B,TNFRSF9,AC017002.1,TNFRSF18,LINC00152,IL2RA,DNPH1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/9_PMID_32976798,T cell,HSPA1B,HSPA1A,HSPA6,DNAJB1,HSP90AA1,HSPH1,ZFAND2A,HSPD1,HSPE1,HSPA8,CACYBP,DNAJA1,DNAJB4,HSP90AB1,BAG3,DNAJA4,PPP1R15A,SERPINH1,DOK2,NR4A1,APOA2,IL32,MALAT1,UBB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/10_PMID_32976798,T cell,LTB,IL32,S100A4,ICA1,TNFRSF18,TRAC,CARD16,BIRC3,TBC1D4,BATF,TIGIT,SPOCK2,LAIR2,ARID5B,CORO1B,FTH1,CD2,PMCH,ICOS,IL2RA,TMSB10,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/11_PMID_32976798,T cell,RASGEF1B,HNRNPH1,RP11-138A9.2,CDC42SE1,PHKG1,C16orf54,PPP1CB,B4GALT1,CTNNB1,WTAP,SET,TRA2A,MDM4,PPP3CA,PIP4K2A,ZDHHC2,RASSF3,PRDM1,IRF2BPL,RBM6,BTBD9,APOL2,RP11-294J22.6,GCNT4,AMFR,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/12_PMID_32976798,T cell,IL32,S100A4,CARD16,CTSC,BATF,TRAC,TIGIT,TNFRSF18,S100A6,HLA-A,AC133644.2,TNFRSF4,LAIR2,ICOS,SAMSN1,GLRX,CTLA4,LTB,TMSB10,CD3D,ENO1,TBC1D4,MYL6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/13_PMID_32976798,T cell,TYROBP,KLRF1,FCER1G,CMC1,NKG7,CD7,CLIC3,KLRB1,KLRD1,CCL4,IFITM2,CDC42SE1,KLRC1,CCL3,GSTP1,C1orf56,TRDC,AREG,REL,XCL2,B4GALT1,XCL1,CD160,SYTL3,HNRNPH1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/14_PMID_32976798,T cell,ITM2A,RGS2,CD8B,FABP5,CD27,LYST,RGS1,HLA-DRA,HLA-DRB1,PCAT29,CCL5,CD74,TNFRSF9,HLA-DPA1,HLA-DPB1,PARK7,CD8A,HLA-DMA,IGKC,TIGIT,NKG7,HLA-DQA1,APOC3,OAZ1,DUSP4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/15_PMID_32976798,T cell,IL32,HLA-A,HLA-C,TMSB4X,TMSB10,TRAC,CFL1,MALAT1,CD2,ARPC1B,LY6E,CORO1A,ATP5E,ACTG1,HNRNPA1,HLA-E,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/16_PMID_32976798,T cell,EIF1,ZFP36,TPT1,RGS1,MALAT1,BTG1,KLF6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/17_PMID_32976798,T cell,JUNB,RGS1,TNFRSF9,LYST,ZNF331,BTG1,ITM2A,CD8A,CREM,CD27,NR4A2,IGHG4,RGS2,FABP5,DONSON,CD8B,TIGIT,RGCC,ITM2B,CTLA4,UBC,TERF2IP,IGHG3,WHSC1L1,SRGN,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/18_PMID_32976798,T cell,HMGB2,TUBA1B,HMGB1,HMGN2,H2AFZ,HIST1H4C,KIAA0101,TOP2A,CKS1B,NUSAP1,PFN1,PTMA,CFL1,COX8A,NUCKS1,H3F3A,CENPF,CALM2,PPIA,UBE2C,HNRNPA2B1,TPI1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,T cell/19_PMID_32976798,T cell,HBA2,HBA1,IFITM3,S100A8,MGP,TM4SF1,IFI27,GNG11,DNASE1L3,S100A9,SPARCL1,CD9,ADIRF,HLA-DRA,A2M,IGFBP7,PLPP1,CALD1,TIMP1,CXCL2,IGHM,TIMP3,SPARC,JCHAIN,CCL2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,NK cell/0_PMID_32976798,NK cell,GZMH,GNLY,RP11-291B21.2,CCL5,KLRD1,ZNF80,FCGR3A,HLA-DPB1,KIR3DL2,FCRL6,IL32,KLRC4,TNIP3,CMC1,HLA-DQA2,KLRG1,HLA-DRB5,CD52,MYO6,PATL2,LILRB1,CTSW,DSTN,KIR2DL3,GZMB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,NK cell/1_PMID_32976798,NK cell,KLRB1,GZMK,JAML,CCL3,CCL4,CD69,XIST,IL7R,XCL1,APOA2,AREG,CCL3L3,ORM1,CXCR6,IRF8,XCL2,ALB,CAPG,HSPA1B,ALOX5AP,NCR3,CORO1A,FABP1,LST1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,NK cell/2_PMID_32976798,NK cell,FTH1,DONSON,CEBPB,MAST3,ENPP2,RP11-973H7.4,SULT1B1,TCEA2,GOLGA6L10,CENPJ,EFEMP1,FBLN7,ZKSCAN7,VCAM1,TPM2,ZNF212,ITGAV,CCDC106,CAMKK1,RP11-245J9.6,RP11-467P9.1,CTC-435M10.3,RP11-727F15.11,ZNF623,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,NK cell/3_PMID_32976798,NK cell,GNLY,GZMB,FGFBP2,PTGDS,IGKC,AKR1C3,PLAC8,SPON2,CYBA,FCGR3A,IGHG4,IGHG3,LAIR2,CX3CR1,IGLC3,MTSS1,S1PR5,RAMP1,AK5,SYTL1,C1orf174,HOXB2,SELL,RASA3,NSG1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,NK cell/4_PMID_32976798,NK cell,RGS1,TNFRSF9,CTLA4,GEM,ICOS,PCAT29,CD27,TIGIT,DUSP4,ITM2A,B3GNT7,ZNF331,CXCL13,AC092580.4,TNFRSF18,AC133644.2,LAYN,CXCR6,YPEL5,ICA1,TBC1D4,LIMS1,DNPH1,TRAC,CREM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,NK cell/5_PMID_32976798,NK cell,PTMA,KLF6,H3F3B,TMSB4X,TNFAIP3,MCL1,GZMH,NKG7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,NK cell/6_PMID_32976798,NK cell,MYOM2,GZMB,PTGDS,FGFBP2,GNLY,IGHG4,GZMH,FCGR3A,IGHG3,THEMIS2,DONSON,IGKC,PRSS23,AKR1C3,TRGC1,CST7,NKG7,IGLC2,C1orf21,PLAC8,PPP3CC,KIR2DL3,RP11-83B20.1,RP11-179B2.2,GTF3C1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,NK cell/7_PMID_32976798,NK cell,KRT86,KLRB1,FCER1G,TYROBP,XCL1,CD7,XCL2,CTSD,APOA2,HSPA1B,KLRC1,GSTP1,TRDC,CTSW,DNAJB1,HSPA6,LSP1,HSPD1,TMIGD2,CD63,NR4A1,DNAJA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,NK cell/8_PMID_32976798,NK cell,FCER1G,KLRC1,TYROBP,CMC1,AREG,IFITM2,CD7,KLRB1,GSTP1,XCL2,CCL3,CD160,GZMK,XCL1,BST2,SRGN,CD63,DNAJA1,HSPD1,PPP1R15A,KLRF1,NR4A1,CCL4,ALOX5AP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,NK cell/9_PMID_32976798,NK cell,GNLY,FGFBP2,CST7,GZMB,FCGR3A,KIR2DL3,GZMH,KIR3DL2,NKG7,PLAC8,PRF1,KIR3DL1,HLA-E,MALAT1,KLRF1,CXCR4,HLA-B,HLA-C,ITGB2,AKR1C3,ZEB2,MYOM2,KLRC2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,MNC/1_PMID_32976798,Macrophage,C1QC,C1QA,SEPP1,LGMN,APOC1,CTSD,CD68,MS4A4A,PLD3,FOLR2,GPNMB,CD63,CTSB,FCGR3A,PSAP,FTL,CD14,LIPA,TYROBP,NPC2,DAB2,FCGRT,RNASE1,CTSC,FCER1G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,MNC/2_PMID_32976798,Monocyte,S100A9,FCN1,VCAN,TIMP1,S100A12,S100A4,LINC01272,EREG,S100A6,AQP9,NAMPT,THBS1,CTB-61M7.2,STXBP2,TREM1,SLC11A1,SOD2,LILRA5,DUSP6,BCL2A1,CD300E,APOBEC3A,CSTA,G0S2,TNFAIP6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,MNC/3_PMID_32976798,Macrophage,RNASE1,CTSD,CSTB,NUPR1,FTL,APOC1,GPNMB,CTSB,APOE,CTSZ,LGALS1,PLTP,FABP5,TREM2,CXCL3,COLEC12,HSPA1A,PLIN2,SCD,CTSL,HSPA1B,MMP19,PLD3,ABL2,CEBPB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,MNC/4_PMID_32976798,Dendritic cell,SNX3,CLEC9A,C1orf54,LGALS2,CPNE3,DNASE1L3,LSP1,NAP1L1,CPVL,CST3,CADM1,IRF8,HLA-DPB1,DUSP4,GSTP1,PPA1,TXN,WDFY4,UPF2,HLA-DQA1,HLA-DOB,SUB1,KIAA0226L,TMSB4X,TMEM14A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,MNC/6_PMID_32976798,Dendritic cell,HLA-DQA1,HLA-DPB1,CLEC10A,HLA-DRB1,HLA-DRA,HLA-DPA1,CD1E,CD1C,JAML,LGALS2,CD74,LST1,HLA-DMA,FCER1A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,MNC/7_PMID_32976798,Macrophage,C1QB,C1QA,SLC40A1,APOE,CCL3,CCL3L3,C1QC,MS4A7,CCL4L2,LIPA,APOC1,CD5L,VCAM1,CST3,FOLR2,SDC3,ITM2B,CCL4,CXCL2,LGMN,IGF1,CD163,HES1,FOS,IER3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Onco-fetal Reprogramming of Endothelial Cells Drives Immunosuppressive Macrophages in Hepatocellular Carcinoma,32976798,MNC/8_PMID_32976798,B cell,JCHAIN,IGKC,PLAC8,IRF4,C12orf75,LILRA4,ALOX5AP,SOX4,PTGDS,MZB1,CXCR3,TSPAN13,ITM2C,IRF7,LTB,TPM2,TCL1A,IL3RA,SEC61B,CLIC3,RAB11FIP1,LPIN1,NR3C1,SEL1L3,NEK8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,Activated DC_PMID_31675496,Dendritic cell,FSCN1,BIRC3,LAMP3,CCL19,LAD1,MARCKS,TNFAIP2,CCR7,CCL22,MARCKSL1,EBI3,TNFRSF11B,NUB1,INSM1,RAB9A,LY75,SIAH2,POGLUT1,KDM2B,MGLL,TXN,MLLT6,KIF2A,GRSF1,FAM49A,PLEKHG1,SOCS2,RFTN1,AC009812.4,BMP2K,NAV1,IL7R,ID2,CCL17,PPP1R9B,NRP2,ARNTL2,UVRAG,TXNDC11,MREG,BTG1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,Migratory DC_PMID_31675496,Dendritic cell,GAL3ST,NUDT17,ITGB8,ADCY6,ENO2,IL15RA,SOCS2,IL15,STAP2,PHF24,ANKRD33B,INSM1,ANXA3,ARHGAP28,RNF115,ADORA2A,EXTL1,SPSB,SLC22A23,RABGAP1,GYG1,DAP,OGFR,GYG2,CCSER2,TMEM123,NET1,GPR52,SLCO5A1,FAH,CLU,PCGF5,SAMSN1,CDKN2B,BMP2K,ZC2HC1A,SERINC5,HIVEP1,CNR1,CNR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,naïve T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,CCR7,LEF1,SELL,TCF7,S1PR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,central memory T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,CCR7,SELL,ANXA1,ANXA2,S1PR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,central memory T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,IL7R,CD74,TYROBP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,naïve T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,CCR7,LEF1,SELL,TCF7,S1PR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,exhausted T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,CD4,HAVCR2,PDCD1,GZMB,ITGAE,CXCL13,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,regulatory T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,FOXP3,CTLA4,IL2RA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,proliferative T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,MKI67,STMN1,CMC1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,central memory T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,CD8,IL7R,CD74,TYROBP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,effector T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,CX3CR1,KLRG1,FCGR3A,FGFBP2,S1PR1,GZMH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,central memory T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,CCR7,SELL,ANXA1,ANXA2,S1PR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,effector memory T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,GZMK,CCL4,CCL5,NKG7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,tissue resident memory T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,KLRD1,KLRF1,GNLY,IL32,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,exhausted T cells_PMID_31675496,T cell,CD3D,CD3E,CD3G,HAVCR2,PDCD1,GZMB,ITGAE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,MAIT_PMID_31675496,T cell,CD3D,CD3E,CD3G,SLC4A10,KLRB1,ZBTB16,NCR3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,circulating NK cells - blood_PMID_31675496,NK cell,NKG7,FCGR3A,FGFBP2,CX3CR1,TYROBP,GNLY,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,CD56 high NK cells - blood_PMID_31675496,NK cell,NKG7,SELL,NCAM1,KLRD1,GNLY,CCL3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,circulating NK cells - tissue_PMID_31675496,NK cell,NKG7,FCGR3A,IFNG,GNLY,GZMB,CD69,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,circulating NK cells - tumor_PMID_31675496,NK cell,NKG7,FCGR3A,IFNG,GNLY,GZMB,CD69,HSPA1A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,CD56 int NK cells - tissue_PMID_31675496,NK cell,NKG7,CD69,XCL1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,CD56 high NK cells - tissue_PMID_31675496,NK cell,NKG7,IL7R,AREG,CCL3,CCL5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,tissue-resident NK cells - tissue_PMID_31675496,NK cell,NKG7,CD160,TIGIT,CCL4,CCL3,IL32,CXCR4,ZNF331,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,tissue-resident NK cells - tumor_PMID_31675496,NK cell,NKG7,CD160,HSPA1A,DNAJB1,HSPA1B,HSPA6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,proliferative NK cells_PMID_31675496,NK cell,NKG7,MKI67,STMN,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,classical monocytes_PMID_31675496,Monocyte,CST3,LYZ,CD14,VCAN,S100A9,RNASE2,S100A12,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,non-classical monocytes_PMID_31675496,Monocyte,CST3,LYZ,FCGR3A,FCER1G,LST1,AIF1,IFITM3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,CD1C DCs - tissue_PMID_31675496,Dendritic cell,CST3,LYZ,CD1C,FCER1A,CLEC10A,VEGFA,IRF4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,CD1C DCs - ascites_PMID_31675496,Dendritic cell,CST3,LYZ,CD1C,RGS2,FCER1A,CLEC10A,IRF4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,CD141 DCs_PMID_31675496,Dendritic cell,CST3,LYZ,CLEC9A,IRF8,IDO1,CLNK,XCR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,LAMP3+ DCs_PMID_31675496,Dendritic cell,CST3,LYZ,LAMP3,IDO1,CD274,LTB,CCL19,CCL21,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,MDSC-like macrophage_PMID_31675496,Macrophage,CST3,LYZ,CD68,THBS1,S100A8,S100A9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,TAM-like macrophage_PMID_31675496,Macrophage,CST3,LYZ,CD68,CD163,CD169,C1QA,SLC40A1,GPNMB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,macrophages - tissue_PMID_31675496,Macrophage,CST3,LYZ,CD68,CD163,CD169,APOE,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,macrophages - tissue_PMID_31675496,Macrophage,CST3,LYZ,CD68,FCGR3A,SAT1,LST1,HLA-DQB1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,macrophages - ascites_PMID_31675496,Macrophage,CST3,LYZ,CD68,S100A4,HLA-DRA,HLA-DQA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,macrophages - ascites_PMID_31675496,Macrophage,CST3,LYZ,CD68,MARCO,S100A9,CD163,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,mast cells_PMID_31675496,Mast cell,CST3,S100A9,AIF1,CD79A,IL7R,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,mast cells_PMID_31675496,Mast cell,CST3,S100A9,AIF1,CD79A,CPA3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,type 3 innate lymphoid cells_PMID_31675496,NK cell,KIT,KLRF1,KLRB1,KLRD1,GZMK,GZMH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,B cells_PMID_31675496,B cell,CD19,CD79A,MS4A1,CD22,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,plasma B cells_PMID_31675496,B cell,CD19,CD79A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,DC-c1-CD1C_PMID_31675496,Dendritic cell,CLEC10A,C1orf162,IGKC,IGSF6,HBEGF,CREM,CD1C,MS4A6A,RGS2,RNF130,FCGR2B,FAM26F,IFITM3,RNASE6,CD83,FCGRT,ATF3,CD1E,SAMHD1,AREG,TYROBP,FCGR2A,NR4A3,TGFBI,ISG20,CSTA,CKLF,CXCR4,CASP1,LY86,IGLC3,IL13RA1,CD163,IGHG4,FCER1A,CHMP1B,ALOX5AP,IL1R2,RGS1,LITAF,IFI30,CYBB,CLEC4A,RGCC,IL18,C20orf27,FILIP1L,CEBPB,TBXAS1,SGK1,PSTPIP2,GAPT,SERPINB9,NCF2,SLC2A3,WFDC21P,CD300A,FCER1G,IGHG3,SAMSN1,CPVL,ZNF331,CSF1R,CLEC12A,PLD4,KDM6B,GLUL,PYCARD,CD69,CTSB,CD302,SARAF,DOK2,NFE2L2,SKAP2,DUSP4,CTSH,PHACTR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,DC-c2-FCER1A_PMID_31675496,Dendritic cell,C1orf162,CLEC10A,S100A6,IFITM3,MS4A6A,FCER1G,TYROBP,EMP3,S100A4,FCGRT,TIMP1,CEBPB,SAMHD1,SH3BGRL3,FCGR2B,S100A10,VSIG4,IGSF6,CKLF,CST3,RNF130,RNASE6,S100A9,IFITM2,CPVL,TSPO,CSTA,CD14,DOK2,AIF1,S100A11,ZEB2,PYCARD,CYBA,SERPINA1,FCGR2A,LST1,FCER1A,FCN1,LY86,MAP3K8,HBEGF,CSF1R,ARHGDIB,S100A8,CD1C,ANXA2,FPR1,VCAN,CYBB,CTSH,FXYD5,NFKBIA,ALOX5AP,RNASET2,APLP2,CARD16,CD302,HCST,ITGB2,ENHO,NCF2,CLEC12A,KLF2,CFP,RBPJ,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,DC-c3-CLEC9A_PMID_31675496,Dendritic cell,SNX3,C1orf162,C1orf54,CLEC9A,CPVL,CPNE3,IRF8,RNASET2,TMSB4X,RGCC,PTPRE,DNASE1L3,AIF1,CST3,WDFY4,ARHGDIB,DUSP4,MPEG1,RGS10,FNBP1,IDO1,FCGRT,FGL2,CADM1,WFDC21P,CKLF,SAMHD1,CYB5R3,PPT1,CD74,C20orf27,NAPSB,PYCARD,XCR1,TAP1,BATF3,ID2,TMEM14A,TMSB4XP4,NAP1L1,ICAM3,MZT2A,TGFBI,CLNK,RAB7B,S100A10,LY86,SLAMF7,LYZ,HLA-DMB,MYL6,LGALS2,BIN1,CD48,PSMB9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape and Dynamics of Single Immune Cells in Hepatocellular Carcinoma,31675496,DC-c4-LAMP3_PMID_31675496,Dendritic cell,BIRC3,BTG1,CCR7,CD83,LAMP3,MARCKSL1,RASSF4,TXN,RGS1,MALAT1_ENSG00000251562,PNRC1,CFLAR,GPX4,ID2,IGKC,RAB9A,STK4,NFKBIA,IL7R,CCL19,FSCN1,DUSP4,GRSF1,DAPP1,IDO1,IER3,IL32,TUBA1C,SAMSN1,ISCU,CTSH,MARCKS,NUB1,CDKN1A,KIF2A,DUSP5,IL13RA1,FNBP1,ZFAND5,TYROBP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C1_CD8−LEF1 cells_PMID_28622514,T cell,CCR7,SELL,LEF1,LDLRAP1,TCF7,NELL2,SERINC5,TXK,MYC,NOSIP,ACTN1,DGKA,MAL,ABLIM1,TRABD2A,TMEM123,PDE3B,LDHB,PRKCQ-AS1,RCAN3,CD55,RASGRP2,TMEM63A,PIK3IP1,TMEM204,FAM102A,FOXP1,THEM4,C1orf162,GPR183,LEF1-AS1,TNFSF8,OXNAD1,CAMK4,EPHX2,SPINT2,CA6,LRRC75A-AS1,FKBP5,GLTSCR2,EIF3L,FAM117B,LRRN3,LINC01550,PASK,STMN3,SCML4,NDFIP1,PSIP1,EIF3E,ATM,CD248,BACH2,GAS5,SMAP2,APBA2,GPR155,C6orf48,APEX1,NPAT,CEP68,EEF2,NPM1,PLEKHB1,ZNF101,ARHGEF18,VIPR1,SNED1,UBQLN2,SPTBN1,NT5E,ARHGAP45,GIMAP2,LRRC75A,R3HDM4,MLXIP,C1orf228,ITFG2,MAML2,TRAP1,WDR43,PDK1,RACK1,SGSM3,IGF1R,SNURF,TRMT1,GCSAM,SH3YL1,EXOSC8,COQ8A,RIC3,AIF1,LMO7,FAM60A,TOMM7,TPCN1,BEX4,THAP7,NOG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C2_CD8-CX3CR1 cells_PMID_28622514,T cell,CX3CR1,FGFBP2,GNLY,FCGR3A,GZMH,FGR,GZMB,FCRL6,KLRD1,PLEK,ADGRG1,S1PR5,TGFBR3,C1orf21,PRSS23,EFHD2,ADRB2,ZEB2,PXN,PATL2,LILRB1,SAMD3,SYNE1,C12orf75,LITAF,FCGR3B,RASSF1,VCL,FLNA,TBX21,MYO1F,TTC38,SPON2,GAB3,LGALS1,SH3BP5,MYO1G,AHNAK,PRKCB,TPST2,SH3BP5-AS1,RAP2B,USP28,ITGAM,RAP1GAP2,OSBPL5,CEP78,BIN2,MBP,GLUL,CAPN2,MTSS1,SLC9A3R1,LPCAT1,EMP3,ADAM8,DSTN,ZEB2-AS1,PLEKHG3,ARL4C,STK10,RNF166,CD300A,ARHGAP25,TM4SF19-TCTEX1D2,AGTPBP1,KLRF1,LUZP6,TTC16,GK5,RAP1B,PIK3R5,RGS19,CASP8,LLGL2,TM4SF19,SRPK2,SLC2A1,TAGLN2,VEZF1,FUT11,ZNF600,WDR37,KCNAB2,SLCO4C1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C3_CD8-SLC4A10 cells_PMID_28622514,T cell,SLC4A10,KLRB1,IL18RAP,DPP4,COLQ,ZBTB16,CCR6,NCR3,IFNGR1,CD40LG,SESN1,RORC,JAML,ERN1,SLAMF1,DUSP1,TMIGD2,GPR171,IL18R1,IL23R,LST1,ME1,TC2N,RORA,SPOCK2,SYTL2,CD160,TBC1D31,GPR65,RUNX2,GYG1,MBOAT1,APOL3,PHACTR2,FKBP11,ODF2L,TTC39C,IKZF2,LTK,HACL1,PRNP,LOC643733,CERK,PBXIP1,TRAT1,NFKBIA,TLE1,TNF,NR1D1,IL4I1,CCR1,IL12RB2,CTSH,CEBPD,GALC,ADAM12,HPGD,OBFC1,PDK3,PNP,TMEM71,MKNK1,DKK3,CCR2,NRIP1,EDEM2,TSPAN15,B3GALT2,P2RY14,FLT4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C4_CD8-LAYN cells_PMID_28622514,T cell,RGS1,PDCD1,HAVCR2,TIGIT,LYST,PHLDA1,CCL3,TNFRSF9,HLA-DRA,CXCR6,TOX,ENTPD1,CTLA4,CD27,SIRPG,NR4A2,ITM2A,CD27-AS1,COTL1,WARS,IFNG,ICOS,CSF1,TNFRSF1B,DUSP4,CREM,ITGAE,CTSD,RGS2,HLA-DMA,IL2RB,SNAP47,LAG3,SAMSN1,ACP5,MIR155HG,FKBP1A,MYO7A,OASL,AKAP5,AFAP1L2,CD38,CCND2,PAM,APOBEC3G,RNF19A,TRAF5,ASB2,APOBEC3C,HNRNPLL,SARDH,PTPN22,LAYN,RAB27A,FASLG,FUT8,ENTPD1-AS1,TBC1D4,CD82,CHST12,PRDM1,EPSTI1,MYO1E,RBPJ,CD63,ID2,YARS,NEDD9,CBLB,TNFAIP3,VCAM1,GALM,CXCL13,TPI1,IGFLR1,ARID5B,BCL2L11,ACTN4,SRGN,PTPN7,NAB1,TYMP,ARHGAP9,FKBP1A-SDCBP2,WHRN,RALGDS,BST2,NDFIP2,ZFP36L1,P2RY10,CD84,SLA,SNX9,UBE2L6,LINC00299,GGA2,ETV1,SEL1L3,GBP4,MS4A6A,PARP14,RIN3,KLRC4,OSBPL3,PARK7,CCDC141,TNFSF4,ATP8B4,IKZF3,SPTAN1,ATXN1,MTHFD2,TRPS1,STAT3,GOLIM4,MIR4632,ID3,CLECL1,IFI16,APOBEC3F,TOX2,TRAFD1,APOBEC3D,LAT2,IFI6,PRKAR1A,ANXA5,PTPN11,MAPKAPK3,PHTF2,PPM1G,MTHFD1,RHBDD2,TNS3,EID1,TTC24,CD7,ETNK1,COQ10B,CD2BP2,MAPRE2,SYNGR2,GABARAPL1,BATF,LIMS1,IFI35,LY6E,CASP3,PKM,GBP2,LSP1,VMP1,PLPP1,PRKCH,IRF9,GFOD1,PRDX5,KIF20B,NRBP1,FAM3C,GBP1,SUSD6,BTG3,PTMS,MIR497HG,PSTPIP1,ZBED2,CLNK,DGKH,CD200,CLSTN3,IFI27L2,TBK1,MCL1,TBL1XR1,IRF2,TTYH3,RHOH,MIR155,MX1,MIS18BP1,NCF4,ABCG1,PLSCR1,AHI1,MAP2K3,PFKP,SEMA4A,SRGAP3,UBASH3B,NFAT5,VAMP5,RNF31,SAMD9L,DDX60,PMF1,SKIV2L2,OS9,GPD2,SP140
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C5_CD8-GZMK cells_PMID_28622514,T cell,GZMK,PIK3R1,EML4,DUSP6,PDCD4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C6_CD4-CCR7 cells_PMID_28622514,T cell,CCR7,TCF7,TXK,MYC,IL7R,MAL,LDLRAP1,NOSIP,GPR183,ABLIM1,GIMAP5,SERINC5,SATB1,TRABD2A,CD55,C1orf162,ACTN1,TESPA1,TMEM204,FHIT,PRKCA,EIF3L,LRRC75A-AS1,NELL2,SLC40A1,GIMAP8,TSHZ2,RSL1D1,C6orf48,SVIL,LRRN3,FAM117B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C7_CD4-FOXP3 cells_PMID_28622514,T cell,IL2RA,TTN,RTKN2,FCMR,FOXP3,CCDC141,CCR4,IL10RA,STAM,TTC39C,PDP1,HAPLN3,IKZF2,RNF214,F5,CCM2,SAMHD1,PI16,FCRL3,BIRC3,USP15,ANXA2P2,SELPLG,ISG20,FANK1,TLDC2,LMNA,CORO7,ATP2B1,SNX20,CLDND1,CORO7-PAM16,ELK3,TBC1D4,CCR10,FAM110A,GLRX,CASP2,CPNE2,REREP3,TRIM16,HPGD,B3GNT2,METTL7A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C8_CD4-CTLA4 cells_PMID_28622514,T cell,FOXP3,TNFRSF18,TIGIT,TNFRSF9,CTLA4,CXCR6,CCR8,LAYN,TBC1D4,RGS1,TNFRSF4,IKZF2,IL2RA,CD27,DUSP4,ICOS,CTSC,NAMPT,BATF,PHLDA1,IL2RB,CD27-AS1,ENTPD1,TNFRSF1B,ACP5,CREM,STAM,PHTF2,SYNGR2,RHOC,TYMP,SDC4,SAT1,SIRPG,IL12RB2,CXCR3,RTKN2,TNFAIP3,GBP2,NEDD9,LAIR2,PIM2,PELI1,IL21R,DNPH1,F5,CCND2,TPP1,IKZF4,PTTG1,PMAIP1,BTG3,CARD16,SAMSN1,UGP2,CREB3L2,NDFIP2,SPATS2L,SH2D2A,CD82,GADD45A,GPX1,IL1R1,SNX9,CD7,CCDC22,DDIT4,VDR,CASP1,CSF1,HAVCR2,TFRC,SLAMF1,FKBP1A,ENTPD1-AS1,GBP5,KAT2B,MIR4632,CD79B,LYST,CLEC7A,TRAF1,ARID5B,ASB2,LAPTM4B,GLRX,BIRC3,CORO1B,SERPINE2,RHBDD2,MAST4,PHACTR2,DUSP16,ZFP36L1,NCOA3,NCF4,ATP1B1,IGFLR1,ERI1,SCO2,MIR4435-2HG,PRNP,IFI6,MAN1A2,HNRNPLL,SERPINB9,OAS1,CD74,IL21R-AS1,LTA,BEX3,C3AR1,CD58,IL1R2,PKM,VAV3,SLA,HLA-DMA,MAF,SURF4,PPM1G,CTNNB1,EPSTI1,HSPA1A,MICAL2,ANKRD10,CD83,GOLGA8B,BST2,APLP2,RAB11FIP1,OTUD5,DPYSL2,STAMBPL1,ICA1,PTPRJ,PRDM1,GK,TMEM154,CDIP1,MAGEH1,SLC41A1,TNFRSF13B,C15orf53,LGALS3,HLA-DQA1,VCP,ARPP19,ADAT2,GOLGA8A,WHRN,PTP4A3,GRN,DDX24,TNIP3,GALM,MZB1,ETV7,ENO1,MYO5A,MIR497HG,PARK7,SQSTM1,TBC1D8,CD59,TET2,WSB1,MAP2K3,ARHGEF12,REREP3,PIM3,FAM53B,PPP1CB,ADAM10,CMTM6,FKBP1A-SDCBP2,CDKN1A,BRE,INPP5F,AKIRIN2,FANCL,CTNNA1,HTATIP2,LY75,FAS,FAM104A,ZBED2,LASP1,VMP1,CCDC141,PDE4A,COL9A2,NUDT5,HSPA1B,CEACAM1,SPOCK2,HSPB1,C21orf91,PDIA6,FOXO1
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C9_CD4-GZMK cells_PMID_28622514,T cell,GZMK,CD69,DPP4,IFNGR1,DUSP1,PARP8,PVRIG,CAPG,ABCB1,SLC4A10,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C10_CD4-CXCL13 cells_PMID_28622514,T cell,PDCD1,RGS1,CXCL13,ADAM19,F2R,RBPJ,ITM2A,NR3C1,TNFSF8,RNF19A,DUSP4,TIGIT,LYST,SIRPG,AHI1,MAF,GBP4,TOX,ICOS,BHLHE40-AS1,CREM,ASB2,CTSD,IKZF3,IFNG,TRPS1,ATXN1,ETV7,BTLA,TBXAS1,RGS2,LIMS1,SLC9A9,SRGN,EPSTI1,CTLA4,CCDC50,CD84,SARDH,WARS,SMC5,TOX2,PHTF2,NAB1,PSME2,GALM,PRKAR1A,RABGAP1L,IL21,CD82,TMEM2,METTL8,PDE7B,TBC1D2B,SQRDL,DBNL,PTTG1,CD38,SUSD6,GSPT1,DR1,BST2,MIR155HG,FUT8,UBE2L6,UNQ6494,CLTC,PRKAG1,SFXN1,LASP1,NMI,IFI35,ZEB1,HAVCR2,IGFLR1,RILPL2,CHN1,LAP3,PTPN11,LIMA1,ATP5C1,SPOCK2,PKM,ZBED2,RHBDD2,SHFM1,RAB11FIP1,WSB2,ST8SIA1,ATP6V1A,TNFRSF18,CAPZB,N4BP2,CDKN2A,TRAF3,MAPKAPK3,SLC6A6,GNG4,NUTF2,ENTPD1,ITGA2,CAMK1,PHEX,AKR1A1,HNRNPK,UQCRH,IFI27L2,C9orf16,TPI1,DNPH1,OGG1,SYNJ1,CKAP2,ARHGAP9,KCNK5,LINC00963,MAP1LC3A,BATF,NDFIP2,FKBP1A-SDCBP2,AKAP5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Landscape of Infiltrating T Cells in Liver Cancer Revealed by Single-Cell Sequencing,28622514,C11_CD4-GNLY cells_PMID_28622514,T cell,NKG7,GNLY,GZMH,CX3CR1,FGFBP2,PLEK,GZMB,CCL5,KLRG1,PRF1,TARP,GZMA,S1PR5,ZEB2,FCRL6,ADGRG1,CTSW,SLAMF7,ADRB2,HOPX,CCL4,SAMD3,CST7,TGFBR3,CD300A,FGR,C1orf21,A2M,C12orf75,EFHD2,PRSS23,PXN,LITAF,SYNE1,MYO1F,PATL2,RASSF1,LINC00612,PZP,LYAR,SPN,MYBL1,VCL,SPON2,CHST12,PTPN4,RUNX3,RAP2B,AHNAK,ABI3,PLEKHG3,CEP78,GZMM,PLEKHA1,SH3BP5,LPCAT1,ZNF683,APMAP,ADGRG5,RAB29,GLUL,RAP1B,MBP,ZEB2-AS1,ARL4C,TTC16,GSTP1,PTCH1,LLGL2,SLC2A1,FCGR3A,SUN2,TMEM181,DSTN,LGR6,GK5,ARL5A,TTC38,SYNE2,LOC100130872,AGPAT4,CD244,NPRL2,TM4SF19,TM4SF19-TCTEX1D2,PAFAH2,ABCA2,FUT11,PROK2,LILRB1,PTGDS,AKR1C3,OSBPL5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,41BB-Hi CD8+ T cell_PMID_33711272,T cell,TNFRSF9,CXCL13,CCL4,VCAM1,FXYD2,MIR155HG,CCL3,CRTAM,CD27,LAG3,PKM,HLA-DRB1,LINC01943,IFNG,HLA-DQA1,CD74,FAM3C,HAVCR2,GZMK,CD82,GZMB,NKG7,SOD1,FABP5,CD8A,TSC22D1,ITM2A,TIGIT,PARK7,DUSP4,BIRC3,RILPL2,PTMS,HLA-DRA,NFKBIA,CMC1,LYST,SNAP47,HLA-DPA1,HLA-DMA,HLA-DRB5,PGAM1,LSP1,HLA-DQB1,SYNGR2,CD8B,ISCU,HLA-B,HLA-DRB6,GALM,TPI1,PDCD1,UCP2,TNFRSF1B,BATF,HLA-A,CD2,EOMES,CALR,RAB27A,SH2D2A,HLA-DPB1,IL10RA,IL2RG,PRF1,FKBP1A,DUSP2,LBH,CLEC2D,MFSD10,CD2BP2,CST7,SIT1,CD3D,CCND2,RGS2,SUB1,CTSW,CDK2AP2,RAN,DGKZ,ARL6IP5,PMF1,VOPP1,TMSB10,ANXA6,GBP2,PSME2,SEM1,LITAF,COX17,SEC61B,HSP90AB1,HLA-C,PTPN7,EZR,HSPB1,SLA,TAP1,ENO1,RBPJ,APOBEC3G,ARL6IP1,LAMP1,ADGRE5,CCDC167,PSMB9,CALM3,CFLAR,PHPT1,ANXA5,RGS1,EID1,PSTPIP1,EDF1,RANBP1,ARPC5L,ENSA,NDUFC2,HCP5,ATP5MC1,HLA-F,SIRPG,COPZ1,SCAMP2,UBB,TRAC,PTPN6,PRDX1,PDIA3,SRI,PSMB8,ITGB7,PSMA2,DBI,VCP,OAZ1,POLR2K,APOBEC3C,PDIA6,BAX,VDAC1,CYCS,PSMB3,SELENOH,TYMP,IFI27L2,HSP90B1,COTL1,DYNLRB1,MT2A,CD3E,SDF2L1,ARPC2,AIF1,GABARAPL2,LAMTOR5,HMGN3,LAPTM5,TRBC2,ZNF706,ZFP36L1,CSNK2B,AIP,PGK1,ATP5IF1,SDHC,HSD17B10,ARPC5,COX8A,TANK,CCL5,SH3KBP1,TERF2IP,RHOA,PRDX6,UBC,LIMD2,SLC25A3,SEC11C,ATP5MF,SRGN,RABAC1,XRCC6,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,41BB-Lo CD8+ T cell_PMID_33711272,T cell,GZMK,CD8A,CD8B,GZMH,CCL5,GZMA,NKG7,CST7,TRBC2,CD3D,CD3E,APOBEC3G,GIMAP4,CD27,RARRES3,LAG3,GIMAP7,CD3G,APOBEC3C,ITM2C,SIT1,HAVCR2,HLA-DPB1,HLA-DPA1,CD2,COTL1,TRAC,PTMS,RGS1,CYTOR,ITM2A,CXCR6,CTSC,HLA-DRB1,CXCR3,HCST,IL32,FYB1,EVL,TBC1D10C,HLA-DRB5,GUK1,ANXA5,PCED1B-AS1,PTPRC,SH3BGRL3,LCK,CLEC2B,IDH2,PPP1R18,ATP5F1E,DUSP2,STK17A,PSMB9,CHST12,LIMD2,ITGB2,PTP4A2,TMSB4X,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,B cell_PMID_33711272,B cell,MS4A1,CD79A,HLA-DRA,VPREB3,CD79B,SMIM14,BANK1,IGHM,CD74,MEF2C,NAPSB,HLA-DQB1,1-Mar,ARHGAP24,LINC01781,HLA-DQA2,POU2F2,HLA-DPB1,TNFRSF13B,ADAM28,TNFRSF13C,LINC00926,SELL,BLK,IRF8,CD37,LY86,TCF4,HLA-DPA1,SPIB,CTSH,CD19,CD22,CD83,GPR183,BLNK,LTB,ORAI2,SWAP70,FTH1,HLA-DMB,PKIG,POU2AF1,CD40,PABPC1,HLA-DQA1,FCMR,DRAM2,FTL,PLAC8,SYPL1,DUSP1,NR4A2,PDLIM1,JUNB,CHCHD10,CCDC50,RIPOR2,AC020916.1,ZFAS1,EEF2,SNHG29,PPP1R15A,HLA-DMA,SNX2,NOP53,RNASET2,FOSB,SMARCB1,LAPTM5,FOS,HLA-DRB1,TPT1,AL513365.1,GAS5,GRN,NACA,SNHG8,TOMM7,RACK1,AC008038.1,AC114760.2,MBD4,NAP1L1,SLC25A6,GPX1,BTG2,EIF3E,SMDT1,SYNGR2,EVI2B,CTSS,UBA52,HLA-DRB5,FAU,SP110,SNHG25,EIF3L,BIRC3,TMEM243,EIF1AY,RGS19,SNX3,SMAP2,CAPG,PTPN6,HLA-DRB6,PPM1K,IDS,AC004687.1,HMGA1,EIF2S3,ERP29,NPC2,ST13,HSP90AB1,SERP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,Cycling CD8+ T cell_PMID_33711272,T cell,TUBA1B,STMN1,HIST1H4C,HMGB2,UBE2C,PCLAF,TYMS,H2AFZ,TOP2A,HMGN2,MKI67,RRM2,CKS1B,BIRC5,PCNA,CKS2,CENPF,AURKB,H2AFV,DUT,H2AFX,CDK1,PTTG1,ZWINT,TK1,NUSAP1,KPNA2,CCNA2,HMGB1,ASPM,ASF1B,MCM7,SMC4,CENPM,ARL6IP1,UBE2S,CDC20,FABP5,MAD2L1,CDKN3,CCNB2,MT2A,GTSE1,ANP32B,RAN,KIF22,SMC2,UBE2T,DEK,RANBP1,CCNB1,CLSPN,VIM,JPT1,MXD3,KIFC1,CENPW,TPX2,TUBA1C,FEN1,CENPU,TPI1,NUDT1,CENPA,CALM3,DTYMK,TMEM106C,SPC25,CDT1,SLC25A5,LMNB1,RPA3,NUCKS1,KIF20B,DNAJC9,PTMA,SAE1,DDX39A,MCM3,CXCL13,CDCA8,PPIA,CDCA5,RAD51AP1,CENPE,DLGAP5,TMPO,HNRNPA2B1,GGH,CALM2,HMGB3,CENPN,SIVA1,CARHSP1,PKM,NUF2,NASP,CDCA3,COX8A,ANP32E,CDCA4,MZT2B,AURKA,SAC3D1,COTL1,SRSF3,TACC3,ACTG1,SNRPD1,GINS2,CKAP2L,FBXO5,LSM5,MCM5,HLA-DRB1,H2AFY,EZH2,ENO1,TUBA4A,TCF19,SNRPB,HJURP,CCDC34,IDH2,CFL1,CENPK,YWHAH,NDC80,KIF2C,CDKN2C,CENPX,RACGAP1,RRM1,SGO1,PFN1,SGO2,SLBP,RAD21,ARPC5,USP1,CENPH,SKA2,LSM4,SNRPG,RMI2,ZDHHC12,HNRNPA3,LGALS1,CCDC167,HIRIP3,PHF19,UBB,ANAPC11,PGAM1,SRSF2,HMGN1,ORC6,YEATS4,GMNN,ANXA5,LDHA,SSRP1,SNRPF,HELLS,PSMB9,PSMC3,DNMT1,CDC25B,DCTN3,BANF1,C12orf75,SMC3,YBX1,ERH,ATAD2,RALY,CBX5,TALDO1,DHFR,MAD2L2,CDKN2D,HNRNPF,LSM3,YWHAQ,PSMB2,CORO1A,EBP,PA2G4,NUCB2,ACYP1,CRIP1,HNRNPAB,ATP5MC3,HLA-DRA,COX5A,PSME2,CHCHD2,CDK4,SRSF10,TFDP1
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,Effector T-Helper_PMID_33711272,T cell,IL7R,CD40LG,FOS,LTB,KLRB1,S100A4,JUN,JUNB,S100A10,NR3C1,TMEM123,ANXA1,ZFP36L2,FXYD5,TPT1,TMEM173,TSC22D3,FKBP5,DUSP1,SARAF,CAPG,KLF6,GPR171,CD52,CORO1B,SLC2A3,VSIR,ZFP36,PBXIP1,PABPC1,SPOCK2,S100A11,CD69,FTH1,BTG2,LEPROTL1,CD6,TXNIP,BTG1,OCIAD2,VIM,ABRACL,LINC-PINT,NFKBIA,IFITM2,TNFAIP8,HSPA1B,S100A6,EMB,RGS10,PIK3IP1,PLP2,RNASET2,PRDX2,GMFG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,FGFBP2- NK_PMID_33711272,NK cell,KLRC1,GNLY,TYROBP,TRDC,KRT81,KLRB1,KRT86,KLRD1,ZNF683,HOPX,CD7,FCER1G,MATK,XCL1,TMIGD2,IFITM1,XCL2,IL2RB,ZFP36L2,CTSW,MAPK1,CLIC3,PIK3R1,LINC01871,CD63,ID2,GSTP1,GABARAPL1,TXNIP,CD247,ALOX5AP,CMC1,ITGB1,SRGN,CXCR4,CD96,CCL5,BTG1,SYTL3,LITAF,ETS1,SOCS1,RP11-640M9.1,MTATP6P1,ZFP36,XIST,CYTIP,PRF1,CHST12,MIF,CD69,IFITM2,OSTF1,CLEC2B,ITM2C,CD44,HCST,PIK3IP1,RUNX3,PDCD4,DNAJB6,AC008038.1,SAMSN1,LEPROTL1,STK4,ELF1,GLIPR2,BIN2,SARAF,EVI2A,CCL3,STK17A,CCL4,LCP1,PABPC1,MYO1F,FAM49B,WIPF1,CELF2,CTSD,EIF4A2,CRIP1,EIF3G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,FGFBP2+ NK_PMID_33711272,NK cell,FGFBP2,GNLY,SPON2,KLRF1,FCGR3A,PLAC8,FCER1G,TYROBP,KLRD1,MYOM2,GZMB,CLIC3,KLRB1,PRF1,S1PR5,IGFBP7,C1orf56,CD247,GZMM,CDC42SE1,PLEK,HOPX,CMC1,BIN2,IFITM2,NKG7,EFHD2,IFITM1,MYO1F,LINC00861,RAP1B,SPN,CYBA,TRDC,CST7,CD7,CTSW,XIST,DSTN,FLNA,ATM,ITGB2,XBP1,MATK,ID2,CCL4,PYHIN1,APMAP,AES,ABI3,LITAF,CD47,DHRS7,AKNA,GNG2,TXNIP,CCND3,RP11-640M9.1,PRMT2,XCL2,EMP3,OSTF1,DOK2,FAM49B,IL2RB,NEAT1,NDUFB7,CD164,JAK1,CCL3,ARL4C,MYL12A,DENND2D,SRGN,NDUFB2,CDC42,GIMAP7,C12orf75,CALM1,ANXA1,H3F3A,PPP2R5C,GZMH,GSTP1,ARPC2,SPP1,HMGN3,LIMD2,CD63,YWHAZ,ALOX5AP,CELF2,PSAP,SELENOT,CHST12,PFN1,ADGRE5,PCSK7,EIF3G,DBI,TCF25,PAXX,FTL,CTSD,SCP2,HCST,PRPF38B,LMAN2,UBB,RHOC,C11orf58,PPP1R18,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,Memory T-Helper_PMID_33711272,T cell,IL7R,FOS,CCR7,JUNB,SELL,TPT1,SOCS3,LTB,SNHG29,TCF7,PABPC1,GAS5,DUSP1,JUN,NOP53,NOSIP,DNAJB1,FXYD5,BTG2,NACA,ZFAS1,SNHG8,SLC2A3,EIF3E,SNHG5,RACK1,LDHB,TOMM7,SNHG6,SMDT1,EEF2,UBA52,ZFP36,NAP1L1,IER2,EIF3L,SARAF,ZFP36L2,BIRC3,FAU,RNASET2,BTF3,PFDN5,AC024293.1,OCIAD2,TSC22D3,KLF6,NPM1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,MX1-Hi CD8+ T cell_PMID_33711272,T cell,ISG15,IFI6,MX1,IFIT3,OAS1,IFIT1,IFI44L,ISG20,IFI35,LY6E,SAMD9L,IFI44,MX2,USP18,STAT1,XAF1,BST2,NT5C3A,GBP1,EPSTI1,TNFSF10,OAS3,IRF7,SAT1,MT2A,SAMD9,EIF2AK2,CMPK2,HELZ2,UBE2L6,OASL,TYMP,AC124319.1,PLSCR1,C19orf66,LGALS9,SP110,TRIM22,LAP3,PARP14,TAP1,APOL6,PSMB9,DRAP1,LAG3,C5orf56,IFITM2,IFI16,ADAR,SP100,COX5A,CXCL13,CHST12,IFITM1,IRF9,ODF2L,GBP5,SHISA5,GIMAP7,GBP2,CASP1,PSMB8,IRF1,RARRES3,UBC,CASP17P,MYL12A,CD164,GALM,CD48,TANK,GPBP1,GSTK1,RBCK1,GIMAP4,PSME2,EVL,PSMA5,CLEC2D,GSDMD,TSC22D4,GZMK,TMEM50A,VMP1,GIMAP1,ELF1,HCLS1,LYST,SUB1,WIPF1,MCL1,CARD16,C4orf3,PSMA2,HLA-C,PSMA4,TMSB10,HLA-E,HSPA8,CXCR3,SRSF7,HLA-A,CD2,ERP29,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,NKT_PMID_33711272,T cell,TRDC,ZNF683,HOPX,KLRD1,TRGC2,MATK,LINC01871,GZMB,XCL2,CD63,CTSW,CD7,ANXA1,CCL5,GNLY,PRF1,STOM,ID2,CD96,CD52,GZMH,CTSA,SOCS1,GYG1,CXCR6,LGALS3,GLIPR2,HCST,ALOX5AP,CD69,DDIT4,ZFP36L2,IL2RB,PGK1,CKLF,PIM1,IFNG,CTSD,CCL3,CLEC2B,GSTP1,ITGB1,GZMA,ITM2C,CD99,STK17A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,Plasma cell_PMID_33711272,B cell,IGKC,IGHA1,IGLC2,IGLC3,IGHG3,IGHG1,JCHAIN,IGHG2,IGHM,IGHG4,IGLL5,MZB1,IGLC7,DERL3,SSR4,XBP1,IGHGP,HERPUD1,PRDX4,FKBP11,IGLV6-57,IGLV3-21,CD79A,PIM2,SEC11C,HSP90B1,NEAT1,HSPA5,BTG2,JSRP1,FTL,SSR3,FCRL5,SPCS3,SDC1,IGLV3-1,SDF2L1,JUN,DNAJB9,MANF,ERLEC1,GAS6,ANKRD36BP2,SPAG4,PDIA4,LMAN1,MYDGF,AC012236.1,ANKRD28,PLPP5,FOS,HIST1H1C,PTP4A3,ITM2C,TENT5C,SELENOS,ATF4,SELENOK,POU2AF1,HSPB1,TPD52,CHPF,TNFRSF17,IGKV3-20,SELENOM,TXNDC15,CRELD2,UBE2J1,NUCB2,ST6GAL1,NPC2,DANCR,TMEM59,SPATS2,TXNDC11,NANS,SERP1,RPN2,IGKV4-1,FOSB,FKBP2,PSAP,SEL1L,SIL1,ERGIC3,CPEB4,CADM1,MEI1,SOCS3,TP53INP1,RRBP1,BRSK1,IER2,PAIP2B,SPCS2,MEF2C,GRN,GNG7,PABPC4,KDELR1,KCNN3,SYVN1,PDIA6,CYBA,PNOC,SEC14L1,TMED10,LY96,RPN1,HM13,CPNE5,SEC61A1,KLF13,ST6GALNAC4,TIMP1,CTSH,TSPAN13,CITED2,TRIB1,HSPA1A,PYCR1,HSPA1B,TOR3A,ARSA,HIST1H2AC,SEC61B,QPRT,GMPPB,HDLBP,CHID1,BLNK,SRPRB,TMED9,ALG5,EHMT1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,T-Reg_PMID_33711272,T cell,TNFRSF4,TNFRSF18,LTB,FOXP3,TBC1D4,CTLA4,CORO1B,S100A4,BATF,ICOS,TIGIT,IL32,PIM2,UGP2,DNPH1,LINC01943,PBXIP1,SPOCK2,ARID5B,CARD16,TRAC,GBP2,GLRX,CTSC,BIRC3,GCHFR,TNFRSF1B,SAMSN1,SAT1,CYTOR,PRDX2,FXYD5,SUSD3,CASP1,TMEM173,TSC22D3,PIK3IP1,C9orf16,ACP5,SIRPG,VMP1,UCP2,STK17B,GMFG,HSPA1A,ISG20,RGS1,ARPC1B,C4orf48,C12orf57,TRBC2,GTF3C6,HSPA1B,SLA,SKAP1,CHURC1,CYTIP,FKBP1A,ISG15,MYL6,GPX1,GBP5,PPM1G,JAK1,RAP1A,NDFIP1,CD3D,AC124319.1,MCL1,ENO1,ATP6V1G1,NDUFA4,PIM1,ARHGDIB,SH3BGRL,LGALS3,RGS10,SEPT6,PTTG1,RHOH,S100A6,IL7R,SCAND1,DUSP4,LCK,MALAT1,CD3G,VAMP5,TYMP,SOCS1,RHOC,CD27,CKLF,DNAJB1,ARL6IP5,OCIAD2,VAMP8,CACYBP,CALM3,ICAM3,YWHAB,TPT1,UQCRB,CHMP2A,UBE2D2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,41BB-Hi CD8+ T cell_PMID_33711272,T cell,TNFRSF9,CXCL13,CCL4,FXYD2,VCAM1,CRTAM,BIRC3,NFKBIA,PKM,CCL3,MIR155HG,FAM3C,LINC01943,GZMB,CD82,TIGIT,CD27,SOD1,HLA-DQA1,IFNG,RILPL2,LAG3,CD74,SYNGR2,CMC1,TSC22D1,HLA-DRB1,HLA-DRA,TNFRSF1B,DUSP4,HAVCR2,PARK7,ISCU,BATF,HLA-DQB1,PRF1,SH2D2A,SNAP47,CD7,PGAM1,IL10RA,ITM2A,HLA-DMA,TPI1,LSP1,NKG7,LTB,GALM,LITAF,UCP2,HSP90AB1,CTSW,PTMS,HLA-B,SLA,HSPB1,MFSD10,CCND2,LYST,IL2RG,HLA-DRB6,LBH,FABP5,CALR,CD2BP2,GBP2,RAB27A,ARL6IP5,FKBP1A,SEC61B,HLA-DRB5,EOMES,HLA-A,ZFP36L1,DUSP2,HLA-DPA1,VOPP1,PMF1,RAN,LAMP1,CLEC2D,RGS2,CFLAR,PDCD1,EZR,RBPJ,SEC11C,HSP90B1,COX17,CD2,CDK2AP2,SRGN,SELENOH,ATP5MC1,PTPN7,TMSB10,ANXA6,PHPT1,SEM1,EID1,ENO1,EDF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,41BB-Lo CD8+ T cell_PMID_33711272,T cell,TXNIP,ZFP36L2,ITM2C,CD69,GZMH,GIMAP7,SARAF,STK17A,ACAP1,CD52,STK4,KLF6,BTG1,CCL5,TSC22D3,RARRES3,MALAT1,CD48,PCSK7,GYPC,DUSP1,CD44,TOMM7,ALOX5AP,CD37,ANXA1,NOP53,CXCR6,UQCRB,GAS5,TBC1D10C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,Cycling CD8+ T cell_PMID_33711272,T cell,TUBA1B,STMN1,HIST1H4C,HMGB2,UBE2C,PCLAF,TYMS,TOP2A,H2AFZ,RRM2,MKI67,HMGN2,CKS1B,BIRC5,PCNA,CENPF,AURKB,CKS2,H2AFX,H2AFV,DUT,CDK1,ZWINT,TK1,NUSAP1,CCNA2,ASPM,KPNA2,ASF1B,MCM7,PTTG1,HMGB1,CDC20,CENPM,UBE2S,CDKN3,CCNB2,ANP32B,SMC4,MAD2L1,GTSE1,KIF22,SMC2,ARL6IP1,DEK,RAN,CCNB1,UBE2T,CLSPN,MXD3,KIFC1,VIM,CENPW,TUBA1C,TPX2,CENPU,CENPA,FEN1,RANBP1,PTMA,SPC25,JPT1,DTYMK,CDT1,TMEM106C,SLC25A5,MT2A,RAD51AP1,CDCA5,CDCA8,DLGAP5,DDX39A,LMNB1,GGH,SAE1,DNAJC9,NUDT1,HMGB3,MCM3,CENPN,NUF2,CDCA3,NUCKS1,FABP5,KIF20B,TPI1,CENPE,ANP32E,TMPO,RPA3,SAC3D1,HNRNPA2B1,AURKA,LSM5,TACC3,PPIA,CALM3,GINS2,SIVA1,TCF19,CDCA4,NASP,MZT2B,HJURP,FBXO5,CKAP2L,KIF2C,SRSF3,CCDC34,CALM2,H2AFY,SGO1,EZH2,SGO2,RRM1,RACGAP1,CARHSP1,MCM5,ACTG1,LSM4,USP1,SNRPD1,CDKN2D,CENPH,COX8A,RMI2,NDC80,HIRIP3,CENPK,SNRPB,CENPX,SLBP,RAD21,YWHAH,ENO1,ORC6,PHF19,TUBA4A,YBX1,PKM,GMNN,SRSF2,CDKN2C,CFL1,CDC25B,YEATS4,ZDHHC12,SSRP1,LDHA,ARPC5,SKA2,DHFR,DNMT1,ANAPC11,PSMC3,CRIP1,PFN1,YWHAQ,ATAD2,SNRPF,LGALS1,HMGN1,MAD2L2,PLP2,SNRPG,LSM3,ACYP1,HELLS,BANF1,IDH2,CXCL13,SMC3,EBP,HNRNPA3,BCL2L12,TALDO1,NUCB2,CBX5,ERH,C19orf48,ACOT7,PA2G4,RFC4,DCTN3,RALY,CDK4,SNRNP25,HNRNPAB,PSIP1,MZT1,RHEB,RNASEH2C,TFDP1,EIF4A3,TUBA1A,HNRNPA0,UBB,RBMX,SRSF10,BARD1
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,MX1-Hi CD8+ T cell_PMID_33711272,T cell,ISG15,IFI6,MX1,IFIT3,OAS1,IFIT1,IFI44L,ISG20,IFI44,IFI35,MX2,SAMD9L,LY6E,NT5C3A,USP18,EPSTI1,XAF1,BST2,OAS3,STAT1,TNFSF10,GBP1,SAT1,IRF7,CMPK2,EIF2AK2,HELZ2,SAMD9,PLSCR1,LGALS9,MT2A,IFITM1,SP110,AC124319.1,UBE2L6,TYMP,C19orf66,IFITM2,TRIM22,OASL,LAP3,PARP14,APOL6,FOS,TAP1,ODF2L,ADAR,C5orf56,DRAP1,JUNB,IFI16,SP100,IRF9,PSMB9,CD48,JUN,DUSP1,COX5A,GBP2,ALOX5AP,CD164,GBP5,CASP1,CHST12,SHISA5,MYL12A,GSTK1,IRF1,GPBP1,GIMAP7,ELF1,CASP17P,TANK,VMP1,UBC,RBCK1,RARRES3,PSMB8,WIPF1,EVL,GSDMD,C4orf3,CARD16,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,Progenitor Exhausted CD8_PMID_33711272,T cell,IL7R,GPR183,LMNA,NR4A3,TCF7,MGAT4A,CD55,AIM1,PER1,FOSL2,EGR1,TSPYL2,YPEL5,CSRNP1,REL,SKIL,PIK3R1,FOXP1,RGCC,PFKFB3,MYADM,ZFP36L2,USP36,TC2N,FAM177A1,BTG2,TSC22D2,FAM65B,STAT4,RGPD5,NEU1,IFRD1,PDE4B,NR4A1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,Terminally Exhausted CD8_PMID_33711272,T cell,NKG7,RAC2,CLIC1,GZMA,PRF1,APOBEC3C,RHOA,CCL4,COTL1,PSME2,HLA-DPA1,HMGN2,LSP1,PSMB9,LCK,SRP14,ARPC3,ARPC1B,TPI1,APOBEC3G,HLA-DPB1,LDHB,ATP5G2,MYL12B,PSMB8,PSMA7,HLA-DRB1,SUB1,ARPC4,CTSW,SUMO2,TAP1,GZMB,RARRES3,CAP1,UCP2,PPIB,RAN,CHCHD2,PARK7,HCST,GABARAP,HLA-DRA,SOD1,CAPZB,S100A4,RNASEK,PPP1CA,PKM,IFI16,ACTR3,ITM2A,SLC25A5,PGAM1,ANXA6,CD27,ATP5B,LYST,PSMB10,MIF,LY6E,ANKRD10,CTSD,UBE2L6,EDF1,NONO,TIGIT,FKBP1A,IL2RB,HMGN1,ATP5L,GZMH,STAT1,GPI,LCP2,GBP2,ARL6IP5,CCL4L1,PRDM1,OST4,PDCD1,HINT1,HNRNPF,GBP5,COX7C,ARPC5,GIMAP4,XRCC6,C17orf62,PRR13,HLA-DRB5,WDR1,ARL6IP1,ISG15,ATP5A1,EWSR1,COPE,HAVCR2,EIF3H,ANXA5,C11orf58,IFI6,SIRPG,CALM3,SHISA5,DENND2D,MAP4K1,BUB3,IKZF3,SNRPB,EID1,PSMB1,PTPN6,NDUFA13,SSR4,COX8A,PTPN7,MAT2B,PSTPIP1,GSTP1,PSMB3,IRF9,TRAF3IP3,GIMAP7,PSMA2,SASH3,CD164,ETNK1,S100A11,KLRD1,MOB1A,SH2D1A,UBE2V1,SH3KBP1,ATP5G3,PSMA5,MT2A,LAT,IFNG,RAB27A,COX5A,DDOST,PSMB4,SRP9,BRK1,TNFRSF1B,EIF4H,GMFG,ANXA2,TCEB2,RBPJ,COX6A1,UBXN1,PSMD8,CD63,ATP6V0E1,NDUFB8,CTSC,SNRPD2,ATP5C1,PRELID1,COX7A2,PSMA6,ECH1,U2AF1,HMGB2,FAM49B,CD38,TSPO,IDH2,CASP4,CCL3,TRMT112,SURF4,PSMA1,YWHAE,LASP1,PYHIN1,ANAPC16,CSNK2B,PRKAR1A,SLAMF7,GNG5,PRDX1,RQCD1,CCNDBP1,INPP4B,CDK2AP2,CBX3,RPN1,SPCS1,PSMA3,SIT1,XRCC5,EIF3C,CXCR6,COX6C,M6PR,ANP32E,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,ICB-Exposed 41BB-Lo CD8_PMID_33711272,T cell,SIRPG,PDCD1,CXCR3,CXCR6,SIT1,IFNG,LCK,PRF1,CD27,GZMH,CXCL13,LINC01943,ITGB7,MIR155HG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,CD16- Monocyte_PMID_33711272,Monocyte,S100A8,S100A9,VCAN,FCN1,S100A12,TIMP1,LYZ,S100A6,AC020656.1,S100A4,CSTA,CD52,MNDA,C15orf48,SLC2A3,BCL2A1,HSPA1B,FOS,HSPA1A,PLAC8,HSP90AA1,SMIM25,S100A10,SOCS3,SLC25A37,H3F3B,SH3BGRL3,VMP1,JUND,NEAT1,LCP1,CD55,STXBP2,DUSP1,LY6E,CARD16,LDHA,IER2,ASGR1,HNRNPU,HSPB1,IFITM2,PFDN5,MPEG1,ELOB,HCST,ISG15,AP1S2,CLEC4E,FN1,ATP5MPL,H3F3A,IFITM3,NDUFB11,GMFG,RGS2,TNFSF10,LST1,SEC61G,JAML,LAMTOR4,LSP1,CEBPB,DAZAP2,CD44,EMP3,EIF1,POLE4,TPI1,TXNIP,ATP5MC2,FGL2,PRELID1,COTL1,CYBB,SERPINA1,CTSS,APRT,EIF3M,SUB1,PSMB3,TMA7,C4orf3,PTPRC,GSTP1,LGALS1,FKBP1A,TKT,PTMA,POLR2L,AIF1,CORO1A,CDC42,ATP5ME,MYL12B,HMGB2,COX7A2,TSPO,ATP5F1D,COX7B,AP2S1,PLIN2,BTG1,SERP1,CCNL1,ENO1,ATP5F1E,FAU,COX6B1,ZFAS1,COMMD6,UQCRH,PSME1,UBA52,HSPD1,YWHAZ,SRGN,PAPOLA,MYH9,CYBA,CBX3,SERF2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,CD16+ Monocyte_PMID_33711272,Monocyte,IFITM2,CD52,SMIM25,FCN1,LST1,IFITM3,TIMP1,STXBP2,S100A4,NAP1L1,LILRA5,VMO1,LILRB2,CYTIP,COTL1,CD55,CARD16,CD48,RHOC,CRIP1,TCF7L2,EVI2B,CTSS,IFITM1,S100A6,LY6E,RIPOR2,ICAM3,FAM110A,CORO1A,LYST,BCL2A1,CFD,SPN,FGR,TKT,CDKN1C,CEBPB,APOBEC3A,GMFG,MTSS1,HES4,STK17B,LRRC25,C19orf38,LIMD2,PTPN6,NFKBIZ,RAC2,UTRN,DUSP6,PTPRC,FCGR3A,PPDPF,TESC,OAS1,MYO1G,RAP1B,UQCRB,PILRA,NAAA,VASP,AIF1,TSC22D3,POU2F2,CD79B,PLAC8,SERPINA1,PTP4A2,TNFSF10,BID,CASP1,LYN,MS4A7,CD37,CPPED1,TNFRSF1B,CLEC12A,LTB,ADGRE2,LILRA1,MAPKAPK3,ITGA4,CD300E,ABRACL,RGS18,SEPT9,DOK2,ICAM2,PRELID1,RNF144B,GIMAP2,VSIR,HCK,LTA4H,MTPN,TRAF3IP3,H3F3A,WARS,WSB1,NCF2,DRAP1,RABGAP1L,LRRFIP1,NACA,FAM45A,FKBP1A,CNIH4,S1PR4,SCIMP,LSP1,BIN2,CUX1,SPI1,SNAPC3,CMTM6,PRAM1,FLNA,EMP3,MYO1F,ABI3,SELPLG,UNC119,MPEG1,FGD2,GCH1,MARCKSL1,RASGRP2,TBC1D10C,RSRP1,CDC42EP3,NEAT1,ADGRE5,GNG2,NUP214,PFDN5,WAS,DPEP2,PAG1,ZFAND5,MYD88,CDC42,LILRA2,LSM6,ZFAS1,ZEB2,CLEC7A,KLF4,RNF149,STMP1,CX3CR1,LCP1,C1orf56,NKTR,GDI2,LILRB1,SNX18,KLF2,DOCK5,PSMB10,STX11,PRKCB,TLE4,GPSM3,ISG15,SLC25A6,NOTCH2,CAT,FOXP1,GSTP1,EVL,GCA,CD300LF,LYL1,PCGF5,AP2A1,SRSF5,MBD2,SMAP2,EIF1,PSMB9,ACAA1,MYL12A,IRAK3,ELOB,CSTA,CDC42SE1,ARL6IP4,KYNU,GIMAP7,CCND3,XIST,FLI1,CELF2,ARRB2,FAM49A,SOD1,HIGD2A,MALAT1,RHOG
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,CD1C+ DC_PMID_33711272,Dendritic cell,FCER1A,CLEC10A,CD1C,PLAC8,NAPSB,PPA1,CXCR4,HERPUD1,CD1E,PKIB,NDRG2,LSP1,HLA-DQA2,ZFP36L2,PLD4,HLA-DPB1,GAPT,YWHAH,OGFRL1,JAML,HLA-DQB1,JUN,SNHG5,CKLF,COTL1,LGALS2,GAS5,PAK1,HSPA1B,EIF3L,FCGR2B,TSC22D3,CSF2RA,HLA-DPA1,DDIT4,HNRNPA1,STK17B,C12orf45,ICAM3,IL13RA1,AXL,RNASE6,PHACTR1,TMEM109,STK17A,HSPA1A,SEPT6,SPINT2,ACTG1,TAX1BP3,HLA-DQA1,ACAP1,MTDH,KCNMB1,RACK1,ELMO1,DNAJB1,EIF3F,PDLIM7,BTF3,NACA,GDI2,SUSD3,NOP53,CD1D,CXorf21,AC114760.2,ARF6,PABPC1,HMGN1,REL,FBL,IL2RG,HLA-DRA,PLP2,COMMD6,CNN2,C1orf162,HMGA1,TPT1,C15orf48,ZNF791,GSN,APEX1,CD83,CLNS1A,TUBA1A,GABPB1-AS1,NPM1,PEA15,CORO1A,SUB1,AP1S2,IER2,SNHG29,JUNB,AC008038.1,TRABD,ALDH2,ETS2,TMEM273,STK4,KCNK6,PTRHD1,LAT2,CYTIP,EIF3G,RGS10,TMEM14C,HSPA8,CSF3R,EIF3E,HCLS1,PTMA,ENTPD1,BIN1,EIF3H,AC024293.1,LIMD2,VIM,MEF2C,VASP,H2AFY,FMNL1,RGS1,SKIL,DDX5,SMAP2,SARAF,MNDA,ELOVL5,DCK,EEF2,PRCP,NAP1L1,IL16,UBA52,COPS3,EIF3M,AC004687.1,BASP1,FOS,ITGB2-AS1,RGS18,OTULINL,PPHLN1,SEPT7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,CLEC9A+ DC_PMID_33711272,Dendritic cell,IRF8,WFDC21P,RGCC,NAPSB,BIRC3,TXN,IDO1,IRF7,LGALS2,CLEC9A,LSP1,MARCKSL1,SNX3,DNASE1L3,TSPAN13,BCL11A,SPIB,HSPA1A,CPVL,C1orf54,CLIC3,SOX4,SLC20A1,CPNE3,ID2,MALAT1,TCF4,PTPRE,SERPINF1,SUB1,CD83,CST3,SERPINF2,NAP1L1,HSPA1B,TAGLN2,SEC61B,PPA1,BTG2,WDFY4,CCND1,AC004687.1,NAAA,CLNK,ISG20,UGCG,XCR1,C12orf45,PPP1R14B,SLAMF7,CDKN1A,SELL,ACTG1,KCNK6,MPEG1,CXCR3,SELENOS,SNHG5,ENSA,PLP2,GSTP1,OFD1,APP,ASB2,ACAP1,SERPINB9,HLA-DOB,HIST2H2AA3,PPM1K,C1orf21,HINT1,MAP3K13,DAPP1,BATF3,ANKRD12,PPP1R15A,FLT3,PLEK,SPCS1,REPIN1,RAB11FIP1,NSMCE1,PARK7,NET1,HSP90AA1,RHOF,TAP1,RGS10,PAXX,CRIP1,BTLA,SNX22,ZNF366,CSF2RA,PTRHD1,STK4,SEPT6,VIM,LIMD2,MCOLN2,STMN1,IDH3A,SELPLG,CYB5R3,BASP1,CLIC2,P2RY6,PABPC1,NUB1,FNBP1,TUBA1C,DANCR,PTPN7,CNN2,GNG7,CDK2AP2,ANXA6,VAC14,FOSB,SNHG29,PNISR,MZT2A,TMEM14A,SHTN1,UCP2,SERPINB1,S100A10,GAS6,LCP1,SOCS1,DBNL,DNAJB1,NACA,MCM5,ZFAS1,EIF3L,SPINT2,RBM25,PLPP1,EHD4,CFLAR,CCDC12,SMIM14,IL2RG,ETV6,ICAM3,CCDC88A,HLA-DPB1,DDX5,GABARAPL2,SULF2,NDUFC2,PFDN2,HSPA8,STK17A,BUD23,SNHG7,DENND1B,YPEL5,MYL12A,NDRG2,HMGA1,LYRM4,SRSF8,UBB,SFT2D2,BID,PPP1R12A,SNHG6,UNC119,RAB7A,LUC7L3,TSTD1,SRSF2,IKZF1,NUP210,IL16,TMSB4X,KLF6,TIMM17B,PSMB9,CCNG2,ST3GAL5,EIF3D,SLC1A5,PTPN2,BCL2L11,POLR2J3.1,PTGES2,CCND3,ASAP1,BAZ1A,CD74,ATG101,PTMA,MYL6,HLA-F,UBL7,EIF1,IFT20
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,CXCL10-Hi TAM_PMID_33711272,Macrophage,CXCL10,CXCL9,CXCL11,GBP1,ISG15,GBP4,IFIT3,IL32,PLEK,IL4I1,SOCS1,GBP5,STAT1,CALHM6,IFIT2,RARRES3,SOD2,VAMP5,TAP1,ANKRD22,LAP3,MX1,IDO1,SNX10,PSME2,TNFSF10,PRDX1,APOL3,WARS,MARCKS,C1QB,SERPING1,EPSTI1,IRF1,C1QA,IFI6,PARP14,TMEM176B,C1QC,MT2A,AC005515.1,IFI27,CCL3,SLAMF7,IFI35,ATF5,CD40,HAPLN3,UBD,IFI44L,GBP2,UBE2L6,TNFSF13B,FCGR1A,CTSC,TYMP,BST2,SMCO4,TMEM176A,ICAM1,SAMD9L,AC124319.1,EBI3,HLA-A,ATOX1,CD38,ISG20,PLEKHO1,PSMB9,GCH1,SLAMF8,LY6E,CTSZ,SPPL2A,MDK,NFKBIA,DYNLT1,TNFAIP2,TXN,LGALS3BP,GRINA,ACP2,BAZ1A,DRAM1,SLC31A2,IFITM3,SELENOS,PSMB8,CD72,LILRB4,PPA1,AKR1A1,OLFML3,OAS3,RASSF4,HLA-DQA1,IFNGR2,FCGR1B,VOPP1,NR1H3,SCPEP1,MSR1,GSN,CD63,PSMA4,HLA-B,GIMAP4,XAF1,POMP,NINJ1,CTSH,PSMA3,NT5C3A,PDIA3,UBE2L3,FYB1,SP110,TMSB10,SNX6,HLA-C,CAPZB,CBR1,TIFA,HLA-DRB1,NMI,APOL2,SRI,CNDP2,SQOR,FGD2,DBI,IL18,C3AR1,IGSF6,LYN,TFEC,PLA2G16,FMNL2,APOL6,NAGK,HLA-E,ST3GAL5,GPR65,PSMA2,IRF7,NCF1B,CALR,LACTB,ZNFX1,CD74,TAP2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,Cycling TAM_PMID_33711272,Macrophage,HIST1H4C,STMN1,H2AFZ,PCLAF,HMGB2,UBE2C,HMGN2,TUBA1B,CKS1B,TOP2A,PTTG1,HMGB1,MKI67,TK1,CDK1,TYMS,BIRC5,CENPF,PCNA,CKS2,RRM2,KPNA2,NUCKS1,H2AFV,SMC4,CDKN3,TUBA1C,AURKB,DUT,ARL6IP1,H2AFX,ZWINT,RANBP1,NUSAP1,CENPM,DEK,CDC20,RAN,RPA3,GTSE1,HMGB3,DTYMK,SMC2,PTMA,MZT2B,CCNB1,CLSPN,TMEM106C,MAD2L1,CENPW,CCNB2,IDH2,CENPX,ASPM,ANP32B,RAD51AP1,PHF19,CDKN2C,GGH,ALOX5AP,LSM4,HMMR,HNRNPA2B1,LMNB1,ANAPC11,CCNA2,ANP32E,MCM7,CEP55,DDX39A,NASP,RHEB,PKM,ENO1,SIVA1,CARHSP1,NUF2,PLK1,LSM5,SKA2,PRC1,SNRPG,TPX2,FEN1,CKLF,TMPO,SPP1,CENPE,SRSF3,SRSF2,ASF1B,DHFR,HIST2H2BD,FAM111A,HAMP,PA2G4,USP1,SNRPD1,SGO2,HMGN1,AURKA,PARP1,SET,DNAJC9,UBE2S,LDHA,CKAP2,SNRPB,GMNN,CENPK,KIF20B,BUB3,CDCA3,CENPU,DNMT1,TIMM10,HNRNPAB,SNRPF,CHCHD2,ZDHHC12,TACC3,CENPA,LSM3,UHRF1,SNRNP25,TPI1,PLP2,SHCBP1,KIFC1,COX8A,CKAP2L,CALM2,HSP90AA1,MZT2A,HELLS,HSPE1,PTGES3,PSMC3,TMED9,PPIA,RNASE2,NUDT1,HMGA1,PGAM1,DLGAP5,RRM1,SAC3D1,KIF11,DCK,TROAP,SRP9,BANF1,CCL2,CDCA5,NME1,AP2S1,SMC1A,TFDP1,KIF22,SRSF10,ATAD2,SNRPE,SLC25A5,UQCC2,PCED1B-AS1,VDAC3,SGO1,SFPQ,CALM3,SAE1,H1FX,YWHAH,MCM5,SMC3,SPC25,RACGAP1,UQCRQ,CCDC34,NDC80,YWHAQ,HNRNPH1,LDHB,MND1,TUBA1A,CDC25B,UBE2T,CFL1,MYBL2,ORC6,HNRNPD,XRCC6,PFN1,SLBP,CDT1,PDIA6,FDPS,TMEM109,SDF2L1,RAD21,HNRNPA1
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,FOLR2-Hi TAM_PMID_33711272,Macrophage,SELENOP,FOLR2,PLTP,C1QC,F13A1,C1QB,C1QA,GGTA1P,APOE,MS4A4A,CD14,SLC40A1,MS4A7,SLCO2B1,C3,LGMN,TMEM176B,SERPING1,CXCL12,CREM,GPR34,IL2RA,DAB2,TMEM176A,C2,A2M,MDK,CD74,CTSC,CD163,IFI27,MSR1,FCGRT,AKR1B1,MAF,VSIG4,HLA-DQA1,PLD3,STAB1,CD59,MAFB,CPM,MS4A6A,MARCKS,LGALS3BP,LTC4S,FCGR3A,FCGR2A,ADAP2,HLA-DRB1,C5AR1,FUCA1,GYPC,RB1,HLA-DRB5,GADD45B,HLA-DMB,CREG1,GAL3ST4,LPAR6,SDS,SLC1A3,ARL4C,HLA-DMA,SNX6,ITM2B,HLA-A,HLA-DQB1,FRMD4A,GOLIM4,HLA-DRB6,HLA-DPA1,SAMSN1,ZNF331,CD72,HLA-DOA,LIPA,PRXL2A,KCNMA1,SPATS2L,GAS6,ADAM28,OLFML3,HLA-DRA,BST2,RGS1,CSF1R,ALDH1A1,ZFP36L1,ELL2,LY96,AXL,LAIR1,GPR155,EPB41L2,MFSD1,TCF4,HLA-E,PMP22,LILRB4,PFKFB3,CREBL2,ISCU,HLA-DPB1,CD81,DOCK4,SCIN,ABCA1,PSAP,ITGAV,LAPTM4A,AP2A2,BMP2K,HEXA,NINJ1,FCHO2,RASSF4,VMO1,HIF1A,SAT1,RAP2B,TTYH3,IL18,LRP1,SDCBP,SGPL1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,GPNMB-Hi TAM_PMID_33711272,Macrophage,NUPR1,GPNMB,APOC1,CTSD,CSTB,FTL,LGALS3,SPP1,CTSL,RNASE1,FABP5,ACP5,GCHFR,VIM,MT1X,HMOX1,LGMN,LGALS1,APOE,CTSB,LIPA,IFI27,SCD,CAPG,CYP27A1,GLUL,CTSZ,GM2A,MARCO,PLD3,PLIN2,MT2A,TXN,CD9,PRDX1,RGCC,BRI3,PSAP,CD63,ANXA2,PLA2G7,CD59,NPL,CD68,FTH1,DAB2,CHCHD6,VAT1,ASAH1,KCNMA1,TREM2,FUCA1,OTOA,DBI,LAMP1,ATP6V1F,NR1H3,ATOX1,MIF,SOD2,SDS,HK2,CD81,RAB42,CREG1,ALDH1A1,OTOAP1,SMS,CPM,FBP1,PMP22,FNIP2,TIMP2,TSPAN4,LMNA,MGST3,HAMP,SDCBP,S100A10,BLVRB,FN1,PPDPF,AC020656.1,DNASE2,CTSA,FDX1,IL4I1,HSPB1,S100A11,EMP3,SNHG12,SQSTM1,ACP2,ABCA1,MPP1,CFD,NOP10,A2M,MGLL,TFRC,RALA,MSR1,BCAP31,GYPC,IGF2R,PDE4DIP,FTLP3,RMDN3,GRN,KLHDC8B,SOAT1,CORO1C,AKR1B1,C15orf48,HSD17B14,APLP2,SMPDL3A,TCN2,SNX10,ATF5,LHFPL2,GSTO1,CD99,CD84,NINJ1,NRP2,OLR1,CYSTM1,SLC38A6,MMP14,RRAGD,CALM3,TTYH3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,VSIR-Hi TAM_PMID_33711272,Macrophage,HERPUD1,YWHAH,RGS1,CXCR4,PLD4,BTG1,HLA-DPB1,HLA-DPA1,OLFML3,ZFP36L2,ALOX5AP,GSN,JUN,PKIB,HLA-DRA,HLA-DRB5,HLA-DQB1,GAS5,NAPSB,HNRNPA1,CSF2RA,PPA1,ACTG1,FPR1,ALDH2,HLA-DRB1,CEBPD,VSIR,GAPT,HLA-DQA1,CD9,PADI2,APEX1,NPC2,ZFP36,TXNIP,C3,RACK1,LTC4S,DDIT4,SEC11A,DUSP1,CTSH,EEF2,IFNGR1,TMEM173,RGS10,ARHGDIB,LDHB,TUBA1B,PPT1,AC008038.1,RAC1,LAT2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,M1 Curated_PMID_33711272,Macrophage,AK3,ANGPT2,APOL1,APOL2,APOL3,APOL6,ATF3,BCL2A1,BIRC3,CCL15,CCL17,CCL19,CCL20,CCL22,CCL5,CCL8,CCR7,TNFRSF1B,FCGR3A,SIGLEC1,FCGR2A,CD80,CD86,CH13L2,CSPG2,CX3CL1,CXCL10,CXCL11,CXCL13,CXCL9,ECGF1,EDN1,FAS,FCGR1A,FCGR1B,GADD45G,GBP1,HESX1,HLA-DPB1,HSD11B1,HSXIAPAF1,IGFBP4,IL12A,IL12B,IL15,IL15RA,IL1B,IL23,IL23A,IL2RA,IL6,IL7R,INDO,INHBA,NOS2,IRF1,MARCO,OAS2,OASL,PBEF1,PDGFA,PFKP,PLA1A,PSMA2,PSMB9,PSME2,PTX3,SLC21A15,SLC2A6,SLC31A2,SLC7A5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,M2 Curated_PMID_33711272,Macrophage,ADK,ALOX15,ARF7,ARG1,CA2,CCL12,CCL13,CCL14,CCL18,CCL2,CCL23,CCL26,CCL3,CCL4,CCL6,CCL7,CCL9,CD163,CD1A,CD1B,CD200R,CD204,MSR1,MRC1,CD36,CERK,CHN2,CLEC4A,CLECSF13,CTSC,CTSD,CXCR4,DCL-1,CD209,CLEC7A,EGR2,F13A1,FCER2,FGL2,FN1,GAS7,GPR86,HEXB,HNMT,HMOX1,HRH1,HS3ST1,HS3ST2,IDO1,IGF1,IL10,ILIRN,IL27RA,LIPA,LTA4H,LYVE1,MAF,MS4A4A,MS4A6A,P2RY14,P2RY5,PPARG,SEPP1,SLC21A9,SLC38A6,SLC4A7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma,33711272,ICB-Exposed TAM_PMID_33711272,Macrophage,VSIG4,CXCL9,SIGLEC10,FCGR1A,TMIGD3,NAPSB,CXCL10,CALHM6,CD163,ASCL2,CLEC12A,SECTM1,SLAMF8,SCIMP,CLEC4E,PTAFR,MNDA,ADORA3,FGL2,HLA-DQB2,ADAMDEC1,FBP1,ANKRD22,MARCO,IGSF6,HAMP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,TAM ISGhi population_PMID_33861994,Macrophage,IGFBP7,IGFBP3,SPARCL1,MGP,PLVAP,ENPP2,RGS5,SPARC,IGFBP5,TIMP3,PPAP2A,RAMP2,EPAS1,VWF,ACTA2,TM4SF1,BGN,CRIP2,CALD1,ADIRF,PPAP2B,PRSS23,TAGLN,FLT1,ESM1,EMCN,GNG11,HSPG2,MYL9,APP,FCN3,BCAM,AQP1,SLC9A3R2,ID3,IFI27,SDPR,RAMP3,TSC22D1,ID1,PLAT,ESAM,SPRY1,IFITM1,CAV1,COL4A2,THY1,ANGPT2,SPTBN1,CD59,CLDN5,GPR116,NDUFA4L2,CLEC14A,IGFBP4,ENG,EGFL7,TPM2,PTRF,C10orf10,A2M,GJA4,STC1,INSR,CTGF,NPDC1,MT1M,ADAMTS1,LDB2,CNN3,RGCC,COL4A1,IFITM3,CD34,PDLIM1,ITGB1,FAM167B,TMEM204,SEPW1,CRHBP,ELTD1,DSTN,COL18A1,SLCO2A1,PODXL,HES1,TMEM88,TINAGL1,MT1E,UACA,CYR61,ECSCR,PTPRB,FAM107A,HYAL2,CLEC3B,MCAM,APOLD1,MAP1B,S1PR1,TPM1,LHFP,GJA1,STOM,ARHGAP29,SOCS3,MT2A,EFNB2,MYH11,CALCRL,VWA1,KDR,MYLK,PHLDA1,EFNA1,JAG1,MARCKSL1,TM4SF18,NGFRAP1,CDH5,EDNRB,TGFBR2,NFIB,PRKCDBP,S100A16,IL6ST,SELM,NOTCH4,FRZB,TCF4,DARC,SERPINH1,C12orf57,SYNE2,RAB13,CD151,TGM2,PLAC9,F2R,COL6A2,ITM2C,LRRC32,PPFIBP1,TSPAN7,MFGE8,HEG1,WWTR1,RBP7,TJP1,LAMB2,CYYR1,CRIM1,LIMS2,PDGFD,AKAP12,PGF,BTNL9,EDN1,TMEM47,SOD3,LIFR,RBPMS,LIMCH1,CYB5R3,GSN,MMRN2,CAV2,CPE,RASD1,CCDC85B,ROBO4,COX7A1,SPOCK2,MATN2,PIK3R3,ITGA1,ZEB1,KLF9,C8orf4,F8,FZD4,SLC2A3,PLS3,TIE1,LMNA,GEM,ECE1,FSTL1,CA2,CLIC4,SERTAD1,S100A13,INHBB,MEIS2,PPP1R14A,MIR4435-1HG,FKBP1A,PALMD,HTRA1,DLL4
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD8A+ Exhausted_PMID_33861994,T cell,CD27,CCL3,HAVCR2,VCAM1,MIR155HG,SIRPG,LAG3,TNFRSF9,PDCD1,GZMK,CD74,CD8A,SNAP47,UBE2F,TOX,LYST,FAM3C,AC069363.1,CCL5,LINC00158,TTN,CD200R1,PCED1B,BST2,FABP5,ANKRD32,PSMB9,PARK7,CCDC141,LIMD2,RARRES3,STAT1,PSME2,IL2RG,UBE2L6,ETV1,PSMB10,GIMAP4,SEMA4A,ARPC5L,CSF1,FKBP1A,HLA-A,FAF1,CCL3L3,BATF,SHFM1,EPHX2,HLA-G,DRAP1,TRAF3IP3,C11orf31,UCP2,TOX2,GBP5,SH2D2A,IL32,ARL6IP5,ATP6V0E1,PSMB8,AP001055.6,COPZ1,IFI27L2,CLEC2D,GIMAP7,CD70,CDK2AP2,LSP1,NDUFC1,RAB1B,DNPH1,WDR83OS,PRDX3,CD63,VOPP1,PKM,SRI,PHPT1,CD3E,GIMAP5,LCP2,NDUFAF3,SCAMP2,SH3KBP1,LBH,CLTA,KDELR2,FYB,CD7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD8A+ Exhausted IEG_PMID_33861994,T cell,BAG3,DNAJB1,ZNF331,HSPA1B,HSPH1,HSPA1A,DUSP4,SERPINH1,HSPA6,CREM,RGS2,ZFAND2A,HSP90AA1,NR4A1,ATF3,HSPD1,DNAJA1,PMAIP1,HSPE1,NR4A2,CACYBP,HSP90AB1,HSPB1,PHLDA1,IFNG,CRTAM,DUSP1,DNAJB4,RGS1,BPGM,DUSP2,PPP1R15A,RHOB,GEM,TTN,DEDD2,TNFAIP3,CYCS,HSPA8,VCAM1,NEU1,TSPYL2,CDKN2C,VPS37B,FKBP4,HMOX1,YPEL5,GLA,AHSA1,UBC,JUNB,BTG3,CHORDC1,TNFSF9,ID3,ICOS,RNF19A,ANKRD37,PTP4A1,PRRG4,SERTAD1,IFRD1,LYST,SRSF7,CKS2,PPP1R2,HNRNPLL,CTLA4,TUBA1A,FOSB,CLK1,NAMPT,MYADM,TSC22D1,BTG2,SQSTM1,HSPA4,ENC1,CD200R1,HERPUD1,JMJD6,STIP1,TMEM2,UBB,SAT1,EIF5,STX11,CTNNAL1,SDCBP,NAB1,SOD1,HAVCR2,FAM46A,PELI1,MAP3K8,DDIT3,ZFAND5,BCAS2,PMCH,FOS,SGK1,SIK1,FAM3C,SLA,CCDC141,ARL4D,DOK2,STAT3,BRD2,DNAJA4,FAM46C,AZIN1,PRDM1,NR4A3,TP53INP1,JUND,PLIN2,RHBDD2,CSRNP1,ZC3H12A,JUN,BIRC3,DNAJB6,SNX9,MCL1,HBP1,B3GNT2,RANBP2,ITPRIP,MAP1LC3A,CDC42EP3,BANP,STK17B,RHOH,GPBP1,RALGAPA1,NPIPB5,SLC38A2,DDX3X,FLNB,DUSP10,INSIG1,SELK,KLF6,TGIF1,MBNL2,TOPORS,CBLB,H3F3B,HOOK2,MYLIP,ZEB1,NFKBIZ,IDI1,CDKN1B,DNAJB9,GK,UBE2B,ZNF10,FAM53C,IRF4,DNTTIP2,PFKFB3,MB21D1,HLA-DQA2,AHI1,TMEM155,AMD1,ARL4A,ELF1,TMEM66,AC069363.1,MIR24-2,TRPC4AP,HLA-DRB5,CCDC117,TRIM26,CLDND1,EIF2AK3,PER1,TERF1,ARID5B,NFKBIE,H2AFX,LGALS1,DUSP16,TAGAP,EIF4A2,GADD45G,KDM2A,CSNK1G3,SERTAD3,SYTL3,OAT,EPC1,CCDC64,ADTRP,RASGEF1B,RAB11FIP1,IL6ST
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD8A+ Proliferating_PMID_33861994,T cell,STMN1,TUBA1B,TYMS,RRM2,UBE2C,MKI67,KIAA0101,HMGN2,TOP2A,HMGB2,NUSAP1,CENPF,FABP5,FXYD2,HLA-DRB5,CXCL13,LGALS1,PKM,HLA-DRA,HIST1H4C,ASPM,HLA-DQA2,CDK1,PTTG1,TPX2,PCNA,CENPM,CCNA2,ASF1B,HLA-DQA1,ZWINT,TK1,H2AFZ,MCM7,CLSPN,HIST1H1B,H2AFV,CKS1B,HLA-DRB1,DUT,BIRC5,SMC4,CALM3,UBE2T,SNRNP25,CDKN3,CDC20,CENPU,MCM5,HLA-DQB1,SMC2,TMPO,TNFRSF9,CD74,HIST1H3B,MAD2L1,RANBP1,TMEM106C,CCNB2,CENPW,AURKB,CARHSP1,KIFC1,HMGB1,FEN1,LMNB1,PGAM1,CCDC167,EZH2,PRDX3,KIF22,COTL1,RAN,CKAP2L,CKS2,DHFR,TPI1,TPM4,NUDT1,HLA-DMA,MT1E,DUSP4,H2AFX,KPNA2,GINS2,ACTG1,CDCA8,H2AFY,MT2A,VIM,CASC5,CDCA3,MCM3,HMGB3,HN1,ARPC5,COX8A,DEK,FKBP1A,DNPH1,ENO1,PKMYT1,ANP32E,GGH,ANP32B,TUBA1C,GTSE1,RRM1,CDCA5,ATAD2,DTYMK,PARK7,CAV1,NCAPH,HIST1H1E,XCL1,PLK1,BLVRA,RACGAP1,CD82,SAE1,GNG5,PTMS,NUCB2,ITM2A,NCAPG,SIVA1,CCNB1,NUF2,HELLS,FANCI,TALDO1,MIR155HG,HLA-DPA1,ANXA5,HIST1H3C,RAD51AP1,DLGAP5,CCDC34,RNASEH2A,PHF19,CD70,MTHFD2,CENPN,KIF23,DNMT1,LAG3,HIST1H1C,DDX39A,CDK2AP2,PHPT1,CBX5,MCM6,SNRPD1,PSMB3,RBX1,COX5A,NUDT21,ATP5G3,BANF1,SUB1,PRDX1,SLC25A5,HIST1H2AL,HJURP,NASP,CAMK1,NRM,SEC11C,HMMR,PFN1,PSMB2,STRA13,ANAPC11,ARL6IP1,RAMP1,MYL6B,TCF19,MCM4,APOBEC3B,SNRPB,RAD51,PDIA6,NEIL3,TXNDC17,HIRIP3,VDAC1,HMGN1,CENPE,BARD1,FAM111B,HIST1H2AG,BAX,PSMC3,PRC1,WDR1,HSPD1,KIF11,BHLHE40-AS1,EIF5A
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD8A+ Tissue-resident_PMID_33861994,T cell,IL7R,CD69,ANXA1,ZFP36,FOS,TSC22D3,SLC2A3,ZFP36L2,FOSB,CITED2,JUNB,KLF6,JUN,TNFAIP3,CXCR4,CCNH,DUSP1,FAM177A1,BTG1,IER2,RGCC,GADD45B,ZNF683,BTG2,YPEL5,TUBA4A,LMNA,CAPG,GLUL,PDE4B,LEPROTL1,FKBP5,CYTIP,FAM46C,SERTAD1,PPP1R15A,TNF,CD44,CSRNP1,EML4,TMEM66,PTGER4,REL,CDKN1A,GPR183,FTH1,RGS1,CAMK4,SAMSN1,GABARAPL1,ZNF331,DNAJA1,CD55,MYADM,MTRNR2L12,JUND,LINC-PINT,NR4A3,PIK3IP1,NFKBIA,DNAJB1,AIM1,SCML4,PARP8,EGR1,TSPYL2,TAGAP,PFKFB3,GLIPR1,AMICA1,HIST1H4C,SLC7A5,PDCD4,EIF1,NCF1,PIK3R1,VIM,PER1,NR4A1,FAM102A,SRGN,RORA,TMEM2,SAT1,CCL4,TIPARP,TXNIP,TPT1,ARL4A,STAT4,LDLRAD4,PERP,MARCKSL1,HSPH1,CTA-29F11.1,IFNGR1,TMEM123,TOB1,MGAT4A,HSP90AA1,AQP3,SMCHD1,FOXP1,RALGAPA1,CCDC109B,BRD2,TC2N,SKIL,MIR24-2,USP36,GPR171,FAU,ERN1,CHMP1B,MTRNR2L8,FOSL2,KCNA3,CKS2,TOMM7,ATF3,PRMT10,NDUFS5,BCL2A1,ABLIM1,MYH9,TAGLN2,PLIN2,ZC3H12A,PBX4,EEF2,DDX5,GNB2L1,ARHGDIB,TNFSF8,CALM1,TTC39C,MATK,RUNX3,ETS1,NACA,TAF1D,EIF5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD8A+ NK-like_PMID_33861994,T cell,GNLY,FGFBP2,TYROBP,GZMB,KLRD1,FCGR3A,SPON2,PLAC8,KLRB1,CX3CR1,KLRF1,IFITM2,FCER1G,GZMH,SELL,S1PR5,MBP,KLRG1,GZMM,FAM65B,PRF1,ZEB2,FGR,BIN2,MATK,CLIC3,IFITM1,PTGER2,FLNA,HOPX,AES,IFITM3,S1PR1,RASGRP2,CD300A,TTC38,ADD3,KLRC1,SAMHD1,KLF3,SH3BP5,PLEK,C1orf21,FCRL6,PXN,PRSS23,EFHD2,KLF2,TXNIP,TGFBR3,S100A4,RAP1B,CD160,PTGDR,LYAR,NCR3,LAIR2,CCND3,TBX21,ZAP70,CD52,LAIR1,DSTN,CDC25B,SORL1,AHNAK,EMP3,STK38,C12orf75,RORA,IER2,SYNE1,MYBL1,SYTL1,SELPLG,IL7R,MYO1F,ANXA1,CEP78,STOM,SH2D1B,ICAM2,EEF2,PLEKHA1,TPST2,GPR56,GPR65,S100A10,ITGB2,UPP1,TGFB1,LINC00861,KLRC3,PTPN4,FLOT1,ITGAM,VCL,CDKN2D,RASSF1,SLC9A3R1,RASA3,LILRB1,ADRB2,TES,ATM,FLI1,CYTH1,NCR1,MTSS1,SERPINB6,RGS19,CD48,MAPK1,SLC44A2,RAP1GAP2,TIMP1,PIM1,XBP1,GNPTAB,AOAH,PABPC1,PPP2R5C,MYO1G,CD320,C1orf162,TMEM123,MYL12A,TAGLN2,OSTF1,PRKCB,GSAP,ABHD17A,ADAM8,MGAT4A,FYN,RCBTB2,CTB-133G6.1,ARL4C,CAPN2,CALM1,SRSF5,ARRB2,P2RY8,TSPAN32,PTPN12,OSBPL5,S1PR4,ANXA2,RAB7L1,TCF7,FKBP11,CD99,TPT1,GLTSCR2,CYBA,EIF3L,YBX1,SSH2,SUN2,CAST,PRKCQ-AS1,ZNF600,JAZF1,CMC1,C9orf142,SIGIRR,GLUL,RNF126,RNF166,GK5,SAMD3,C10orf54,TMIGD2,FAIM3,FBXW5,YWHAQ,PRMT2,GTF3A,FUT11,NME1-NME2,LITAF,NKG7,PTP4A2,ARHGAP25,RBM3,STAT4,CYFIP2,CCDC109B,TFDP2,MIR142,CD247,CD47,AGTPBP1,NOSIP,IQGAP2,MFNG,UBA52,BIN1,DGKD,HIST1H1E
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD4+ Naive_PMID_33861994,T cell,TCF7,CCR7,NOSIP,SELL,PRKCQ-AS1,MAL,FAM65B,AES,LEF1,C1orf162,GIMAP7,LINC00861,ACTN1,MYC,AIF1,LDHB,CTB-133G6.1,FHIT,EIF3E,GIMAP5,GIMAP1,SATB1,NACA,PLAC8,ADTRP,EIF3L,LDLRAP1,SRSF5,HIST1H4C,TRABD2A,GLTSCR2,UBA52,ATM,CD48,PABPC1,LIMD2,EEF2,TXK,CD8B,IFITM1,FBL,TMEM123,TOMM7,GNB2L1,TPT1,HIST1H1D,GIMAP4,NSA2,TSHZ2,NPM1,C6orf48,RASGRP2,UXT,PNISR,NUCB2,NME1-NME2,FOXP1,TRAF3IP3,ABLIM1,LINC00402,ADD3,AC006129.2,SLC40A1,UQCRB,RSL1D1,EIF3H,TMEM204,BTF3,ALKBH7,C1QBP,COX7C,FAU,CDC25B,LTB,SH3YL1,ATP5O,PFDN5,EIF2S3,TCEA3,CCDC109B,EIF4B,C1orf228,SORL1,LPAR6,APEX1,HIST1H1E,COMMD6,C12orf57,ST13,ANKRD55,EPB41L4A-AS1,TTC3,COX4I1,ZFAS1,FAIM3,EPHX2,STMN3,BEX2,C14orf64,TXNIP,THOC3,MGAT4A,LRRN3,PASK,LSM5,S1PR1,FBLN5,TESPA1,SPINT2,MDS2,SNRPD2,RCAN3,ERP29,SNHG8,CAMK4,SLC25A6,NDUFB9,VPS51,NME4,C8orf59,MFNG,NDFIP1,USP10,EIF3F,DGKA,MAPKAPK5-AS1,GPSM3,TOMM20,LINS,HINT1,FLT3LG,IMPDH2,RASA3,NELL2,SERINC5,BEX4,HNRNPA1,BIN1,RSL24D1,SAMHD1,NGFRAP1,PDK1,PDE3B,RNASET2,OXA1L,CRBN,STK38,RIC3,EIF3M,EIF3D,SEC62,HMGN3,ITGA6,GCC2,PRMT2,LUC7L3,TAPSAR1,EPB41,ATP6V1G1,DPEP2,TMA7,TMEM256-PLSCR3,TRAT1,C11orf1,BNIP3,C11orf31,TMEM243,CCNG1,CCND3,COX6C,ZRANB2,PHB2,BCL11B,EIF5A,NCBP2-AS2,ICAM2,RIN3,CHCHD10,EIF2A,OXLD1,DNAJC19,SNHG7,MAML2,XPA,BIN2,ZFAND1,ANXA2R,CYLD,EIF3K,FYB,PLEKHB1,AAK1,KLF3,NBPF15,ANP32B,MZT2B,SUPT3H,IL6ST,LTA4H,PSIP1
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD4+ Treg_PMID_33861994,T cell,CXCL13,FOXP3,AC017002.1,TNFRSF18,HLA-DRB5,CTSC,TIGIT,CTLA4,TNFRSF4,HLA-DRB1,BATF,CD74,HLA-DPA1,HLA-DRA,HLA-DQA1,HLA-DQA2,TBC1D4,DUSP4,MIR4435-1HG,GBP5,IL32,HLA-DPB1,CARD16,TNFRSF9,ENTPD1,CXCR3,HLA-DMA,DNPH1,PMAIP1,SIRPG,CXCR6,SLAMF1,CD27,LINC00152,HLA-DQB1,GBP2,LAYN,RGS1,UCP2,CORO1B,APOBEC3C,IKZF2,TNFRSF1B,BTG3,CCR8,ACP5,FABP5,LAIR2,CD2,SH2D2A,PKM,STAT1,ICOS,TOX,PTPN7,ETV7,RBPJ,MIR155HG,EPSTI1,IFI6,APOBEC3G,CLIC1,PTTG1,TYMP,STAM,CD70,GPX1,ICA1,NCF4,CAMK1,NINJ2,IL2RA,HNRNPLL,GALM,PGAM1,PHLDA1,FKBP1A,CASP1,ACTA2,PHTF2,RTKN2,NDFIP2,HLA-A,CST7,LSP1,ITM2A,SLA,CD82,CCL4,CDKN2A,PARK7,LTA,HSPA1A,GK,IL2RB,NMB,ASB2,SAT1,SIT1,SYNGR2,PSMB9,RABGAP1L,OAS1,RHOC,ZBED2,PIM2,TTN,PPM1G,IL2RG,CD200,BCL2L1,CCND2,IL1R2,LGALS3,F5,PFN1,GBP4,CD79B,BST2,ZBTB38,PRDM1,LYST,TBC1D8,BAX,PDCD1,PAM,CALM3,CKLF,PSMB8,REC8,IFI27L2,RHBDD2,IQGAP1,LCP2,ISG15,NEDD9,PSME2,CCDC50,ARPC5L,MAGEH1,ID3,SASH3,JAKMIP1,SKAP1,MYL6,OASL,HTATIP2,INPP5F,LMCD1,FANK1,TRAF1,GADD45A,HSPA1B,VAMP5,INPP1,CACYBP,LIMA1,UGP2,MAST4,TNIP3,MICAL2,DNAJB4,ARPC1B,SMS,PSMB3,PPP1CA,WDR1,BTLA,MYL6B,C9orf16,IDH2,PHPT1,CCDC167,PELI1,CFLAR,IKZF4,MAP1LC3A,SLC9A9,COX8A,PSMD8,SH3KBP1,MTHFD2,PDIA6,NABP1,ARID5B,GBP1,CCDC141,CLTA,GLRX,RNF213,DYNLL1,UBE2L6,NAMPT,TAP1,PRF1,SPATS2L,DOK2,CTSD,CD58,PRDX1
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD4+ Activated IEG_PMID_33861994,T cell,CREM,ZFP36,NR4A2,NR4A1,ANXA1,HSPA6,DNAJB1,FOSB,LMNA,CDKN1A,HSPH1,YPEL5,DNAJA1,ZNF331,HSP90AA1,TNFAIP3,FAM177A1,AREG,RGCC,FOS,DUSP2,HSPA1A,HSPA1B,FTH1,SRGN,SLC2A3,DUSP1,ZFP36L2,ZFAND2A,CSRNP1,PPP1R15A,MYADM,CD69,CXCR4,SELK,PTGER4,TSC22D3,EZR,CCNH,ATF3,KLF6,JUN,MCL1,SERTAD1,PER1,RGS2,FAM46C,CHMP1B,TNF,PDE4B,BTG2,HSPE1,ELL2,VPS37B,CITED2,BAG3,NEU1,CCL5,SAMSN1,HSPA5,GABARAPL1,ANKRD37,JUND,NFKBIA,CD55,AIM1,GADD45B,JUNB,RGS1,RGS16,ARL4A,TOB1,GLUL,LINC-PINT,HSP90AB1,TSPYL2,UBB,ID2,HSPD1,PHLDA1,CYCS,KLRB1,IL7R,XCL1,NR4A3,SC5D,REL,SYAP1,IFRD1,PFKFB3,ERN1,TUBA4A,IFNG,BHLHE40,ATP1B3,SRSF7,PTP4A1,PDE4D,SAT1,INSIG1,TMEM2,BTG1,DDX3X,IDS,GLIPR1,BCAS2,SERPINH1,USP36,HSPA8,RALGAPA1,HERPUD1,GPR183,PLAUR,EIF4A3,SGK1,MIR24-2,TIPARP,PERP,FOSL2,DNAJB4,PLIN2,SLC38A2,ZC3H12A,HOPX,SYTL3,EGR1,UBC,SKIL,CKS2,SOD2,IVNS1ABP,KDM6B,PARP8,PNP,SIK1,CCR6,PRMT10,H3F3B,SLC7A5,TUBA1A,RNF19A,PIK3R1,PPP1CB,ELF1,DNAJB6,GZMK,DDIT3,AHNAK,SDCBP,RASGEF1B,PBX4,RANBP2,RUNX3,ANKRD28,GPR65,CNOT6L,NR3C1,CLEC2B,ZFP36L1,GPR171,GZMA,ETV3,CLK1,DDIT4,SMCHD1,MPZL3,UBE2S,GADD45G,RNF125,DUSP4,AMD1,CYTIP,LEPROTL1,NFKBIZ,HERPUD2,RORA,CACYBP,PDCL3,MAFF,PLK3,HSPB1,DUSP6,ALG13,EML4,ZC3HAV1,IFNGR1,TGIF1,CD40LG,EIF1,NANS,SNHG12,ZBTB16,TNFSF14,RILPL2,JMJD6,RIPK2,LYAR,CTA-29F11.1,GLA,CD83
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD4+ Effector_PMID_33861994,T cell,GZMA,NKG7,CCL5,GZMK,ANXA2,CAPG,LGALS1,S100A4,CD8A,SH3BGRL3,LGALS3,ALOX5AP,CLIC1,CST7,HOPX,C12orf75,CTSW,CD52,GLIPR2,CD99,S100A6,LCP1,S100A10,HLA-DRA,SAMD3,S100A11,MYO1F,STAT1,PFN1,PPP1R18,XCL1,AHNAK,ITGB1,ACTN4,ANXA5,PPP1CA,EMP3,HLA-DPB1,APOBEC3G,PRF1,CKLF,CD74,CYBA,IL32,MSN,KLRG1,SLFN5,GBP5,MYO1G,CAP1,HLA-DRB1,LINC00152,SIT1,ITGB2,CHST12,EMB,CORO1A,REEP5,FLNA,ACTG1,CXCR3,CTSD,HLA-DPA1,TPM4,ANXA6,HCST,ANKRD32,KLRB1,ARPC3,CFL1,HLA-DRB5,PSME2,PSMB9,LSP1,UBE2L6,RAC2,ZYX,STOM,PYCARD,MAP4,NCR3,SYNE2,ITGB7,COTL1,CD63,PTPRCAP,GBP1,SASH3,CAPZB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD4+ Proliferating_PMID_33861994,T cell,STMN1,TYMS,RRM2,TUBA1B,MKI67,UBE2C,KIAA0101,HMGB2,HMGN2,NUSAP1,TOP2A,CENPF,PTTG1,TK1,H2AFZ,MCM7,CENPM,TPX2,PCNA,HLA-DRB5,FABP5,ASF1B,CDK1,DUT,ZWINT,SMC4,HIST1H4C,BIRC5,ASPM,CXCL13,CKS1B,HLA-DRA,CDC20,CCNB2,TMEM106C,HIST1H3C,DHFR,HIST1H1B,CDKN3,SMC2,CLSPN,H2AFV,MCM5,MT2A,CCNA2,CENPW,RANBP1,KPNA2,PKM,CENPU,UBE2T,HMGB1,CKS2,CARHSP1,GINS2,HIST1H3B,SNRNP25,HLA-DRB1,CDCA8,TPM4,MCM3,NUDT1,CD74,FEN1,PGAM1,EZH2,TUBA1C,LMNB1,KIF22,TMPO,HIST1H2AI,DEK,KIFC1,HIST1H2AL,CCNB1,HN1,TPI1,CASC5,LGALS1,HIST1H1E,PLK1,HMMR,PKMYT1,HLA-DQA2,AURKB,DTYMK,CENPE,PFN1,PHF19,HLA-DPA1,H2AFY,CDCA5,ATAD2,ENO1,RRM1,MAD2L1,SLC25A5,PRDX3,RNASEH2A,H2AFX,HELLS,NUF2,MCM6,CALM3,RAN,GTSE1,DLGAP5,CDCA3,HLA-DQA1,CKAP2L,NCAPH,MCM4,ANP32E,DDX39A,COX8A,GNG5,STRA13,DNMT1,COX5A,RACGAP1,MND1,SIVA1,NASP,IDH2,SNRPB,AC017002.1,GGH,FANCI,CENPN,ANXA5,NCAPG,LSM4,SNRPD1,VDAC1,GMNN,CCL4,ANAPC11,WDR34,ACTG1,MT1E,KIF23,PRC1,MCM2,TXNDC17,HIST1H2AG,SAE1,SNRPG,LSM2,CDCA7,CEP55,TXN,RAD51AP1,HIST1H2AH,SKA2,CDC45,SMS,NEIL3,RAD21,HMGB3,RAD51,LIG1,ATP5G3,MIR4435-1HG,SLBP,HIST1H3D,NDC80,FAM111B,ARL6IP1,RFC4,TCF19,PSMC3,TALDO1,HNRNPAB,ACOT7,HIST1H2AJ,C12orf75,SGOL1,KIF20B,MTHFD1,CDKN2A,DNAJC9,PSMB2,HIST1H2BH,FKBP1A,ARPC5,CCDC167,CDCA2,CENPK,BANF1,KIF15,ORC6,PPP1CA,PPIA,HNRNPA3,PSMD8,CFL1,KIF11,NUDT21,CENPH,ERH
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,B cell_PMID_33861994,B cell,CD79A,MS4A1,HLA-DRA,BANK1,LINC00926,TCL1A,CD79B,CD74,RALGPS2,HLA-DQB1,MEF2C,FAM129C,FCRLA,HLA-DPB1,CD83,44256,HLA-DPA1,IRF8,ARHGAP24,FCER2,CD37,HLA-DQA1,SMIM14,AC079767.4,BLK,POU2F2,HVCN1,CD19,SWAP70,HLA-DRB5,VPREB3,HLA-DRB1,ADAM28,SYK,NCF1,LY86,IGJ,IGLL5,SNX2,TCF4,HLA-DOB,HLA-DQA2,CTSH,CD40,HLA-DMB,CD22,AFF3,FAM26F,CYBB,BLNK,HLA-DMA,IFT57,TSPAN3,POU2AF1,CD72,GNG7,CCDC50,FAIM3,FGD2,PDLIM1,PKIG,FCGR2B,CD1C,BTK,RNASE6,TNFRSF13B,KIAA0125,PPAPDC1B,STX7,SCIMP,ALOX5,CYB561A3,IFNGR2,GAPT,NBPF10,COBLL1,PAX5,EAF2,AIM2,KIAA0226L,FCRL2,BACH2,LAT2,DAPP1,SYPL1,SYNGR2,CXXC5,PNOC,BIRC3,GPR183,CTB-133G6.1,TMEM154,TPD52,CXCR5,SNX3,SELL,LTB,TSPAN13,IL4R,BCL11A,DRAM2,CD55,CIITA,NCF4,HLA-DOA,MTSS1,ORAI2,SPI1,SMARCB1,CD180,RCSD1,ADK,STAP1,TLR10,PLD4,CTSS,NAPSA,RNASET2,SNHG7,CD52,PLCG2,QRSL1,MTRNR2L8,REL,STAG3,EEF2,PLEKHF2,WDFY4,EBF1,SNX29P2,SNX29,BCL2A1,POLD4,ATP2B1,MBD4,CAPG,PPP1R14A,LY9,BTLA,KIAA1033,HHEX,SPIB,PHACTR1,CPNE5,PRKCB,LTA4H,FOXP1,CDCA7L,CLECL1,UVRAG,PARP15,EIF1AY,FCHSD2,METTL7A,TFEB,RAB30,SP110,FAM96A,ARHGAP17,SPINT2,SNX22,HDAC9,GPX1,TMEM243,SCPEP1,GRN,ST6GAL1,BASP1,SKAP2,MARCKS,COL19A1,SEC62,PLAC8,CHCHD10,FAM65B,RASGRP2,BACE2,SH3BP5,MYC,ZFAS1,ZCCHC7,GRB2,PXK,FAM177B,NCOA3,MTPN,PPM1K,APPL1,SSPN,LHPP,DDAH2,PTPN6,RIC3,SMC6,SP140,CCR7,PTPN1,MPEG1,LAPTM5,GCA
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,Conventional NK_PMID_33861994,NK cell,CX3CR1,FCER1G,GIMAP7,PTGDS,TXNIP,S100B,KLRF1,C1orf162,GSAP,CLIC3,HIST1H1D,GZMB,AKR1C3,ATP5I,HDDC2,FGFBP2,CARD16,FCGR3A,PLEK,MYL12A,TRAF3IP3,HOPX,NDUFB7,UCP2,GZMA,CYBA,TYROBP,C14orf2,PSMB10,UQCR11,PRSS23,UQCR10,PET100,SAMHD1,LINC00861,LAIR2,IGFBP7,HMGN3,PLAC8,GLRX,NDUFA3,ATP5J,USMG5,LSMD1,NDUFB1,CD247,TRAPPC1,NDUFB2,COX6C,TTC38,KLRB1,TMA7,ARPC5,PSMB9,RARRES3,PRF1,TMEM258,VAMP8,ALOX5AP,RBX1,HIST1H1E,PRMT2,GMFG,S100A4,NKG7,ATP5E,PYHIN1,DBI,ZCCHC17,TAPSAR1,GPR65,ATP5J2,DGUOK,UBL5,IFITM2,NCR1,GIMAP4,LIMD2,IFITM1,SPON2,PTPN12,NDUFB3,TNFAIP8L2,ARPC3,MIEN1,SH2D1B,RNF213,MYEOV2,PSME2,SIGLEC7,NCR3,TMSB10,SEC61G,LINC00299,TCEB2,RAP1B,SLFN5,COX6B1,ZNF22,NUCKS1,BRK1,PPP1CA,COX5B,KLRD1,SERF2,DENND2D,POLR3GL,LSM3,SCP2,DAD1,C5orf56,ATP5G3,PTPN4,NDUFC1,MAPK1,AAK1,CXCR2,ZBTB8OS,SRP9,PSME1,FGR,PYCARD,SSBP1,GNLY,C4orf3,COA3,SH3BP5,PIN4,NDUFA1,DYNLT1,EFHD2,LAIR1,PSMA5,ZRANB2,TCEAL8,UBLCP1,TBXAS1,FUT11,CEP78,PSMA6,SPN,CXXC5,HCST,CISD3,HIPK2,POLR2G,GIMAP1,LUC7L3,NDUFA12,UCHL5,STK38,ANXA4,GTF2H5,PFDN1,ATP5F1,OSTF1,IFI27L2,ATP6V0E1,FAM49B,MBP,BANF1,GSTP1,VPS4B,ERH,GIMAP6,CLIC1,DYNLRB1,DNAJC8,PRKACB,STARD3NL,LAMTOR2,ATM,GIMAP5,NDUFA4,JAK1,CHMP2A,NDUFB9,TXK,EIF2S2,YWHAB,COX16,LAMTOR4,ANAPC16,ATP6V1F,PSMB3,GTF2A2,POMP,NEDD8,DECR1,PPP1R7,DPM3,CHST2,CD47,FAM107B,COMMD8,CEBPZ-AS1,OXLD1,SNRPE,LAMTOR1,ATOX1
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,NK HSP+_PMID_33861994,NK cell,HSPA1A,DNAJB1,HSPA1B,HSPA6,NR4A2,IL7R,FOS,HSP90AA1,CREM,HSPH1,JUN,NR4A1,ZNF331,TNFAIP3,DUSP2,DUSP1,PPP1R15A,JUNB,TUBA4A,FOSB,ZFP36,NFKBIA,HSPE1,DNAJA1,IFNG,CD69,CXCR4,CD3E,RGS1,SERTAD1,CSRNP1,HSPD1,HSP90AB1,XCL1,RGCC,AREG,FAM177A1,GADD45B,BTG2,SLC2A3,ATF3,TSPYL2,RHOB,MCL1,XCL2,NR4A3,CD3D,FTH1,VIM,LMNA,GZMK,EZR,TSC22D3,KLF6,RGS2,IER2,HSPB1,YPEL5,TNF,IFRD1,ZFP36L2,JUND,PMAIP1,CCL4,LDHA,PDE4B,CCL4L2,GABARAPL1,CDKN1A,MYADM,CD44,BTG1,NFKBIZ,HSPA8,FAM46C,ZFAND2A,BAG3,SLC7A5,CITED2,SAT1,VPS37B,LINC-PINT,CACYBP,RALGAPA1,PTP4A1,DUSP4,NEU1,CCNH,PTGER4,H2AFX,KDM6B,HERPUD1,HSPA5,ELL2,TOB1,ZFP36L1,BRD2,ANKRD37,SRSF7,TMEM66,ATP1B3,CHMP1B,SRSF2,REL,CCL3,CD8B,MIR24-2,BHLHE40,KRT86,HLA-DRB1,JMJD6,BIRC3,ZC3H12A,SIK1,DDX3X,PER1,PLIN2,PHLDA1,MAFF,CD5,CKS2,TNFRSF1B,EML4,SFPQ,DNAJB4,MARCKSL1,CD83,AMD1,TMEM2,HLA-DRA,RASGEF1B,SNHG12,DDIT3,SELK,CRTAM,PLP2,IER3,ATP6V0C,SAMSN1,CHORDC1,CD3G,ZFAND5,CD8A,ARL4A,AIM1,STK17B,PNRC1,PABPC1,PIK3R1,FOSL2,INSIG1,SLC38A2,CLK1,ANXA5,LEPROTL1,POLR2A,PPP1R2,RBKS,UBC,ZNF683,TAGAP,ENC1,HLA-DQB1,PRNP,CD55,TUBA1A,SRRT,OASL,EIF4A3,DNAJB6,USP36,TAGLN2,RNF19A,SKIL,SDCBP,C1orf63,H3F3B,CTA-29F11.1,ATP1A1,TIPARP,SQSTM1,SYAP1,NFE2L2,SPOCK2,GLUL,EMD,HERPUD2,HLA-DQA1,FKBP4,EGR1,EIF1,SNHG8,MAT2A,HLA-DRB5,PTPN7,TNFSF14,UBE2S,EIF5,RELB,SNHG15
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,TAM HLAhi_PMID_33861994,Macrophage,HLA-DQA2,APOC1,OLFML3,HLA-DRB5,HLA-DRA,HLA-DPB1,TREM2,APOE,C1QB,C1QC,HLA-DPA1,CAPG,CTSD,NPC2,CXCL10,TUBA1B,HLA-DQB1,SERPINA1,PRDX1,LILRB4,FAM26F,HLA-DRB1,FCGR3A,PSME2,CD68,CD74,LIPA,HLA-DMA,CXCL9,GPX1,PLD4,HLA-DQA1,ALOX5AP,TNFSF13,C1QA,FCGR1A,CD9,LGALS3,C3,HLA-DQB2,CTSH,TMEM176B,SYNGR2,LAP3,GRN,DNASE2,SLC25A5,CTSB,ACP5,AKR1A1,RGS10,UBE2L6,FABP5,FCER1G,GPNMB,CYBA,SERPINF1,LY86,HN1,TSPO,ATP5G3,ARPC1B,TYROBP,IL18,ADORA3,AKR1B1,GBP1,CST3,PSAP,PSMB10,SCPEP1,CD63,HLA-DMB,PYCARD,ANXA2,HLA-C,RAB32,LYZ,FAM96A,RHOG,IGSF6,CPVL,SCIN,VAMP8,TNFSF13B,LAPTM5,HLA-A,HMOX1,LITAF,S100A11,SLC7A7,POLD4,SLAMF8,ATP6V0B,FTL,RHOA,ATP6V1F,GABARAP,CTSC,RARRES3,CTSL,COX5A,PRDX3,PPA1,ALDH2,SMCO4,STAT1,SPP1,ARPC3,CXCL16,PSMB9,PKIB,C1orf162,FCGR2B,RNF130,SNX10,UCP2,ACTG1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,TAM HLAint_PMID_33861994,Macrophage,SEPP1,MTRNR2L8,HSPA6,RNASE1,HSPA1A,HSPA1B,CD163,HSPB1,BAG3,MTRNR2L12,HSP90AA1,SLCO2B1,S100A8,SAT1,DNAJB1,SLC11A1,CD83,RNF213,SLC1A3,CLK1,PER1,CEBPD,TNFAIP2,ZNF331,MTRNR2L2,NR4A2,HSPD1,ISG15,SIGLEC1,MYO9B,SLC40A1,KLF6,REL,KLF4,C5AR1,SH3TC1,MERTK,DAB2,PLAUR,ABCA1,FGD2,ITGAX,VMP1,CEBPB,AKAP13,GADD45B,PLTP,LRP1,ARL4C,MS4A7,RNF144B,PARP14,GPR183,AP2A2,RASGEF1B,DAPK1,FKBP5,CCNL1,ATF3,TRA2B,RGS2,DMXL2,WSB1,GNAS,DDX17,ZFAND5,ARAP1,ZFAND2A,MYO1F,MAFB,NABP1,MS4A4A,SRRM2,HSPE1,SRGAP2,STXBP2,PDK4,MAT2A,MPEG1,JUN,CD81,MCL1,ITPR2,SOD2,TNFRSF1B,USP15,NOTCH2,GRASP,CSF1R,CELF2,MAP3K8,FMNL1,ATG16L2,PPP1R15A,USP53,SSH2,SMG1,XIST,CSF3R,RANBP2,AFF4,MXD1,ARHGAP4,ACSL1,ARRDC2,IRF2BP2,PDE4DIP,SLC25A37,SRGAP1,FUS,IL10RA,CHMP1B,GK,IRAK3,KCTD12,PDE4B,C1orf63,HNRNPH1,TTYH3,DENND3,S100A9,ADRBK1,IRS2,SPAG9,FRMD4A,OGFRL1,FCHO2,CIITA,TCIRG1,ZEB2,LENG8,TCF25,RBM39,PLEKHO1,KMT2C,PTPRE,NRP2,HIF1A,NBPF10,SMAP2,B4GALT1,COLGALT1,RHBDF2,CFLAR,NKTR,MX2,RBM47,SCO2,PNISR,NXF1,RUNX1,NUFIP2,HBEGF,HSPA5,INPP5D,AKAP9,SON,CHORDC1,JMJD1C,SNX29,CCNH,BRI3,FRMD4B,RHOB,SQSTM1,N4BP2L2,PLEC,MYO5A,NAIP,MX1,SESN1,KCNMA1,NUPR1,TMEM259,SGK1,TRPM2,PELI1,SMCHD1,PSME4,,,,,,,,,,,,,,,,,,,,,
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,TAM ISGint_PMID_33861994,Macrophage,RGS5,IGFBP7,SPARC,BGN,MGP,SPARCL1,IGFBP3,PLVAP,CCL5,ACTA2,ESM1,CALD1,VWF,MYL9,FLT1,NKG7,APP,THY1,NDUFA4L2,ADIRF,PRSS23,COL4A2,TAGLN,PPAP2A,EPAS1,IL32,GNLY,COL4A1,TIMP3,CRIP2,GNG11,TPM2,SPTBN1,IL7R,GJA4,PTPRCAP,GZMA,ANGPT2,IFITM1,CD3E,HSPG2,TM4SF1,IGFBP5,CST7,TPM1,CLU,BCAM,CALCRL,GZMK,COL18A1,ITGB1,RAMP2,ESAM,ITM2C,MTRNR2L12,CAV1,ELTD1,LHFP,CTSW,ADAMTS1,PPAP2B,CD34,CCL4,MAP1B,CPE,LBH,PODXL,CRYAB,CLEC14A,FRZB,GZMH,IGFBP4,PTRF,SLC2A3,AREGB,COL8A1,MCAM,TIMP1,ETS1,SYNE2,CD8A,PDLIM1,LDB2,STC1,RAMP3,F2R,GZMB,CNN3,OLFML2A,COL1A2,CD3D,CTC-250I14.6,ANXA6,DDX5,MTRNR2L2,MYH11,PGF,DUSP4,CD59,PLAC9,SPOCK2,TINAGL1,KDR,IFITM2,APOLD1,COL3A1,ENG,TMEM204,CD2,MFGE8,MYLK,ECSCR,NPDC1,EHD2,ITGA1,COL6A2,WWTR1,MYH9,MYO1B,CD69,TAGLN2,S1PR1,SEPW1,NNMT,TFPI,SLC9A3R2,XIST,CLIC4,LAMA4,NID1,44448,A2M,FLNA,RAC2,YWHAQ,CAV2,BIRC3,IFITM3,C10orf10,YWHAZ,CD248,IER2,IL2RG,TUBA4A,ARHGAP29,PPP1R15A,PLK2,MYADM,NFIB,CDH5,PTPRB,CCNH,CD46,FOSB,FKBP1A,MAP4,TPM4,EZR,LMNA,FSTL1,ECE1,ZFP36,TSPYL2,NR4A1,ZEB1,TNFAIP3,SOD3,GUCY1B3,AHNAK,CCL4,FYN,HSP90B1,CYYR1,MACF1,HEYL,IVNS1ABP,44446,PTK2,CCNH,SEPP1,NR4A2,ITM2A,LINC-PINT,BEST1,LINC00657,KCNE3,PRKCDBP,CD151,PRKAR1A,DDX5,NR4A3,AREG,CDC42EP3,SLC38A2,CYB5R3,ARID5B,DDX3X,BRD2,UTRN,JUNB
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,cDC2_PMID_33861994,Dendritic cell,APOE,C1QC,C1QA,C1QB,IFITM3,SERPINA1,MT2A,FCGR3A,CLEC10A,TYROBP,APOC1,FCN1,C5AR1,S100A4,SPP1,MS4A7,S100A9,RHOB,FCGR2A,MAFB,FTL,CTSD,FCGR2B,GLUL,S100A8,PLIN2,IL1B,CFD,FCER1A,CD14,FN1,C3,CSF1R,ITM2B,OLR1,IGSF6,THBS1,CD163,IFI6,MS4A6A,CCL3,CD1C,LST1,CD9,PLXDC2,TREM2,IER3,VSIG4,TMEM176B,FPR1,CTSH,CD68,CD1E,RNASE1,FYB,IFITM2,ANXA1,PLAUR,PILRA,CSTA,SDS,CTSB,SGK1,SLC11A1,FCER1G,ASAH1,LGALS3,S100A6,TXNIP,BTG1,S100A11,IFI30,PDK4,HBEGF,TSPO,NCF2,RNF130,CARD16,ALOX5,CEBPD,SOD2,CAPG,CTSS,IL18,IL8,CXCL3,TNFSF13,CASP1,FCGR1A,ZFAND5,EREG,RGS1,FTH1,IL13RA1,SLC7A7,CYBB,TMEM176A,FAM26F,SAMSN1,ARRB2,SDCBP,ATP6V1B2,CPM,ETS2,APLP2,LAPTM5,GABARAPL1,MARCKS,C3AR1,NPC2,UPP1,IL1R2,MS4A4A,AIF1,ZEB2,DOK2,CXCL2,BNIP3L,TLR2,MSR1,SAT1,FXYD5,CD63,NLRP3,LRP1,NAMPT,LY6E,SRGN,VEGFA,SLC1A3,NINJ1,TBXAS1,PSTPIP2,PEA15,CD300A,LIPA,HIF1A,NAIP,GPX4,VCAN,YWHAH,CSF3R,GBP1,HCST,TNFAIP3,TIMP1,KLF4,CTSL,HNMT,MFSD1,RASSF4,GPNMB,CLEC4A,TNFRSF1B,AKR1B1,PLSCR1,GIMAP4,A2M,LILRB2,CEBPB,CASP4,FKBP5,PLBD1,SLC16A3,TNFSF13B,GBP2,SMAP2,PSAP,FBP1,DPYD,TYMP,CD44,GPX1,CTSA,SORL1,TKT,LTC4S,CRTAP,TGIF1,AOAH,LITAF,HERPUD1,TREM1,ID3,F13A1,SCPEP1,LINC00936,ATP6AP2,LCP2,NR4A2,IRS2,C10orf54,CD1D,KLF2,MGAT1,FILIP1L,GRINA,ZFP36L1,LIMS1,CDKN1A
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,cDC1_PMID_33861994,Dendritic cell,C1orf54,DNASE1L3,IDO1,SNX3,CLEC9A,CPNE3,WDFY4,S100B,IRF8,CCND1,CPVL,CLNK,LGALS2,TACSTD2,XCR1,TMEM14A,RGCC,NET1,SLAMF7,CADM1,TXN,NAAA,CST3,KIAA1598,NAPSA,HLA-DOB,CCL5,ASB2,TAP1,UCP2,GSTP1,VAC14,LSP1,SERPINF2,ASAP1,CAMK2D,FLT3,NKG7,MPEG1,KIAA0226L,PPAP2A,S100A10,FNBP1,CDK2AP2,TMSB4X,CYB5R3,BATF3,C1orf21,DUSP4,LIMD2,GYPC,PSMB9,RGS10,ACTG1,CNN2,DBN1,TAGLN2,STMN1,SUB1,ID2,EGLN3,ENSA,CCDC126,ZNF366,BIRC3,CSRP1,HIST1H4C,WARS,MARCKSL1,HIST1H2AI,PTPRCAP,GZMK,LSM6,NAP1L1,ANPEP,AIM2,SELPLG,ANXA6,HIST1H1E,IL32,MZT2A,TRMT112,ICAM3,NDUFV2,VAV3,BTLA,SNX22,BASP1,RAB7L1,PSME2,CCSER1,CD59,NME4,RHOF,GCSAM,LCP1,C1QBP,LRRCC1,P2RY6,DUSP2,PTPRE,DENND1B,PLCD1,IGFBP7,CACYBP,PTK2,CD40,EVL,SERPINH1,NCOA7,BTG2,KIF16B,LIMA1,RAB11FIP1,UBE2C,DSTN,ACTN1,ELOVL5,FGD2,ROMO1,G3BP2,PPT1,LMNA,ACTR3,LYRM4,CCDC6,TOX,DCTPP1,DYSF,COX7C,NLRC5,ATP1A1,CD8A,SAP18,C12orf45,GZMA,BID,PSME1,RAB32,ATG3,PSMB8,NFATC2,CD74,SRI,44445,H2AFZ,MIF,PTMS,PPM1J,CDKN2C,TUBA1A,EIF5A,TPM4,RAB11A,MKI67,TSTD1,TPM3,HDAC9,MCOLN2,CD3E,HMGA1,DAPP1,WBSCR22,DDIT4,LPP,HSPE1,UBL7,MYL6,TMSB10,MCUR1,PIK3CB,SEPHS2,SERPINB9,HIST1H1B,TPMT,KCNK6,ARPC2,NSMCE1,CCT2,SERPINF1,PTTG1,HMGN2,UPF2,TUBA4A,PLEK,PSTPIP1,NME1-NME2,MCM5,CFL1,PRDX2,C20orf27,HINT1,APOL3,CCDC12,TMEM50B,NAV1,LMNB1,SFT2D2,UNC119,CALCRL
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,pDC_PMID_33861994,Dendritic cell,PTGDS,GZMB,IGJ,CLIC3,TCL1A,LILRA4,ITM2C,IRF7,MZB1,C12orf75,IRF8,TPM2,DERL3,PLAC8,LRRC26,SOX4,RASD1,IRF4,TCF4,IL3RA,PTPRCAP,SCT,UGCG,CLEC4C,CXCR3,TSPAN13,CCDC50,APP,FAM129C,SMPD3,PPP1R14B,PTCRA,SEC61B,PLD4,MAP1A,CYB561A3,SERPINF1,PLP2,BCL11A,SELL,MYBL2,LDLRAD4,LAMP5,TXN,LTB,LINC00996,ZFAT,CLN8,PPM1K,SPCS1,FUT7,HIGD1A,PTPRS,NUCB2,OFD1,STMN1,C9orf142,SELPLG,SPIB,LIME1,RRBP1,UBE2J1,C10orf118,C12orf57,SEC61G,BLNK,PACSIN1,DSTN,NR3C1,VIMP,PRKCB,OGT,TAGLN2,EGLN3,POLB,PHB,HSP90B1,TSPYL2,CD2AP,UCP2,ALOX5AP,44448,SIDT1,PNOC,NCF1,SLC7A5,IDH3A,FKBP2,ERN1,MAPKAPK2,PARK7,GNG7,SLC15A4,GPR183,LILRB4,ERP29,MPEG1,SEL1L3,SLC44A2,ST6GALNAC4,CARD11,SSR4,RAC2,TRAF4,RUNX2,SIT1,CXXC5,EPHB1,KIAA0226,CD99,SCAMP5,HINT1,CYFIP2,CDK2AP2,A1BG,TMEM8B,C12orf44,FLNB,PFKFB2,CD164,MYL12A,PPIB,SMIM5,SLA2,PNISR,ARHGAP9,SCN9A,SNHG7,FCHSD2,SRP14,GPM6B,RNU12,OSTC,IRF2BP2,PMEPA1,B4GALT1,N4BP2L1,PTPRE,CBFA2T3,ADA,DCPS,HYOU1,VEGFB,BTG2,UNC93B1,DCK,PDIA4,DAAM1,COMMD6,SNRNP25,TNFRSF21,CCDC69,NOTCH4,FAM213A,PHEX,ANKRD12,NBPF10,ANKRD11,PLA2G16,P2RY14,CERS6,HIST1H1C,CHAF1A,AC023590.1,TMIGD2,CORO1C,C1orf186,ZNF706,COBLL1,DUSP5,XBP1,SFT2D2,SPON2,CYTH4,RAB11FIP1,INPP4A,NPC1,ABHD15,EPS8L2,WDR74,YPEL5,ATP2A3,ZDHHC17,CD320,SEMA7A,SEC11C,SIVA1,SLC38A1,TMEM141,SULF2,SMARCB1,FAM60A,AFF3,AEBP1,ATP13A2,MANF,SNX9,ZC3HAV1,IKZF1,CRIP1
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD14+ Monocyte_PMID_33861994,Monocyte,S100A8,S100A12,S100A9,VCAN,FOLR3,MNDA,NCF1,PLBD1,RBP7,CSF3R,LYZ,IER2,SELL,MEGF9,NFE2,CD14,TALDO1,TSPO,PGD,CSTA,IL17RA,NAIP,MGST1,CD36,WDR74,PLP2,CD99,MSRB1,CYP27A1,METTL9,ITGAM,CDA,CES1,GCA,MS4A6A,CYP1B1,PADI4,AGTRAP,FAM200B,NUP214,VNN2,S100A6,PSTPIP1,BLVRB,EMB,LINC00937,BST1,GLRX,APLP2,CRISPLD2,CLEC4E,LGALS2,LAMTOR1,DYSF,LRRK2,QPCT,CAPG,GIMAP7,LRP1,MYO1F,AMICA1,ASGR1,RAB27A,PTAFR,USP15,RNASE6,SORL1,KIAA0319L,CCNY,RAB11FIP1,CLEC4D,GRN,GLIPR2,SERPINB1,SULT1A1,AHNAK,CD1D,CRTAP,44256,C14orf2,F13A1,CTSD,LTB4R,NRG1,MLXIP,ASGR2,CARS2,TNFAIP2,ALOX5AP,PXN,ALDH2,NLRP12,DGKZ,FBXL5,NCF4,SNORD3A,CCDC69,ENTPD1,ZNF467,CKLF,C4orf48,EVI2B,APOBR,GAS7,YPEL3,PKM,SMARCD3,CREB5,GPX1,F5,TKT,RNASE2,ANXA6,AGTPBP1,CKAP4,CAST,RAB32,GTF2I,VIM,PLEC,HMGB2,RNU12,RABAC1,CD93,ETHE1,RETN,UBR4,ABTB1,HP,RAB3D,ALDH1A1,TMEM205,FES,H1FX,SYK,NRGN,MAP3K3,C19orf59,CTSA,ARHGAP26,KCNE3,S100A4,GLT1D1,SAP30,HEBP2,TACC3,CLEC4A,ACTN1,LY86,MPST,CCR2,KCTD12,GLTP,TMEM91,IGF2R,CD302,BAZ2B,EVI2A,CD33,PLD3,ARHGAP9,OGFRL1,LPGAT1,COMT,LBR,ACAP1,ITGAE,FAM198B,OSCAR,P4HB,CR1,GMFG,C1orf228,RNPEPL1,MPP7,RNF24,MTMR3,UQCR11,SIRPA,GABARAP,NACC2,CCDC88B,PYCARD,IL6R,A1BG,TFEC,GCHFR,FAM101B,ATP5I,CPD,KLF13,FBXO9,CATSPER1,MAPK14,INPPL1,LAMTOR4,KIAA0930,PRRC2B,PNPLA2,NDUFB11
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,CD14+/CD16+ Monocyte_PMID_33861994,Monocyte,HSPA1A,FCGR3A,DNAJB1,HSPB1,HSPA1B,HSPH1,HSP90AA1,BAG3,HSPE1,HSPA6,G0S2,NR4A1,IFITM3,TIMP1,MT2A,HSPD1,C1QA,CCL4,HLA-DPA1,ZFAND2A,C1QB,HSPA8,AREG,HSP90AB1,LYPD2,IFITM1,MS4A7,HLA-DPB1,HLA-DQA1,IL1B,HMOX1,MTSS1,DNAJA1,DDIT4,C5AR1,INSIG1,SAT1,BCL2A1,CYTIP,CXCL2,IFITM2,PLIN2,PLAUR,CKS2,ISG20,WARS,CREM,CDKN1C,TCF7L2,ZNF331,CTSL,CDKN1A,CD83,ATF3,ABI3,VMO1,CXCL16,FAM26F,CXCR4,ISG15,HLA-DQA2,OLR1,CXCL3,HLA-DRA,SOD2,SELK,HLA-DQB1,DNAJA4,BIRC3,RHOC,APOBEC3A,EZR,RHOB,ATP1B3,TUBA1B,CCL3,HSPA5,SIGLEC10,ARL4A,PAG1,HLA-DRB5,CTSC,CSF1R,GABARAPL1,RASGEF1B,NR4A3,EVL,LY6E,NR4A2,SNX9,SOD1,HBEGF,RNF144B,UBB,MS4A4A,CYCS,HLA-DRB1,NAP1L1,DUSP2,RBKS,RIPK2,TBC1D8,LST1,CUX1,FTH1,SAMSN1,GPR183,IER3,LITAF,ICAM2,HES4,SERPINB9,PAPSS2,CALR,CHMP1B,CACYBP,FKBP4,MAP3K8,HERPUD1,LILRB2,GLUL,MAFB,THBD,SRGN,ANKRD37,MARCKSL1,CLEC2B,SYAP1,PFKFB3,YBX1,CD74,TMEM66,SIDT2,IER5,BTG1,PMAIP1,PTGES3,ELL2,FABP5,PPIF,CHORDC1,LMNA,ATP1A1,FBP1,TWISTNB,CKB,SPN,IL3RA,PHACTR1,CLEC10A,PDE4B,HIST3H2A,EREG,RAB20,CDC42EP2,CD300A,C3AR1,HN1,ETS2,KDM6B,LCP2,AVPI1,CCNH,GRASP,CCRL2,BID,SERTAD1,LDHA,ZFAND5,OSM,CD79B,SIK1,SNHG8,ATP2B1,PABPC4,PHLDA1,IL10,CMTM6,DDIT3,PDK4,TFRC,CD55,OAS1,GLA,ITGA4,NEDD9,RAP1B,DNAJB6,UBC,STIP1,ZNF703,LILRA3,ADA,EIF4A3,CLK1,GBP1,FCER1G,NAAA,DRAP1,SLC31A2
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,Mast_PMID_33861994,Mast cell,TPSAB1,CPA3,KIT,GATA2,HDC,IL1RL1,CD69,TPSD1,MS4A2,SLC18A2,LMNA,CLU,HPGD,VWA5A,HPGDS,C1orf186,TNIK,LTC4S,CD82,CSF1,BIRC3,MIR24-2,MLPH,RHOH,TNFAIP3,SYTL3,SLC2A3,RGS13,FOSB,MAOB,ADRB2,TIMP3,MAST4,NFKBIZ,PTGS1,GALC,CTTNBP2,SIGLEC6,IL18R1,MCTP2,CALB2,TSC22D1,LIF,SLC26A2,SLC45A3,NDEL1,ANKRD28,RAB27B,ATP6V0A2,LAT,P2RX1,TSEN54,VPS37B,SMYD3,GRAP2,TESPA1,SOCS1,NFKBID,ABCC4,ARHGEF6,PLAT,ACSL4,CNST,RHOBTB3,CNRIP1,TMEM44,BATF,STX3,LMO4,FER,SYTL2,ENPP3,SDPR,HS3ST1,HS6ST1,AHI1,RALGAPA1,DLC1,JUN,KLRG1,ZBTB20,LAX1,ADAM12,44258,IFITM10,ITM2A,ALS2,RNF144A,LEO1,IL4R,CRLF2,CD63,TMEM233,FERMT2,SKAP1,PIK3R6,KIAA1522,RGS1,NMT2,ZFP36,HNRNPA2B1,KIAA1549,HSP90AA1,TDRD3,HSP90AB1,ANKRD36C,EDIL3,CLK1,EPB41L1,CTD-3203P2.2,RBM39,TNFRSF12A,DNAJA1,SLC9A1,CD22,UBB,DIP2C,PEBP1,ATP2A3,RAB37,DHRS9,AHNAK,LINC00473,PBX1,TSC22D3,STXBP6,MTRNR2L8,TP53BP1,HSPD1,ST3GAL3,PTRF,NRCAM,SRSF7,TANC1,SRGN,MSI2,C1orf63,BACE2,FUS,VCP,PKIG,PPM1H,GMPR,IKZF3,VPS13C,ID2,OSBPL8,LCP2,TTC39B,NDFIP2,SLC4A8,HSPE1,PNISR,PROCR,SF1,TEC,PRKAR1A,MAT2A,COBLL1,RRBP1,NDST2,NR3C1,KLF6,SNHG8,SRSF5,PRRC2C,DDX17,TBRG1,LAT2,DDAH2,RBM25,C21orf91,DYNC1H1,SMCHD1,DNAJB1,NCOR1,HSPA1A,RGS2,SON,HSPA1B,WHSC1L1,H3F3B,RSBN1L,LSM2,TAF1D,RBMX,TAGLN2,ANXA11,IFRD1,PTMA,GADD45B,VIM,WSB1,DNAJB6,HSPA4,HNRNPH1,ACTN4,HIF1A,GNS,PDIA3
Single-cell sequencing links multiregional immune landscapes and tissue-resident T cells in ccRCC to tumor topology and therapy efficacy,33861994,TAM ISGhi_PMID_33861994,Macrophage,IGFBP5,CRHBP,PLAT,LST1,EMCN,APOBEC3A,FCN3,MT2A,AQP1,MT1M,IFITM2,SLC9A3R2,IFITM3,IFI27,FCN1,MT1E,RAMP2,TIMP3,SOST,HLA-DQA2,G0S2,CLDN5,EHD3,FTH1,LILRB2,HLA-DRB5,FCER1G,CFP,AIF1,S100A9,BCL2A1,PLAUR,PPAP2B,LILRA5,GPR116,GNAI2,ID1,RBP7,C1QB,IL1B,STXBP2,COTL1,HMOX1,VAMP5,CLEC3B,C5AR1,FAM107A,S100A8,SOCS3,TIMP1,SAT1,MAFB,C10orf10,SPRY1,SERPINA1,FTL,C1QC,H3F3A,S100A6,TYROBP,OAZ1,FPR1,SOD2,IFITM1,CFD,EREG,RAMP3,EGFL7,PPP1R14A,HCK,TMEM88,TM4SF1,S100A4,FGR,HLA-DPB1,FAM26F,KLF2,HLA-DPA1,CST3,CSTA,TNFSF13B,TKT,HLA-DRA,HBEGF,FCER1A,PPAP2A,ETS2,C19orf38,NPC2,PILRA,TAGLN,MS4A7,CDKN1C,LIMS2,NTN4,GPX1,GNG5,SPI1,TMEM204,MGAT1,SRGN,GNB2,FCGRT,IFI6,RHOC,TSPO,ID3,TEK,HLA-DRB1,S100A11,RNASE1,NAP1L1,RAB31,CEACAM1,SDPR,HYAL2,C10orf54,CD9,ZFAS1,IL1R2,ICAM2,HLA-DMA,NINJ1,C1QA,RHOG,CDKN1A,MT1X,MGST2,CAPNS1,TSPAN7,SLC25A5,BST2,CEBPB,LRRC25,SLCO2A1,ARPC1B,CD81,PBX1,MEIS2,LGALS3,CARD16,HN1,ENPP2,GSTP1,TM4SF18,RAB13,RILPL2,FOSL2,WARS,POU2F2,PPIF,TNFRSF1B,KCTD12,LILRA3,AP1S2,CD14,MARCKS,LYN,FAM167B,ITM2B,CEBPD,TGFBR2,NPDC1,CTSZ,INSR,CD1C,GSN,MIDN,PYCARD,STX11,ZBTB16,COX8A,UPP1,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,CD4 T-cell_PMID_34019793,T cell,IL7R,ZFP36L2,LTB,CD52,CXCR4,TSC22D3,BTG1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,Treg_PMID_34019793,T cell,IL32,BATF,LTB,DUSP4,TRAC,TRBC1,PMAIP1,TIGIT,TNFRSF18,CD2,CARD16,CD27,S100A4,TNFRSF4,ARID5B,UGP2,CD3D,ICOS,TRBC2,RGS1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,NK cell 1_PMID_34019793,NK cell,GNLY,GZMB,NKG7,KLRD1,PRF1,FGFBP2,SPON2,KLRB1,CCL4,CTSW,CD7,CMC1,CST7,AREG,KLRF1,CLIC3,PLAC8,CD247,HOPX,UBB,CREM,GZMH,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,NK cell 2_PMID_34019793,NK cell,GNLY,CCL5,CD7,CTSW,NKG7,KLRB1,KLRD1,HOPX,GZMB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,Macrophage_PMID_34019793,Macrophage,APOE,C1QB,C1QA,APOC1,C1QC,CCL3,HLA-DRA,CD74,HLA-DPA1,HLA-DRB1,FTL,HLA-DPB1,CST3,RNASE1,HLA-DQA1,NPC2,HLA-DQB1,IER3,PSAP,CTSB,CXCL3,MS4A6A,CXCL8,MS4A7,EGR1,FOS,GRN,CTSD,HSPB1,CD14,GPR183,CCL4,HLA-DMA,TYROBP,FCGRT,NFKBIA,CD68,CD63,CD83,HLA-DMB,CTSZ,RHOB,A2M,HSPA1B,S100A11,MS4A4A,TNF,CAPG,FCER1G,AIF1,FOSB,CD9,FCGR2A,GPNMB,CD163,NEAT1,LYZ,CXCL2,IL1B,CTSL,HERPUD1,HSPA1A,MARCKS,C3,ATF3,GSN,PLAUR,PPP1R15A,PLD3,TREM2,LGMN,TMEM176B,GADD45B,CPM,SGK1,MAFB,CEBPD,PDK4,VSIG4,KLF4,HSPA5,DAB2,GLUL,ITM2B,CFD,LGALS1,FCGR3A,ZFAND5,SPP1,SLCO2B1,LIPA,TGFBI,LGALS3,AKR1B1,RNASE6,HMOX1,CCL20,ICAM1,FGL2,NFKBIZ,MSR1,GPR34,TYMP,KCTD12,JUN,YWHAH,SOD2,FOLR2,PLTP,CTSS,DUSP1,TUBA1B,ABL2,ANXA2,RNASET2,SAT1,CTSC,SLC40A1,HSP90B1,CSTB,CD81,FCGR1A,SDS,PLIN2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,Monocyte 1_PMID_34019793,Monocyte,HLA-DPB1,HLA-DRA,CST3,HLA-DPA1,HLA-DQA1,CD74,HLA-DRB1,HLA-DQB1,FCER1A,GPR183,LYZ,C15orf48,G0S2,MS4A6A,C1orf162,HLA-DMA,PLAUR,CEBPD,NPC2,RNASE6,CD83,INSIG1,HLA-DMB,BASP1,IER3,FTH1,GRN,AREG,SAT1,TYMP,CXCL8,NFKBIA,CSF2RA,GSN,CXCL16,TYROBP,BCL2A1,HERPUD1,AIF1,CLEC10A,PKIB,NR4A3,EREG,IL1R2,IL1B,NEAT1,CPVL,LST1,FCGRT,KLF4,NLRP3,CD1C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,Monocyte 2_PMID_34019793,Monocyte,S100A9,S100A8,CXCL2,IL1B,LYZ,CXCL8,THBS1,EREG,SOD2,TIMP1,CCL20,G0S2,SAT1,NAMPT,PLAUR,BCL2A1,FCN1,S100A12,CEBPB,CTSS,S100A6,TYROBP,OLR1,NEAT1,C5AR1,LST1,NLRP3,FCER1G,CSTA,VCAN,MAFB,FTH1,IER3,AQP9,FTL,MT2A,PPIF,ACSL1,CD55,AIF1,SERPINA1,BASP1,THBD,S100A4,LIMS1,CXCL3,ATP2B1,PLEK,C15orf48,SERPINB9,PSAP,VEGFA,SAMSN1,SRGN,COTL1,CDKN1A,S100A11,NFKBIA,VMP1,LGALS1,PLIN2,STXBP2,MAP3K8,BRI3,ETS2,PNRC1,TSPO,DUSP6,ASAH1,KDM6B,SLC11A1,CLEC4E,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,Monocyte 3_PMID_34019793,Monocyte,LST1,TIMP1,AIF1,SAT1,MT2A,IL1B,BCL2A1,FCER1G,COTL1,FCN1,CTSS,SERPINA1,HSPA1A,NEAT1,MS4A7,FTH1,IFITM3,G0S2,CFD,FCGR3A,TYROBP,STXBP2,LILRA5,FTL,PLAUR,C5AR1,ASAH1,LILRB2,PSAP,S100A4,SOD2,IFITM2,HES4,NAMPT,CD55,S100A6,EREG,S100A11,HSP90AA1,HSPB1,IFI30,CCL20,CFP,WARS,ZFAND5,RNF144B,BRI3,CEBPB,SPI1,MAFB,LIMS1,NR4A1,CEBPD,EMP3,SAMSN1,CD68,STX11,NFKBIZ,TKT,KYNU,NFKBIA,FGL2,CSTA,CLEC7A,BID,ITM2B,FAM49A,TYMP,RHOC,LYN,PILRA,CST3,ZEB2,DUSP1,NLRP3,VAMP5,OLR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,CD8 T-cell 1_PMID_34019793,T cell,GZMK,NKG7,DUSP4,GZMA,CCL5,CST7,CD27,CD3D,TRAC,TRBC2,LAG3,ITM2A,CD8A,CD2,VCAM1,IL32,RGS1,PARK7,TRBC1,HLA-A,CMC1,TNFRSF9,STMN1,PMAIP1,HIST1H4C,LYST,CRTAM,CXCR4,CD8B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,CD8 T-cell 2_PMID_34019793,T cell,HSPA6,DNAJB1,HSP90AA1,HSPA1A,HSPA1B,GZMB,HSPE1,DNAJA1,HSPD1,CCL5,HSP90AB1,ZFAND2A,RGS2,SRSF7,UBB,HSPH1,DUSP4,PMAIP1,CACYBP,ZNF331,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,B cell_PMID_34019793,B cell,IGKC,IGLC2,IGHA1,JCHAIN,MS4A1,CD74,CD79A,HERPUD1,LY9,CCR7,IRF8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,Mast cell_PMID_34019793,Mast cell,GPX3,MT1G,CYB5A,FXYD2,HPGD,CLU,PEBP1,MT1X,CD69,SPP1,LAPTM4A,CD63,GATM,MT1E,IGFBP7,LMNA,PLIN2,LTC4S,GLUL,TMEM176A,PRDX1,CAPG,MT1F,ALOX5AP,RGS2,TXN,AREG,FTH1,TSC22D1,CD24,FBP1,SUCLG1,GLRX,LGALS3,PDK4,CYSTM1,FOSB,H3F3B,SERPINA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_CD4 T-cell_PMID_34019793,T cell,FLT3LG,PASK,IL7R,ZNF165,LTB,LEF1,CCR6,P2RY10,S1PR1,INPP4B,GPR171,AQP3,ZNF90,CD28,SELL,HOMER2,ZNF831,CCR7,TNFRSF25,CASK,ZEB1,SCML1,SLAMF6,CALCRL,ZNHIT6,EEF2,MYCBP2,TCF7,HINT1,PIK3R1,HIST1H4C,NACA,PBX4,FXYD7,EID2B,SVIP,ARHGAP15,BACH2,NDFIP1,APAF1,CAMK4,SLAMF1,SLC23A2,NPFFR1,NPM1,CLEC2D,FLT3,CD300LB,RHOH,UBA52,RORA,SPOCK2,GATA3,GNG4,MS4A1,ZNF200,CHN1,PFDN5,ZDHHC16,BTF3,STK17A,CD40LG,SCML4,SOCS1,PML,TBC1D19,ARID5B,RCAN3,PDLIM1,STXBP3,GPR18,CDC42SE2,ST18,TRAT1,ICOS,CXCR4,RASA2,PHF6,IFT57,IPCEF1,PBXIP1,LDB2,BCL11B,KLF3,TSHZ2,RAP2B,SMAGP,ZNF444,PLP2,TC2N,CD226,APOBR,ZNF644,C1QBP,ELP2,TNFRSF4,RRAS2,SLC4A10,ZC3H12D,KMT5C,ANK3,DEF6,ITGB7,ZNF44,ITK,MAP3K14,ZNF296,IL18R1,CD79A,CHAF1A,CD2,S1PR4,DPP4,LAX1,LRBA,CD3E,HABP4,HLA-DOB,PPP1R16A,FYN,ZC3H15,CLECL1,PPP2R5C,ZCCHC7,RGS14,CYSLTR1,CD3D,NET1,TRAF4,RASGRP1,MAP3K1,CIC,SPRY1,ACAP1,CD3G,FURIN,HOMER1,SSBP3,LBH,RAB14,KLF12,MCC,DAPP1,SLC38A1,CASP8AP2,LCK,ZBTB10,CALM1,SP100,CD1C,PHF1,CD96,KMT2A,SEMA7A,ACVR2A,CXCR6,HNRNPUL1,PIM2,CCDC88C,MYNN,CD5,CGGBP1,TRIM28,KLF13,ZMYND11,LAT,SKAP1,ZNF611,PRDM2,CEBPZ,SCX,RALA,VCL,G3BP1,RND1,MED19,FUT8,GPR174,SKI,ZNF441,DGKE,ZC3HAV1,MYBL1,ASH1L,CBFA2T3,KCNK6,SPIB,ZNF740,CHD7,TUT4,SUPT16H,KRAS,CSDE1,PDE3B,MPHOSPH8,SEMA4D,ZNF141,TDG,ZDHHC2,IKZF3
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_Treg_PMID_34019793,T cell,FOXP3,CNIH1,PLXNA3,RAB33A,TBC1D4,RTKN2,CTLA4,ZNF254,STAM,ATP5F1A,NDFIP2,ZBTB20,PRDX2,P2RY6,SLC2A1,RAB14,BATF,MTF2,UBE2L3,ZBTB32,CX3CL1,XRCC5,SIT1,LAT,LCK,RAB8A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_NK cell 1_PMID_34019793,NK cell,CTBP2,ARID3B,NCR3,ASCL2,CD244,KIR3DL2,KIR2DL1,ADGRG1,MLC1,TLE1,CLIC3,ZDHHC4,TMED1,HES6,MAPK1,CARD11,GNGT2,TFDP2,S1PR5,ZNF7,PTPRA,FEZ1,AXIN1,BRD8,PRF1,GZMB,CD160,MATK,PDIA3,KMT5B,KLRF1,PTGDR,ZBTB16,SIPA1,KIR2DL3,KLRD1,ZNF322,CD247,OSTF1,BUD31,CD38,NCAM1,HOPX,CD47,AES,TXK,KLRC2,SDF4,NCR1,TMIGD2,RAMP1,CNOT2,DGKQ,BPTF,TBX21,ZMYM4,IKZF2,RRBP1,SIGIRR,PILRB,MCTP2,CD7,HIPK2,PITPNC1,YES1,EBP,DMAP1,ADCY7,KLRC1,SEC14L2,GTPBP1,S1PR2,ABCB1,ZNF571,ADRB2,POLR2K,FUBP1,FCGR3A,CHMP4A,TAF3,DTHD1,RAB8B,POLR2A,CCND3,RBL1,ATRX,IL2RB,ARFGAP2,ZNF683,ARHGAP45,CDYL,ARHGEF12,ADTRP,RAB39B,DOK2,F2R,GTF2H2,UBB,HOXB2,DUSP10,FASLG,EZH1,TXNDC12,IL27RA,CEP57,TNFRSF18,LYPD2,ZNF688,CRY2,E4F1,RTKN2,NPAT,KLF16,SIRT7,REST,PTPN11,NFATC3,ZNF326,SETD2,GZMA,RYK,SPRY2,SLC20A1,MED29,NCK1,PLCG2,TSC22D4,UAP1,KLF11,CDK9,HSPD1,HSP90AA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_NK cell 2_PMID_34019793,NK cell,IGFBP2,ADGRG3,CSF1,KLRC1,SYTL2,E4F1,TNFRSF18,ZNF683,SLCO3A1,NCR1,KLRC2,SEC14L2,ADTRP,ABCB1,GTPBP1,TMIGD2,RGS16,IL12RB2,IL27RA,PRKCQ,IL2RB,CD7,TBX21,PTPN11,TXNDC12,CCND3,DGKQ,BCL9L,EPHA4,KLRD1,ADRB1,BRD7,RAB39B,KLRB1,ZMYM4,KLRF1,CD38,HOPX,SETD2,NECTIN3,CD247,SDF4,TAF3,POLR2A,ATRX,PITPNC1,KLF13,PPP2R2B,ATP8B4,STAM,YEATS4,DMAP1,ZNF675,MYBL1,ADCY7,ARHGEF12,CEP57,AES,MATK,PDE3B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_Macrophage_PMID_34019793,Macrophage,MERTK,TREM2,TLR5,SLC40A1,ZDHHC14,IGF1,SOCS6,TSPAN15,LILRB5,CD209,SLC7A8,ADAP2,DAB2,KCNMA1,SLCO2B1,SDC3,SLC1A3,FCHO2,ZNF358,TSPAN4,GLMP,EYA2,FAM120B,MMP14,FFAR4,ABI1,LGALS3BP,ITGB5,PLXNA1,P2RY11,TNFRSF11A,RB1,PLXND1,MITF,CCL18,SIGLEC9,STAB1,IFI27,SPRED1,PDPN,CD81,SIGLEC8,LPAR6,GPR34,CPM,SREBF1,APOE,CD59,PMP22,MGST3,ZNF568,LYVE1,EBI3,P2RX7,IL2RA,SLC38A6,CSF1R,HOMER3,ANG,ARHGEF10L,TNFSF12,ARHGAP18,USF2,SCARB1,CCL8,CREBL2,ADORA3,PLEKHG5,BST2,CMKLR1,IFITM10,EPHB2,LAMP2,DMD,TGFBR1,ZMYM3,BAZ2B,RHOU,ZNF618,PDGFC,DAPK1,TCF4,P2RX4,ATP6AP2,LRP1,RAPH1,CD72,TDP2,PTAFR,OAS3,BLNK,ADIPOR1,HRH1,ICAM5,P2RY13,FARP1,ARNT,LILRB4,SWAP70,LY96,MSR1,ATF6,PLAU,GPX1,MIER2,MS4A4A,FOXN3,CHKA,NRP2,MACC1,GNB4,ITPR2,AOC1,ZFHX3,WWTR1,FCGR1A,C3AR1,HLA-DOA,GFRA2,FPR3,FCGRT,TNF,MPP1,RND3,ALOX15B,ETV5,ACKR3,RASAL2,SRGAP2,HELZ,TCEAL4,MKNK1,BHLHE41,DNMT1,DST,TXNDC17,CHURC1,IRS2,SHB,SMURF2,ENPP2,CDC42EP1,WLS,ANKDD1A,KCNJ16,MGST2,CD68,CCND1,ADRA2B,ARL5A,CD83,FOLR1,MRC1,RAPGEF5,APH1A,AFF1,COLEC12,RDX,ITSN1,SDC2,ZNF503,VPS36,ABCA1,ANK2,APOLD1,FMNL3,TLR1,ATP2A2,CD163,MINK1,CRYL1,ADAMTS1,FCGR2A,GRN,COPS5,TJP1,GTF2I,ZNF22,CLU,CTNND1,PACSIN1,SLC18A2,PCBD1,PARP14,ABL2,ELMO1,CAVIN1,TSPAN6,GNG12,YWHAH,NFE2L1,ALCAM,CHD9,CD14,PRMT6,BTK,ZMYND15,KCNMB1,SLC8A1,NDUFS4
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_Monocyte 1_PMID_34019793,Monocyte,PAK1,CHRNE,GPR157,FCER1A,FCGR2B,ZNF710,ETV6,IL13RA1,HAS1,AFF3,ZBTB46,GPR160,MALT1,ICOSLG,CXCL16,BCL11A,HDAC6,ZNF592,RGS10,AXL,AKAP12,AGPAT1,MLLT3,ST14,SYK,TCEAL1,SH3GL1,SNCA,CTSH,ZCWPW1,ASAP1,GSN,PBX2,BCL7A,TRIM22,RAB32,CD74,TMEM97,NECTIN2,TRIM16,KAT2A,CIITA,FGD2,NCS1,MNT,TMEM50B,GNG7,SLC35B2,TNNI2,ZNF100,MYCL,TRIP10,TBC1D17,ZNF691,HBEGF,ZMYND15,PRMT6,CARF,ZNF765,ALCAM,PPT1,TACSTD2,LY86,PRMT1,EHF,CD40,PPARD,ZNF428,CTNND1,ZNF189,BCAR3,CSNK2B,TSPAN33,KRT19,RGS18,CCDC88A,MS4A6A,PTPN1,YWHAH,RAB7B,SORT1,RCC2,KCNMB1,GPR132,RASGRP3,CHN2,SIRT5,AP3S1,LZTR1,NUP62,ZRSR2,SPIB,CADM1,CRTC3,LRPPRC,RAB31,MINK1,STX3,RAC1,RAB9A,MGST2,ZNF518A,RALA,RAB38,AIDA,PLSCR1,RAB11A,LMCD1,CCND1,TLR1,FCGR2A,ARL5A,CCR5,TGIF2,PLCD1,NONO,MYO10,BHLHE41,GNAI2,SMURF2,PHB2,FXYD6,GRN,CD83,ELK3,ACKR3,ZNF211,AFF1,SLC8A1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_Monocyte 2_PMID_34019793,Monocyte,S1PR3,ZNF697,TAF13,HOXA5,EAF1,MCTP1,PLXNC1,PLD1,RIT1,PADI4,ADORA2B,SMARCD3,GJB2,CD36,MSC,ITGA5,ZFR,MDM4,ECE1,TFDP1,LPXN,APP,ITGB8,STRN3,SERPINB2,NRGN,ZFYVE16,HIVEP2,IL6R,MAP3K20,F3,ERBIN,TFCP2,ANTXR2,BLOC1S2,FOXK2,SLC7A11,ATP2B1,AGFG1,SERTAD2,HCFC1,THBS1,XRN2,DUSP6,SPG21,GAS7,ZNF668,CLEC4A,AQP9,CCR1,FLT1,PLPP3,LTB4R,KCNN4,APLP2,LIF,PLEC,HTATIP2,TNFRSF1A,NAMPT,CD93,PRDM8,ZBTB43,CREB5,TREM1,NOTCH2,ETS2,MPP7,EREG,HLX,FCAR,BASP1,RASSF3,FPR1,IFNB1,ACSL1,TLR2,PTPRE,VNN2,TNFAIP6,MTF1,CLEC4E,RB1CC1,CD300E,CLEC4D,ITGAX,CD80,ITGAM,IL1RN,PLAUR,RHOQ,MNDA,IFNGR2,MARCO,DNAAF1,SOD2,IL1B,EFR3A,CCRL2,ELK3,C5AR1,IRAK2,SLC11A1,PTPN1,OLR1,PTPN12,LIMS1,TLR4,PLSCR1,CRADD,GAB2,HCAR2,AGTRAP,CARD19,GCA,SLC43A2,ZNHIT1,FADS1,RAB7B,SLC39A8,SRC,SDCBP,LRRK2,ZNF577,IRAK3,CLEC7A,RASGRP3,NOCT,CDA,ILK,TGIF2,FGD4,MARCKS,MEF2D,TGM2,MAFB,RAPGEF2,SLAMF7,FGR,ZNF765,TAB2,NCOR2,CASP1,ELL,TNFSF13B,FCER1G,FPR2,SLC7A7,PIK3AP1,GPR132,CLEC12A,ZNF267,NELFE,ATP6V1B2,CYBB,NFKBIB,RAB31,STX3,RXRA,IGSF6,ADGRE3,ZYX,MED28,NFKBIA,CD4,IL10,ZSWIM6,PHF19,TFEC,BEST1,LTBR,LILRB3,BCL11A,SLC24A4,SIGLEC7,BCKDK,HSBP1,TNFRSF10D,ZNF655,TYROBP,SIRPB1,AZI2,PHB2,ADGRE2,PTGIR,RHOA,PSEN1,CD151,ZDHHC20,CRTC3,MYD88,HBEGF,SECTM1,IL4R,FGD2,CD14,RAP2C,RAB9A,NONO,GABARAP
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_Monocyte 3_PMID_34019793,Monocyte,LILRA1,RRAS,LILRB1,PAG1,ZNF703,FLII,MAPKAPK3,CDC42EP2,MARK2,PRAM1,CSK,FFAR2,ADGRE1,CNIH4,PKN1,RIN2,TCF7L2,PCGF5,SMAD2,MDM2,P2RY1,ARRDC1,UNC119,GPBAR1,NACC2,ZNF593,INPP1,LMO2,RALB,APH1B,ZDHHC1,RHOG,ANKRD13A,VAV1,KCNJ2,SH3BP2,STAT2,JUP,PTGES,PECAM1,LILRB2,C1D,COL4A3BP,LYN,P2RY2,NLRC4,ARHGAP27,ADA,LILRA2,PDPK1,ZBTB7A,P2RX1,ADNP2,VAV2,SPATA13,RAB10,ZDHHC20,CUX1,SECTM1,PPP1R17,TBC1D2,OLIG1,PTGIR,RAP2C,LILRB3,PSEN1,BEST1,SIRPB1,HSBP1,RXRA,ICAM2,RASGRP2,VNN1,MYD88,ADGRE2,FPR2,ADGRE3,NCOR2,PIK3AP1,SLC24A4,NELFE,ZYX,CYSLTR2,CASP1,CD79B,PHF19,ARRB2,FGR,ZNRD1,NOCT,PFDN1,TGM2,PILRA,IRAK3,ANXA4,RAB8A,CDA,DAAM1,CLEC12A,CD151,CARD19,CRADD,TNNI2,RHOA,AGTRAP,GCA,MEF2D,SLC7A7,AZI2,RGS18,GNAI2,ZNHIT1,RAB11A,NEDD9,TSPAN14,BATF3,STAG2,FCER1G,SPI1,FAM126A,SRC,TNFSF13B,BTK,ZSWIM6,SLC43A2,IFNB1,SLAMF7,NOTCH2,RGS19,MTF1,CYBB,TNFAIP6,IFNAR1,DNAAF1,LIMS1,CERK,ASXL1,ZBTB43,MARCO,BCKDK,ATP6V1B2,RASSF3,TLR4,CLEC7A,OSTF1,HTATIP2,MAFB,IGSF6,SIGLEC7,TYROBP,CD47,SPRY2,SLC44A2,CD300E,E2F7,ARHGAP29,CCRL2,VNN2,SNAP23,LRRK2,NFYC,YWHAG,FFAR3,GABARAP,PTPN12,NUDT4,MARCKS,FPR1,YES1,C5AR1,SLC11A1,FGD4,BAG3,SH2B2,ITGAX,DEDD2,PINK1,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_CD8 T-cell 1_PMID_34019793,T cell,TOX2,GDI1,TBC1D2B,NAB1,PEX14,HIF1AN,CARHSP1,LAG3,STAT5A,ZNF226,ZCCHC2,CD82,VCAM1,MED25,CD200R1,HMMR,ZBED2,SNAP47,MYBL2,MLLT6,ITGB3BP,CHST11,CDK2,SMC1A,SIRT2,KNTC1,MAP2K7,RASAL3,MAP3K11,WNK1,MCM5,CASP3,WSB2,CRTAM,PTTG1,PPIL2,KIF14,ADRM1,ZBTB32,CDCA5,EOMES,UHRF1,FOXM1,ZFYVE28,PTK2B,CDKN2A,MCM7,FANCI,ZNF726,ATAD2,DGKH,PRC1,MAZ,CHEK1,HIRA,SUZ12,ZNF708,ARHGAP35,AIP,MCM4,TRIP4,ZBTB38,RACGAP1,ELMSAN1,RCCD1,PARK7,HACD3,NDC80,MCM6,PDCD1,TTF2,ASF1B,SEMA4A,MXD3,UBE2L3,ZNF367,TYMS,GON4L,BRCA1,BANP,GTSE1,CENPU,CASZ1,ABR,CD8B,RANBP1,FEN1,SIRPG,ZWINT,CD8A,PSMC3,RICTOR,UBE2C,CD27,PSTPIP1,HDGF,COPS2,ZNF573,VCP,FANCG,ASXL2,MAP2K2,CTLA4,PON2,TERF2IP,SLC1A4,ORC6,PARVG,SMC3,DEK,NCOR1,ATP11B,PDCD10,BUB1B,BATF,ELP5,TAF4B,POU3F1,TERF1,ARHGAP25,ATF6B,DUSP16,BAX,SUMO1,CENPK,MAPK14,SYT11,PSMC3IP,XRCC6,PGRMC2,TOP2A,PARD6G,SIVA1,APBB2,PPP1R12A,MCM3,CAV1,KIF13B,AP3S1,PPP1CA,SIT1,XRCC5,SERTAD3,PPP4C,TCF19,SSRP1,DERL1,CBX5,RAF1,CNIH1,ZNF138,PCNA,POLR3F,ZDHHC24,EZH2,ILF2,HNRNPD,CENPF,FKBP8,CCNA2,TRPC4AP,RYR1,SLA2,ZNF655,E2F1,CIDEB,ATP5F1A,NFATC2,PIN1,ARHGEF39,SMARCA2,EIF4EBP1,ENO1,TSC22D4,BRCA2,PRMT1,THAP1,ELOVL4,HBS1L,KIR2DL4,CBX6,TSHR,NR5A2,PAFAH1B1,NDFIP2,RHEBL1,CXCR3,F2R,DTHD1,DNAJC1,GZMA,CPNE3,HSD17B10,AP2B1,SLC2A8,BLM,NEDD9,CADM1,SPAG5,ASXL1
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_CD8 T-cell 2_PMID_34019793,T cell,HSPD1,TAF6L,KLF16,DBP,ZNF326,NKRF,TAF7,SLC39A6,SLC5A3,HSP90AA1,SLC26A2,DEDD2,NFATC3,BCL10,HSD17B7,UBB,FFAR3,ZFAND2A,CCT3,BAZ2A,HDAC9,P2RY14,HSPB1,SLC20A1,TSPYL2,S1PR2,DOK2,SNAP23,HEXIM1,CASS4,L3MBTL3,RASL11A,BAG3,POU2F1,UBC,NEU1,SOD1,DNAJB4,NR4A1,MNAT1,YWHAG,TNFSF9,E2F7,ATF3,RGS19,IL16,HDAC5,PKNOX1,DDIT3,IL18RAP,NCK1,ZNF821,NUDT4,IFNG,CSF1,RASSF1,PLCG2,TOPORS,ARL4D,FLI1,TONSL,UAP1,SNAPC2,CXCR1,ZNRD1,RASD1,STIM2,VHL,ZHX1,RYK,RHOB,ZC3HAV1,KLF11,PLK2,RLF,SNAP47,CTNNAL1,OLIG1,POU3F1,BATF,SLC38A2,CBX4,ARC,DAAM1,ZNF131,RAF1,PGRMC2,DGKH,SERTAD3,MYLIP,MTERF2,PLEKHO1,EPHB6,CRTAM,ING2,MTDH,PRX,GON4L,COPS2,TRPC4AP,INTS6,PEX14,SEMA4A,SH2B2,DUSP10,AKAP10,H2AFX,ZBTB20,HIRA,HOXB2,TSC22D4,ZNF844,PARD6G,ZMAT5,ZFAND6,CD82,WNK1,KRAS,POLR2K,PPIL2,DUSP16,HACD3,DOK1,MAF1,RSF1,ZNF846,EOMES,ZDHHC2,ZNF573,VCAM1,CD8B,ZNF791,ZCCHC2,ZNF708,CD27,SIRT2,SLC1A4,PDCD1,ZBED2,FGD3,ARHGAP5,IRF2BP1,SUPT7L,ZFYVE28,ZNF429,TRIB2,MAML1,IRF9,CHST11,SIRPG,LMO4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_B cell_PMID_34019793,B cell,ZNF567,GNG7,ZNF141,SH3GL1,TSPAN33,CHD7,MYCL,SEMA4D,P2RY6,EDRF1,LAMP5,CPNE3,MLLT3,TFPT,SPIB,PRMT1,SMAGP,PLXNA2,RALGAPA2,ZDHHC16,CHN2,PHF6,MAML1,ZNF250,TAX1BP3,FAM126A,CBX6,RASGRP4,ZNF429,MTF2,SFMBT1,C1QBP,ZNF211,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell protein activity analysis identifies recurrence-associated renal tumor macrophages,34019793,VIPER_proteins_Mast cell_PMID_34019793,Mast cell,SLC22A2,SLC3A1,CRYAB,RCAN1,CALD1,PDZK1,PPFIBP1,CXCL14,SOX9,FZD1,ANGPTL4,CAV2,MXI1,HPN,TFPI,BNIP3,TM7SF3,KIT,CLDN4,CD24,PLEKHA1,GGT1,MS4A2,RASGRP4,TCEA3,NTM,SNX4,GNG11,IMPA2,EMX2,POLR2I,TCEAL8,IL1RL1,PLPP1,NPR3,ANXA4,ESD,ZNF48,RUVBL2,PRDX3,ZNF677,ZCCHC3,ELF3,PFDN1,PHB2,PHB,TRIP6,CAMLG,DDX1,FXYD2,CLU,KCTD1,PRKD3,TSPAN1,TSPAN6,NDUFS4,ADAM12,GPR82,GATA2,HPGDS,RDX,GRAP2,ZNF580,LMCD1,HEY1,FHL2,PRDX2,SLIRP,CAVIN1,TNS2,POU3F3,MT1H,GPRC5C,CAMTA1,S100A16,RAB38,GNG12,CD151,DCDC2,CRYL1,ADCY7,RGS13,SPTBN1,ARL3,AGPAT2,FOXC1,HRH1,FSTL1,VPS36,APH1A,TADA3,PCBD1,PPP1R16A,ABCC4,NISCH,TDG,MYO1C,SLC18A2,CDC42BPB,AOC1,TACSTD2,KRT19,CCDC88A,RAPGEF5,HIPK2,AFAP1L2,EIF4EBP1,ARHGAP29,CDCA7L,PRX,KRT1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD4/Exhausted Markers_PMID_35013146,T cell,BTLA,TIGIT,HAVCR2,PDCD1,CTLA4,LAG3,ITGA4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD4/Cytotoxic Markers_PMID_35013146,T cell,CST7,IFNG,NKG7,PRF1,TNFSF10,GZMA,GZMB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD4/PD-1 and Interferon Gamma Markers_PMID_35013146,T cell,CD274,HLA-DPA1,HLA-DPB1,HLA-DRA,HLA-DRB1,HLA-DRB5,STAT1,MT2A,HLA-A,HLA-B,HLA-C,HLA-E,HLA-F,HLA-G,ICAM1,CD44,GBP2,GBP4,GBP5,TGFBR1,TGFBR2,ENTPD1,GZMK,TGFB1,TGFB2,CXCR4,IFNGR1,IFNGR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD8/Exhausted Markers_PMID_35013146,T cell,BTLA,TIGIT,HAVCR2,PDCD1,CTLA4,LAG3,ITGA4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD8/Cytotoxic Markers_PMID_35013146,T cell,CST7,IFNG,NKG7,PRF1,TNFSF10,GZMA,GZMB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD8/PD-1 and Interferon Gamma Markers_PMID_35013146,T cell,CD274,HLA-DPA1,HLA-DPB1,HLA-DRA,HLA-DRB1,HLA-DRB5,STAT1,MT2A,HLA-A,HLA-B,HLA-C,HLA-E,HLA-F,HLA-G,ICAM1,CD44,GBP2,GBP4,GBP5,TGFBR1,TGFBR2,ENTPD1,GZMK,TGFB1,TGFB2,CXCR4,IFNGR1,IFNGR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD4_cluster1_PMID_35013146,T cell,LEF1,CCR7,FOS,CD28,CD4,CD40LG,FOSB,IL6R,IL7R,JUNB,JUN,TESPA1,SLC2A3,ZBTB10,GPR183,DPP4,IRS2,LTB,PDE3B,INPP4B,DDX3X,TMEM123,CTSB,TCF7,TUBA1A,CYLD,NELL2,RGS16,DGKA,PAG1,GADD45G,CCDC109B,HIVEP2,SORL1,ANXA1,CHN1,LRRC8D,CYB561,ITGA6,SATB1,EGR1,LDHB,FAM65B,SELL,BCAS2,CHD7,ETV3,MASTL,SESN3,NR1D2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD4_cluster2_PMID_35013146,T cell,MTRNR2L1,MYO7A,GNA15,NTRK2,RBPJ,SPOCK2,CXCL13,CREM,PPARG,MAF,MSC,CXCR6,SH3TC1,ADAM12,RP3-428L16.2,PLIN2,CTSH,PTPN13,KLRB1,FURIN,CTLA4,TRPS1,MCAM,AGPAT5,FNBP1,TP53INP1,USP36,CD4,ADAM19,JMY,RORA,GSPT1,IRS2,NAB1,NR3C1,CENPF,TMIGD2,SESN3,ZEB2,ERN1,LIMA1,TOPORS,CCR4,KPNA2,THBS1,BCL2L11,GBP5,MT1E,MKI67,MT2A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD8_PMID_35013146,T cell,CCL5,CD8A,CCL4,ITGA1,ZNF683,CRTAM,GZMK,IFNG,CD8B,AUTS2,NR4A2,SLAMF7,ZFP36L2,GZMH,ITM2C,FASLG,SPRY1,THEMIS,XCL2,PIK3R1,GZMB,XCL1,TRGC2,EPAS1,CCR5,IGFBP3,PTGER4,HOPX,AOAH,MAP3K8,TBCD,GABARAPL1,NR4A3,CD101,YBX3,CCL3,ARHGAP26,SLA,ARHGAP9,RASGEF1B,ARL5B,IRF4,CD81,APOBEC3G,RMND5A,EGR2,GRAP2,C12orf65,ENC1,LDLRAD4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,NK-cell_cluster1_PMID_35013146,NK cell,FGFBP2,FCGR3A,S1PR5,CX3CR1,ITGAM,PRSS23,PLEK,GPR56,VCL,C1orf21,SLCO4C1,GNLY,SPON2,NKG7,FGR,PLAC8,PRF1,TGFBR3,KLRG1,TYROBP,ENC1,GZMB,SYNE1,EFHD2,ITGB2,PLEKHG3,FAM65B,BPGM,GZMH,PTPN12,FCER1G,GZMA,LPCAT1,KLF3,FLNA,RAB7L1,FCRL6,CST7,GNPTAB,ITGB1,MYBL1,LITAF,SH3BP5,NCAM1,P2RY8,CTSW,ZEB2,GNG2,TPM4,CD247,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD8_cluster3_PMID_35013146,T cell,SLC4A10,LTK,IL17A,TMIGD2,PTPN13,DPP4,KIT,SCRN1,NCR3,IFI44,B3GALT2,KLRB1,CA2,NRIP1,LTB,CCL20,TNFSF13B,TIAM2,TNF,JUN,IKZF2,TNFRSF25,EGR3,ZFP36L1,HIPK2,CD40LG,PRR5,ABCB1,ANKRD28,AQP3,RORA,IFI44L,MAN1A1,PPP1R10,DUSP1,APOL3,SLAMF1,CITED2,PIK3AP1,EGR2,FOS,EGR1,ID2,TSC22D2,IER2,GADD45B,PNP,CD69,AHR,PHLDA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,Treg_PMID_35013146,T cell,FOXP3,RTKN2,IL2RA,ICA1,F5,VDR,CCR8,TBC1D4,TNFRSF4,IKZF2,IL1R1,CTLA4,LAYN,TNFRSF9,ENTPD1,TNFRSF18,TIGIT,LAPTM4B,TRIB1,INPP5F,FAM184A,MAST4,STAM,BATF,CCR4,SELL,CD27,TIAM1,PMAIP1,ARID5B,ZC3H7A,MAGEH1,PMCH,GEM,CD4,PELI1,CD28,GBP2,PHACTR2,DUSP4,CCNG2,IL6R,ACSL4,CARD16,NAMPT,PKM,GBP5,BIRC3,TTN,MT2A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,NKcell_cluster2_PMID_35013146,NK cell,B3GNT7,TRDC,KLRF1,KRT86,TYROBP,SYK,FCER1G,IRF8,ADAM28,NCAM1,LAT2,CD160,PLCG2,MAFF,CYSLTR2,IGF1R,MATK,CLDND1,PIK3AP1,SCRN1,TMIGD2,IL2RB,EOMES,SLFN13,PLAC8,KLRB1,ITM2C,KLRD1,GNLY,FBXO34,FOSL2,CD247,CCDC69,TCIRG1,RASGEF1B,CCL3,FAM177A1,RNF168,REL,SLAMF7,VPS37B,GFOD1,IFNGR1,PLEKHA2,PHYKPL,CEBPD,METRNL,KDM4B,PTPN12,LPGAT1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,CD8_cluster2_PMID_35013146,T cell,HSPA6,HSPA1A,DNAJB1,BAG3,HSPA1B,DNAJB4,HSPH1,HSP90AA1,SERPINH1,HSPD1,ZFAND2A,HSPE1,HSPB1,DNAJA4,HSPA8,TXNIP,ATF3,CACYBP,HSP90AB1,DNAJA1,DOK2,DEDD2,MIR24-2,FKBP4,UBC,UBB,FKBP5,NEU1,PPP1R15A,MXD1,RGS2,ANKRD37,CHORDC1,AHSA1,NR4A1,MB21D1,SAT1,SOD1,MYADM,HSPA4,DUSP1,HMGB2,TNFSF14,RHOB,GLUL,IER5,KLF2,PLIN2,CSF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,ERGneg_CD4_PMID_35013146,T cell,MTRNR2L1,CXCR6,DUSP4,ZEB2,TNFRSF1B,RBPJ,SPOCK2,MYO7A,CREM,FNBP1,MAF,TRPS1,PLIN2,GNA15,KLRB1,THBS1,USP36,NAA50,TMIGD2,IRF4,CTLA4,METRNL,RORA,GSPT1,TOPORS,FURIN,TP53INP1,HLA-DRA,ITGAE,IL17A,HLA-DPA1,ARHGAP18,GZMA,CTSH,CENPF,LIMA1,HLA-DQA1,HLA-DRB1,ADAM12,SH3TC1,RP3-428L16.2,GBP5,HLA-DPB1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial cell states,35013146,ERGpos_CD4_PMID_35013146,T cell,FOSB,FOS,JUN,ANXA1,NR4A1,GADD45B,NR4A2,DUSP1,HSPA1B,PPP1R15A,BRD2,TUBA1A,UBB,TXNIP,AHNAK,DDX3X,PCF11,EGR1,CD69,TSC22D3,ITGA6,ZFP36,TNF,KLF6,PPP1R10,TSC22D2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,CD14+_monocytes_PMID_33303760,Monocyte,RNASE1,FCGBP,C12orf57,LUM,STMN1,SERPINH1,A2M,COL1A2,SPARC,CLEC11A,COL1A1,S100A13,IBSP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,CXCL8+_monocytes_PMID_33303760,Monocyte,MALAT1,CCL3,JUN,CCL4,EGR1,CCL3L1,KLF6,NEAT1,CCL4L2,DNAJB1,HSPB1,CXCL2,IER3,PPP1R15A,CXCL3,HSPH1,FOSB,SOD2,NR4A2,KLF2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,M2_TAM_PMID_33303760,Macrophage,APOE,APOC1,GPNMB,CTSL,CTSD,PLA2G7,LGMN,CTSB,HMOX1,SLC40A1,FTL,LIPA,NUPR1,SELENOP,CTSZ,LGALS3,FABP5,PLIN2,SPP1,CCL4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,M1_macrophage_PMID_33303760,Macrophage,CXCL10,ISG15,IFIT1,IFIT3,IFIT2,TNFSF10,MX1,RSAD2,ISG20,IFI44L,HERC5,MX2,APOBEC3A,GBP1,OAS1,CCL8,IFI6,LY6E,IFITM3,IFI27,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,FABP4+_macrophage_PMID_33303760,Macrophage,FABP4,RETN,FOLR3,CES1,MARCO,MCEMP1,PDLIM1,INHBA,AC026369.3,CRIP1,FBP1,IGFBP2,GCHFR,CD52,CCL18,ALDH2,SERPINA1,FN1,LGALS3,TSPO,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,Neutrophil_PMID_33303760,Neutrophil,S100A8,S100A9,FCN1,G0S2,VCAN,LYZ,EREG,BCL2A1,S100A12,CD300E,CD52,IL1B,SERPINA1,NAMPT,OLR1,BTG1,SRGN,SOCS3,TIMP1,ZFAND2A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,CD14+/CD163+_DC_PMID_33303760,Dendritic cell,CKLF,PKIB,HMGA1,RAB13,GSN,S100A4,LGALS2,IFNGR1,CTSH,LYZ,MMP9,HLA-DRB5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,CD1C+_DC_PMID_33303760,Dendritic cell,FCER1A,CD1C,CLEC10A,CD1E,PKIB,JAML,HLA-DPB1,HLA-DRA,LGALS2,HLA-DQB1,HLA-DPA1,HLA-DQA1,FCGR2B,CD69,CD52,HLA-DRB5,LYZ,GPR183,PPA1,HLA-DQA2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,CD141+/CLEC9A+_DC_PMID_33303760,Dendritic cell,CLEC9A,IDO1,S100B,LGALS2,CST7,HLA-DRB5,CD52,PPA1,LTB,CPNE3,SUB1,BASP1,SNX3,AREG,IRF8,ARF6,C1orf54,ID2,HLA-DQA2,TXN,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,CCR7+_DC_PMID_33303760,Dendritic cell,CCL19,IDO1,CCL22,CCR7,LAMP3,CCL17,BIRC3,CST7,IL32,MARCKSL1,IL7R,EBI3,CRIP1,NUB1,BASP1,PPA1,BCL2A1,TXN,FSCN1,CSTA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,CD4+T_PMID_33303760,T cell,TPT1,IL7R,JUND,KLRB1,CD40LG,FOSB,TNFAIP3,LTB,ZFP36L2,AHNAK,IER5,FOS,BTG2,CEBPD,HBB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,CD4-/CD8-_PMID_33303760,T cell,S100A11,S100A10,TPM1,CLEC11A,LUM,BEX3,DPT,ANXA2,TCEAL9,PCP4,COL3A1,NDUFA4L2,SERPINH1,MORF4L2,MT1X,TCEAL4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,T-reg_PMID_33303760,T cell,TNFRSF4,IL2RA,FOXP3,TNFRSF18,TIGIT,LINC01943,IL32,ICA1,CARD16,BATF,LINC02195,DUSP4,LAIR2,RGS1,CD27,ICOS,PMAIP1,PIM2,GADD45A,GLRX,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,CXCL13+T_PMID_33303760,T cell,CXCL13,GNG4,IGFL2,NMB,TSHZ2,DUSP4,FKBP5,PDCD1,AC004585.1,SH2D1A,TIGIT,FABP5,CD82,RGS1,RBPJ,PGM2L1,EIF4E,ITM2A,PSMA2,G0S2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,CD8+T_PMID_33303760,T cell,GZMK,GZMH,CCL5,GZMA,CD8A,CD8B,CCL4L2,CCL4,CST7,HCST,KIAA1551,APOBEC3G,GZMM,LCP1,PTPRC,RNF213,AHNAK,CCL3L1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,NKT_PMID_33303760,T cell,FGFBP2,GZMB,FCGR3A,GNLY,KLRD1,NKG7,KLRF1,SPON2,PRF1,GZMH,PLEK,CST7,PLAC8,TYROBP,CTSW,CLIC3,CCL4,CD247,CCL3,CCL4L2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,NK_PMID_33303760,NK cell,XCL1,KRT81,XCL2,KLRC1,FCER1G,KRT86,TYROBP,CTSW,KLRD1,AREG,GNLY,CSF2,CD7,HOPX,NFKBIA,CCL3,DUSP2,RGS16,CMC1,CCL4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,B_cells_PMID_33303760,B cell,JCHAIN,TCL1A,BCL11A,TSPAN13,TCF4,HLA-DRA,CD74,IRF7,PLAC8,MZB1,UGCG,AREG,GZMB,HLA-DPB1,TYROBP,NPC2,HLA-DPA1,GPR183,TMEM107,ALOX5AP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA landscape of intratumoral heterogeneity and immunosuppressive microenvironment in advanced osteosarcoma,33303760,Proliferating T_PMID_33303760,T cell,TYMS,NUSAP1,MKI67,TOP2A,PCLAF,UBE2C,RRM2,TK1,HMGB2,STMN1,CENPF,TUBA1B,H2AFZ,SMC4,HIST1H4C,HMGN2,PCNA,PTTG1,UBE2S,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,B Cells_PMID_31980621,B cell,CD79A,MS4A1,BANK1,CD83,LY9,CD37,SMIM14,MEF2C,VPREB3,ADAM28,TCF4,ARHGAP24,LYN,KIAA0226L,CD55,CD52,CCR7,RALGPS2,LINC00926,EZR,SELL,CD19,TNFRSF13B,ID3,PDLIM1,BLK,LTB,PKIG,NR4A1,SYNGR2,CD74,CMTM6,HLA-DQB1,POU2F2,GPR183,HLA-DRA,FCMR,CCDC50,PRDM2,SYPL1,RILPL2,LDLRAD4,REL,NFKBID,SLC2A3,FAM49A,IRF8,ALG13,SESN3,DDX21,FAU,CD69,ORAI2,LY86,HERPUD1,FOXP1,ARHGAP25,PTPN1,ATP2B1,LAPTM5,HLA-DQA1,BIRC3,GLTSCR2,SMCHD1,TAGLN2,HLA-DQA2,TMEM243,CTSH,TOMM7,KDM6B,BTG1,ODC1,SNU13,NCOA3,EEF2,UBA52,CHCHD10,CD48,IGHA1,SMAP2,RAB11FIP1,WDR74,RHOH,PDE4B,LSM7,ZFAS1,YPEL5,PPM1K,CDKN1A,IL16,SP140,CD47,BACH1,NBEAL1,SMDT1,SNX2,MTRNR2L12,TCEA1,PNISR,SF1,STK4,SMARCB1,TNRC6B,TGIF1,KHDRBS1,SLBP,AC090498.1,RSL24D1,MAP3K8,SSH2,HLA-DRB1,GNB2L1,TAF1D,UXT,RP5-1171I10.5,PRNP,GRB2,TAGAP,ARF6,GPBP1,SKIL,PIM3,FBL,MBP,PTMA,LRRFIP1,CNPY3,CYBA,STK17A,SMG1,KMT2E,NR1H2,POLD4,NR4A3,HLA-DPB1,LIMD2,TUBA1A,MARCKSL1,ANKRD44,H3F3A,TSPAN3,PLP2,PFDN5,SEPT6,YWHAZ,HLA-DMA,RELB,NFKB2,EIF3E,COMMD6,NCF1,TXNIP,EMP3,ARID5B,SNX3,HLA-DRB5,TNFAIP8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,CD4 T Follicular Helper_PMID_31980621,T cell,TFAP2A,MLANA,BANCR,PMEL,AP1S2,TYRP1,IFI27,S100A1,KLRB1,GSTP1,EDNRB,PDCD4,TRPM1,TEX41,SNHG7,EFHD1,MITF,NR3C1,ZFAS1,FAM177A1,DUSP2,CNOT6L,MIF,TOMM7,IFITM1,NGFRAP1,RGCC,SNHG8,LEPROTL1,EIF4A2,CD52,DSTN,COMMD6,CTNNB1,NDUFS5,PTPN22,EPB41L4A-AS1,SDCBP,PIK3R1,ATP5G2,USMG5,TBCA,IL7R,GZMM,UQCRH,HSPB1,YPEL5,ARAP2,CD44,FDFT1,HMGA1,BTG1,UBL3,VIM,TRMT112,POLR2L,ZFP36L2,TRAT1,SOCS1,EIF3E,CD69,JUND,SSU72,N4BP2L2,TMEM258,PPP1CB,KRT10,METTL9,GNB2L1,EML4,FAU,EIF2S3,C19orf43,ALOX5AP,OST4,LAMTOR5,PYURF,PPDPF,SERF2,RNF19A,C6orf48,ATP5D,SF3B6,PTMA,GNG2,PPP2R5C,SNRPD2,UBA52,CDC42SE2,UBE2B,TOMM20,SH2D1A,PFDN5,CRTAP,VDAC2,MARCKSL1,EIF1AX,ATP5J,IFI27L2,C12orf57,CIRBP,TMA7,MBNL1,RSL24D1,NUCKS1,PTP4A1,REL,SMDT1,STMN1,PCNP,RHOH,TMEM2,LINC-PINT,LINC00493,RARRES3,ARF6,ARID5B,ISG20,EMD,H2AFZ,PEBP1,CMPK1,COX7A2L,UXT,C14orf2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,"CD8, gamma delta t cells_PMID_31980621",T cell,XCL1,IL7R,KLRD1,XCL2,GZMH,ZFP36L2,SLC7A5,FAM177A1,DUSP2,ANXA1,KLRB1,PARP8,GZMB,FYN,RGCC,TUBA4A,GNG2,AIM1,MYADM,BTG1,STAT4,PIK3R1,SPOCK2,ALOX5AP,AC092580.4,CXCR4,SRSF2,RNF125,TGFB1,EZR,ISG20,CCL4,GZMM,IFITM1,LDHA,CD69,GABARAPL1,SATB1,TC2N,RORA,IFNGR1,LEPROTL1,SYTL3,DDIT4,TSC22D3,HNRNPUL1,REL,HLA-C,SARAF,LMNA,FKBP5,TAGLN2,ADGRE5,CXCR6,EML4,SLC2A3,MCL1,PTPRC,AOAH,CD7,CD52,ARHGDIB,CALM1,ZFP36,RALGAPA1,CCNH,SYAP1,P2RY8,CTSW,CD96,PDCD4,HCST,SOCS1,CNOT6L,CAMK4,S100A4,PTGER4,MATK,CRIP1,MTRNR2L12,VPS37B,PBX4,IL21R,GLIPR1,STK17A,IL32,S100A10,FLNA,AKNA,AHNAK,CDC42SE2,SELPLG,USP36,KMT2E,DDX24,YPEL5,FAM102A,LCP1,GPR65,SMCHD1,AKAP13,PLP2,SRSF7,HSPA5,SLA,CRTAM,SH2D2A,YWHAZ,FAM129A,HERPUD2,PDE4B,SFPQ,SRGN,MYH9,RARA,ST3GAL1,S1PR4,HLA-B,HSPA1A,BZW1,IKZF1,PRF1,PTPN22,MT2A,IFITM2,EMB,RNF149,LRRFIP1,MTRNR2L8,TMEM2,GPBP1,CXCR3,GPR171,GSPT1,HSPA8,G3BP2,PPP2R5C,GYG1,AREG,PPP1R16B,FNBP1,RBMS1,CD55,SKIL,EMD,SLBP,MBP,PLEKHA2,ARF6,PTP4A1,RUNX3,PNRC1,CREM,TNFAIP3,VIM,JMJD6,DUSP1,FAM46C,HSPD1,PCBP1,ARID5A,LYAR,CD3E,ATP1B3,HSPE1,ETS1,PFKFB3,ID2,PPP1CB,PITPNC1,TRBC1,RHOH,IDS,OASL,PLK3,CSNK1D,SEMA4D,PBXIP1,IL2RG,ELOVL5,YIPF5,GUK1,PGK1,SH2D1A,PER1,HOPX,NDUFS5,FOSL2,HIST1H4C,CD5,SLC38A1,CAST,GZMA,CDK17,CEBPZ,PPP2CA,CD6,RNF138,S100A6,TNFRSF1B
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,"CD8, T Effector Memory_PMID_31980621",T cell,HSPA1A,HSPA6,HSPA1B,DNAJB1,HSPH1,HSP90AA1,ANXA1,HSPE1,HSPD1,HSPA8,CACYBP,MTRNR2L12,HSP90AB1,ZFP36L2,MTRNR2L8,DNAJA1,BAG3,IL7R,RGCC,TXNIP,DUSP1,XCL2,ZFAND2A,TUBA4A,DUSP2,CD69,UBC,GZMH,TSC22D3,FKBP4,TC2N,GZMM,CXCR4,PARP8,AIM1,SLC7A5,MT2A,MYADM,HLA-C,EZR,KLF2,SPOCK2,FYN,STK17A,CRTAM,CCR7,TCP1,IFITM1,AHNAK,TAGAP,CHORDC1,SELPLG,AC090498.1,SARAF,ISG20,AHSA1,CALM1,BTG1,PLP2,PPP1R2,P2RY8,SH2D1A,CD52,SLBP,CCNH,PTPRC,RNF125,FAM177A1,LDHA,HIST1H4C,OASL,SRSF2,CYTIP,DOK2,SAMD3,STAT4,SMCHD1,PLK3,CDC42EP3,CAMK4,ARHGDIB,HSPA5,CXCR3,TGFB1,JMJD6,TSPYL2,FAM102A,CNN2,CD48,JUN,COTL1,PTPRCAP,CRIP1,ARHGEF1,KLRG1,CITED2,ALOX5AP,SRSF7,SUN2,LCP1,CD6,PCBP1,ZFP36,GZMK,MBP,ZC3HAV1,LYAR,DNAJB6,CD5,GNG2,TMEM2,SOCS1,HCST,SLC2A3,CD3E,RASAL3,UBB,TAGLN2,LEPROTL1,ITK,GIMAP7,S1PR4,NR4A1,DDIT4,KLF3,HLA-B,HSPB1,BIN2,EML4,PIK3R1,CSRNP1,IL21R,FKBP5,PTGER4,LIME1,ADGRE5,GABARAPL1,KIAA1551,TUBA1A,GZMA,MCL1,SEMA4D,SRRT,PTGES3,PDCL3,HNRNPUL1,S100A10,STIP1,CCND3,RALGAPA1,EMB,RAC2,AKNA,CD96,STOM,ACAP1,MYH9,JUNB,PPP2R5C,RBM39,TTC39C,ODC1,MSN,PBXIP1,SLC9A3R1,IKZF1,TNFAIP8,IFRD1,TES,ETS1,IL2RG,CTSW,RHOF,IL32,MAT2A,KLRB1,PIK3IP1,HERPUD2,FLNA,H2AFX,NOP58,SC5D,FXYD5,PRKCH,SAP18,C12orf75,PDCD4,DDX24,AOAH,CCL4,DDX5,RHOH,RORA,SKAP1,CD37,FCMR,PDE4B,MAPRE2,CCT4,SYNE2
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,"CD8, T Resident Memory_PMID_31980621",T cell,CXCL13,XCL2,XCL1,CRTAM,KLRD1,TNFRSF9,TMEM2,DUSP2,CTLA4,LYST,PTPN22,CNOT6L,CD7,COTL1,RNF19A,TIGIT,ITM2A,HOPX,SLA,CBLB,HCST,CD8B,DUSP4,RGCC,NR3C1,FYN,TRAT1,ISG20,RAB27A,SH2D1A,PDCD1,CTSW,SLC7A5,ALOX5AP,CLEC2D,ICOS,CREM,TOX,CCL4,SNX9,LEPROTL1,PTPRC,PRKCH,CD8A,ARAP2,FAM177A1,CCL5,PDE7A,HNRNPLL,PPP1R2,CD27,CD96,GZMA,TRBC2,TNFRSF1B,FAM3C,VPS37B,PTMS,CD3D,HMGB2,ITGA4,NUCB2,ZEB2,VCAM1,ASXL2,CLEC2B,CD3E,RGS2,TSPYL2,ZFP36L2,ADGRE5,BTG1,LAG3,FABP5,SOD1,HSPE1,WHSC1L1,SYTL3,ETS1,LINC00152,PCED1B,STK4,IL32,WIPF1,TRBC1,C9orf16,GABARAPL1,SRRT,SLA2,BCL11B,HAVCR2,SARAF,CCSER2,RHBDD2,UBE2B,IFI16,ELF1,LIMD2,NKG7,PPP2R5C,CYTIP,MAPRE2,EMD,TUBA4A,ITK,STAT3,PMAIP1,NFATC2,ARID4B,PNISR,CYCS,C12orf57,IKZF3,SH3KBP1,EVL,YPEL5,CHIC2,SH2D2A,JMJD6,SRSF7,RARRES3,SIRPG,RELB,CD99,CDKN1B,CD52,PIK3R1,TOMM5,LBH,STK17A,IL2RG,RBM39,GSPT1,SEMA4D,STK17B,SRGN,KIAA1551,GNG2,HLA-C,SRSF2,TMA7,PTP4A1,NAP1L4,PARK7,PIK3IP1,NR4A2,CNIH1,HSPH1,RHOH,RALGAPA1,COMMD6,MBNL1,EZR,TERF2IP,SEPT7,ITGB1,ODC1,NAA50,RAC2,AKAP13,TBRG1,GPBP1,PCBP1,ARF6,CRIP1,STARD7,PNRC1,CST7,LSP1,SH3BGRL3,FKBP5,CACYBP,TSTD1,GBP2,CELF2,PPM1G,HSPD1,FCMR,PPP1R16B,SIT1,CCND2,RSRP1,CHD1,LINC-PINT,BTG3,EPC1,HBP1,SLC38A1,ATP1B3,FAU,CD3G,DHX36,PARP8,SNRPD2,ZBTB1,RNF125,ENTPD1,ARGLU1,RUNX3,TANK
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,Cytotoxic CD8_PMID_31980621,T cell,TRBV15,NKG7,TRAV19,CCL5,CST7,CD8A,GZMK,VCAM1,CD27,CMC1,CD8B,LAG3,DUSP4,CD3D,PRF1,GZMA,TNFRSF9,CD2,TRAC,LYST,CTSW,RGS1,DENND2D,SNAP47,CD3G,APOBEC3G,CD3E,CD7,IRF1,HAVCR2,ZNF331,NR4A2,HLA-A,CHST12,LBH,TOX,ITM2A,LCK,ITGA4,SIT1,GATA3,SIRPG,LIMD2,PTPN6,RNF19A,TRBC2,APOBEC3C,PTPN7,SH2D2A,APMAP,ENTPD1,CREM,PDCD1,PRKCH,PSMB9,IL2RG,EVL,TERF2IP,CD82,PRDM1,STAT3,SLA,RUNX3,TNFRSF1B,CBLB,HNRNPLL,PSTPIP1,LITAF,SRRT,SPN,MALAT1,CORO1A,PARK7,SLC38A1,HLA-E,TAP1,HLA-B,RAB27A,SYTL3,MIR155HG,LAT,CDK2AP2,SPTAN1,RGS2,CLEC2D,TUBA4A,RARRES3,SYNGR2,CCND2,TIGIT,CXCR4,ARHGAP9,CD247,SRSF5,PSMB8,SEPT7,ANXA6,HLA-F,DDX5,AKNA,STK17B,ARID4B,EIF5,SRSF7,MTRNR2L8,RAC2,SEPT1,TRAT1,BRD2,SLC9A3R1,MYH9,LY6E,IL32,FKBP1A,LSP1,ARL6IP5,PKM,DRAP1,TSPYL2,DDX6,GPR65,SH3KBP1,CALR,TNFAIP3,CALM3,CNBP,PGAM1,MAP3K8,PRRC2C,HNRNPF,VCP,BAX,ACAP1,SERTAD1,BCLAF1,RAB1B,PDIA3,ID2,CCNI,KMT2E,SYNE2,NCOR1,BST2,NCL,ISCU,BUB3,ADGRE5,EID1,ICAM3,BHLHE40,PPP1CA,CCDC85B,DDIT4,THRAP3,LCP2,TAPBP,PSMB10,WIPF1,HNRNPK,SF3B2,SRI,SUB1,MSN,WAS,SOD1,UCP2,UBC,HNRNPA1,C9orf142,FUS,FYB,EPC1,PTPRC,CD99,GABARAPL2,UBE2L6,CIRBP,HSPA5,RBM8A,EWSR1,PRPF38B,CIB1,PHLDA1,H3F3B,IDH2,ZFP36L1,GPSM3,SUMO2,IDS,CDKN1B,PNISR,CLIC1,TMBIM6,ATP6V0E1,PDIA6,G3BP2,ATRX,PSME1,SEPT9,CLEC2B
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,Dendritic Cells_PMID_31980621,Dendritic cell,CST3,AREG,HLA-DPB1,HLA-DQB1,HLA-DQA1,HLA-DRB5,LGALS2,LYZ,HLA-DRA,HLA-DRB1,TIMP1,G0S2,HLA-DPA1,CD74,CD1C,IDO1,CLEC10A,C15orf48,FCER1A,INSIG1,HLA-DQA2,CPVL,C1orf162,SNX3,S100A10,TXN,PPA1,COTL1,SAMHD1,BID,GSN,GPR183,CXCL16,SPI1,IRF8,CTSH,PLAUR,LSP1,GPAT3,C1orf54,CFP,CD1E,LST1,MNDA,THBD,PTPRE,HLA-DMA,PPT1,GSTP1,TMSB10,PPIF,PKIB,MARCKSL1,HLA-DQB2,ALDH2,CDKN1A,PLD4,MXD1,IL1R2,PLSCR1,NR4A3,HLA-DMB,CSF2RA,NAPSA,CD83,SPINT2,SGK1,SERPINB1,ITGAX,RAB7B,FAM26F,JAML,CHMP1B,RAB31,BASP1,TUBA1A,H2AFY,ATF5,NET1,CLEC9A,WDFY4,PLEK,WARS,CD86,SERPINA1,CMTM6,SMCO4,GPX1,CPNE3,PAK1,FCGR2B,MT2A,CCDC88A,CD55,RNF144B,TYMP,SAT1,FGL2,GPR157,CIITA,H3F3A,ZNF385A,NLRP3,TAGLN2,RILPL2,GDI2,NAAA,GRN,HDAC9,VDR,GNA15,SHTN1,B3GNT5,ARPC1B,CYP2S1,LY86,FGR,ASAP1,RNH1,SLC2A3,ATP2B1,VIM,KLF4,PHACTR1,TUBA1B,TPM4,IFI30,CEBPD,FBP1,FCER1G,RAB20,SERPINB9,MYD88,MAP3K8,SYNGR2,ACTG1,C20orf27,TNFSF13B,RGS10,RAB11FIP1,ID2,HSPB1,ZYX,BCL2A1,DAPP1,HCK,PLXDC2,NAP1L1,HMGA1,FPR1,PLAC8,VMO1,HBEGF,CLEC7A,CKLF,EIF3L,LYN,TMSB4X,LAP3,NDRG2,MPEG1,FLT3,THEMIS2,PRCP,CD72,S100A6,CLEC4A,PABPC1,NR4A1,ATG3,NME2,GABARAP,FAM49B,PGLS,TPM3,FAM49A,REL,CKS2,RNASE6,NAMPT,ARPC2,MAT2A,RIPK2,ETV6,PYCARD,CD40,LDLRAD4,MAN2B1,OXSR1,ACTN1,HLA-DOA,PHLDA2,ANPEP,ETV3,GNG5,SULF2,ATP1B3,DBNL,LCP1,SLC31A2
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,M1 Macrophages_PMID_31980621,Macrophage,FTL,S100A1,NUPR1,APOC1,MLANA,RNASE1,LGALS3,CSTB,GPX1,IFI27,LGALS1,TYRP1,FTH1,TYROBP,IFITM3,AIF1,APOE,SDCBP,ATOX1,PMEL,ANXA2,AP1S2,S100A11,CD59,MIF,CD68,CHCHD10,NPC2,CTSD,TUBA1B,ANXA5,CD63,UQCRB,ZFAS1,GSTP1,YBX1,ATP6V1F,EIF3E,SEPP1,ASAH1,FCER1G,PRDX1,COX6C,MGST3,UQCRH,GLUL,AP2S1,GPX4,VIM,ALDOA,GABARAP,NDUFA4,SERF2,CST3,PPIA,ATP5G2,USMG5,HLA-DPB1,NPM1,GNB2L1,TOMM7,GYPC,SLC25A6,COX7B,ST13,VAMP8,TPT1,CTSB,POLR2L,C1QA,HSPB1,PABPC1,POMP,ATP5E,C1QB,SEPW1,HIGD2A,BTF3,COX5A,NACA,C14orf2,NDUFB2,PRDX5,HLA-DRA,CD44,PFDN5,HLA-DPA1,DBI,EIF3K,EIF3L,SLC25A3,UQCR11,ATP5D,RBM3,ATP5B,ENO1,C1QC,EIF4B,ATP6V0C,LDHA,AC090498.1,ACTG1,TMSB10,ARPC3,TCEB2,PKM,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,M2 Macrophages_PMID_31980621,Macrophage,C1QC,C1QB,C1QA,SEPP1,CCL3,CXCL8,SLC40A1,CST3,CTSB,IL1B,CXCL2,RNASE1,CCL3L3,HLA-DRA,CXCL3,LGMN,IER3,MS4A7,TYROBP,CD68,FCGRT,CD14,APOE,PSAP,HLA-DPA1,FCER1G,HLA-DRB5,HLA-DRB1,LYZ,CD74,AIF1,MS4A6A,APOC1,FOLR2,HLA-DQA1,GRN,LIPA,STAB1,PLAUR,FTL,DAB2,NPC2,HLA-DPB1,HLA-DQB1,CTSD,CCL4L2,FGL2,SOD2,GPX1,CD83,CTSL,GLUL,SGK1,MS4A4A,BCL2A1,F13A1,TNF,HLA-DMA,SAT1,TMEM176B,ICAM1,FUCA1,CSF1R,PLD3,FOSB,IGSF6,FCGR3A,PLTP,FCGR2A,SPI1,EGR1,CFD,CTSS,CREG1,RNASE6,RNF130,CYBB,MAFB,A2M,CPVL,NFKBIA,GPNMB,LGALS3,TGFBI,MARCKS,CTSZ,HLA-DMB,GADD45B,PTGS2,CCL4,C5AR1,MPEG1,HMOX1,CD163,TNFAIP2,VSIG4,GPR34,TMEM176A,ADAP2,NCF4,LILRB5,FOS,ASAH1,CXCL16,SERPING1,LST1,BLVRB,MSR1,IGF1,GPR183,ITM2B,MRC1,NEAT1,NAMPT,MFSD1,NINJ1,RNASET2,ATF3,GATM,FAM26F,NCF1,S100A11,SLCO2B1,KCTD12,PLEK,NFKBIZ,IFNGR2,RAB31,PPP1R15A,FTH1,RB1,ABCA1,CTSH,RGS10,IL18,KLF4,CD63,PYCARD,CAPG,VAMP8,LY96,HCK,CTSC,TNFSF13B,RAB20,NAIP,LILRB4,LAP3,HNMT,ACP5,CLEC7A,NRP1,NPL,CD4,GSN,APLP2,NR4A1,TYMP,ATP6V1F,PRDX1,RAC1,C1orf162,IFITM3,IER2,AKR1B1,AKR1A1,YWHAH,GM2A,CSTB,LY86,CECR1,KDM6B,RHOB,TPP1,CEBPD,AP2S1,NCOA4,LGALS1,LYN,IFI27,LAIR1,RASGEF1B,LGALS9,ARRB2,MGAT1,RBM47,RASSF4,NAGK,TSPAN4,AP1B1,GRINA,CHMP1B,SAMHD1,CTSA,ANXA5,TBXAS1,IRF8,SNX6,CD81,TUBA1B
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,Mitotic CD8 T Cells_PMID_31980621,T cell,STMN1,HIST1H4C,HMGB2,TYMS,RRM2,MKI67,HMGN2,TUBA1B,UBE2C,CENPF,TOP2A,HMGB1,CCNA2,NUSAP1,H2AFZ,ASPM,DUT,TPX2,CKS1B,PCNA,PTTG1,H2AFV,TMPO,CDK1,SMC4,HIST1H1E,DEK,ZWINT,ASF1B,TK1,FABP5,CENPM,ANP32B,UHRF1,H2AFX,PFN1,KIFC1,HIST1H1B,MCM7,RANBP1,BIRC5,SMC2,RAD21,CALM3,CDKN3,CKS2,MAD2L1,ANP32E,KIF22,CORO1A,TMEM106C,CDC20,PKMYT1,DHFR,RAN,DNAJC9,SNRNP25,ATAD2,CLSPN,SIVA1,RPA3,AURKB,C12orf75,ACTG1,KIAA0101,HIST1H1D,CASC5,CXCL13,EZH2,SMC3,USP1,UBE2T,HNRNPA2B1,CENPE,PSMB9,CFL1,CARHSP1,HMGB3,RACGAP1,NUDT1,NUF2,CENPW,TPI1,CENPU,PKM,MCM3,COTL1,SMC1A,HN1,FEN1,MCM5,RRM1,IDH2,HMGN1,CCNB2,RAC2,ITM2A,NUCKS1,CCNB1,SNRPB,KIF20B,PPP1CA,DTYMK,PGAM1,CDCA5,SAE1,LSM4,DLGAP5,KIF23,CKAP2L,PPIA,DDX39A,CENPN,CDCA8,LMNB1,CDK2AP2,BUB3,RALY,PHF19,GINS2,FANCI,VCAM1,COX8A,LIG1,HNRNPR,KIF11,TCF19,HNRNPF,KPNA2,SSRP1,HP1BP3,DNMT1,RAD51AP1,ARPC2,CDC25B,SNRPD1,LSM5,CBX3,TACC3,KIF2C,BANF1,CLIC1,HNRNPA3,SET,NCAPH,PARK7,LSP1,ARPC5L,HELLS,FBXO5,TROAP,SLC25A5,GGH,SLBP,DUSP4,PTMA,PSMB8,MAD2L2,HIST1H1C,NDC80,CENPK,PARP1,RNASEH2A,GTSE1,DCTN3,TAP1,NUDT21,GMNN,DEPDC1B,SUMO2,SIT1,H2AFY,PRC1,FAM111A,HIRIP3,MCM4,CDCA4,ANAPC11,KIF15,CDCA2,ARPC5,NASP,NCAPG,HMMR,PSMB2,LCP1,SUB1,WHSC1,NUCB2,CDCA7,SNRPG,PSMC3,CDKN2A,GZMA,KIF14,TUBA1C,LSM2,LBR,STRA13,CENPH
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,Mitotic Macrophages_PMID_31980621,Macrophage,STMN1,TUBA1B,HMGN2,TYMS,TOP2A,UBE2C,CDK1,RRM2,H2AFZ,HIST1H4C,CKS1B,HMGB2,MKI67,NUSAP1,PTTG1,KPNA2,TK1,BIRC5,PLK1,CDC20,AIF1,LGALS1,ASF1B,GPX1,C1QC,HMGB3,HMGB1,TUBA1C,CCNB2,MS4A6A,CAPG,NCF4,PCNA,C1QB,CDKN3,YWHAH,LYZ,IDH2,CKS2,DTYMK,BANF1,CTSB,HN1,SPI1,CCNB1,FCER1G,AP2S1,RHOA,CLTA,ARPC5,TMEM106C,C1QA,DUT,CCNA2,ANAPC11,LSM4,SLC25A5,LMNB1,RNASE6,RANBP1,MAD2L1,AURKB,RB1,S100A11,RAB31,COX5A,RHEB,NPC2,CENPW,TALDO1,DEK,ANXA5,GRN,S100A9,H2AFX,CENPU,H2AFV,NUCKS1,VAMP8,ZWINT,PRC1,CENPM,PPIA,TPM4,ADAP2,ANP32B,SMC2,RAN,VPS29,ENO1,ARPC3,NCF1,CYBB,FAM96A,YBX1,CST3,TYROBP,GLUL,TPX2,SNRNP25,DDX39A,SIVA1,LAP3,GSN,CD14,CFL1,GGH,PFN1,SKA2,CALM2,RAC1,COX8A,CD68,ATP6V0D1,RBX1,PKM,DAB2,TPI1,MTCH2,LST1,PGK1,AKR1A1,FAM26F,HLA-DRA,PSAP,RNASEH2C,GNG5,GSTO1,CD74,SMC4,PGAM1,FCGRT,ANP32E,DNAJC8,PRDX1,SAE1,ANXA2,TPM3,CYFIP1,CCL3,HLA-DRB5,C20orf27,STRA13,CAPZA2,PHF19,PRDX3,HCK,UQCR10,UQCC2,PPP1CA,SRP9,HLA-DMA,RAD21,OSTF1,COTL1,BLVRA,GDI2,FABP5,PSME2,CALM3,RNASE1,HLA-DPA1,YWHAE,HSBP1,ATP6V1F,BLVRB,SEC13,PEA15,TXNDC17,ARPC1B,HLA-DRB1,PLIN3,PA2G4,FKBP1A,NME4,KIF5B,AP1B1,SNX10,RGS10,ACTG1,ALDOA,CREG1,PYCARD,PLD3,PTMS,TGFBI,VDAC3,GATM,BLOC1S1,FTL,IGSF6,PDCD5,SLC25A11,KCTD12,LSM5,NUDT1,LDHA,EIF5A,CORO1C,ZNF706
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,Monocyte_PMID_31980621,Monocyte,S100A8,S100A9,G0S2,TIMP1,IL1B,EREG,FCN1,THBS1,PLAUR,CXCL2,SOD2,SERPINA1,LYZ,CCL20,BCL2A1,VCAN,CXCL8,C5AR1,CXCL3,AREG,LST1,NAMPT,C15orf48,OLR1,IER3,NLRP3,S100A6,IL1RN,NFKBIA,FCER1G,STXBP2,FPR1,ACSL1,PTGS2,MAFB,PLEK,CTSS,LINC01272,CD300E,APOBEC3A,S100A4,SLC11A1,AQP9,FGR,CYBB,LILRB2,AIF1,SAT1,CFD,TYROBP,FTH1,CFP,COTL1,C1orf162,CD83,CSTA,CD55,DUSP6,NEAT1,CCL3,S100A11,ATP2B1,MNDA,PSAP,LYN,S100A10,PPIF,HLA-DRA,MT2A,LILRA5,PTPRE,BASP1,LINC00936,HLA-DRB5,KDM6B,FBP1,HLA-DRB1,ITGAX,RNF144B,MARCKS,BID,NFKB1,ETS2,CLEC7A,CST3,LGALS2,RILPL2,MXD1,SPI1,GK,CDKN1A,FGL2,MMP19,PILRA,RAB31,NFKBIZ,EMP3,KYNU,GPR183,APLP2,IFI30,TREM1,WARS,LIMS1,UPP1,IFITM3,LILRB1,ICAM1,HCK,PHACTR1,GPX1,LTA4H,SAMSN1,NCF2,CHMP1B,ZEB2,TSPO,PLSCR1,FAM26F,EHD1,NUMB,PPP1R15A,IRAK3,TLR2,INSIG1,THAP2,TNFSF13B,PLAC8,CCL3L3,THBD,CCRL2,CMTM6,CLEC4E,CXCL16,FCGR3A,CTSH,IFNGR2,GLUL,DMXL2,PLXDC2,TYMP,H3F3A,HIF1A,C10orf54,SLC7A7,SRGN,MIR3945HG,CPVL,REL,DUSP1,TNF,TKT,CD163,NINJ1,GRN,RBKS,FAM49A,CSF3R,IFITM2,TNFAIP2,HBEGF,CD14,CLEC10A,ARL5B,MS4A7,RAB20,STX11,FLNA,HLA-DQB1,SLC25A37,TWISTNB,SERPINB9,TMEM176B,ADGRE2,CD36,GADD45B,LILRA2,ATP13A3,HLA-DQA1,PNRC1,PNP,RIPK2,RNF130,MGAT1,ATP6V1B2,CD93,TET2,SLC43A2,C9orf72,CSF1R,ANXA2,MPEG1,SOCS3,SGK1,PLIN2,FOSL2,SH3BGRL3,GCH1,KLF4,NR4A3
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,Naive T Cells_PMID_31980621,T cell,IL7R,KLRB1,ANXA1,CCR7,CD52,ZFP36L2,LTB,FAM177A1,LEPROTL1,AIM1,RGCC,SLC2A3,SARAF,SPOCK2,MT2A,CD69,BTG1,RORA,NR3C1,SOCS1,PIK3R1,S100A4,EML4,TSC22D3,TXNIP,CXCR4,STAT4,SC5D,FOXP1,IFITM1,FKBP5,TC2N,PARP8,FLT3LG,SMCHD1,FXYD5,ITK,RNF125,CNOT6L,IL32,CD5,PTGER4,GZMM,DUSP2,YPEL5,GLIPR1,CCNH,PPP1CB,STK17A,EZR,CD6,ISG20,CD96,AHNAK,JUNB,DDIT4,RHOH,ALOX5AP,S100A10,EMB,ETS1,SAMSN1,PLP2,LINC-PINT,STK4,TRAT1,CYTIP,CDC42SE2,PIK3IP1,ZFP36,GNG2,PPP2R5C,ARHGDIB,CD55,LMNA,CD28,SEPT6,CD48,TOMM7,ARHGAP15,ANKRD12,NDUFS5,USP36,PDE4B,IFITM2,PDCL3,EVI2A,FAU,PTPRC,PDCD4,OCIAD2,MALAT1,TGFB1,MYADM,TRBC1,TAGLN2,PBXIP1,GIMAP7,SF1,ZC3HAV1,RNF149,FYN,MCL1,CRIP1,BIRC3,IKZF1,CDKN1B,CREM,HNRNPUL1,GLTSCR2,GPR183,COMMD6,UBA52,AES,CD44,ARID5A,ITGB1,TNFAIP8,SMAP2,TMEM123,MBP,S100A6,CALM1,PPP1R2,KIAA1551,TUBA4A,DDX24,PTP4A1,GPBP1,TNFAIP3,TAGAP,SEPT1,IDS,MBNL1,BAZ1A,ELF1,TMA7,FAM46C,AC090498.1,N4BP2L2,CD3E,SYNE2,TRAC,ELOVL5,ACAP1,CORO1B,EMP3,CCND3,KLF6,TRBC2,SYTL3,HNRNPA0,CYTH1,SH3BGRL3,VIM,ABRACL,MYL12A,SELK,SRGN,STK17B,G3BP2,CHD2,AMD1,CD2,FYB,PTMA,EMD,EPC1,CD37,PRMT2,SYAP1,HCST,ARL4C,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,NK Cells_PMID_31980621,NK cell,GNLY,GZMB,KLRD1,GZMH,PRF1,TRDC,AREG,KLRF1,IL2RB,KLRB1,IFITM2,SPON2,CLIC3,GZMM,NKG7,IFITM1,CTSW,CD7,HOPX,CD247,GZMA,MATK,GPR65,MYL12A,PIK3R1,CD69,SLA2,RNF125,BIN2,TGFB1,DDIT4,FLNA,FOSL2,HCST,RAC2,ALOX5AP,CCND3,STAT4,LCP1,SELPLG,SYTL3,AKNA,SLC9A3R1,GNG2,JAK1,VPS37B,CD99,AOAH,ADGRE5,CALM1,CD96,AHNAK,SPN,TSEN54,FYN,SKAP1,ZAP70,CHST12,SLC2A3,AES,ARHGAP9,CORO1A,CST7,IFNGR1,S100A4,CCL4,SH2D2A,MAP3K8,REL,ITGB2,DHRS7,CD52,IL2RG,RAP1B,CDC42SE1,RUNX3,PTGER4,IL32,LDHA,PFN1,BZW1,EVL,RARRES3,APOBEC3G,PTPRC,STOM,GABARAPL1,C9orf142,CD55,MSN,SH3BGRL3,MYL12B,GIMAP7,CD53,ARHGDIB,RASSF5,ARL4C,RHOF,LITAF,LY6E,IER2,FAM46C,SRSF2,ID2,DUSP2,MYH9,MBP,CLEC2B,CLIC1,LSP1,SEPT1,CCL5,BTG1,FAM177A1,WIPF1,PRKCH,CMC1,CXCR4,MACF1,APMAP,EMP3,IRF1,SOCS1,ANXA6,EML4,SHISA5,RALGAPA1,TRBC2,PPP1R18,PTPN7,TAGLN2,TXNIP,TUBA4A,TMEM2,PARP8,DDX6,CYTIP,IKZF1,SLC38A1,STK17A,FAM49B,BHLHE40,PPP1CA,ARF6,KMT2E,ACTN4,ARHGEF1,LCK,NR4A2,ACAP1,ARPC2,DOK2,TAGAP,EIF3G,MAPRE2,CFL1,CD37,CD48,S100A6,B4GALT1,ICAM3,PRMT2,SEPT7,SYNE2,RSRP1,DSTN,LRRFIP1,TRBC1,SERBP1,PDCD4,YWHAZ,ANXA1,NFATC2,RNF213,CD47,LINC-PINT,CCNH,HSPA5,S100A10,NFE2L2,STK4,HNRNPUL1,HLA-C,APBB1IP,DNAJB6,TPM3,SEPT6,PTPN22,SYAP1,SPOCK2,IQGAP1,C9orf78,RBM3,NCOR1,PTP4A1,MBNL1,HLA-B,G3BP2,ETS1,CNN2
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,Plasma Cells_PMID_31980621,B cell,IGLV3-1,IGKV3-20,IGLV2-14,IGLV1-40,IGKV4-1,IGLV1-44,IGLV6-57,JCHAIN,IGKC,IGHG1,IGHG4,IGLC2,IGLC3,IGHG3,MZB1,IGHG2,IGHA1,SSR4,IGLL5,DERL3,FKBP11,XBP1,CD79A,PRDX4,HERPUD1,ANKRD28,SEC11C,ITM2C,HSP90B1,PMEL,RAB30,EDNRB,FKBP2,TXNDC5,PLPP5,TP53INP1,DUSP5,UBE2J1,EHMT1,TFAP2A,VIMP,FNDC3B,SPCS3,JSRP1,ERLEC1,PIM2,POU2AF1,MITF,SYNPR,SSR3,SPCS2,HIST1H1C,SDC1,DNAJB9,PELI1,H1FX,ANKRD37,SDF2L1,HIST1H2BC,TRIB1,SEL1L3,FCRL5,ZBP1,TNFRSF17,SLC44A1,TRAM1,TMED2,KLF13,RRBP1,CHST2,PDK1,TRPM1,SEC61B,TYRP1,PIK3CG,COL11A2,RP11-16E12.2,GNG7,MYDGF,SPCS1,HIST1H2AC,SEL1L,COBLL1,MLANA,TXNDC11,CRELD2,CHPF,SPAG4,CPEB4,ELL2,LMAN1,TMEM59,IFI27,SPATS2,LY9,MANF,ABCB5,AC093818.1,RP11-81H14.2,GLA,BTG2,TXNDC15,RABAC1,PRDM1,MYC,SEC61G,BCL2L11,ARSA,SLAMF7,RHOBTB3,KDELR2,MANEA,TMEM258,AP1S2,GAS6,FBXW7,EIF2AK4,ERN1,EFHD1,ST6GAL1,CLIC4,SERP1,CD38,FAM46C,CAV1,BASP1,ODC1,KRT10,EIF2AK3,ISG20,GSTP1,KDELR1,TYR,CTSF,MIR155HG,JUN,ATF4,RP11-160E2.6,MEF2C,XIST,IFNAR2,CREB3L2,KRTCAP2,ST6GALNAC4,SELM,SRM,MARCKSL1,SNHG7,MAN1A1,NEAT1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell analysis reveals new evolutionary complexity in uveal melanoma,31980621,T Regulatory Cells_PMID_31980621,T cell,FOXP3,TNFRSF4,TNFRSF18,LTB,BATF,IL32,NR3C1,CARD16,CTLA4,TIGIT,GK,S100A4,SPOCK2,GEM,TBC1D4,PMAIP1,CORO1B,SESN3,TNIK,ICOS,CD52,ARID5B,BIRC3,SH2D1A,SOCS1,CNIH1,BTG3,CYTIP,RAB11FIP1,SNX9,RORA,PELI1,PBXIP1,C12orf57,GBP5,RHBDD2,UBE2B,C9orf16,PHLDA1,TRBC2,CTSC,SAMSN1,RHOH,BTG1,NDUFV2,DNPH1,IL2RG,LAT,CD28,SEPT6,PTPN22,PRDX2,IL7R,MAF,FKBP5,STK17B,SKAP1,ISG20,H2AFZ,SOD1,CD2,CDKN1B,PIM2,IFITM1,TSTD1,FCMR,RAC2,PTPRC,FXYD5,LEPROTL1,GBP2,JUNB,EPC1,TSC22D3,USP15,PAK2,COMMD6,ITM2A,STAT3,DUSP4,CD7,TANK,ETS1,ICAM3,UCP2,STK4,CD3E,TRBC1,APBB1IP,SMAP2,KLRB1,CD247,ANKRD12,ITK,WHSC1L1,CNOT6L,G3BP2,MAT2B,N4BP2L2,TRAF3IP3,RGCC,OCIAD2,CREM,GPRIN3,JAK1,TNFRSF1B,PIK3IP1,CASP1,STAT4,SYNE2,PFN1,SH3BGRL3,SRGN,SARAF,CCND2,HINT1,LBH,ATPIF1,PPM1G,CLEC2D,GNG2,EML4,TMA7,ARHGDIB,STAT1,ANAPC16,RNF19A,C19orf43,LCK,GPBP1,PPP1CB,FAU,TAGLN2,MBNL1,REL,RAP1A,BAX,CCND3,ARL6IP5,H2AFV,CDC42SE2,GMFG,RHOF,PNISR,DGUOK,ANP32B,ATP5D,ISG15,CIRBP,FYB,YWHAB,SH2D2A,CD82,MYCBP2,LINC00152,CLK1,SH3KBP1,UBE2D2,SCAND1,SERPINB9,TMEM123,IQGAP1,MTHFD2,CHD2,TRAC,SEPT1,ELF1,COX7C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Cellular architecture of human brain metastases,35063085,CD4_T_PMID_35063085,T cell,SELL,NT5E,ITK,TRMT2B,AAK1,CD4,GPR183,KLHL3,CCR4,ITIH4,DLEC1,ZAP70,PLXDC1,CD40LG,LAX1,TNFRSF4,GPR171,LY9,NCK2,PLCG1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Cellular architecture of human brain metastases,35063085,CD8_T_PMID_35063085,T cell,CD27,CD8B,CLUAP1,CRTAM,FKTN,KLRG1,LY9,PLCG1,RING1,SF1,SIRPG,TSPAN32,ARHGEF1,PPP1R2,CTSW,FBXW4,ZNF611,GZMH,CD8A,TTN,CD7,CX3CR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Cellular architecture of human brain metastases,35063085,Central_memory_PMID_35063085,T cell,CORO7,ATM,GMEB2,SNRPN,ADSL,ITK,TFAP4,NAA16,LY9,CYLD,GIMAP4,PURA,DVL1,RPP38,LRIG2,IL7R,CDKN2AIP,APBB1,IPCEF1,CD247,CD40LG,TRADD,CD3E,TPR,ARID5B,UBASH3A,NCK1,SPTAN1,GPR171,CD5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Cellular architecture of human brain metastases,35063085,Effector_memory_PMID_35063085,T cell,APBA3,CD160,CD2,CD8B,CDK10,CDKN2AIP,CHST12,COG4,CX3CR1,DHX16,EWSR1,GIMAP6,GPR171,GZMK,HMOX2,IKZF3,ITK,KLRD1,KLRG1,MAPKAPK5,MORC2,MRFAP1L1,PLCG1,PSMC5,RNF167,SBF1,SF3B2,SLAMF1,TBCD,USP47,ZFYVE9,ZNF549,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Cellular architecture of human brain metastases,35063085,iTreg_PMID_35063085,T cell,FOXP3,STAT5A,CCR8,CD5,HS3ST3B1,TTN,CTLA4,FASLG,ICOS,CCR3,GALNT8,NFATC3,SIT1,CD28,IL10RA,PPM1B,ATG2B,CCR4,ZFYVE9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Cellular architecture of human brain metastases,35063085,nTreg_PMID_35063085,T cell,FOXP3,STAT5A,DUSP4,CD4,CTLA4,TNFRSF9,IL10RA,IL2RA,CD5,SIT1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Cellular architecture of human brain metastases,35063085,T Cell Activation_PMID_35063085,T cell,CADM1,CD1D,CD2,CD24,CD276,CD28,CD3D,CD3E,CD4,CD47,CD7,CLEC7A,CRTAM,EBI3,ELF4,FOXP3,GLMN,ICOSLG,IL12B,IL18,IL2,IL21,IL27,IL4,IL7,INS,JAG2,LAT,LAX1,LCK,NCK1,NCK2,NHEJ1,NLRC3,PTPRC,SART1,SFTPD,SIRPG,SIT1,SLA2,SOCS5,SPINK5,THY1,ZAP70,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Cellular architecture of human brain metastases,35063085,T Cell Anergy_PMID_35063085,T cell,ACTN4,ADGRE5,ADORA2A,ADORA2B,AGT,ANGPTL2,ANKRD28,ANP32A,ARFIP1,BNIP3,CASP4,CCL1,CCL3,CD40LG,CDC14A,CLEC4E,CSF1,CTSE,DDR1,DTNA,DUSP6,EGR2,ETV6,F2R,FBXO34,FOXP1,FURIN,FYN,GABRA4,GADD45B,GCH1,GGA2,HEBP2,HIF1AN,HLF,HSD17B6,HSPA4L,IER3,ING4,IRF4,ISYNA1,JAK3,JARID2,JUP,KCNJ11,KCNK5,KCNQ5,KIF15,KIFC3,LAG3,LILRB4,LPAR4,LRRC3,MARCHF2,MMD,MPZL2,MYH14,MYL7,MYO1C,MYO1E,NDRG1,NFATC1,NOCT,NOTCH1,NR4A2,NR4A3,OAZ3,PFKP,PLA2G10,RCBTB1,RNF19A,S100A5,SFRP4,SLC29A3,SOCS4,SRGN,STX11,TAGAP,TEKT2,TINAG,TNFRSF19,TNFRSF4,TNFSF11,TNFSF9,TP53RK,ZFP36L1,ZNF629,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Cellular architecture of human brain metastases,35063085,T Cell Exhaustion_PMID_35063085,T cell,ADGRG1,AFAP1L2,CCND2,CD38,CD8A,CD8B,CHST12,CTLA4,DFNB31,EOMES,FUT8,ITM2A,LAG3,MYO1E,NDFIP2,PARK7,PDCD1,SIRPG,SNX9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Treg_PMID_29961579,T cell,NT5E,CD3D,CD3G,CD3E,CD4,CD5,ENTPD1,CTLA4,IZUMO1R,TNFRSF18,IL2RA,ITGAE,LAG3,TGFB1,LRRC32,TNFRSF4,SELL,FOXP3,STAT5A,STAT5B,LGALS1,IL10,IL12A,EBI3,TGFB1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,CD8 T Cell Activation_PMID_29961579,T cell,CD69,CCR7,CD27,BTLA,CD40LG,IL2RA,CD3E,CD47,EOMES,GNLY,GZMA,GZMB,PRF1,IFNG,CD8A,CD8B,CD95L,LAMP1,LAG3,CTLA4,HLA-DRA,TNFRSF4,ICOS,TNFRSF9,TNFRSF18,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Anti-inflammatory_PMID_29961579,T cell,TIGIT,IDO1,LGALS3,PDCD1,FOXP3,ENTPD1,CD274,CSF2,CTLA4,CXCL12,CXCL5,IL8,MIF,PTGS2,VEGFA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Anergy_PMID_29961579,T cell,EGR3,NR4A3,EGR1,NR4A2,EGR2,TNFSF11,IRF4,GCH1,GADD45B,NFATC1,JARID2,SLC29A3,HLF,ZFP36L1,RNF19A,ADORA2B,CCRN41,DUSP6,NDRG1,ADORA2A,HSPA1A,PFKP,FYN,CTSE,ZFP629,F2R,RNF128,LAG3,RGS16,E2F1,E2F2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Pro inflammatory_PMID_29961579,T cell,IL1A,IL1B,TNF,IFNG,TBX21,CCL3,CCL4,PRF1,GZMA,GZMB,GZMK,GZMH,CD8A,FASLG,CCL2,CCL20,IL2,IL6,IL12a,IL17a,IL23a,PTGS2,TLR4,TNF,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Lipid mediators_PMID_29961579,T cell,ADIPOQ,CD137,AgRP,ANGPT1,ANGPT2,ANGPTL3,ANGPTL4,ANGPTL6,BAFF,BMP4,CTSD,CTSS,CCL2,CCL5,RARRES2,CFD,CRP,CXCL8,CD26,ESM1,S100A12,AHSG,FGF1,FGF2,FGF21,FGF23,LGALS3,GCG,GH1,HGF,ICAM1,IGFBP1,IGFBP2,IGFBP3,IGFBP4,IGFBP6,IGFBP7,IL1b,IL6,IL10,IL11,INS,LEP,LIF,NGAL,MCSF,MIF,MPO,GHRL,GHSR,LIPE,LPL,AGT,CEBPA,CFD,FABP4,FASN,IRS2,KLF15,PPARG,PPARGC1A,RETN,SRT3,SLC2A4,SREBF1,ACACB,AXIN1,CCND1,CDK4,CEBPB,CEBPD,DKK1,E2F1,FABP4,FASN,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Glycolysis_PMID_29961579,T cell,ALDOA,ALDOB,ALDOC,BPGM,ENO1,ENO2,GALM,GCK,GPI,HK2,HK3,PFKL,PGAM2,PGK1,PGK2,PGM1,PGM2,PGM3,PKLR,TPI1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,TCA cycle_PMID_29961579,T cell,ACLY,ACO1,ACO2,CS,DLAT,DLD,DLST,FH,IDH1,IDH2,IDH3A,IDH3B,IDH3G,MDH1,MDH1B,MDH2,OGDH,PC,PCK1PCK2,PDHA1,PDHB,SDHA,SDHB,SDHD,SUCLA2,SUCLG1,SUCLG2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Pentose Phosphate Pathway_PMID_29961579,T cell,G6PD,6PD,PGLS,PRPS1,PRPS1L1,PRPS2,RBKS,RPE,RPIA,TALDO1,TKT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Glycogen Metabolism_PMID_29961579,T cell,GBE1,GYS1,GYS2,UGP2,AGL,PGM1,PGM2,PGM3,PYGL,PYGM,GSK3A,GSK3B,PHKA1,PHKB,PHKG1,PHKG2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Glucose Deprivation_PMID_29961579,T cell,NRN1,FAM129A,1L23A,SPRY1,GADD45B,HSPA1A/B,GPNMB,HAVCR2,SOAT2,ADAMTS6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,M1 Macrophage Polarization_PMID_29961579,Macrophage,IL12,IL23,IL12,TNF,IL6,CD86,MHCII,IL1B,MARCO,iNOS,IL12,CD64,CD80,CXCR10,IL23,CXCL9,CXCL10,CXCL11,CD86,IL1A,IL1B,IL6,TNFa,MHCII,CCL5,IRF5,IRF1,CD40,IDO1,KYNU,CCR7,CD45,CD68,CD115,HLA-DR,CD205,CD14,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,M2 Macrophage Polarization_PMID_29961579,Macrophage,ARG1,ARG2,IL10,CD32,CD163,CD23,CD200R1,PD-L2,PDL1,MARCO,CSF1R,CD206,IL1RN,IL1R2,IL4R,CCL4,CCL13,CCL20,CCL17,CCL18,CCL22,CCL24,LYVE1,VEGFA,VEGFB,VEGFC,VEGFD,EGF,CTSA,CTSB,CSTC,CTSD,TGFB1,TGFB2,TGFB3,MMP14,MMP19,MMP9,CLEC7A,WNT7B,FASL,TNFSF12,TNFSF8,CD276,VTCN1,MSR1,FN1,IRF4,CD45,CD68,CD115,HLA-DR,CD205,CD14,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Cytolytics effector pathway_PMID_29961579,T cell,EOMES,TBX21,GZMB,PRF1,FASL,GZMH,GZMA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Type I Interferon response_PMID_29961579,T cell,IRF1,IFIH1,IFITM3,DDX58,IFI44L,IFI6,IFITM2,NAMPT,OASL,RTP4,TREX1,ADAR,FAM46C,LY6E,MCOLN2,APOBEC3G,IL15,ISG15,MX1,TLR3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Type II Interferon Response_PMID_29961579,T cell,IFNG,CXCL9,CXCL10,STAT1,MHC I,MHC II,PD-L1,P21,C-MYC,SMAD7,IRF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,Hypoxia/HIF regulated_PMID_29961579,T cell,AL2,ALDOA,AM,BCL2,BCL2L1,FOS,JUN,SRC,CBP,CCR6,CEBPB,ENOLAS,FAS,FASLG,FKBP52,GLUT1,GLUT3,CSF2,IFNG,IFNB1,IL13,IL1R1,IL2RA,IL4,IL5,IL6R,IL8,IL10R,IL15R,ITGA6,ITK,JUN D,CLB54,MAP3K5,MAP2K1,MAP2K2,MIF,NFATC1,NFKB2,NFKBIE,P53,TGM6,TNF,TNFRSF1B,TRADD,TRAIL,TRAP1,VEGF,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,TCell Terminal Differentiation_PMID_29961579,T cell,TIGIT,PDCD1,CD274,CTLA4,LAG3,HAVCR2,CD244,CD160,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,G1/S_PMID_29961579,T cell,BRCA1,BRCA2,CCNE1,CCNE2,CCNG2,CDC25A,CDC45,CDC6,CDKN1A,CDKN2C,CDKN3,DHFR,E2F1,E2F5,H1F0,H1FNT,H1FOO,H1FX,H2AFB1,H2AFB2,H2AFB3,H2AFJ,H2AFV,H2AFVP1,H2AFX,H2AFY,H2AFY2,H2AFZ,H2AFZP1,H2AFZP2,H2AFZP3,H2AFZP4,H2AFZP5,H2AFZP6,H2BFM,H2BFS,H2BFWT,H2BFXP,H3F3A,H3F3AP1,H3F3AP2,H3F3B,H3F3C,HIST1H1A,HIST1H1B,HIST1H1C,HIST1H1D,HIST1H1E,HIST1H1PS1,HIST1H1PS2,HIST1H1T,HIST1H2AA,HIST1H2AB,HIST1H2AC,HIST1H2AD,HIST1H2AE,HIST1H2AG,HIST1H2AH,HIST1H2AI,HIST1H2AJ,HIST1H2AK,HIST1H2AL,HIST1H2AM,HIST1H2APS1,HIST1H2APS2,HIST1H2APS3,HIST1H2APS4,HIST1H2APS5,HIST1H2BA,HIST1H2BB,HIST1H2BC,HIST1H2BD,HIST1H2BE,HIST1H2BF,HIST1H2BG,HIST1H2BH,HIST1H2BI,HIST1H2BJ,HIST1H2BK,HIST1H2BL,HIST1H2BM,HIST1H2BN,HIST1H2BO,HIST1H2BPS1,HIST1H2BPS2,HIST1H3A,HIST1H3B,HIST1H3C,HIST1H3D,HIST1H3E,HIST1H3F,HIST1H3G,HIST1H3H,HIST1H3I,HIST1H3J,HIST1H3PS1,HIST1H4A,HIST1H4B,HIST1H4C,HIST1H4D,HIST1H4E,HIST1H4F,HIST1H4G,HIST1H4H,HIST1H4I,HIST1H4J,HIST1H4K,HIST1H4L,HIST1H4PS1,HIST2H2AA3,HIST2H2AA4,HIST2H2AB,HIST2H2AC,HIST2H2BA,HIST2H2BB,HIST2H2BC,HIST2H2BD,HIST2H2BE,HIST2H2BF,HIST2H3A,HIST2H3C,HIST2H3D,HIST2H3PS2,HIST2H4A,HIST2H4B,HIST3H2A,HIST3H2BA,HIST3H2BB,HIST3H3,HIST4H4,MCM2,MCM6,MSH2,NASP,NPAT,PCNA,RRM1,RRM2,SLBP,TYMS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment,29961579,G2/M_PMID_29961579,T cell,AURKA,BIRC5,BUB1,BUB1B,CCNA2,CCNB1,CCNB2,CCNF,CDC20,CDC25B,CDC25C,CDK1,CDKN2D,CENPA,CENPF,CKS2,KIF20A,PLK1,RACGAP1,TOP2A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,M1_PMID_28474673,Macrophage,CCR7,IL2RA,IL15RA,IL7R,CXCL11,CCL19,CXCL10,CXCL9,TNF,CCL5,CCL15,IL12B,IL15,TRAIL,IL6,CCL20,PBEF1,ECGF1,BCL2A1,FAS,BIRC3,GADD45G,HSXIAPAF1,SLC7A5,SLC21A15,SLC2A6,SLC31A2,INDO,PLA1A,OASL,CHI3L2,HSD11B1,AK3,SPHK1,PFKFB3,PSME2,PFKP,PSMB9,PSMA2,OAS2,PTX3,CSPG2,APOL3,IGFBP4,APOL1,PDGFA,EDN1,APOL2,INHBA,APOL6,HESX1,IRF1,ATF3,IRF7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,M2_PMID_28474673,Macrophage,GPR86,P2RY5,TGFBR2,HRH1,TLR5,DCL-1,MSR1,CXCR4,DECTIN1,P2RY14,DCSIGN,CLECSF13,MS4A6A,CD36,MS4A4A,MRC1,IGF1,CCL23,CCL18,CCL13,SLC21A9,SLC4A7,SLC38A6,CTSC,HEXB,LIPA,ADK,HNMT,TPST2,CERK,HS3ST2,LTA4H,CA2,ALOX15,HS3ST1,TGFBI,SEPP1,CHN2,FN1,FGL2,GAS7,EGR2,MAF,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,B cell/Anti-apoptosis_PMID_28474673,B cell,BCL2,CASP8,FAIM3,TNFSF10,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,B cell/Naïve / Memory_PMID_28474673,B cell,BMI1,CD24,CD69,CR1,ENTPD1,FCER2,FCGR2B,FCGRT,IGHD,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,B cell/Cytokines_PMID_28474673,B cell,CCL5,CCR1,CCR6,CCR7,CLR1,GPR9,IFNGR1,IL10RB,IL15,IL24,IL2RB,IL2RG,IL4R,IL6,IL8,TGFB1,TGFB3,TGFBR2,TNFRSF1B,TNFSF11,XCL1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,B cell/Pro-apoptosis_PMID_28474673,B cell,BIK,FAS,LGALS1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,B cell/Proliferation_PMID_28474673,B cell,ASK,AURKA,AURKB,AURKC,BUB1B,CCNA2,CCNB1,CCNB2,CCNE2,CCNF,CDC20,CDC25B,CDC45,CDC6,CDK1,CDK5,CDKN2C,CENPA,CENPE,CENPF,CHEK1,CIP2,DEEPEST,E2F5,ECA39,FOXA1,GADD45A,GADD45B,GTSE1,HEC1,KIF11,KIF22,KIF23,MAD2L1,MCM3,MCM4,MCM6,MCM7,MKI67,NCAPD2,NDN,NEK2,PCNA,PLK4,PTTG1,RABGAP1,RAD17,RFC3,RGL2,RPA3,SIL-TAL1,TFDP1,TMPO,TPX2,TTK,UBE2C,WEE1,ZW10,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,B cell/Germinal center_PMID_28474673,B cell,BCL7A,CD27,CD36,CD80,HGF,MME,MYBL1,RGS13,TNFSF8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,T cell/Cytotoxic_PMID_28474673,T cell,CST7,GZMA,GZMB,IFNG,NKG7,PRF1,TNFSF10,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,T cell/Exhausted_PMID_28474673,T cell,BTLA,CTLA4,HAVCR2,LAG3,PDCD1,TIGIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,T cell/Regulatory_PMID_28474673,T cell,IL2RA,IL4R,IL7,TGFB1,TGFB3,TGFBI,TGFBR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,T cell/Naïve_PMID_28474673,T cell,CCR7,LEF1,SELL,TCF7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,T cell/Costimulatory_PMID_28474673,T cell,ICOS,CD226,SLAMF1,TNFRSF14,TNFRSF25,TNFRSF9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,T cell/G1/S_PMID_28474673,T cell,ATAD2,BLM,BRIP1,CASP8AP2,CCNE2,CDC45,CDC6,CDCA7,CHAF1B,CLSPN,DSCC1,DTL,E2F8,EXO1,FEN1,GINS2,GMNN,HELLS,MCM2,MCM4,MCM5,MCM6,MLF1IP,MSH2,NASP,PCNA,POLA1,POLD3,PRIM1,RAD51,RAD51AP1,RFC2,RPA2,RRM1,RRM2,SLBP,TIPIN,TYMS,UBR7,UHRF1,UNG,USP1,WDR76,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-seq enables comprehensive tumour and immune cell profiling in primary breast cancer,28474673,T cell/G2/M_PMID_28474673,T cell,ANLN,ANP32E,AURKA,AURKB,BIRC5,BUB1,CBX5,CCNB2,CDC20,CDC25C,CDCA2,CDCA3,CDCA8,CDK1,CENPA,CENPE,CENPF,CKAP2,CKAP2L,CKAP5,CKS1B,CKS2,CTCF,DLGAP5,ECT2,FAM64A,G2E3,GAS2L3,GTSE1,HJURP,HJURP,HMGB2,HMMR,HN1,KIF11,KIF20B,KIF23,KIF2C,LBR,MKI67,NCAPD2,NDC80,NEK2,NUF2,NUSAP1,PSRC1,RANGAP1,SMC4,TACC3,TMPO,TOP2A,TPX2,TTK,UBE2C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,T cells_CD4_CCR7_PMID_37427448,T cell,CCR7,IL7R,LTB,SELL,FOS,TCF7,AQP3,CD40LG,LEF1,MAL,TMEM123,S1PR1,HBB,GIMAP7,JUN,LDHB,CTSL,FBLN7,GPR183,SOCS3,MCUB,JUNB,FOSB,TNFRSF25,ZFP36L2,TSC22D3,DUSP1,IER2,BTG2,KDSR,ICAM2,TIMP1,TNFSF13B,TNFAIP8,CD4,THEM4,PLAC8,GIMAP4,NCF1,SNHG8,AREG,FXYD7,FCMR,TC2N,IFITM1,KLF2,RCAN3,MYC,ADD3,S100A10,FAAH2,AES,SPOCK2,EGR1,ZFP36,NFKBIA,RASGRP2,KLF3,SOD2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,T cells_CD4_IL17A_PMID_37427448,T cell,CCR6,IL17A,CCL20,TNFRSF25,LTB,CD40LG,IL7R,CAPG,CTSL,SPOCK2,KLRB1,AQP3,CTSH,PBXIP1,CD4,KDSR,S100A4,RORA,RORC,GPR25,TNFSF13B,HBB,FTH1,CTSB,S100A11,DDIT4,IL22,GPR183,S100A10,ELK3,CD5,IL4I1,TMEM173,CCR4,AHR,NMRK1,44445,IL17F,DUSP1,TRBV2,FOS,GPR65,TAGLN2,VIM,ZFP36L1,TRBV7-2,PIM2,ARRDC2,PFKFB3,IL6R,SLAMF1,TIMP1,PERP,TMEM123,MCAM,ANXA2,TRAV26-1,GNA15,TRAV8-4,TNFAIP8,CDKN1A,CACYBP,NFKBIA,LIMS1,MAP3K4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,T cells_CD4_CXCL13_PMID_37427448,T cell,CXCL13,NMB,IGHV1-69D,TNFRSF4,CD4,TMEM173,PDCD1,NR3C1,TNFRSF18,IL21,CD40LG,CD200,TSHZ2,TRBV10-3,TRBV7-2,CTSB,SOX4,BHLHE40-AS1,SPOCK2,CORO1B,DDIT4,NCF4,ZBED2,DUSP4,TNFRSF25,ICOS,MAF,MAL,CSF2,CHN1,SNX9,FTH1,METTL8,TRBV18,CYSLTR1,GK,GALM,G0S2,LIMS1,ALOX5AP,LIMA1,CTSL,CCDC50,TRAV8-4,PHTF2,ITPR1,RBPJ,GADD45G,PDE4D,TRBV28,KIAA0319L,GATA3,PRDM1,CTLA4,NPDC1,ETV7,GNG4,HIF1A,MYO7A,TOX2,PKM,FBLN7,TRAV29DV5,TNFSF8,TMEM123,TIAM1,TMSB10,PHPT1,YWHAQ,NDUFV2,ARID5B,RGS1,TRAT1,AL606807.1,BATF,CPM,TRAV9-2,CDK6,PHLDA2,LAIR2,LINC01871,LINC01943,ADGRG1,ZNF706,TRBV11-2,SH2D2A,ZFP36L1,KLRB1,RGS16,IGFL2,UCP2,HBB,PDE3B,SMCO4,TRAV20,SAMSN1,IL6ST,GBP4,NFKBIA,TRABD2A,HBA2,PSMB3,IGFBP4,TPM4,AC004585.1,TRBV6-1,TNFSF13B,RUNX2,CD28,SLA,TYMP,C4orf48,SH3TC1,RDH10,MTHFD2,PGM2L1,ATP5MC1,TPI1,PLPP1,BHLHE40,TSC22D3,LMO4,ADI1,SOD1,HSPB1,RGS2,EPSTI1,PTTG1,CTSH,IL10,SYNGR2,KIAA1324,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,T cells_Treg_FOXP3_PMID_37427448,T cell,TNFRSF4,FOXP3,LTB,IL2RA,MAGEH1,BATF,TNFRSF18,ICOS,RTKN2,PIM2,MIR4435-2HG,LAIR2,SAT1,CARD16,DNPH1,GLRX,TRBV20-1,LINC01943,CTLA4,DDIT4,CD4,S100A4,CTSC,IL32,SELL,SOCS3,ARID5B,CD27,SLAMF1,IL1R2,UGP2,CORO1B,HPGD,HTATIP2,TYMP,SPOCK2,PBXIP1,TBC1D4,CCR8,STAM,TNFRSF1B,NCF4,SYNGR2,TIGIT,BIRC3,FCMR,ENO1,TMEM173,GK,CD28,PRDM1,LTA,THEM4,NFKBIA,ID3,ADTRP,TSC22D3,GNG8,PRDX2,ATOX1,PKM,RGS1,ADI1,ETV7,ARPC1B,F5,GADD45A,SOX4,LAYN,IL21R,GBP5,AQP3,CD177,FAAH2,FAS,POU2F2,OAS1,CALM3,TMSB10,LMNA,SAMHD1,MAF,CD7,IKZF4,CUL9,TRBV5-1,GBP2,FCRL3,TXN,PMAIP1,CNIH1,OTUD5,TRAV9-2,SATB1,SFT2D1,BEX3,44445,LGMN,PIM3,AC017003,IL18R1,C16orf87,PELI1,PMVK,GALM,IKZF2,NAMPT,TNFRSF9,EPSTI1,PRDX1,HERPUD1,UCP2,GATA3,LEF1,APLP2,SOD1,IL7R,CXCR6,IL6R,CCR4,COX17,FTH1,CD5,CDKN1A,TRAF1,CD320,PHTF2,DUSP4,TBC1D8,SH2D2A,MAP1LC3A,PPA1,NDUFV2,HAPLN3,SNX9,CTSB,RORA,TRAV13-1,SEC11C,LY96,TRBV7-2,RHOH,CD83,CRADD,CCDC167,IL12RB2,ZFP36L1,TRAV8-4,ERH,SMS,LINC00519,TRBV6-6,PARK7,TRBC1,TNFRSF25,TRBV18,CTSA,EBI3,FBLN7,IL1R1,LINC02099,C4orf48,EPHX2,DUSP16,LINC02195,SIRPG,TRBV5-4,TRAV26-1,SDC4,GNA15,SPATS2L,SOCS1,LIMS1,PPP1R15A,TMEM123,TNFAIP3,STAT1,CADM1,ACP5,HSDL2,NINJ1,DUSP1,ZC2HC1A,MYL6,TIFA,ICAM2,GPR183,LY75,BAX,JUNB,TRBV11-2,FANK1,FRMD4B,TRAV8-2,JPT1,CREM,ADD3,PLIN2,AC243960.1,CCL22
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,T cells_Tprol_MKI67_PMID_37427448,T cell,STMN1,HIST1H4C,TUBA1B,TYMS,HMGB2,UBE2C,MKI67,HMGN2,CENPF,NUSAP1,HIST1H1B,TOP2A,ASPM,HIST1H1D,HIST1H1E,CDK1,DUT,H2AFZ,CKS1B,MCM7,CCNA2,BIRC5,SMC4,TPX2,CDC20,CDKN3,CCNB1,HMGB1,H2AFV,HIST1H2AG,CCNB2,HIST1H3B,CDCA8,TMPO,TK1,ZWINT,PLK1,HIST1H1C,FEN1,CKS2,ASF1B,KIF22,MAD2L1,KPNA2,DLGAP5,MCM5,TMEM106C,HIST1H2AL,CENPM,H2AFX,KIFC1,UBE2T,PCNA,AURKB,SMC2,CENPE,CENPU,PTTG1,PKMYT1,DEK,NUDT1,RRM1,KIF23,RPA3,TUBA1C,GTSE1,HMMR,CDT1,RANBP1,ANP32B,NDC80,GINS2,RACGAP1,CLSPN,ATAD2,NUF2,CKAP2L,DHFR,KIF20B,FABP5,SMC1A,CARHSP1,UHRF1,RAN,ANP32E,LMNB1,CENPN,CDCA5,DTYMK,HIST1H3C,CALM3,ANXA5,NCAPG,MCM2,MCM3,NASP,CENPW,HIST1H2AM,RRM2,LIG1,NUCKS1,HJURP,SAE1,LGALS1,SNRPD1,SIVA1,PRC1,EZH2,DDX39A,KIF2C,PCLAF,FBXO5,TROAP,SLC25A5,KNL1,RNASEH2A,HMGB3,COTL1,DNAJC9,TPM4,H2AFY,CDCA3,JPT1,SNRPB,RAD21,CDCA2,CALM2,PRDX3,SNRPG,PKM,HIST1H3G,NCAPH,ARL6IP1,CENPK,GZMB,C12orf75,CENPX,RAD51AP1,DNMT1,CDCA7,SGO2,CDCA4,HLA-DRA,SKA2,RNASEH2C,IDH2,USP1,COX8A,CKAP2,CBX5,RBBP7,C19orf48,HLA-DRB5,CCDC167,GMNN,HNRNPA3,FAM111A,LSM4,BRCA1,CDC45,SLBP,RFC4,PSMC3,HELLS,PHF19,NEIL3,VIM,CDK4,SPC25,ENO1,SMC3,KIF15,PFN1,MT2A,MXD3,HIST2H2AB,TPI1,WDR34,AURKA,CD38,PPIA,PTMA,FANCI,BUB1,BANF1,TCF19,SNRPE,SGO1,ESCO2,TALDO1,HMGA1,GGH,ILF2,KIF14,HADH,PDIA6,MCM4,ATAD5,CFL1,CENPA
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,T cells_Tex_HAVCR2_PMID_37427448,T cell,CXCL13,LINC02446,CCL4,KRT86,HAVCR2,CCL4L2,CCL3,LAG3,CD8A,CCL5,IFNG,HLA-DRA,PHLDA1,VCAM1,GZMB,ACP5,HLA-DRB5,HLA-DRB1,CD8B,PDCD1,HLA-DMA,RGS1,HLA-DPA1,NKG7,CXCR6,ANXA5,TNFSF4,GZMH,TIGIT,HLA-DQB1,HLA-DQA2,SIRPG,DUSP4,LAYN,GALNT2,MIR155HG,HLA-DPB1,HLA-DQA1,CCL3L1,PTMS,SAMSN1,CLEC2B,RBPJ,LRRN3,PRF1,ITM2A,GEM,CD74,CARS,TNFRSF9,CRTAM,PLPP1,NDFIP2,FABP5,CD82,LINC01871,FASLG,RGS2,ADGRG1,FAM3C,SNAP47,ENTPD1,LINC02195,HMOX1,ALOX5AP,CD27,HSPA1A,HSPA1B,APOBEC3G,TNIP3,OASL,TNFSF9,RAB27A,AC243829.4,LINC01480,LYST,GZMA,SIT1,CCND2,GBP5,GPR25,APOBEC3C,MYO7A,IGFLR1,ZNF683,PTPN22,ARL3,PGAM1,LGALS3,COTL1,CSF1,KIR2DL4,NELL2,ID2,TSC22D1,BST2,CD69,ITGB1,TRGV10,MTHFD2,PARK7,IGHG1,FTL,TAGAP,GOLIM4,CTLA4,LINC01943,CD70,TNS3,MT2A,CD200R1,KLRC1,GBP2,SPRY1,GPI,SLA,SGK1,FKBP1A,IGHV3-15,SYNGR2,C12orf75,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,T cells_CD8_GZMK_PMID_37427448,T cell,GZMK,ITM2C,CST7,GZMA,PPP1R14B,COTL1,DKK3,CCL5,GZMH,IGKV3-20,LYAR,CMC1,SH2D1A,TRGV3,KLRG1,AOAH,HLA-DRA,CD74,SAMD3,CD8A,HLA-DPA1,IDH2,HLA-DRB5,HLA-DPB1,GYG1,IGHV5-51,HMGA1,CD8B,NKG7,ZNF683,ISG15,TRBV12-3,OASL,SLA2,EOMES,CXCR3,TRDV2,MT2A,GIMAP4,APOBEC3G,TRBV7-9,TRAT1,TC2N,PIK3R1,IGKV1-9,PLP2,CNN2,SLAMF7,TRAV14DV4,GIMAP7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,T cells_CD8_IL7R_PMID_37427448,T cell,IL7R,PPP1R2C,NEAT1,FOS,XCL1,TNF,JUN,MALAT1,FOSB,KLF6,RALGAPA1,AHNAK,CD55,SCML4,SLC38A2,ZFP36L2,EGR1,NFKB1,TC2N,GPRIN3,GADD45B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,NK cells_NK_FCGR3A_PMID_37427448,NK cell,FGFBP2,FCGR3A,PLEK,GNLY,TYROBP,CTSW,SPON2,PRF1,NKG7,KLRD1,CX3CR1,S1PR5,CD300A,XBP1,CLIC3,GZMB,FCER1G,HOPX,LITAF,C1orf21,PLAC8,PTGER2,ADGRG1,CST7,TRDC,GZMH,LGALS1,KIR3DL1,FCRL6,MATK,TTC38,DSTN,FGR,NCR3,GZMA,SYNGR1,KLRF1,FLNA,KLRG1,PRSS23,TRGV9,AES,ANXA1,TRDV2,LAIR2,EMP3,CMC1,SPN,CISH,EFHD2,ITGB2,KLF2,BIN2,KIR2DL1,ADRB2,SH2D1B,MYO1G,LAT2,XCL2,RASGRP2,PXN,ZEB2,ABI3,LAIR1,PIM1,TXK,UPP1,CEP78,AKR1C3,PTPRE,C12orf75,MYBL1,SAMD3,SH3BP5,TRGV2,IER3,CISD3,IGFBP7,AOAH,ASCL2,GADD45B,APOBEC3G,P4HB,TNF,HSH2D,TGFBR3,C1orf162,IFITM2,TXNIP,GSAP,AHNAK,LINC02384,ICAM2,ARPC5L,CCL4,SORL1,RASA3,IFITM3,TRGV4,TMEM273,PTGDR,KIR2DL3,RAB9A,KLRB1,HSPA5,ITGAM,KLRC3,MAPK1,KLF3,STARD3NL,LINC00861,ARPC5,CDC25B,BHLHE40,MTSS1,UAP1,MCTP2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,NK cells_NK_KLRC1_PMID_37427448,NK cell,GNLY,TYROBP,FCER1G,TRDC,SH2D1B,XCL1,XCL2,KLRC1,CTSW,CLIC3,AREG,KLRB1,KIR2DL4,LAT2,TXK,IFITM3,SLC16A3,KRT81,MATK,IFITM2,KLRD1,HOPX,FCGR3A,NFKBIA,CD300A,KRT86,KLRF1,TMIGD2,GLIPR2,ZFP36,ADGRG3,CD7,FES,FGR,STARD3NL,KLRC3,CEBPD,IER3,XBP1,PRF1,IER2,CXXC5,ZNF683,GSTP1,PLAC8,GADD45B,AOAH,RGS16,FOS,SOX4,BHLHE40,HSH2D,CD69,MAFF,LYN,TIMP1,MAP3K8,KIT,C1orf162,APOBEC3G,SYK,IRF8,GZMB,PIK3R1,SRGAP3,TAGLN2,NKG7,RBM3,CXCR4,GABARAPL1,PTGDR,CLEC2B,KIR3DL1,TNFSF11,HNRNPAB,IL18RAP,TNFRSF18,NR4A1,FLOT1,BIN2,ZBTB16,GSN,IGFBP7,KLRC2,DHRS3,NCAM1,SESN1,RAMP1,TOX2,LDB2,LITAF,IFITM1,HBB,DUSP2,TENT5A,CAPG,ZC3H12A,DSTN,HSPA5,CMC1,RASGEF1B,HMGA1,SKAP2,ITM2C,KLF10,ABLIM1,ICAM1,C1orf21,CHMP1B,LINC00996,SPINK2,LDLRAD4,MYC,CD83,AL157895.1,TPM4,SLA2,CSRNP1,CD55,KIR2DL1,SPON2,SPRY1,CATSPER1,NFKBIZ,ARRDC2,ATP8B4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,B cells_B0_TNFRSF13B_PMID_37427448,B cell,HLA-DQA1,HLA-DRA,HLA-DPA1,MS4A1,DUSP2,LTB,CD82,HLA-DRB1,IER5,HLA-DPB1,HLA-DQB1,COTL1,HLA-DRB5,ITGB1,CD52,CD74,TNF,BANK1,TNFRSF13B,DNAJA1,TNFSF9,NR4A2,CAPG,HSP90AB1,AHNAK,SYNGR2,EGR1,S100A4,ZFAS1,CD69,CD83,HLA-A,H3F3B,JUNB,FOSB,PTPN6,RAC2,MYL12A,LMNA,CCDC50,CD53,CORO1A,REL,KLF6,ACTG1,CRIP1,BCL2A1,NR4A1,IER2,SH3BGRL3,HSPH1,TPM3,ARL6IP5,DUSP4,IFITM2,S100A10,SRSF7,CD48,PFN1,PPP1R15A,CTSH,TMSB4X,PTPRC,RILPL2,HLA-E,CD99,HSPE1,FUS,ACP5,GPSM3,HSPA8,SP110,DDX5,DNAJB1,COMMD6,ZFP36L1,HLA-B,WSB1,PTPRCAP,KLF2,PABPC1,SMIM14,GPR183,CHORDC1,GSTK1,CALM2,AIM2,ZFP36,CKS2,SERTAD1,IRF8,CD37,EEF2,UBC,CFL1,KIAA1551,SCIMP,RNASET2,LCP1,CLIC1,YWHAZ,DUSP1,CD24,MYL12B,PSMB9,RSRP1,ARHGDIB,ATP2B1,LITAF,TAGLN2,CMTM6,NR4A3,44445,FCRLA,HLA-DMA,RGS19,TXNIP,ARPC3,FLNA,UBA52,NPM1,IDS,PEA15,SAMSN1,FAU,CIB1,UBB,UBE2N,LSP1,UVRAG,PIKFYVE,DDX3X,CAPZB,BTF3,JAK1,STAT1,ADGRE5,GNAI2,CDC42EP3,TOMM7,MARCKS,RACK1,ACTR3,HNRNPA2B1,TCP1,CDKN1A,RIPOR2,MYH9,LIMD2,HSPD1,EZR,LAPTM5,PFDN5,ARPC2,TMSB10,VASP,TRIM22,SFPQ,EML4,CD44,PTGES3,ID3,BLK,TAP1,ATP6V0E1,DNAJB6,EIF4A2,PARP14,RGS2,TAF7,SRSF5,SNHG12,CNPY3,LAT2,SLC2A3,ZNF331,CAP1,ZC3HAV1,MSN,PARP15,ANXA6,FTH1,BTG1,PLEK,LY86,POU2F2,SNX3,CXCR4,PRR13,PTMA,TNFAIP8,CSK,RHOG,S100A11,CTSZ,HCLS1,PTPN1,NEK6,S100A6,HLA-DMB
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,B cells_B1_S1PR1_PMID_37427448,B cell,YBX3,TCL1A,BACH2,MYADM,CD72,FOXP1,SNX9,IL4R,TUBA1A,FCER2,S1PR1,CLEC2B,TMEM123,CD55,BTG1,SNX2,ARRDC2,SARAF,RCSD1,CHMP1B,LSM7,CXCR4,LINC00926,LAPTM5,WDR74,TGIF1,RHOH,FCMR,SLC2A3,ITM2B,FCRL1,TAGAP,STAG3,GRASP,CCR7,CD37,LYN,GBP4,SELL,RGS16,JUND,RBM38,AFF3,CLEC2D,PNRC1,SSH2,TSPAN13,CD79A,PMAIP1,CD69,AES,HIF1A,BIRC3,YPEL5,VPS37B,PLEKHA2,STK17A,CHPT1,CREM,NCF1,UCP2,PIK3IP1,ARL4A,ZFP36L2,CD83,ZNF107,SMAP2,SMCHD1,RUBCNL,CYTIP,STX5,LY9,SF1,ALG13,FTH1,ZNF331,STMN1,SOD2,FXYD5,TAF1D,HVCN1,ELF1,RASGRP2,MARCKSL1,SP140L,PFKL,KLF2,ARID5A,PHACTR1,IFT57,SP100,NOP53,AC007384.1,PDE4B,HNRNPK,SEC62,AP1B1,TMF1,CD79B,IL16,STX7,RASGEF1B,C7orf50,UBE2B,GCC2,ZCCHC7,WASHC4,EIF2AK3,PTP4A1,OSER1,EIF1B,DCK,SNHG7,NFKBID,BPTF,TMEM243,UBALD2,ANKRD44,PAIP2,TXNIP,IRF1,FKBP4,TUBA1B,ADK,LAPTM4A,RERE,HNRNPA0,SELENOF,TRA2B,FOS,ADAM28,SDCBP,LAMTOR5,ETS1,TTC3,AC016837,ATF7IP,AREG,ISG20,MTSS1,LNPEP,HLA-DQA2,RB1,LBH,CCND3,TRIM22,JUNB,USP15,UTRN,TRBC2,CDC42SE1,PTMA,SLC38A1,UBB,CDKN1B,STK4,NFKBIZ,MAPRE2,CIRBP,EZR,TSC22D3,DDX6,SNHG15,ZFP36L1,LIMD2,NR3C1,SNX10,H3F3A,RAB30,PPM1K,HBP1,MAT2A,PLAC8,CD22,CSRNP1,PPP1R2,BNIP3L,CACYBP,DDX5,TBC1D1,TGFBR2,NSD3,AFF4,BTG2,SLC44A2,PFDN5,HLA-DMA,CD19,YWHAZ,SETX,MKNK2,HNRNPA1,BTK,RALGPS2,OSBPL8,CALM1,RACK1,TNFRSF14,LRRFIP1,GTF2B
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,B cells_B2_MKI67_PMID_37427448,B cell,HIST1H4C,STMN1,HMGB2,TYMS,HMGN2,MKI67,PPIB,HSP90B1,HMGB1,HIST1H1B,TUBA1B,HIST1H1E,UBE2C,DUT,SDF2L1,H2AFV,NUSAP1,MYDGF,GSTP1,ATP5MC3,SMC4,MZB1,HIST1H1C,MYBL2,CCND2,TK1,SUB1,SEC61B,FKBP11,TXN,P4HB,PSME2,XBP1,TOP2A,RANBP1,SEC11C,SEC61G,H2AFZ,PPIA,LDHA,UQCRQ,MIF,ENO1,ASPM,CKS1B,MCM7,PTTG1,PFN1,CENPF,SSR3,ATP5PF,CDK1,CHCHD2,IDH2,COX8A,CALM3,HIST1H2AH,GNG5,CDC20,DHFR,PKM,COX6B1,TXNDC5,H2AFY,PDIA4,TPX2,ZWINT,AURKB,ANAPC11,PCNA,PRDX3,PGAM1,KDELR2,PSMB2,PDIA6,MANF,HMGA1,TMEM258,COX5A,SPCS3,ACTG1,CDKN3,LDHB,CENPM,KPNA2,ATP5MF,KIF22,NDUFB3,ERH,COX6A1,FABP5,CFL1,OSTC,PHF19,CCNB2,PKMYT1,LMNB1,PSMB3,FEN1,PRDX2,SRM,ATP5MC1,RRM2,LRRC59,CRELD2,HIST1H3B,ITM2C,CENPW,CENPU,CCNB1,SNRPD1,TPI1,LMAN1,C12orf75,LSM3,JPT1,HIST1H2AL,PLK1,BIRC5,NAA38,COPE,HSPA5,DNMT1,UBE2J1,ARPC5,SMC1A,MAD2L1,ELOB,ALYREF,PRELID1,SHCBP1,ATP5F1C,CD38,MTDH,LSM5,RPN2,NUCKS1,MCM3,HNRNPA3,HIST1H3C,CANX,NDUFV2,DAD1,BUB1,NDUFAB1,GINS2,UBE2T,HM13,KIFC1,LMAN2,KNL1,COX7A2,COX6C,NDUFA6,SNRPG,SMC2,ABRACL,TXNDC17,SNRPB,ATP5IF1,ASF1B,PSMA5,ANP32B,HIST1H1D,LIG1,HIST1H2BJ,RAN,ANP32E,ORC6,AQP3,GGH,PA2G4,NDUFS6,NDUFB6,SNRPD3,SLC25A5,NDUFS5,PRDX6,RPA3,ATP5MPL,CYC1,HIST1H2BC,FDPS,TIMM8B,FKBP1A,RNASEH2A,CDCA8,C1QBP,SERF2,DDOST,SEC13,DDX39A,ANXA5,NDUFA4,MLEC,ROMO1,NDUFC1,NDUFA12,SPCS2,CDT1
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,B cells_B3_NEIL1_PMID_37427448,B cell,TCL1A,PRPSAP2,MARCKSL1,SMIM14,MAP1LC3B,ACTG1,TMEM123,IGLV3-19,FAM3C,PRDX6,YWHAQ,LCP1,GCHFR,PPP2CA,NEIL1,TCEA1,SERF2,DBI,SEC14L1,LRMP,FABP5,LINC02576,SOD2,STAG3,ACY3,LGMN,HMGN1,GMDS,ATP5MG,HLA-DQA2,YWHAB,STMN1,VPREB3,EZR,GABARAPL2,RFTN1,VNN2,PLIN2,H2AFZ,GDI2,DNAJB6,HLA-DRB5,ST6GAL1,RGS13,BCL2A1,IGHV5-78,UCP2,CPNE3,SLC25A5,SUGCT,HMGB2,CD79B,ACTR3,GPR18,RASL11A,LBR,TOX,SYNE2,CLIC4,ISG20,OAZ1,HMGN2,CD72,HLA-DMA,RAB11FIP1,ARPC3,CREM,RHOH,RANBP2,SKP1,RAB30,ABRACL,UBE2J1,POMP,CD55,TKT,G3BP2,PFN1,CD53,AMD1,GYPC,JPT1,LIMD2,MYL6,SLC25A3,CFL1,OGG1,LAPTM5,USP12,ELL3,PAIP2,LPP,ELF1,ODC1,DYNLL1,TPD52,ARHGDIB,CHMP1B,GLUL,AC023590.1,CNIH1,SWAP70,CD40,VCPKMT,GTF2B,DEF8,RAP1B,CALM2,ITGAE,CORO1A,BRK1,FGD6,ALOX5AP,HERPUD1,HLA-DMB,HSPA8,RPRD1B,WIPF1,IGHV5-10-1,RBBP4,RAB8B,CD74,MOB1A,YWHAH,ATP5PB,MYADM,ATP5MC3,CD22,GLIPR1,TMEM156,HNRNPC,MS4A1,SGK1,CUX1,H3F3A,GNG2,OSER1,MTHFD2,SERPINA9,SMIM20,BASP1,BACH2,FKBP1A,FAM49A,LAMTOR5,RBBP8,PABPC1,BIK,BCL6,ATP5MF,WTAP,RAN,GSTP1,RABGEF1,MGMT,DTX1,ALDOA,MAPRE2,RFC1,ARPC1B,PCBP2,ARPC2,SAP18,NSMCE1,PTPRCAP,PARP1,SLBP,KLHL6,RAP1A,MYL12A,HSBP1,HMCES,PTTG1,NCK1,SYAP1,ARL6IP1,H2AFV,PMAIP1,MYO1E,SUMO1,SF3B6,LAT2,SLAIN2,POLD4,CCNI,BCL11A,BRWD1,COX6A1,WDR1,NDUFA13,SSBP2,PPP1CC,NAA50,SYPL1,PTP4A1,LYPLA1,SIT1,CYB561A3,GNG5,RBM4
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,B cells_PC_IGHA1_PMID_37427448,B cell,IGHV3-21,IGKV4-1,IGKV3-15,IGKV1-5,IGHV3-7,IGHV3-23,IGKV3-11,JCHAIN,IGKV3-20,IGHA1,IGLV3-1,SSR4,IGKC,DERL3,MZB1,IGLV6-57,XBP1,FKBP11,PRDX4,IGLL5,SEC11C,IGHG2,IGHG1,ITM2C,FKBP2,HSP90B1,SSR3,PPIB,NUCB2,SDF2L1,IGLC2,JSRP1,SELENOS,IGHG4,MYDGF,SPCS3,TXNDC5,GSTP1,HM13,IGHG3,DNAAF1,SEC61B,TMEM258,ERLEC1,SPAG4,LMAN1,AC012236.1,SPCS2,TMEM59,SDC1,SPCS1,TNFRSF17,KDELR1,PLPP5,KDELR2,CYTOR,RPN2,KRTCAP2,TXNDC15,CD38,HERPUD1,SELENOM,RABAC1,MANF,OSTC,IGLC3,CRELD2,P4HB,PDIA4,MEI1,LINC02362,SEC61G,GAS6,NPC2,ERN1,ARSA,SEL1L,CHPF,GLRX,H1FX,ALG5,LMAN2,PECAM1,FAM92B,RRBP1,CD63,SIL1,TMED10,PHPT1,DNAJC1,HDLBP,TRAM1,SRPRB,TMEM208,ERGIC3,PRDM1,PTP4A3,PDIA6,HSPA5,CREB3L2,LIME1,CHID1,DNAJB9,TECR,TMED9,FNDC3B,AQP3,TPST2,TXNDC11,UQCRQ,LTC4S,DAD1,DSTN,DNAJC3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,B cells_PC_IGHG4_PMID_37427448,B cell,IGLC3,IGHG3,IGHG4,IGLC2,IGHG1,IGHG2,IGKC,NEAT1,IGLV3-1,RRBP1,IGLL5,ANKRD28,SLC7A5,JSRP1,MZB1,XBP1,CD38,AC007954,XIST,CYTOR,TRIB1,FKBP2,FNDC3B,DNAAF1,JUN,HSP90B1,IGKV3-11,H1FX,HDLBP,JCHAIN,MALAT1,CPEB4,SSR4,PRDM1,SLC38A2,FKBP11,TXNDC11,SLC5A3,EDEM1,ERN1,ACADVL,ELL2,HIST1H2AC,TXNDC5,SEC61A1,CREB3L2,MAN1A1,EHMT1,BTG2,ZBP1,CCDC88A,SDF2L1,ANKRD36B,CEP128,SELENOS,GAB1,MBTPS1,TNFAIP3,ITM2C,LMAN1,DNAJC1,TYMP,SDC1,SLC17A9,DERL3,HIST1H1C,PIK3CG,SLAMF7,EIF2AK4,ERLEC1,LAX1,TCF25,GAS6,SYNE2,HM13,MBNL2,RAB30,TENT5C,FCRL5,HSPA1B,OGT,SIL1,UBALD2,GOLGA3,IL10RA,FBXW7,PRDX4,SEL1L,CITED2,SEC24A,PIM1,HMCES,MIR4435-2HG,USP48,SEC14L1,P2RX1,ITPR2,SPATS2,GLCCI1,PDXK,GADD45A,PDK1,GOLGB1,CHPF,FAM214A,CCDC88C,LINC02362,P4HB,SPAG4,CLPTM1L,FNDC3A,TOP1,TP53INP1,AKAP9,CCND2,AC007384.1,SRM,RGS1,GALNT2,MTDH,SEL1L3,NUCB2,LIME1,MYDGF,SSR3,KLF13,ARSA,AC012236.1,HIPK2,SLC39A7,SEC24D,SNRNP70,AQP3,DNAJC3,ARFGAP3,SPCS3,GOLGA4,PECAM1,PPP1R10,LRPAP1,SCYL1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,Myeloid cells_Macro_MKI67_PMID_37427448,Macrophage,HIST1H4C,STMN1,UBE2C,TUBA1B,HMGN2,TYMS,CDK1,HMGB2,H2AFZ,CKS1B,CDC20,CENPF,NUSAP1,MKI67,PTTG1,CCNB1,HMGB1,TK1,TOP2A,KPNA2,H2AFV,TUBA1C,CDKN3,PLK1,TPX2,CKS2,SMC4,CCNB2,BIRC5,H2AFX,ASPM,DUT,SPP1,HIST1H1B,MCM7,CENPM,CCNA2,HMMR,HIST1H1E,ZWINT,DTYMK,NUCKS1,PCNA,JPT1,HMGB3,CKAP2,HIST1H1D,DEK,CENPW,AURKB,RAN,TMPO,TMEM106C,RPA3,SMC2,CDCA8,LSM4,IDH2,MAD2L1,OLFML3,SLC25A5,CENPU,DLGAP5,NUF2,GGH,KIF22,ASF1B,SKA2,GTSE1,RANBP1,KIFC1,ATAD2,LSM5,MZT2A,SNRPD1,S100B,ARL6IP1,ANP32B,CENPX,FEN1,RACGAP1,NCAPG,TROAP,PCLAF,DDX39A,BUB3,CDCA3,CALM2,CENPE,PRC1,PKMYT1,CENPK,CLSPN,SIVA1,NDC80,UQCC2,RAD51AP1,DNMT1,RHEB,SGO2,NASP,PHF19,PTMA,SNRPG,MIF,MZT1,MZT2B,YWHAH,KIF20A,UQCRQ,TREM2,HMGN1,ANAPC11,CARHSP1,ANP32E,FAM111A,RRM2,KIF23,MCM5,DHFR,NUDT1,GMNN,ANLN,UBE2T,CEP55,LDHA,DNAJC9,CENPN,UBE2S,UHRF1,NME4,BAG3,HINT1,TPI1,NCAPH,PPIA,CDK2AP2,C1QC,RRM1,COX8A,PGAM1,KNL1,BANF1,NCAPD2,KIF2C,ORC6,ILF2,TACC3,SNRPB,TIMM10,PA2G4,CKAP5,MND1,LGALS1,HIST1H1C,CKAP2L,TECR,RNASEH2A,SMC1A,CDK4,CHCHD2,PIMREG,RAD21,PSMC3,APOC1,KIF20B,SNRNP25,GINS2,NUCB2,ENO1,BUB1,WDR34,FADS1,CALM3,DCTN3,CENPA,SNRPF,HELLS,ERH,PRDX3,BOLA3,ZDHHC12,SHCBP1,KIF11,HADH,VDAC3,CAPG,TMEM97,SNRPE,FAM111B,HNRNPAB,CCL2,CDCA2,ESCO2,HIST1H3B,C1QB,SNRPD3,TUBG1,LDHB,SPAG5
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,Myeloid cells_Macro_C1QC_PMID_37427448,Macrophage,APOE,RNASE1,APOC1,C1QA,SELENOP,C1QB,C1QC,CCL18,GPNMB,LGMN,CTSD,NUPR1,IFI27,PLTP,PLD3,SPP1,CTSL,TREM2,CTSB,FTL,FOLR2,CTSC,CD68,MS4A4A,STAB1,MSR1,HMOX1,DAB2,SERPING1,A2M,SLC40A1,PSAP,CXCL9,NR1H3,CTSZ,CD163,FCGRT,CREG1,SDS,LIPA,MMP9,MS4A7,ACP5,C3,FCGR3A,SLCO2B1,CCL2,FUCA1,OLFML3,MS4A6A,CD81,TSPAN4,FABP5,NPC2,TMEM176B,PLA2G7,F13A1,LILRB4,LGALS3BP,CTSA,CCL3,GRN,MAFB,PLAU,VSIG4,GPR34,NRP2,LAMP1,FCGR2A,MFSD1,CD14,TMEM176A,KCNMA1,MRC1,C2,MTRNR2L12,ATOX1,NPL,SLC1A3,CSTB,SCPEP1,ASAH1,HLA-DMB,MERTK,SCARB2,MMP14,FCGR1A,GM2A,ADAMDEC1,SDC3,LHFPL2,DNASE2,CCL4L2,TCN2,ARL4C,TIMP2,BLVRB,ACP2,MARCKS,ADAP2,HLA-DMA,FN1,CD74,GAA,HEXB,C1orf54,ITM2B,CSF1R,FMNL2,PRDX1,GCHFR,FCGR2B,CPM,BCAP31,GLMP,CYBB,CCL4,TTYH3,MMP19,RASSF4,LAIR1,TGFBI,TYROBP,RNASET2,ABHD12,SCD,TNFSF13,SLAMF8,HEXA,AKR1A1,ABCA1,CD4,RHOB,GAL3ST4,AKR1B1,AP1B1,HLA-DRB1,GLUL,VMO1,MGST3,PLXDC2,C3AR1,CCL3L1,LRP1,LPAR6,ATP6AP2,SGK1,NRP1,FCER1G,LY96,PMP22,BNIP3,FCHO2,LAMP2,CD63,HLA-DQA1,CYFIP1,IDH1,CTSS,ATP6V1F,COMT,OLFML2B,RNF130,IL4I1,CTSH,DRAM1,ADM,EPHX1,MT1X,ANXA2,TFRC,MPP1,RAB20,SNX6,HNMT,ATP6V0C,CAPG,SMPDL3A,HLA-DPA1,HLA-DRB5,HLA-DOA,TPP1,ME2,UNC93B1,PILRA,LAPTM5,SLC7A7,VAMP8,TNS3,HLA-DRA,CYBA,CD72,IL18,COLGALT1,HLA-DQB1,SNHG12,ATP6AP1,IL18BP,AP2A2,C5AR1
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,Myeloid cells_Mono_FCN1_PMID_37427448,Monocyte,S100A8,S100A9,S100A12,FCN1,VCAN,G0S2,APOBEC3A,IL1B,TIMP1,EREG,BCL2A1,SOD2,SLC25A37,IFITM2,MCEMP1,CXCL8,CXCL2,FPR1,NAMPT,SMIM25,CD55,CD300E,GCA,PPIF,TREM1,SLC11A1,IL1RN,PLEK,CDA,LILRA5,CXCL3,LST1,SOCS3,IL1R2,RBKS,SERPINA1,LILRB2,NLRP3,AQP9,CSF3R,PLAUR,LYZ,IER3,ACSL1,ATP2B1-AS1,PTPRE,HBEGF,FTH1,CFP,STXBP2,OSM,H3F3A,CSTA,MXD1,AC015913,S100A6,MNDA,C5AR1,NCF2,NCF1,TNFRSF1B,C15orf48,CFD,SAT1,UPP1,FPR2,IFITM3,GK,CLEC4E,HCK,RIPOR2,ANPEP,IVNS1ABP,CARD16,NFKBIA,EHD1,THBD,S100A4,CEBPB,ETS2,DUSP1,TKT,PRELID1,FGR,GMFG,KDM6B,LILRB1,FLNA,RILPL2,HCAR3,LILRA2,AIF1,HRH2,MX2,PHACTR1,PDE4B,MSRB1,TSPO,PNRC1,C19orf38,IRF7,GPCPD1,PNP,CTSS,WARS,S100A10,NEAT1,LILRB3,MARCO,ISG15,ACTN1,CDC42EP2,SLC2A3,CD36,CHD1,YBX3,TRIB1,LITAF,OLR1,CD14,NINJ1,SERPINB1,VEGFA,CD44,PFKFB3,GPSM3,VASP,COTL1,RGS2,RNF149,ASGR1,GBP1,UBE2D1,MIR4435-2HG,TNFAIP2,APLP2,SLC43A2,ATP2B1,AGTRAP,RAB24,PILRA,SNAI1,TYMP,STX11,S100A11,CLEC4A,ALDOA,EMP3,CD93,MYD88,MIR22HG,ATP1B3,GABARAP,AREG,SRGN,FAM45A,CD48,HK3,GSTO1,MAP1LC3B,JUNB,MPEG1,IRF1,PGD,MYO1G,ITGAX,LCP1,ADM,LAMTOR4,TALDO1,VSIR,SERPINB9,CLEC12A,SERP1,TMEM167A,EIF1,GCH1,CASP1,MCL1,ABHD5,MYO1F,BCL3,FYB1,CORO1A,ARRB2,SAMSN1,CHMP1B,IGSF6,SPI1,NUP214,IFI30,METTL9,BRI3,PLSCR1,KYNU,PLBD1,BST1,RIPK2,SMCHD1,FCER1G
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,Myeloid cells_Mast_CPA3_PMID_37427448,Mast cell,TPSAB1,TPSB2,CPA3,HPGD,CLU,HDC,TPSD1,CTSG,KIT,GATA2,VWA5A,SLC18A2,HPGDS,LTC4S,MS4A2,NSMCE1,CD69,IL1RL1,CMA1,RHEX,UTS2,RAC2,PRG2,PTGS1,PLAT,CNRIP1,AL157895.1,LAT,BACE2,CD82,RGS13,MAOB,CD52,ACSL4,LAPTM4A,LEO1,CD9,ANXA1,SOCS1,MT2A,SMIM1,CSF1,ARHGEF6,AHR,RHOH,SMYD3,CALB2,BTK,ALOX5,ITM2A,ALOX5AP,AKAP12,AREG,BIRC3,UBB,GALC,RAB27B,NTRK1,LDHB,PLPP1,GRAP2,SIGLEC6,SLC45A3,ITGA2B,MALAT1,ARMH1,FOXP1,MLPH,TNFRSF9,PTGS2,SVOPL,LMO4,NFKBIZ,ACOT7,RHBDD2,TNFAIP3,BTG2,NDFIP2,DLC1,SELENOK,ITM2C,PRDX6,ELL2,TESPA1,SLC26A2,TSC22D1,HS3ST1,ADRB2,SSR4,SKAP1,44441,SLC24A3,ATP6V0A2,BATF,STXBP6,DTNBP1,CDC42EP3,GCSAML,TSC22D3,RHOBTB3,TNIK,ABRACL,TENT5A,C12orf57,TNFSF10,DNAJA1,GMPR,LMNA,ENPP3,TSPYL2,LAX1,FXYD5,CTNNBL1,TSEN54,IDS,FER,GPR65,TNFRSF18,CTTNBP2,CNIH1,ELOVL5,CLCN3,HSP90AB1,HLTF,KLRG1,TNFRSF4,SYTL3,ST3GAL4,MCTP2,FDX1,SMIM3,HSPE1,EPAS1,CATSPER1,DNAJB4,HSPA5,ABCC4,SAMSN1,ANKRD28,P2RX1,DDIT4,AC020916.1,BHLHE40,MAST4,FHL1,CD37,AKAP13,HSD17B12,DUSP10,IL9R,NR4A1,MITF,PPDPF,HSPA8,BEX4,AHNAK,ELF1,ALDH1A1,SYTL2,MIIP,ZC3H12A,RAB37,CUTA,ZBTB20,NCOA4,CHORDC1,TPST2,SQSTM1,PRKX,VAT1,SNHG8,CIRBP,SNHG7,RGS16,RAB32,HSPD1,HSPH1,STX3,GNPTAB,NBAS,CHST12,AQP3,C21orf91,GTF2B,SARAF,RASA2,TSTD1,TTLL7,PTPN7,UBA7,44258,SPCS1,NUTM2A-AS1,FOSB,PEBP1,RASGRP4,VIM,PAG1,TMEM154,TWISTNB
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,Myeloid cells_DC_CD1C_PMID_37427448,Dendritic cell,S100B,CD1C,CD1A,CD1E,FCER1A,LTB,CLEC10A,HLA-DPB1,HLA-DQA1,HLA-DQB1,HLA-DRA,GSN,HLA-DPA1,HLA-DRB5,HLA-DQA2,PKIB,HLA-DRB1,NDRG2,CD74,INSIG1,PPA1,CST3,YWHAH,GPR183,PLAC8,SERPINF1,HERPUD1,HLA-DMA,JAML,ALDH2,LMNA,IL1R2,RNASE6,PEA15,PLD4,DBI,PLEK2,CKLF,IFNGR1,FCGR2B,GDI2,ABI3,NAPSA,NR4A3,CSF1R,C12orf45,SLC38A1,COTL1,LGALS2,AXL,CNN2,C15orf48,SGK1,PAK1,CA2,C1orf162,CPVL,HLA-DMB,EIF3L,RGS1,CTSH,TUBA1B,UBE2E2,IL18,GEM,MTRNR2L12,SYNGR2,CRIP1,CST7,GLO1,SLC25A5,GLIPR1,CD83,GPAT3,BIN1,TMEM14C,SAMHD1,LSP1,KLF4,SERPINB9,CXCR4,CD86,ZNF385A,HINT1,NME2,RGS10,BTF3,SUSD3,RHOC,CXorf21,HCLS1,MS4A6A,MEF2A,PALD1,CIITA,RUNX3,CYP2S1,H2AFY,HNRNPA1,ACTG1,CSF2RA,ENTPD1,44445,SPI1,ENG,SMCO4,TIGAR,APEX1,RGCC,RBM3,FBP1,RALA,MEF2C,TMEM109,CALHM6,SPINT2,PPIA,CIB1,KCNMB1,CEBPD,ADAM19,S100A10,CXCL16,MYL12A,PTGER4,EIF5A,CLDND1,OSTC,ALOX5AP,MCOLN2,LDHA,OTULINL,LY86,PSME2,DENND1B,SLC8A1,PRCP,HLA-DOA,UCP2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,Myeloid cells_Macro_TRAC_PMID_37427448,Macrophage,CCL5,GZMB,CXCL13,NKG7,CD7,CD3E,IL32,GNLY,CD3D,GZMA,CD8A,CD2,IFNG,GZMH,PTPRCAP,TRBC2,SPOCK2,LCK,ETS1,IFITM1,EVL,CTLA4,CD3G,PRF1,KLRB1,STK17A,FYN,HIST1H1E,CD8B,TRBC1,LAG3,TUBA4A,LBH,SH2D2A,CD96,SYNE2,CXCR6,CD247,PRDM1,ISG20,44440,ITM2A,CLEC2D,CST7,BATF,TRAC,PTPN22,RORA,CD6,SOD1,CXCR4,TNFRSF4,PTPRC,TIGIT,DNAJB1,IKZF3,OASL,UBE2S,JUND,ARID5B,DUSP2,CBLB,PHLDA1,DUSP4,KIAA1551,APOBEC3G,TBC1D10C,IL1RN,SIRPG,SIT1,GZMM,ZAP70,H1FX,IL7R,CXCR3,KMT2A,ITGAE,BTG1,CD27,ZFP36L2,PRKCH,IL2RB,CORO1A,AC016837,CACYBP,CYTIP,ACTN4,HSPA8,GNG2,C12orf75,TAGAP,LTB,GSPT1,SLC38A1,ENTPD1,DUSP5,PIM2,HSPH1,HMGB2,WIPF1,RUNX3,TTC39C,AES,ACAP1,ANKRD12,HMGB1,ID3,ZC3HAV1,SYTL3,AKNA,RHOH,CCL4,CNOT6L,SLC9A3R1,SP140,GPRIN3,CDKN1B,ARHGAP9,OCIAD2,RASAL3,DDX5,HIST1H4C,HSP90AA1,SARAF,GBP5,BUB3,STMN1,RBL2,ARHGEF1,TNFAIP3,EPC1,HSPA1B,RNF213,DIAPH1,RARRES3,CYTOR,ARPC5L,RNF19A,HLA-A,EML4,HSPD1,PPP2R5C,TSC22D3,PRDX2,ATP2B4,UBALD2,SRSF7,YPEL5,EMB,FYB1,NAP1L4,SPTAN1,BRD2,MBNL1,CREM,TFRC,IDH2,RAN,ADAR,NPM1,N4BP1,DDX3X,RAB27A,ADGRE5,MYH9,ARL4C,TMPO,EZR,HSPE1,CCNH,CLEC2B,C12orf57,APBB1IP,HNRNPL,PSIP1,RAD21,44448,RGCC,CCND2,44445,IKZF1,LEPROTL1,ODC1,DENND2D,JAK1,STK17B,SP100,AAK1,TERF2IP,CSK,HDAC1,GALM,KDM2A,YWHAQ,DOK2,RBBP4,ZBTB38,IFI16,SLFN5,PDCL3
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,Myeloid cells_DC_LAMP3_PMID_37427448,Dendritic cell,FSCN1,CCR7,LAMP3,CCL19,TFPI2,BIRC3,CCL22,TXN,MARCKSL1,CCL17,CST7,KIF2A,IDO1,IL7R,LAD1,RAMP1,EBI3,DUSP5,LSP1,PPA1,GRSF1,GPR157,NUB1,RAB9A,GSTP1,AOC1,DAPP1,RASSF4,SYNGR2,TBC1D4,CSF2RA,PNRC1,MALT1,CD83,MGLL,ANXA6,NCCRP1,PLA2G16,KDM2B,TRAF1,HMGN3,IL32,NET1,UBD,FNBP1,RELB,CD200,BASP1,CLIC2,CEP350,CRIP1,CDKN1A,PTPN1,TBC1D8,GABARAPL2,TMEM176A,FLT3,RFTN1,GPX4,TSPAN13,ZFAS1,CHD3,NRP2,MARCKS,GADD45A,SINHCAF,HINT1,CFLAR,IRF4,VOPP1,UVRAG,POGLUT1,HSPB1,ERICH1,ALDH2,MALAT1,FAM118A,TVP23A,GCSAM,ID2,LY75,JAK1,REL,RAB8B,TRIP10,CERS6,ISCU,H2AFY2,STK4,NDE1,BTG1,ANKRD33B,TNFAIP2,NABP1,GLS,GPR183,ACTG1,DUSP4,VMO1,MYO1G,MIR155HG,IL15,TMSB10,ANKRD10,GRAMD1A,ZBTB10,FYTTD1,MMD,ARHGAP10,ARAP2,RAB11FIP1,PALLD,MAP3K14,NMRK1,RHOF,ACHE,H2AFZ,SLCO5A1,SIAH2,TRADD,CLPTM1,GSN,LIMCH1,FAM49A,CD70,NFKB1,ETV3,BET1,PABPC1,NAV1,TNFRSF9,TRAFD1,NUAK2,RAB30,TTYH2,SEMA7A,HMSD,ITGA4,NAP1L1,HOPX,GRASP,VDAC2,ANXA3,CRLF2,CD274,PTGES2,PPM1K,PSIP1,TNNT2,CD40,GRHPR,STARD7,ANXA7,ZEB1,SOCS1,MCM5,ZDHHC18,IL13RA1,CYTH1,TUBA1C,BCL2L14,CYTIP,AUTS2,CD86,HIVEP1,MAP3K13,HAPLN3,MAP4,PFN1,CD80,CMTM6,CYB5A,APPL1,SNN,LYST,TNFRSF11A,BCL3,SLC22A23,MTHFD2,YWHAQ,BZW1,ZFAND5,TMSB4X,NFKB2,NECTIN2,NOP53,PPP1R14A,USP12,CFP,PDCL3,NECAP2,REPIN1,ASMTL,RUBCN,H6PD,FLOT2,ARL6IP5,DSG2,ST8SIA4,MINK1
Single‐cell dissection of cervical cancer reveals key subsets of the tumor immune microenvironment,37427448,Myeloid cells_DC_CLEC9A_PMID_37427448,Dendritic cell,CPVL,IRF8,DNASE1L3,S100B,NAPSA,CPNE3,TACSTD2,CLEC9A,SNX3,C1orf54,TXN,HLA-DPA1,RGCC,SERPINF1,IDO1,HLA-DPB1,LGALS2,WDFY4,CST3,LSP1,RNASE6,NET1,CCND1,PPT1,PPA1,CD74,HLA-DQA2,CST7,C20orf27,FSCN1,HLA-DQB1,HLA-DRB1,NAAA,HLA-DRB5,RAB7B,EGLN3,VMO1,HLA-DOB,SERPINB1,HLA-DRA,SHTN1,TMSB4X,CADM1,XCR1,HLA-DQA1,GSTP1,ACTG1,DUSP4,PPP1R14A,RGS10,EIF3L,ENSA,C12orf45,UCP2,CLNK,BATF3,CD40,SERPINF2,TAP1,UNC119,GSN,ASAP1,PABPC1,LIMD2,BID,CSRP1,CNN2,ALDH2,DAPP1,RAMP1,SELPLG,ICAM3,CALCRL,WARS,VAC14,CYB5R3,LDLRAD4,SERPINB9,S100A10,COTL1,SLC25A6,C1orf162,FLT3,BIN1,RHOF,FGL2,MARCKSL1,PPM1M,SYNGR2,TSPAN13,SNX22,TAGLN2,HINT1,NME2,CLIC2,NAP1L1,SLAMF7,P2RY6,MCOLN2,SMCO4,TMEM14A,GYPC,RAB29,RNH1,IL16,ARF5,PPM1J,TMEM243,GDI2,PRCP,AGPAT1,TCEA3,MCM5,BTLA,CAMK2D,TWF2,ANXA6,CD83,C1QBP,ATG3,44445,PLCD1,NDRG2,MPEG1,CXCL16,DGAT2,PTRHD1,COX7C,IFT20,EVL,TPMT,PSTPIP1,EIF3H,ZNF366,BUD23,RACK1,MZT2A,CYYR1,CNPPD1,DNAJC4,CLIC3,TLR10,EIF3F,PSMB9,FNBP1,RUBCNL,HPS5,FOXN2,BTF3,CRIP1,HLA-DMA,HIST1H2BK,TMSB10,GABARAPL2,SINHCAF,GNAO1,TOR3A,CKLF,NACA,KIF2A,SPINT2,COX5A,CXCR3,SLC25A5,ID2,C1orf21,CAT,ATP5F1A,PCBP2,SUB1,APH1A,NDUFS4,MAP4K1,MTDH,LTB,SLAMF8,PTMS,TRABD,PARVG,GPR137B,TRIM22,RAB32,DSTN,NME4,MCUR1,ELOVL5,ZNF296,NCOA7,TNF,TOMM34,GINM1,CDK2AP2,CIITA,AHNAK,SEMA7A,TMEM50B,TPM3,PTPRE,RBM3,FLOT2
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c4_CD8+_ZFP36_PMID_34493872,T cell,ZNF683,XCL1,RP11-291B21.2,LDLRAD4,XCL2,CD8A,HSPA1B,HSPA1A,CD69,HOPX,CCL5,CD8B,NR4A1,ZFP36,DNAJB1,TUBA4A,CCL4,ATF3,RGCC,FOSB,CTSW,FOS,MYADM,GADD45B,CLEC2B,KLRD1,DUSP1,CD7,ANKRD37,ANXA1,GNLY,NEU1,PTPN22,GABARAPL1,IFNG,JUN,BTG2,SLC7A5,NR4A2,PARP8,CITED2,NR4A3,MCL1,DNAJA1,HSPH1,CTSA,YPEL5,CSRNP1,CTD-3252C9.4,DUSP2,RALGAPA1,SRSF2,S100A10,HCST,ID2,TUBA1A,GPR65,RGS2,PPP1R15A,PPP2R5C,FAM177A1,STK17A,CD63,S100A6,CD99,CD55,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c6_IFIT1_PMID_34493872,T cell,ISG15,IFIT3,IFI6,MX1,IFIT2,IFIT1,RSAD2,ISG20,OAS1,LY6E,IFITM1,OASL,MX2,IFI44L,EIF2AK2,STAT1,IRF7,TNFSF10,GBP1,HERC5,CMPK2,SAMD9L,PLSCR1,IFI35,EPSTI1,XAF1,TRIM22,RNF213,MT2A,OAS3,USP18,UBE2L6,NT5C3A,IFI44,SAMD9,TAP1,BST2,C19orf66,DRAP1,PARP14,SP100,PPM1K,GBP4,PSMB9,PARP9,C5orf56,LAP3,RBCK1,GZMK,IFI16,CHST12,GIMAP4,LAG3,ADAR,GBP5,SAT1,GIMAP7,RARRES3,SLFN5,APOL6,SHISA5,XRN1,PSMB8,SMCHD1,TYMP,EVL,PHF11,TMEM123,PSMB10,MYL12A,NAPA,CD48,IDH2,CHMP5,IFITM3,HLA-E,IFITM2,CD74,CASP1,GZMA,LIMD2,CD8A,CCL5,DYNLT1,CD8B,SP140,CD164,TAPBP,COX5A,KPNB1,RAC2,COTL1,APOBEC3G,DENND2D,ALOX5AP,SNX6,CD47,ODF2L,IRF1,VAMP5,GBP2,CCDC85B,PSME1,PSME2,AES,WIPF1,CNN2,CORO1A,CCDC109B,GPSM3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c5_CD8+_GZMK_PMID_34493872,T cell,GZMK,IGKV1-5,CST7,CD8A,ZFP36L2,PASK,CD8B,GZMM,ITM2C,CRTAM,IGLV3-25,TC2N,IGKV3-11,KLF2,KLRG1,DUSP2,IGLV1-40,CD74,LIMD2,P2RY8,MBP,FCMR,CCL5,GIMAP7,DENND2D,SHISA5,GIMAP4,HLA-E,COTL1,GLTSCR2,NFATC2,IGKV3-20,IGKV1-9,LYAR,SH2D1A,SELPLG,CCR7,GZMA,NUCB2,TERF2IP,SELL,CD27,CNN2,IFITM1,NKG7,CCDC109B,LINC-PINT,CYBA,AES,38961,STK17A,CMC1,IL16,R3HDM4,RARRES3,JAK1,PPDPF,TCF7,ATM,EIF3G,ANXA11,CORO1A,GYPC,DGCR6L,JUNB,HLA-DPB1,40057,LCK,RNF125,PRMT2,TECR,LITAF,BTN3A2,BTG2,PSMB10,CD3E,HLA-DQB1,SARAF,ARPC5L,RBCK1,ITGB2,PHB2,TBC1D10C,PIK3R1,MYH9,FKBP8,NDUFV1,RSF1,ABHD14B,PEBP1,GOLGA4,MTDH,ZAP70,ADAR,TAPBP,HIST1H4C,ZYX,HCST,GNB2,WAS,DEF6,FYN,EIF5A,FYB,SIGIRR,CD37,GRB2,IKZF3,CAMK4,IKZF1,NDUFB10,SLC25A6,APRT,GPSM3,ZNF331,DAZAP2,DDIT4,RAB1B,TMC6,WIPF1,PPM1K,SLFN5,TSC22D4,TAP1,YWHAB,RNF213,GUK1,PCBP2,PNRC1,ACAP1,HERPUD1,EEF2,NCOR1,37135,AIP,ARL4C,PPP1CA,RAC2,MX1,JTB,TMEM2,EIF3F,CD3G,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c7_CD8+_IFNG_PMID_34493872,T cell,CCL4L2,CCL4,GZMK,IFNG,GZMH,GZMA,CCL5,NKG7,CD8B,CD8A,CST7,ITM2C,HLA-DRB1,HLA-DPB1,HLA-DRB5,HLA-DPA1,HLA-DRA,HLA-DQA1,APOBEC3G,CLEC2B,CTSW,GZMB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c8_CD8+_LAG3_PMID_34493872,T cell,CCL4L2,CD8A,KRT86,GZMB,CCL3,LAG3,CCL5,CXCL13,CD8B,NKG7,CCL4,GZMH,CXCR6,PTMS,HLA-DRB5,HAVCR2,ALOX5AP,PDCD1,CTSD,PRF1,RP11-291B21.2,CD63,GZMA,HLA-DRB1,HLA-DPA1,CTSW,APOBEC3G,ZNF683,TNFRSF9,HLA-DRA,CHST12,HLA-DQA1,CRTAM,HLA-DQB1,LSP1,APOBEC3C,CD82,ACP5,HLA-DPB1,MIR155HG,RBPJ,TIGIT,FASLG,CD27,CD74,IFNG,ITGAE,CD7,JAML,SH3BGRL3,SIRPG,PHLDA1,CST7,CLEC2B,FKBP1A,ANXA5,SIT1,CBLB,LY6E,ZYX,RAB27A,CCND2,HLA-DMA,PKM,COTL1,IKZF3,TOX,LCP2,HCST,RABAC1,FABP5,PSMB9,BST2,PTPN7,CORO1A,LYST,ITM2A,PTPN6,EVL,DUSP4,SHISA5,LGALS3,IL2RG,ITGB2,CD3E,SYNGR2,PTPN22,LCK,PCED1B,RHOA,RAB1B,DRAP1,CTSC,PGAM1,PSMB10,SH3BP1,SLA2,ARPC2,CYBA,PARK7,PLSCR1,OASL,ZEB2,PPP1CA,CALR,KLRD1,MX1,PPDPF,TMEM179B,TAP1,ID2,CD3G,IDH2,COMMD7,ANXA6,LINC00152,EID1,HM13,CD3D,IFITM1,TSEN54,CLIC1,WDR1,RAC2,IL2RB,PSMB8,ITGB1,COX5A,TWF2,RAC1,IFI6,SCAMP2,CAP1,CAPZB,TYMP,WAS,TPI1,RASAL3,TBC1D10C,C12orf75,CDK2AP2,LSM2,UBE2L6,NCOR1,RBCK1,37135,CFL1,CAPG,IFI27L2,UCP2,RNF167,GNB2,SH2D2A,BAX,GABARAP,APBB1IP,ARPC5L,SLA,CLTA,ARHGAP9,PRDX5,PSTPIP1,DOK2,PPM1G,PDIA6,TNFRSF1B,TLN1,TSPO,BIN1,CHCHD10,PPP2R1A,CCDC85B,ARF5,CXCR3,PDIA3,UBXN4,SHFM1,FKBP8,C9orf16,SP100,LIMD2,NRBP1,PSMA7,CSK,ARHGDIA,CLEC2D,PPP1R12A,PPP1R18,ISG15,MDH2,TRAPPC1,ANXA11,AIP,POLR2E,SRI,ADGRE5,PRDX6,C19orf66,C20orf24,PRELID1
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c0_CD4+_CCR7_PMID_34493872,T cell,CCR7,PABPC1,SELL,LTB,GLTSCR2,GPR183,LDHB,CD55,KLF2,EEF2,NOSIP,TCF7,SARAF,EIF3E,GIMAP7,IL7R,FCMR,FXYD5,CCDC109B,EIF3L,SLC2A3,AES,FLT3LG,AQP3,GIMAP4,RNASET2,EIF3F,EIF2S3,MARCKSL1,SMDT1,EIF4B,JUNB,C12orf57,CAMK4,SLC25A6,FOXP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c1_CD4+_IL7R_PMID_34493872,T cell,IL7R,ANXA1,FOS,GPR183,CDKN1A,LMNA,KLRB1,FOSB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c2_CD4+_T-regs_FOXP3_PMID_34493872,T cell,TNFRSF4,FOXP3,BATF,IL2RA,TNFRSF18,CTLA4,CARD16,LTB,TIGIT,TBC1D4,AC133644.2,PMAIP1,RTKN2,GK,IL32,TNFRSF9,SAT1,ARID5B,CD27,HTATIP2,IKZF2,TNFRSF1B,PELI1,DNPH1,MIR4435-2HG,DUSP4,CTSC,ICOS,UGP2,PIM2,CORO1B,STAM,S100A4,GBP5,TYMP,TRAC,NAMPT,SYNGR2,GLRX,SPOCK2,RHBDD2,GBP2,CACYBP,CNIH1,CD74,PKM,BTG3,BIRC3,PBXIP1,PRDM1,ZBTB38,RGS1,FCMR,GPX1,SNX9,UCP2,SH2D2A,GRSF1,SOD1,PHLDA1,HLA-DRB1,SIRPG,UBE2B,TANK,TMEM173,CFLAR,WHSC1L1,ENO1,LINC00152,SELL,ZFAND5,RHOG,HLA-DQA1,USP15,COX5A,CD2,PARK7,EPSTI1,IL2RG,HERPUD1,HSPB1,SAMSN1,NDUFV2,SEC11C,ARL6IP5,NOP58,YWHAB,PPM1G,SKAP1,STAT3,CCND2,IL10RA,HLA-DRB5,MAT2B,PAK2,JAK1,AKIRIN2,P2RY10,ARPC1B,CALM3,SH3BGRL,PRDX1,STK17B,SUMO2,DOK2,ISG20,HNRNPLL,NOP10,VAMP5,IFI6,SCAND1,38961,RAC1,TNIP1,RAP1A,CMTM6,CREM,FKBP1A,HLA-DRA,CDKN1B,C9orf16,LAT,PGAM1,CAST,PRDX2,PAIP2,VMP1,UBE2D2,HLA-DQB1,PSMB3,PSMB8,COX8A,HLA-DPA1,TRBC2,GRB2,PSMB1,TNFRSF14,PTTG1,SDF4,COX17,COX5B,CSK,ATPIF1,ZNF706,SQSTM1,RNF213,ISCU,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c3_CD4+_Tfh_CXCL13_PMID_34493872,T cell,CXCL13,NMB,NR3C1,CD200,ITM2A,DUSP4,TSHZ2,TNFRSF4,RBPJ,TNFRSF18,FKBP5,GK,CTLA4,IL6ST,MAF,TOX,PDCD1,CD40LG,PPP1CC,CORO1B,CD82,PLIN2,SNX9,UCP2,ARID5B,SH2D1A,LIMS1,RNF19A,RAB11FIP1,BATF,FABP5,TGIF1,PKM,CNIH1,TIGIT,TANK,MTHFD2,RGS1,TNFAIP8,KLRB1,IQGAP1,NDUFV2,FAM107B,ISCU,C9orf16,DNPH1,VOPP1,RGS2,BHLHE40,HNRNPLL,PELI1,FKBP1A,CTSB,TYMP,SPOCK2,SEC11A,FYB,LAT,YWHAQ,TRAT1,COTL1,GRSF1,EPSTI1,BIRC3,CD2,EPC1,NFKBIA,HSPB1,TMEM173,RHBDD2,PGAM1,SEC11C,PRDM1,LBH,CFLAR,ALOX5AP,OXNAD1,IFI16,PMAIP1,NAP1L4,RABGAP1L,BST2,SOD1,RORA,ANAPC16,GPX4,PEBP1,SLA,ATP5G2,CIRBP,SAMSN1,CD6,BRK1,PRDX1,ITGB1,TSPO,HMGN1,38961,LY6E,MYCBP2,ANP32B,SHFM1,ARID4B,WDR83OS,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c9_NK_cells_AREG_PMID_34493872,NK cell,GNLY,TYROBP,AREG,FCER1G,XCL1,XCL2,KLRC1,TRDC,KLRD1,CMC1,GZMB,CTSW,HOPX,NKG7,KLRB1,MATK,MAFF,IL2RB,REL,LDLRAD4,CD7,IFITM2,NR4A1,IFITM3,MAP3K8,TNFRSF18,GSTP1,CD63,IER2,ZNF683,BHLHE40,SYTL3,PRF1,GPR65,FOSB,CTD-3252C9.4,GADD45B,ADGRE5,FOSL2,CD69,ID2,NFKBIZ,LITAF,KDM6B,GZMA,CDC42SE1,CCL5,CAPG,PTP4A1,SEC11A,CD55,GLIPR2,NR4A3,CNOT2,CLEC2B,FOS,NFE2L2,NR4A2,IFRD1,APOBEC3G,PIK3R1,CST7,TGFB1,VPS37B,RALGAPA1,IRF1,CCL4,ZNF331,CTSD,BST2,GABARAPL1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c11_MKI67_PMID_34493872,T cell,STMN1,HIST1H4C,TYMS,HMGN2,TUBA1B,MKI67,RRM2,UBE2C,HMGB2,CENPF,NUSAP1,HIST1H1E,TOP2A,HMGB1,CKS1B,DUT,ASPM,PTTG1,SMC4,CDK1,TPX2,CENPM,H2AFV,PKM,DEK,TMPO,RANBP1,H2AFZ,CDKN3,HIST1H1B,TMEM106C,CCNA2,PFN1,TK1,ZWINT,CALM3,BIRC5,CDC20,ANP32B,HLA-DRA,CLSPN,PCNA,CXCL13,SMC2,ASF1B,MCM7,CENPW,KIAA0101,CD74,ENO1,TPI1,FABP5,COX5A,CENPU,IDH2,ANP32E,UBE2T,PGAM1,KIF22,PKMYT1,CCNB2,RPA3,PLK1,HLA-DRB5,H2AFY,NUDT1,COX8A,KIFC1,ANAPC11,GNG5,CDCA8,PPIA,DHFR,ATP5G3,YBX1,CARHSP1,ATAD2,CENPE,NUCKS1,HIST1H1D,KIF20B,DTYMK,MCM5,PSMB9,RAN,COTL1,MAD2L1,PHF19,MCM3,EZH2,SIVA1,ANXA5,RAD21,SNRPD1,CFL1,ACTG1,FEN1,SMC1A,PPP1CA,YWHAH,HMGB3,GSTP1,GTSE1,CKAP2L,USP1,CCL3,DLGAP5,CENPN,PRDX3,DNMT1,ARPC2,DNAJC9,LSM4,CDCA5,GINS2,AURKB,DDX39A,CENPK,BANF1,HMMR,EIF5A,C12orf75,PSME2,CORO1A,LMNB1,HIST1H1C,RAD51AP1,HLA-DPA1,UHRF1,CDT1,HLA-DRB1,SNRNP25,LGALS1,NUF2,PDIA6,RALY,PTMS,TPM4,SKA2,TALDO1,HMGA1,SNRPB,LY6E,CHCHD2,SMC3,MT2A,PARK7,NCAPH,HMGN1,SLC25A5,STRA13,H2AFX,ARPC5,LSM2,HNRNPA3,WDR1,LSM5,MAD2L2,CDCA7,CASC5,SSRP1,AP2S1,HELLS,HLA-DQA1,SAE1,ERH,PPM1G,HN1,SPC25,PRELID1,TCF19,PARP1,PSMC3,KPNA2,PRC1,RHOA,SNRPC,LSM3,PDCD5,PSMB8,NDC80,SAC3D1,SNRPG,SGOL2,GMNN,RNASEH2A,ZDHHC12,CCDC167,RRM1,HSPB11,PSMA7,PSMB2,PSIP1,FKBP1A,NCAPG,TPM3,MX1,MCM4,RBX1,CDK2AP2
A single-cell and spatially resolved atlas of human breast cancers,34493872,T_cells_c10_NKT_cells_FCGR3A_PMID_34493872,T cell,FGFBP2,GNLY,NKG7,FCGR3A,PRF1,GZMB,SPON2,TYROBP,KLRD1,GZMH,FCER1G,KLRF1,CCL3,PLAC8,GZMA,CST7,CLIC3,CTSW,CCL4,HOPX,PLEK,TRDC,CMC1,CD247,GZMM,KLRB1,CYBA,EFHD2,ITGB2,MATK,C12orf75,ZEB2,APMAP,PYHIN1,BIN2,IFITM2,CCL4L2,LITAF,LGALS1,GSTP1,HCST,IER2,TPST2,ID2,CDC42SE1,GPR65,CCND3,FAM49B,FLNA,DSTN,CCL5,AKNA,ARPC2,GADD45B,CD63,XBP1,DBI,NEAT1,EMP3,SYTL3,ARPC5L,CD53,CTSC,APOBEC3G,XCL2,IFNG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,B cells Memory_PMID_34493872,B cell,HSPA1A,HSPA1B,DNAJB1,KLF6,HSP90AA1,HSPH1,DUSP2,DNAJA1,FOSB,PPP1R15A,HSPA8,CDKN1A,HSPE1,SRGN,NR4A1,UBC,NR4A2,S100A4,NEAT1,MCL1,HSP90AB1,GPR183,COTL1,JUND,CD82,VIM,HSPD1,DYNLL1,AC090498.1,NFKBID,ID3,MTRNR2L12,CTSH,SQSTM1,UBB,CD99,SAT1,PLP2,S100A10,TUBA1A,CAPG,CMTM6,DNAJB6,PRDX1,HIGD2A,SMIM14,CD44,YPEL5,IER2,LSP1,ACTG1,ZFAS1,PTGES3,S100A6,CD24,TAGLN2,MIF,COX6C,SEC61B,RGS2,SOD1,MOB1A,EMP3,MAP1LC3B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,B cells Naive_PMID_34493872,B cell,TCL1A,BACH2,IL4R,FCER2,IGHD,CLEC2B,PLPP5,CD72,BTG1,GABPB1-AS1,STK17A,HVCN1,FOXP1,RCSD1,TMEM123,SEC62,TSPAN13,ISG20,CLEC2D,TXNIP,SARAF,FAM129C,LINC00926,MGP,TMEM2,CD79A,GLTSCR2,ZFP36L2,SNX2,RHOH,CYBA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c10_Macrophage_1_EGR1_PMID_34493872,Macrophage,SEPP1,F13A1,SLC40A1,CCL4,JUN,CCL3L3,DAB2,EGR1,CCL3,MS4A7,PLTP,CCL4L2,FOLR2,RHOB,STAB1,MRC1,RNASE1,DNAJB1,C1QB,NR4A2,C1QA,ATF3,FOSB,MAF,HSPH1,SLCO2B1,KLF2,LYVE1,GPR34,MMP19,CD209,GADD45B,CITED2,IER3,C1QC,BAG3,ZNF331,IGF1,RBKS,MAFB,IER2,ABCA1,HSPA1A,CXCL2,LGMN,FCGRT,KLF4,HSPA1B,PMP22,DNAJA4,ZFP36L1,CSF1R,SNHG12,ARHGAP18,KLF6,CD83,MS4A6A,ARL4C,A2M,BTG2,MS4A4A,CD163,JUNB,CHMP1B,SGK1,FCGR2A,SNX6,IER5,WWP1,ADAP2,NR4A1,FRMD4B,EIF4A3,GYPC,PPP1R15A,RGL1,IGFBP4,CFD,SDC3,ABL2,TMEM176A,NFKBIZ,HSPB1,NAIP,SPRED1,RB1,JUND,ZFP36,C5AR1,LILRB5,TMIGD3,NRP2,AP2A2,CD93,MTSS1,VSIG4,MERTK,LMNA,GLA,KCTD12,CXCL3,PHLDA1,SERTAD1,TNF,RBPJ,TMEM37,NINJ1,ITPR2,PLD3,ICAM1,OLFML2B,TMEM176B,LRP1,LPAR6,MYLIP,ME1,HBEGF,FUCA1,CD14,BMP2K,ITSN1,CXCL8,MARCKS,NRP1,UBE2S,RASSF4,TGFBR2,SLC16A10,SIGLEC1,ID2,ZFHX3,TFRC,RP11-160E2.6,CEBPD,NEU1,SLC5A3,ZFAND5,GAS6,SMPDL3A,MAT2A,CLTC,PLAU,C2,HES1,RANBP2,AP1B1,LTC4S,CREG1,LY96,CPM,RUNX1,CD81,GAL3ST4,RGS1,FRMD4A,EPS15,NAMPT,NFKBIA,FCGR3A,SOCS3,MSR1,PDE4DIP,SNX9,MKNK2,PMAIP1,TNFAIP3,MFSD1,TSPAN4,DNAJB6,CREM,AHR,CD4,AKR1B1,PPP1R10,DNAJB4,GPR155,FCHO2,RNF130,FAM20A,DNAJA1,CTSC,SLC4A7,CTD-3252C9.4,HIF1A,MGAT4A,NCF4,MIDN,DDIT3,TIMP2,MYO5A,EPHX1,PRNP,PLEKHO2,HNMT,PFKFB3,ENPP2,CYBB,RASGEF1B,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c12_Monocyte_1_IL1B_PMID_34493872,Monocyte,IL1B,CLEC10A,LGALS2,AREG,FCN1,TIMP1,EREG,C15orf48,PPA1,DUSP2,G0S2,LST1,INSIG1,RGCC,JAML,HBEGF,CKLF,SERPINA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c2_LAM2_APOE_PMID_34493872,Macrophage,APOE,C1QC,PLTP,APOC1,C1QA,FOLR2,RNASE1,IFI27,C1QB,CD14,TREM2,NUPR1,PLD3,GPNMB,TMEM176B,ACP5,MS4A4A,TMEM176A,SLC40A1,TXNIP,A2M,TNFSF13,SEPP1,CD9,CFD,HLA-DQA1,SERPING1,TSPAN4,LIPA,GIMAP7,CD59,MSR1,FCGR3A,DNASE2,FUCA1,LGALS3BP,CREG1,FCGR2B,SCPEP1,CD81,EPHX1,LAMP1,AKR1B1,TCN2,C1orf54,CTSL,PILRA,ACP2,C2,IDH1,GIMAP4,SLCO2B1,MGST2,NR1H3,C3AR1,FCGR1A,LPAR6,LAMP2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c1_LAM1_FABP5_PMID_34493872,Macrophage,SPP1,APOC1,CTSD,FABP5,CTSL,GPNMB,NUPR1,PLIN2,APOE,C15orf48,CD9,GCHFR,BRI3,LIPA,TREM2,ASAH1,PLA2G7,ACP5,FN1,SDS,LINC01272,NPL,RNASE1,CCL3,MSR1,CD81,NR1H3,GM2A,MGLL,LHFPL2,VAT1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c8_Monocyte_2_S100A9_PMID_34493872,Monocyte,S100A9,S100A8,VCAN,FCN1,S100A12,TIMP1,EREG,THBS1,AREG,APOBEC3A,IL1B,CD300E,S100A4,SLC2A3,PPIF,SLC25A37,NLRP3,LYZ,SLC11A1,G0S2,CFP,STXBP2,CD55,CD52,CSTA,LILRA5,LST1,NAMPT,SAMSN1,PLAUR,BCL2A1,S100A6,COTL1,CXCL2,UPP1,AQP9,LINC00936,THBD,GPCPD1,FPR1,ANPEP,HBEGF,TREM1,VEGFA,RP11-1143G9.4,FGR,IL1RN,MXD1,KDM6B,MCL1,OLR1,OSM,GK,ACSL1,CSF3R,C5AR1,TNFRSF1B,FLNA,CD44,LINC01272,SERPINA1,CORO1A,FOSL2,ITGAX,TNFAIP3,LGALS2,RILPL2,ASGR1,ETS2,PDE4B,STK17B,GABARAPL1,LYST,SOCS3,JAML,SERPINB9,LCP1,C19orf38,GLIPR2,CEBPB,ARL4A,DUSP2,IRS2,LILRA2,CD36,VPS37B,CD93,PRKCB,PLAC8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c7_Monocyte_3_FCGR3A_PMID_34493872,Monocyte,LYPD2,TIMP1,LST1,LINC01272,CFP,CD52,STXBP2,IFITM2,FCN1,APOBEC3A,CYTIP,CD55,LILRA5,WARS,SERPINA1,COTL1,LILRB2,TCF7L2,FGR,MTSS1,RNF144B,ARL4A,NAAA,CTSS,SPN,CFD,FPR2,PLAC8,TNFRSF1B,NAP1L1,TSC22D3,C19orf38,SAMSN1,S100A4,LYST,CDC42EP2,CORO1A,PECAM1,MT2A,CD48,PTPRC,POU2F2,ICAM3,HES4,PAG1,LIMD2,ZFAND5,CUX1,TKT,FAM110A,PTPN6,CLEC12A,MYO1G,C10orf54,C5AR1,LILRA2,PILRA,FCGR3A,FAM49A,FAM65B,STX11,LRRFIP1,BCL2A1,LRRC25,CASP1,TESC,GPBAR1,ICAM2,RASGRP2,CDKN1C,TLE4,MTPN,LILRA1,TBC1D8,HCK,RAC2,CRIP1,LYN,FLNA,IRAK3,IFITM3,TUBA1A,SLC31A2,GCH1,RAP1B,SLC2A6,ZNF703,CCND3,NAMPT,BID,PTP4A2,GABARAPL1,PSME1,CDA,ABRACL,VASP,BIRC3,CPPED1,RBM3,UNC119,RILPL2,SH3BP2,WASF2,PAPSS2,LILRB1,RHOC,TES,UTRN,FAM45A,SIGLEC10,WSB1,MYD88,PRKCB,MSN,RASSF5,RNF149,KDM1B,ADGRE5,UBE2J1,MS4A7,RGS18,CDC42EP3,RXRA,40057,CD300E,LNPEP,SELPLG,PRAM1,SIDT2,GLTSCR2,RARA,DPEP2,ERICH1,EIF3L,LTB,SP110,MAPKAPK3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c9_Macrophage_2_CXCL10_PMID_34493872,Macrophage,CXCL10,CXCL11,CCL8,CXCL9,GBP1,TNFSF10,ISG15,IFIT2,IFIT1,GBP5,IFIT3,FAM26F,APOBEC3A,RSAD2,CCL2,GBP4,ISG20,IFITM1,MX1,IL4I1,IL32,WARS,PLEK,STAT1,VAMP5,IFI6,LY6E,IFI27,IFITM3,LAP3,ANKRD22,TAP1,IDO1,EPSTI1,OAS1,RARRES3,TNFSF13B,SERPING1,ATF5,CD40,GCH1,IRF1,PSME2,DYNLT1,NCF1,IFI35,CTSC,PARP14,SLAMF7,HERC5,IL1RN,IFI44L,SOCS1,DRAM1,IFIH1,APOL3,PSMB9,UBE2L6,SNX10,FCGR1A,SAMD9L,SOD2,NT5C3A,TYMP,CCL5,HAPLN3,SLAMF8,MT2A,OASL,XAF1,CD38,CMPK2,NUB1,GBP2,LILRB4,APOL6,RNF213,MARCKS,FN1,SLC31A2,USP18,CLEC4E,ICAM1,TMEM176B,C1QC,MX2,SSB,SAMD9,TNFAIP2,SERPINA1,OAS3,CCL4,NBN,EIF2AK2,PRDX1,GRINA,BST2,LILRB2,C1QB,NR1H3,OAS2,ETV7,NINJ1,DDX58,PPA1,IL15RA,GIMAP4,C19orf66,PSTPIP2,PML,PSMB8,PARP9,NMI,PSMA4,SMCO4,IFITM2,TFEC,NAGK,TMEM176A,FCGR1B,PDIA3,LGALS3BP,CCL4L2,FYB,RNF114,ZNFX1,BLVRA,HLA-DQA1,CD274,BAZ1A,FGL2,CTSH,C15orf48,DDX60L,CD47,PLSCR1,C1QA,FCGR3A,PSMB10,ATOX1,LYSMD2,PARP12,SCIMP,LYN,RABGAP1L,TNF,IFI44,LILRB1,APOE,BCL2A1,GPR84,IRF7,XRN1,KCNMA1,RBCK1,GLUL,NAPA,SPPL2A,RGL1,PVRL2,KLF6,SLC2A6,IGSF6,POMP,TNFAIP8,ADAR,CCL3,TRAFD1,CASP4,CTSL,TMEM50A,SYNGR2,FBXO6,STOM,ACP2,PILRA,CD80,APOBEC3G,GMPR,P2RY6,TRIM22,CBR1,PTAFR,STX11,CCR1,PLEKHO1,PSMA5,JAK2,IFNGR2,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,Cycling_Myeloid_PMID_34493872,Monocyte,HIST1H4C,STMN1,H2AFZ,HMGN2,TYMS,TUBA1B,HMGB2,UBE2C,MKI67,HMGB1,PTTG1,RRM2,TOP2A,CKS1B,CDKN3,RANBP1,TK1,NUSAP1,CENPF,DUT,CDK1,H2AFV,SPP1,SMC4,TMEM106C,CENPM,RAN,DEK,BIRC5,ANP32B,CDC20,NUCKS1,TPX2,STRA13,PCNA,KIAA0101,DTYMK,TUBA1C,CCNB2,KPNA2,CENPK,ZWINT,CLSPN,SMC2,RAD51AP1,RPA3,CENPW,DHFR,HMGB3,IDH2,PARP1,ANAPC11,SNRPD1,TMPO,LDHB,CCNB1,LSM5,CENPU,H2AFX,LSM4,SIVA1,DNMT1,SLC25A5,PLK1,EXOSC8,HMGN1,CARHSP1,SLBP,ARL6IP1,CALM3,LDHA,MAD2L1,ASF1B,MCM7,EZH2,ANP32E,ASPM,PHF19,LMNB1,MZT2B,RAD21,FAM111A,SKA2,LSM3,UHRF1,PRC1,DNAJC9,SNRPG,MCM5,ENO1,PGAM1,SNRNP25,HMMR,SNRPB,GTSE1,BUB3,CCNA2,EIF4EBP1,CENPN,COX8A,ATAD2,CDK4,PKMYT1,NUDT1,NASP,ATP5J,KIF22,PSME2,KIF20B,RHEB,USP1,UQCRQ,HN1,GGH,CKAP2,PKM,MCM3,PA2G4,EIF5A,HMGA1,GINS2,GMNN,DCTPP1,HNRNPAB,RNASEH2A,NCL,PSIP1,CDCA5,HIST1H1E,BANF1,FEN1,RRM1,SRSF10,DDX39A,COX5A,TOMM5,ERH,RAC2,PSMA4,CDCA3,MIF,AURKAIP1,MCM4,SMC1A,ILF2,ZDHHC12,NCAPH,PPDPF,SNRPF,HELLS,TPI1,CEP55,AP2S1,AURKB,HNRNPA1,PIN1,SNRPD3,SPC25,SRP9,TROAP,SNRPE,CDT1,FOXM1,UQCC2,ATP5J2,MCM6,MZT1,CBX3,PDCD5,NME4,NUF2,HSPB11,BOLA3,TIMM10,CCT5,SMC3,CCL2,PPM1G,MZT2A,TCF19,HPRT1,NCAPG,SNRPD2,ATP5G3,PRKDC,CENPE,LSM2,SSRP1,VPS29,KIFC1,SGOL1,HNRNPF,ORC6,CACYBP,YWHAH,CCDC167,GGCT,SHCBP1,SAC3D1,ANLN
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c11_cDC2_CD1C_PMID_34493872,Dendritic cell,CD1C,FCER1A,S100B,CD1E,HLA-DQB2,LTB,CLEC10A,CST7,AREG,LGALS2,JAML,COTL1,HLA-DQA2,HLA-DQB1,PPA1,INSIG1,CFP,PKIB,CD52,TUBA1A,MARCKSL1,MYADM,GPAT3,RGCC,CNN2,LSP1,CD55,HLA-DQA1,CYTIP,STK17B,NDRG2,PIM3,ANXA1,GSN,DUSP4,38961,EIF3L,REL,STK4,LRRFIP1,EZR,GDI2,HNRNPA1,PAK1,TAGLN2,IL2RG,FILIP1L,BTF3,PEA15,CORO1A,DUSP2,LIMD2,GABARAPL2,NFKBID,RILPL2,CXCR4,TES,SLC25A6,NR4A3,RIPK2,EIF3E,PLAC8,MAP3K8,ICAM3,NR4A1,PLD4,SUB1,CCND3,CDKN1A,VASP,STX11,EEF2,GPR183,EIF3F,CLEC4A,TCTN3,GRASP,RBM3,AIM1,SRSF2,C1orf162,PRCP,RHOF,ANKRD28,GLIPR1,ATP2B1,FGR,EIF3M,SYAP1,YPEL5,ACAP1,UVRAG,DDIT4,PHLDA2,EIF3H,CD1D,SLC2A3,EIF3K,CD69,LST1,ARL4A,CSF2RA,SLC25A3,CKLF,NAPSA,LITAF,TSC22D3,MYL12A,CKS2,RAB11FIP1,RASSF5,HINT1,DENND1B,CSRNP1,CCNI,RUNX3,ETV3,BHLHE40,NBEAL1,GLIPR2,NAP1L1,RALA,ALDH2,CD83,AP1S2,ACTR3,HMGN1,PHB2,CCND2,AVPI1,IFITM1,SPINT2,RBM39,NPM1,PTPN6,GNA15,GTF2B,UBE2E2,TIMP1,AKAP13,TIPARP,CXorf21,ACAA1,RAB24,RSL24D1,COPS3,AC090498.1,SUPT4H1,ZNF385A,HNRNPA0,CD86,ARF5,CAT,CRIP1,APEX1,SPN,DAPP1,COMMD6,CMTM6,ZFAND1,MYD88,FXYD5,CHD1,EIF3G,SERPINB1,OXA1L,CLIC2,SMDT1,GSTP1,ITGB2-AS1,PHACTR1,JMJD1C,CIB1,DEF6,PCBP1,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c4_DCs_pDC_IRF7_PMID_34493872,Dendritic cell,GZMB,PTGDS,JCHAIN,LILRA4,IRF7,ITM2C,PLAC8,TCL1A,LTB,GPR183,CLIC3,C12orf75,IRF4,TSPAN13,MZB1,SOX4,LDLRAD4,PLD4,C1orf186,PPP1R14B,IL3RA,DERL3,IRF8,SCT,SEC61B,TCF4,CXCR4,CCDC50,SERPINF1,UGCG,TRAF4,CXCR3,NR3C1,LRRC26,SMPD3,PTCRA,SPCS1,TPM2,MYBL2,MAP1A,AREG,CLEC4C,SPIB,PLP2,SELL,EGLN3,SEL1L3,DUSP5,RASD1,LAMP5,PTPRS,SLC7A5,DNASE1L3,BCL11A,FAM129C,EZR,LINC00996,DDIT4,CLN8,RAB11FIP1,SLC15A4,SIDT1,OFD1,IGKC,C9orf142,ALOX5AP,APP,CYB561A3,POLB,YPEL5,ZFAT,HERPUD1,SMIM5,SLC20A1,TXN,VIMP,ERP29,HSP90B1,HINT1,CCDC186,FCHSD2,PARK7,IFI44L,NUCB2,UBE2J1,ZC3HAV1,SRSF7,GPR65,PPM1K,RUBCN,NR4A3,IDH3A,LPIN1,CXorf21,IRF2BP2,RAC2,RUNX2,CD2AP,NEK8,PIM2,COMMD6,GAPT,ST6GALNAC4,IGHM,SUB1,SRP14,SSR4,GNA15,SHD,PRMT9,RRBP1,ANKRD11,STMN1,TSPYL2,LDHB,GPM6B,MAPKAPK2,SEMA7A,XBP1,MPEG1,RP11-117D22.2,DCK,CHAF1A,ERN1,MYL12A,SOCS1,P2RY14,PACSIN1,ODC1,HIST1H1C,TAGLN2,38961,GNG7,OPN3,PMAIP1,SLC38A1,CORO1C,37135,FAM53C,PMEPA1,SMIM3,LY9,PRKCB,LINC-PINT,IL2RG,N4BP2L1,EIF3L,ADAM19,DSTN,SPN,CCDC69,MX1,RP5-1171I10.5,AHI1,SCAMP5,HIGD1A,GNL3,SNHG7,CDK2AP2,INPP4A,PLA2G16,PLVAP,C12orf45,OGT,DDX24,SELPLG,BLNK,JAML,SEC61G,FYTTD1,ZNF10,SUSD1,BTG2,ISG20,SLC44A2,HIST1H2AC,GLTSCR2,OSTC,NOP58,CYFIP2,GPX7,FKBP2,CDKN2D,SRPRA,SNHG8,ATG101,SMC6,PHEX,SULF2,40057,PNISR,RHOF,CSF2RB,BCL2L11,DNAJB9,AKAP13,DAAM1,PPP1R2,FLNB,TRABD
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c3_cDC1_CLEC9A_PMID_34493872,Dendritic cell,CPVL,S100B,CPNE3,CLEC9A,DNASE1L3,LGALS2,SNX3,IRF8,RGCC,C1orf54,IDO1,TXN,WDFY4,DUSP4,LSP1,TACSTD2,RAB7B,GSTP1,TMEM14A,CCND1,TAP1,NAAA,LIMD2,CLNK,CNN2,PPA1,TAGLN2,SUB1,ENSA,NAPSA,38961,NET1,RAB11FIP1,TUBA1A,S100A10,ICAM3,CDK2AP2,CKS2,HLA-DQB1,SHTN1,SERPINB1,NAP1L1,CYB5R3,LSM6,G3BP2,ASAP1,ASB2,UCP2,COTL1,BATF3,CAMK2D,HLA-DOB,MYADM,KIAA0226L,CST7,XCR1,DBN1,FNBP1,BASP1,LCP1,ID2,HLA-DQA2,SRSF7,WARS,FLT3,HLA-DQA1,CADM1,RHOF,VAC14,RAB29,ELOVL5,HDAC9,BID,UNC119,HSPA8,EIF3L,GPR157,C1orf21,SERPINF2,HMGA1,KCNK6,PSMB9,PPT1,LDHB,C1orf162,ATP1A1,RGS10,CSRP1,LYRM4,ATG3,MZT2A,PPIF,C20orf27,BTF3,C1QBP,C12orf45,DUSP2,PSME1,H2AFY,EGLN3,HSPD1,SLC25A5,SLAMF7,CCT2,CD40,CORO1A,EIF5A,ACTR3,TUBA1B,MARCKSL1,HINT1,HSPB11,GDI2,PTPRE,CLIC2,TCTN3,UBE2N,EIF3H,HNRNPA1,ANXA6,NPM1,DAPP1,SNX22,LRRCC1,EIF6,GNA15,BIRC3,H2AFZ,LDLRAD4,QPCT,PIM2,SLC25A6,DENND1B,CD55,RNH1,CD52,PLCD1,COX5A,UBL7,CKLF,CCSER1,UPF2,COX7C,CCDC126,TPMT,CDC42EP3,EIF3F,CD48,CALCRL,ITGB2-AS1,RBM3,RAB5A,TMEM50B,NDRG2,EZR,IDH2,MPEG1,STK4,HMGN1,TOMM34,PDLIM7,PSTPIP1,RAN,SNRPF,YWHAZ,ITGB7,EIF3E,TBCB,STK17A,P2RY14,C1orf186,CCT8,GCSAM,ATP5A1,ARF6,SERTAD3,BTLA,PRDX2,MYD88,HMGB1,CCDC12,SAP18,CNPPD1,CYP2S1,CAP1,MAP3K13,BRD2,SERPINB9,RAB32,SNHG8,TRMT112,JMJD1C,ATP5F1,SLC25A33,OXSR1,SRSF2,ETV6,ENO1,LMNA,MAP4K1
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c0_DC_LAMP3_PMID_34493872,Dendritic cell,BIRC3,CCR7,CCL19,TXN,MARCKSL1,CCL22,LAMP3,FSCN1,IDO1,IL7R,EBI3,CST7,DUSP4,KIF2A,NUB1,LSP1,PPA1,GRSF1,STK4,RAB9A,DAPP1,TUBA1C,CSF2RA,GPR157,MGLL,KDM2B,DUSP5,CXCR4,CFLAR,ANXA6,RAB8B,POGLUT1,TRAF1,LAD1,BCL2L14,RFTN1,CD40,GPBP1,ID2,PTPN1,ZFAS1,IL2RG,BASP1,REL,IL32,TNFAIP2,CD1E,FAM60A,CLIC2,SAMSN1,LGALS2,CDKN1A,FNBP1,TBC1D8,RGS1,CD83,CYTIP,NAP1L1,ERICH1,VOPP1,RELB,RHOF,MIR155HG,MAP3K13,GSN,NET1,FLT3,SERPINB1,UVRAG,TRIP10,TBC1D4,NDE1,RASSF4,TNFAIP8,FOXP1,TRAFD1,NMRK1,CD200,SLCO5A1,ARHGAP10,NFKB1,FAM49A,CFP,C12orf45,NABP1,PPM1K,RUFY3,BZW1,GPR137B,GADD45A,FAM129A,LY75,IRF1,ZBTB10,TSPAN13,N4BP2L1,BCL2A1,JAK1,PELI1,ANXA7,GBP1,IL15,CLPTM1,CD274,ANKRD33B,N4BP2L2,LCP1,HLA-DQA2,TANK,NRP2,MAP4,YWHAQ,VAC14,NFKB2,MREG,TTYH2,HINT1,PTGES2,BIRC2,ALDH2,COA1,CCDC28B,LYST,CRIP1,ETV3,COX7A2L,CERS6,RNF144B,TUBA1A,MYO1G,TAGLN2,REPIN1,HLA-F,CEP350,PDCD1LG2,CDC42SE1,ARL6IP5,BCL2L11,ANTXR2,WDR33,CIRBP,SERTAD2,TRADD,LRRFIP2,DAAM1,PIAS1,SRI,PNISR,ATF4,SNN,SOCS1,RP11-138A9.1,TRA2A,LUZP1,LRRK1,ITGA4,BET1,BTN2A2,COMMD1,CYB5A,MAFF,SIAH2,MOB1B,RNF115,KYNU,DENND4A,NIT2,PMPCB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A single-cell and spatially resolved atlas of human breast cancers,34493872,Myeloid_c5_Macrophage_3_SIGLEC1_PMID_34493872,Macrophage,MT1X,KLF2,PLTP,RNASE1,STAB1,CD209,F13A1,RHOB,TMIGD3,RP11-160E2.6,SEPP1,SIGLEC1,DAB2,MTSS1,LGMN,C1QB,MS4A7,TTYH3,MAF,SLCO2B1,AP2A2,PLEKHG2,SASH1,C6orf62,PLXND1,C1QA,GLUL,AES,DNAJC25-GNG10,ADAMTS2,SORBS3,FOLR2,PTPMT1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Microenvironment drives cell state, plasticity, and drug response in pancreatic cancer",34890551,FCN1+ macrophages_PMID_34890551,Macrophage,FCN1,CFP,CD300E,AMICA1,LYZ,S100A8,LYST,FAM65B,PABPC1,CTSS,JUNB,COTL1,LGALS2,ZFP36,VCAN,LST1,S100A9,NFKBIZ,AP1S2,IL1B,CCR2,STK17B,CLEC12A,TPT1,LILRA1,NFKBIA,MEGF9,C10orf54,POU2F2,FGR,TKT,SELL,SLC25A6,MEFV,FOSB,PPP1R15A,APOBEC3A,S100A4,CD55,CDC42EP3,FOS,LCP1,MNDA,GNB2L1,SERPINA1,EEF2,CD48,FPR1,NR4A2,NAMPT,RGS2,CORO1A,CX3CR1,RASSF5,RAB3D,TNFRSF1B,S100A12,RASSF2,CCDC88C,CCDC69,PLAC8,DUSP1,EIF3L,TNFAIP3,PRKCB,TMEM154,EIF1,PTPRE,GLTSCR2,C19orf38,KLF4,EHD1,LILRB2,SMAP2,FYN,CD1D,PNRC1,LRRK2,METTL9,LILRA3,PTPRC,CSF3R,NFE2,NRGN,STX11,RILPL2,DUSP2,ADD3,LILRA2,CD244,NR4A1,SLC24A4,MAP3K3,SLC2A6,EVI2B,C11orf21,CSRNP1,PID1,LILRA5,NOTCH2,CLEC4E,MCL1,GAPT,CHD1,CARD16,SULF2,NACA,GLIPR1,AGTPBP1,SSH2,PTGS2,ICAM3,GMFG,EREG,MPEG1,USP3,ECE1,NLRP1,CPPED1,HCAR3,PTP4A2,GPBAR1,HCK,MYD88,KIAA0922,KIAA0513,ASGR2,LTA4H,LIMD2,ZNF703,ZFAND5,DAPP1,CSTA,TET2,PPM1F,CD36,TMEM170B,AHNAK,RAB11FIP1,MYO1F,CD300LB,SOD2,BIRC3,FBXL5,EIF4B,BTF3,NEDD9,FOSL2,TES,SERP1,NHSL2,ARL5B,SAMHD1,UBA52,PTX3,BIN2,LMO2,PFDN5,RCSD1,CYP1B1,VCL,APAF1,RAB27A,SOCS3,PTGER2,44083,IRAK3,MAP3K1,CALCOCO2,C15orf39,FFAR2,ITGAL,SLCO3A1,CDKN1A,TAGAP,YBX3,ZFP36L2,NLRP12,NID1,PELI2,SRSF5,FGL2,CASP1,MSRB1,STK38,GLT1D1,LDLR,BST1,CAMKK2,CBFA2T3,RASGRP2,HRH2,SCLT1,ZNF467,RXRA,CYBB,FAU,SIK1,TRAF3IP3,AOAH
"Microenvironment drives cell state, plasticity, and drug response in pancreatic cancer",34890551,C1QC+ macrophages_PMID_34890551,Macrophage,C1QC,C1QA,C1QB,SLC40A1,CD74,SEPP1,HLA-DRB1,FOLR2,SDC3,CMKLR1,HLA-DQA1,LILRB5,STAB1,CTSC,SLCO2B1,CD209,HLA-DOA,ENPP2,CD163L1,ITM2B,HLA-DPB1,HLA-DPA1,AXL,MS4A7,FCGRT,CSF1R,MS4A6A,C2,HLA-DMB,TMEM176B,ITGA9,CD163,IL2RA,RASSF4,FUCA1,SERPING1,CCDC152,AP1B1,AKR1B1,GIMAP5,HLA-DQB1,A2M,TCN2,GPR34,HLA-DRA,HLA-DMA,MAF,LGMN,RGL1,SIGLEC1,PLTP,CD4,MARCKS,HLA-DRB5,MS4A4A,FRMD4A,ABCC5,CXCL12,OLFML3,LAG3,MERTK,ADAMDEC1,TMEM37,TMEM176A,C3AR1,LPAR6,PLD3,CD14,ITPR2,SGPL1,FCGR2A,PDGFC,CLIC2,OLFML2B,ENTPD1,GAL3ST4,HLA-E,CREBL2,IGF1,AP2A2,LGALS3BP,FRMD4B,ARL4C,SNX6,SH3PXD2B,TMEM86A,MMP14,CREG1,VCAM1,DST,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Microenvironment drives cell state, plasticity, and drug response in pancreatic cancer",34890551,SPP1+ macrophages_PMID_34890551,Macrophage,SPP1,FLT1,FBP1,LDHA,LPL,C15orf48,EMP1,CSTB,FN1,ENO1,PKM,ALDOA,CHI3L1,MATK,ERO1L,CLEC5A,ALOX5AP,HK2,CSF1,PLIN2,CCL2,SLC2A1,TNS1,ADAM8,CD109,LGALS1,TPI1,DCSTAMP,SLAMF9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
"Microenvironment drives cell state, plasticity, and drug response in pancreatic cancer",34890551,PCs/Inflammatory_PMID_34890551,B cell,ANGPTL6,CCBE1,ADAMTS13,COLEC10,GDF2,CXCL12,NR1H4,DBH,RELN,TMEM56,MASP1,LRAT,FGFR2,COLEC11,LIFR,H19,STEAP4,ALDH1A1,VIPR1,IGF2,AL137026.1,OLFML3,INMT,RBP1,SYTL5,TNFRSF11B,CCL21,ITGA9,C7,NR2F1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster0_PMID_32451460,T cell,TNFRSF4,TNFRSF18,BATF,IL2RA,FOXP3,PMAIP1,AC133644.2,TIGIT,ICA1,LTB,SAT1,HSPA1A,LAIR2,IGHG3,TBC1D4,RTKN2,TNFRSF1B,BIRC3,HSPA1B,PIM2,DUSP4,CARD16,ICOS,DNPH1,UCP2,CTLA4,SPOCK2,ARID5B,CD27,HLA-DRB1,UGP2,CORO1B,IL32,IGHG4,GBP2,GPX1,ENTPD1,CD74,PBXIP1,RGS1,MIR4435-2HG,TRBC1,PRDM1,TYMP,TRAC,USP15,FAM129A,PKM,BTG3,HLA-A,RBPJ,GLRX,HLA-DQB1,IFI6,SOD1,RORA,MAF,COX17,S100A4,CREM,TNFAIP3,CTSC,RAC1,IL2RG,STAT1,TNIP1,NABP1,CALM3,CLEC2D,GATA3,SH2D2A,HLA-DPA1,SCAND1,SIRPG,HLA-DRA,TRBC2,STAT3,SLFN5,NEAT1,LINC00152,WHSC1L1,YWHAB,HSPB1,HSP90AA1,HLA-DPB1,CFLAR,NDUFB1,PPM1G,ISG20,SELL,XIST,NDFIP1,FCMR,CTSA,RP11-347P5.1,NDUFC1,SUMO2,RP11-138A9.1,OAZ1,NR3C1,TMEM173,MALAT1,WSB1,PRDX1,CMTM6,RSRC2,ZBTB38,RAP1A,IL10RA,AAK1,RHOG,UBC,CIRBP,JUND,PGAM1,CASP1,DUSP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster1_PMID_32451460,T cell,GZMK,CST7,CMC1,DUSP2,NKG7,KLRG1,CD8A,LYAR,CCL4,CRTAM,CCL5,CD8B,GZMM,EOMES,CD74,HLA-DPB1,ITM2C,APOBEC3G,CLDND1,SH2D1A,GIMAP7,GIMAP4,HLA-DPA1,GZMA,PTP4A2,PYHIN1,CCL4L2,ITGB2,HLA-DRB1,CTSW,CD27,COTL1,HCST,TRAT1,CLEC2B,BTN3A2,DENND2D,PPP2R5C,CXCR4,HLA-DRA,ARPC5L,STK17A,IGHG4,LITAF,GIMAP1,RARRES3,PSMB9,ATM,LIMD2,IGHG3,HLA-F,FYN,MYO1F,BIN1,RNF213,SRSF7,MALAT1,SIGIRR,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster2_PMID_32451460,T cell,CCR7,SELL,NOSIP,GLTSCR2,LDLRAP1,LDHB,EIF3E,PABPC1,JUNB,IGHG3,NACA,C6orf48,NBEAL1,TCF7,EIF2S3,TPT1,SNHG8,NPM1,ZFAS1,CD48,NAP1L1,SLC2A3,FOXP1,IGHG4,GPR183,PLAC8,SNHG25,TOMM7,FCMR,SMDT1,GNB2L1,EIF4B,EEF2,PFDN5,SNHG7,EIF3L,PIK3IP1,UBA52,EIF3H,CD40LG,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster3_PMID_32451460,T cell,BIRC3,IL7R,ZFP36L2,LTB,KLF2,CCR7,ANXA1,ITGB1,SELL,LDHB,GLTSCR2,CITED2,TOB1,NOSIP,TPT1,CD48,DUSP1,NFKBIA,FXYD5,FOS,TXNIP,TCF7,PRKX,PABPC1,CD40LG,ARHGAP15,GPR183,SMDT1,TMEM123,SNHG25,EEF2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster4_PMID_32451460,T cell,IGHA1,IL7R,JCHAIN,KLRB1,FOSB,IGLC2,FOS,TNF,CD40LG,ANXA1,JUN,GPR183,FKBP11,JAML,CD69,ID2,AC092580.4,TSC22D3,PTGER4,IER2,GPR171,GLIPR1,MCL1,ITM2B,PDCD4,DDX3X,TNFAIP3,PPP2R5C,DDIT4,CITED2,RORA,CD96,JUNB,TXNIP,ABRACL,ZFP36,TMEM123,IKZF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster5_PMID_32451460,T cell,CCL4L2,CCL4,CCL5,IFNG,XCL2,KLRD1,IGHA1,CD8A,XCL1,CD8B,HOPX,AC092580.4,JCHAIN,TRGC2,ID2,CD160,ITGA1,ITM2C,CTSW,JAML,CD69,ZFP36,ANKRD28,ABI3,GZMH,IGKC,GZMA,GZMB,IGLC2,LGALS1,RUNX3,ALOX5AP,CD52,MATK,PTGER4,NKG7,HCST,CD63,FOSB,STOM,SYTL3,FKBP11,GZMM,ANXA1,CD7,CD96,PRF1,DUSP2,GPR171,NR4A2,CLEC2B,TMSB4X,LAG3,CD99,COTL1,PDCD4,ITGB7,EVL,C9orf142,SH3BGRL3,CHCHD10,RGS1,CD3G,IDH2,OSTF1,STK17A,CKLF,ADGRE5,IL32,ARF6,RARRES3,PPP2R5C,LCP1,JUN,FYN,SEPT7,GUK1,HLA-B,CST7,CAPG,ZFP36L2,AKNA,EIF5A,GLIPR1,CD6,CYBA,MCL1,LEPROTL1,CHST12,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster6_PMID_32451460,T cell,TNFRSF4,TNFRSF18,KRT8,BATF,IL2RA,DUSP4,BIRC3,KRT18,AGR2,AC133644.2,IFI27,CTSC,FOXP3,TIMP1,TXN,S100A6,FTH1,PMAIP1,KRT19,LTB,ACP5,S100P,REG4,CARD16,MT2A,S100A4,IL32,LGALS3,PKM,SOCS3,DNPH1,HLA-B,CREM,FXYD3,MIR4435-2HG,PHGR1,ENO1,S100A10,SAT1,TYMP,ARID5B,EPSTI1,IFITM3,LINC00152,BTG3,LGALS1,GPX1,ZNF90,LDHA,C4orf48,ANXA2,TFF3,PRDX1,PRDX2,DYNLL1,CD7,ICOS,HERPUD1,SH2D2A,SLAMF1,GBP2,IL2RG,TMEM173,CORO1B,UGP2,ARPC1B,NFKBIA,PRDM1,NEAT1,PPIA,SPOCK2,FKBP1A,SCAND1,TIGIT,EVI2A,CD4,FXYD5,CSTB,PLP2,GSTO1,SARAF,TXNDC17,DYNLRB1,SAMSN1,ALDOA,TPM4,OAZ1,PGK1,PHLDA1,RGS1,PIM2,GTF3C6,STAT3,RBPJ,H3F3A,S100A11,HINT1,COX8A,GLRX,TNFRSF1B,COX17,SOD1,SDF4,MYL6,HLA-C,COX5B,CST3,YWHAB,SNU13,PPM1G,RHOG,TMSB10,TPT1,TSPO,IFI6,TAGLN2,SLC25A3,PARK7,POMP,TPI1,SUMO2,SMAP2,SERPINB1,COX5A,SQSTM1,PSMB1,SERBP1,ANXA5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster7_PMID_32451460,T cell,HSPA1B,COL1A1,COL1A2,HSPA1A,HSPB1,DNAJB1,CRIP1,RP11-138A9.2,S100A6,S100A11,TIMP1,MT2A,UGP2,S100A4,HSPE1,LINC00152,FKBP11,GPR171,DDIT4,KLRB1,ODF2L,IL7R,FTH1,JUN,AC090498.1,HSP90AA1,XIST,S100A10,HLA-B,FXYD5,LGALS1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster8_PMID_32451460,T cell,GZMB,KRT8,KRT18,GNLY,CAPG,ALOX5AP,ANKRD28,GZMA,MT2A,LGALS3,IFI27,GZMH,CKLF,C12orf75,SH3BGRL3,CCL4,S100A6,AGR2,AC092580.4,CD63,ANXA2,GLUL,HLA-B,S100P,VIM,S100A11,KRT19,S100A4,TXN,DRAP1,PGK1,CD2,CSTB,CD8A,LDHA,DYNLL1,RGS1,LGALS1,CD8B,EPSTI1,CD3D,REEP5,CLEC2B,ISG15,CIB1,ANXA5,LY6E,MYL6,ABI3,IFITM2,HN1,PYCARD,CXCR6,FXYD3,SUSD3,NUDT14,HLA-C,PERP,TPI1,CALM1,PSMB9,CFL1,GUK1,BLOC1S1,IFI27L2,ACTG1,MYL12B,COX8A,GPR171,LINC00152,TIMP1,ARPC2,CTSC,ID2,CTSD,TSPO,PSME2,CCL5,TPM4,RBPJ,IFITM3,CLIC1,TMEM50A,COMMD8,SNRPG,HLA-DRA,PARK7,DBI,SEC61B,PPP1R18,ENO1,CD52,CD3G,STK17A,ITGAE,POMP,HLA-DPA1,ATP5B,YWHAQ,IFI6,PLP2,RHOA,PRELID1,PFN1,COX7B,FKBP1A,RUNX3,ATP5J,CALR,ARPC3,GNG5,PRDX6,TMSB4X,COX6A1,RARRES3,SAMSN1,IDH2,MPC1,ATP5C1,APOBEC3G,ATP5G3,CAPZA1,S100A10,COX7A2,LCP2,DNAJC15,CD99,CCDC167,CLTB,HERPUD1,PPIB,PSMA7,CHCHD2,SAP18,HLA-DRB1,CTD-3252C9.4,SP100,TRBC1,LAPTM5,MPC2,ATP6V1F,RHOH,SEC61G,IQGAP1,ACP5,PSME1,HMOX2,HOPX,CST7,CD6,NDUFB10,ITGB1BP1,CCDC107,TBCB,UBL5,CORO1A,RAP1B,YWHAZ,GRAP2,PRDX1,CYTIP,MYL12A,ARPC1B,UBC,TCEB2,RBCK1,UBB,H2AFV,HSPB11,DNAJB6,NDUFB7,UBE2L3,RNF7,DYNLRB1,UQCRQ,NDUFA12,PPIA,PDCD1,SEPT7,SNRPB,CAP1,PSMB1,PSMB3,ZFAND6,PPP4C,RAB27A,SUB1,DEF6,MSN,NEDD8,NDUFB3,SOCS1,H3F3A,RBX1,PPP1CA,PSMB6,SNRPD3,SHFM1,ACTR3,OSTF1
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster9_PMID_32451460,T cell,AREG,GNLY,TYROBP,FCER1G,KLRD1,XCL1,NKG7,KLRC1,TRDC,KLRF1,CMC1,PRF1,CCL3,XCL2,GZMB,PLAC8,CTSW,MATK,IFITM2,HOPX,CLIC3,TXK,IER2,CCL4,GPR65,ID2,IL2RB,GZMH,GADD45B,ZFP36,CD63,CST7,GSTP1,XBP1,IFITM3,FOS,CHST12,KLRB1,CD7,C1orf162,CD247,CTD-3252C9.4,ITGB2,DUSP2,LITAF,NFKBIA,NR4A2,SOCS1,DDIT4,BST2,IRF1,TGFB1,CCND3,PRMT2,CTSD,CLEC2B,BIN2,REL,ADGRE5,SRGN,HMGN3,SPN,APOBEC3G,HCST,MYO1F,CD69,SEC11A,HLA-B,NEAT1,HSD17B11,ITGB1,GZMA,LUC7L3,HLA-C,CD164,CYBA,C12orf75,CIRBP,DHRS7,ATF4,UBB,VAMP8,BZW1,SRSF5,PRELID1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster10_PMID_32451460,T cell,CXCL13,FKBP5,TOX2,NR3C1,PCAT29,IL6ST,ICA1,BTLA,ITM2A,SMCO4,SESN1,SRGN,SLA,PASK,GNG4,LIMS1,CPM,TMEM243,CORO1B,RP5-1028K7.2,C1orf228,PDCD1,CD200,TOX,C9orf16,PPP1CC,ADD3,CD84,RNF19A,TIGIT,RILPL2,FYB,SH2D1A,ELMO1,CD40LG,MYCBP2,MTHFD2,SFXN1,UCP2,COTL1,SEPT6,TCF7,NFKBIA,VOPP1,LAT,CCND3,YWHAQ,RBPJ,GPX1,NAP1L4,FBLN7,CNIH1,H2AFZ,PEBP1,AIM1,ANP32B,MAF,GLCCI1,ISCU,RGS10,GYPC,DGKA,CD27,IKZF3,ARID5B,BIRC3,TBC1D4,FABP5,NAP1L1,DR1,CD82,ZMYM2,ICOS,PIK3IP1,OXNAD1,HPCAL1,CLPP,SYPL1,CCNI,TSPYL2,GATA3,CIRBP,LBH,IQGAP1,SEPT9,RNF145,SIRPG,AKAP13,GLRX,C10orf54,CCDC109B,EIF3L,GPX4,SNHG25,PGLS,FAM107B,CCDC167,EPC1,RAP1A,ITGAE,SMAP2,CD4,HMGN1,PTPRC,HINT1,PSIP1,ETS1,PRKCH,TMEM256,SPOCK2,GNG5,DEK,IGHG4,ATP5G2,EIF3F,VMP1,SOD1,CTSB,SH3KBP1,XIST,ARGLU1,ST13,RAN,C6orf48,NDUFB1,HMGN3,HLA-A,ANAPC16,AP3S1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster11_PMID_32451460,T cell,HSPA1A,CTSH,CCL20,AC092580.4,DNAJB1,KLRB1,CCR6,CKLF,LAG3,CXCR6,RGS1,YWHAH,TFF3,CMTM6,TNFRSF25,ADAM19,ARF6,GZMB,S100A4,CD2,CD40LG,CD3D,RORA,CAPG,JAML,SELT,HSPA1B,TMEM167A,EIF5A,LTB,CTLA4,AQP3,TPI1,RASAL3,PTPN7,RGS2,OSTF1,CD6,MIR4435-2HG,PERP,DUSP1,TPM4,IGKC,UBC,YWHAQ,ABRACL,SH3BGRL3,ANKRD28,PDCD1,SPOCK2,ABI3,CD3G,LIMS1,LAMP1,PIM1,SFPQ,PGAM1,HSP90AA1,NOP10,GPX1,DRAP1,COTL1,FMNL1,NDFIP2,CCDC107,VMP1,BZW1,GYG1,PBXIP1,S100A6,SOCS1,CACYBP,RBPJ,RP11-138A9.2,HSPE1,MGAT4A,DNPH1,ARPC1B,RAC1,MCL1,NDUFV2,RGL4,JUN,PPP1CA,CIB1,ENO1,PA2G4,EID1,CDC42,RAP1B,ALOX5AP,SRSF3,MAF,PKM,PCBP1,SF3B5,DBNL,TNFAIP8,STXBP2,LGALS3,ACTG1,CTSA,TRBC2,TANK,PFN1,CLEC2B,NMRK1,SRSF9,WDR1,PPP4C,HSPH1,KLF6,FKBP11,STK17B,MZT2B,RHEB,CAPZB,CFL1,LPXN,LAPTM5,LINC00152,SIRPG,PMVK,DNAJA1,PTPN6,HN1,EIF3I,CAP1,TRBC1,RAP1A,CD82,MT2A,TSTA3,POLR2G,LDHA,TMEM230,GPR183,EVL,CAPZA1,TBC1D10C,CTSB,ACTR3,MIF,CORO1A,YPEL3,BAX,ARPC2,PSMC5,CCDC167,KHDRBS1,RP11-138A9.1,DDIT4,HMGN1,AAK1,MYO1F,S100A11,NAA38,DYNLL1,GBP2,FKBP1A,HMOX2,TMED9,CD52,VDAC1,GDI2,DAD1,PEBP1,ACTR2,CALM1,PSMA4,SURF4,MYL6,SLC25A5,RANBP1,PSMA2,MZT2A,TMSB4X,CLIC1,ENSA,CSK,PGK1,ARHGAP30,RGS19,KDELR2,RTN4,LSP1,SNX6,SNRPB,ARPC3,MED4,CMPK1,NUTF2,ID2,SUMO1,RP11-796E2.4,ARL6IP1,CTSC,HSP90AB1,UCP2,MVP
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster12_PMID_32451460,T cell,GZMA,TRDC,FCER1G,CD160,TRGC2,CD7,KIR2DL4,KLRD1,TMIGD2,TYROBP,HOPX,CCL5,KLRC1,GNLY,ITGA1,CD63,IGLC2,KLRC2,AREG,JCHAIN,SPRY1,TXK,AC092580.4,GSTP1,CD96,IGHA1,CD247,GPR171,ANKRD28,FAM3C,LAT2,ABI3,TNFRSF18,CTSW,CLIC3,ID3,ZBTB16,PRF1,ENTPD1,IL2RB,NR4A2,CCND2,SCML4,C9orf142,CAPG,SYTL3,PTPN22,CBLB,ECI2,LSP1,SIRPG,NKG7,IL32,HCST,TRG-AS1,LGALS1,PRDX5,PCID2,MATK,CTSD,CCDC69,ITGAE,FTL,OSTF1,ITGB7,RHOC,RASA2,ID2,EVL,FYN,LCP1,PIK3R1,PTPN6,CH17-189H20.1,TMSB4X,SRGN,SEPT7,CDK2AP2,FKBP1A,TPI1,GPR65,PIP4K2A,JAML,NAP1L4,CAPZA1,TMED2,RUNX3,NSMCE1,GLIPR1,YBX1,CHST12,PTMA,ECH1,LPXN,TLN1,POLR2L,SAMSN1,ARPC2,INPP5D,RABAC1,CD69,SEPT2,STK17A,CD3G,PHPT1,FGFR1OP2,CKLF,NCL,CYTIP,C11orf31,PRKCH,CELF2,JAK1,RARRES3,ACTR2,IKZF3,MIF,CHCHD10,POLR2J3,CD52,HMOX2,ACTR3,GUK1,HSPA5,CD99,SDCBP,METTL9,SET,LIMS1,VASP,MYH9,C9orf78,CLEC2B,RGS1,ARF6,TRAPPC1,ANAPC11,RBM39,PPP1CA,CCL4L2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster13_PMID_32451460,T cell,GZMB,CCL3,GZMH,GNLY,CXCL13,NKG7,CCL4L2,HLA-DRB1,HAVCR2,LAG3,HLA-DRA,CTSW,APOBEC3G,CD8A,HLA-DPA1,CCL4,HLA-DQA1,PRF1,HLA-DPB1,CCL5,KLRC2,PHLDA1,APOBEC3C,ISG15,RBPJ,PTMS,MIR155HG,CD74,IFNG,ITM2C,NDFIP2,IFI6,CLIC3,CCND2,TNIP3,CD63,LY6E,CD8B,GZMA,HLA-DQB1,ACP5,PDCD1,IFI44L,CXCR6,VCAM1,KLRD1,CTSD,CDK6,TNFSF4,HLA-DMA,APOBEC3H,OASL,BHLHE40,CSF1,AC069363.1,IGHG3,CHST12,AC002331.1,ADGRE5,CALR,DUSP4,CISH,FAM3C,CD9,TRGC2,SH3BGRL3,CLEC2B,AC133644.2,CD82,IGHG4,MX1,IL2RB,LGALS1,SIT1,CXCR3,HCST,TYMP,TNFSF10,CTSC,SLC1A5,PLSCR1,IVNS1ABP,CD27,IFI44,CDKN2C,GABARAPL1,ID2,TRAC,GNPTAB,LYST,SAMSN1,BST2,RABAC1,LSP1,TRBC2,CRIP1,IGKC,RAB27A,AC092580.4,ENTPD1,ITGB2,S100A11,STK17B,ANXA5,IFI27L2,CD2,BLOC1S1,PTPN6,UBE2F,FABP5,PSMB8,ARPC5L,CLIC1,TIGIT,SAMD3,SDF2L1,RGS2,ITGAE,DRAP1,PKM,FKBP1A,MT1F,TOX,SPRY1,PSMB9,HOPX,PARK7,PMF1,RHOA,PAG1,SOCS1,ITGA1,RGCC,IFI16,HM13,SUPT3H,TPI1,CD2BP2,VIM,ALOX5AP,CKLF,NOP10,HSPA1B,TAP1,HSPA5,MANF,MSN,ANXA6,RNF167,CST7,CDK2AP2,NEDD9,PRDX6,GGA2,HSPB1,EIF2AK2,SAMD9L,ITGB7,PLA2G16,IL2RG,PSME2,PTTG1,SCAMP2,CORO1A,RASAL3,PSTPIP1,PPDPF,SLC3A2,DYNLL1,PET100,GNG2,ACTG1,IDH2,COTL1,PDCD10,DYNLRB1,TNFRSF1B,CCR5,C12orf75,COPZ1,PARVG,RALY,ATP5EP2,SHFM1,SUB1,RBX1,PDIA3,TXNDC17,PYCARD,EMP3,BAX,YWHAH,SLA2,UBE2L6,COMMD7,RBCK1,ARPC4,LCP2,CYCS,G3BP2
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster14_PMID_32451460,T cell,IGHA1,IGKC,KLRB1,TMIGD2,ID2,AC092580.4,TNF,MGP,JCHAIN,JAML,DDIT4,CFD,OSTF1,CD40LG,YWHAQ,S100A4,CXCR6,GPR34,DCN,SMIM3,ANKRD28,CKLF,IFI44,VIM,ALOX5AP,TPT1,ABI3,GLO1,MGAT4A,FKBP11,AC020571.3,SH3BGRL3,ADA,PERP,HOPX,CISH,CD48,CCDC107,SELT,RP11-160E2.6,CFL1,PLEKHF1,METTL9,SPN,CD2,IFNGR1,CCR6,LGALS3,CAPZB,ZFP36,CD3G,CAP1,PSME2,LST1,CTSH,S100A6,YWHAH,LAPTM5,VASP,GYG1,CD69,ITGB7,IL12RB1,MYL12A,ABRACL,OBFC1,TMEM167A,GBP1,RBL2,CALM1,HNRNPUL1,TPM4,CD3D,AQP3,PGK1,SOCS1,MYL12B,RHOC,CD3E,FABP1,ITGB1BP1,CD52,MSN,ACTG1,PHGR1,M6PR,CIB1,DYNLT3,BOLA3,SAMSN1,MYL6,ARHGDIA,RNASET2,IFITM2,RAP1B,CAPG,CSTB,IMP3,PA2G4,CCL20,LPAR6,SEPT1,ETHE1,JUN,ARPC2,SNRPB2,ITM2B,PPP1CA,PSMC3,GRAP2,CCDC85B,CD6,FERMT3,ARHGDIB,TTC39C,ANXA2,PDLIM2,BLOC1S1,PFN1,POLR2G,ARPC1B,IL7R,CD4,YBX1,CDC42EP3,NDUFB2,ECH1,CREM,TGFB1,ARPC4,ATP5D,TMEM14C,VAMP8,OXNAD1,S100A11,GPR171,RASSF5,TMSB4X,SYTL3,ZFP36L1,RORA,PRELID1,COMMD8,MANF,NMRK1,NDUFB10,CDC37,ADGRE5,FYB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer,32451460,KUL3 T cells_Cluster15_PMID_32451460,T cell,STMN1,KIAA0101,TUBA1B,HMGB2,TYMS,H2AFZ,DUT,HIST1H4C,TOP2A,TK1,MKI67,CKS1B,TMPO,PCNA,UBE2C,SMC2,HELLS,H2AFY,NUSAP1,DEK,ZWINT,ANP32E,CRIP1,BIRC5,MCM7,RRM2,KIFC1,PTMA,H2AFV,SLC25A5,GZMA,PTTG1,HMGB1,HMGN2,NUCKS1,CARHSP1,VDAC1,MT2A,LCP1,WDR34,SMC4,CCDC34,RANBP1,STRA13,NASP,TPI1,SET,CENPH,CDCA4,USP1,SEC11A,RPA3,NONO,SMC1A,RAN,MCM2,CDT1,HNRNPA3,MAD2L1,ESCO2,HSP90AA1,PPIL1,MCM5,TOPBP1,MCM3,CENPM,NABP2,ANP32B,NEDD9,SAE1,HSPA1B,LMNB1,DNMT1,DBI,CREM,COMMD3,ACTR2,DBNL,PA2G4,CYB5B,PRC1,NFATC2IP,VIM,CCDC167,AP2S1,YWHAZ,EBP,SRSF10,COX5A,TMEM106C,YEATS4,BLOC1S1,CKS2,SHFM1,TXN,IDH2,YBX1,RBX1,CACYBP,MAGOH,PPIA,NUDT1,SSRP1,SKA2,TIPRL,ATP5G1,DNAJC9,GDI2,LSM2,LSM5,HSP90AB1,PGAM1,H3F3A,HSP90B1,PSMA4,YWHAE,HNRNPU,TRA2B,TAF12,CBX3,NOP56,ARPC2,DDX46,SUMO1,PCBP2,SUMO2,FUS,PIM1,CAP1,CCT8,MZT2B,CHCHD2,ARL6IP4,PFN1,UQCRQ,UQCRH,COX8A,RBMX,SNRPD1,NDUFB11,NDUFB1,RHOA,COX7B,FKBP1A,CYCS,HNRNPH1,ACTG1,HNRNPK,ACTR3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD8_C01-LEF1_PMID_30479382,T cell,CCR7,CD8B,SELL,LEF1,NELL2,ACTN1,LDLRAP1,TXK,TCF7,NOSIP,TRABD2A,PLAC8,CA6,PRKCQ-AS1,ABLIM1,ANAPC1P1,MYC,NUCB2,CD55,SATB1,APBA2,SERINC5,TMEM123,CD248,RIPOR2,LINC00861,PRMT2,NT5E,ATM,PDK1,OXNAD1,MAL,RGS10,BACH2,LRRC75A-AS1,FAM117B,FOXP1,APEX1,PDE3B,S100B,PLEKHB1,LDHB,PGGHG,C1orf162,LINC01550,KLF2,RSL1D1,PTPRK,EIF3L,RIC3,TOB1,EIF3E,TSPAN32,PRKCA,LRRN3,PIK3IP1,CD27,C6orf48,TMEM204,PCED1B-AS1,USP11,CD27-AS1,NDFIP1,SNRK,CCND3,SPINT2,RASGRP2,NAA16,ITGA6,LEF1-AS1,CHMP7,NPAT,AP1M1,SNORA33,ST3GAL1,FLT3LG,CCDC18-AS1,FCMR,CRLF3,GAS5,NPM1,EEF2,GPR155,MFNG,C1orf228,RASGRF2,CARS,MYO15B,BEX4,BBS2,DGKA,C11orf21,PYCR2,AIF1,EIF2S3,EIF4B,AES,RCAN3,RBL2,LINC01089,LBH,TRAP1,ADPRM,PNISR,SPTBN1,ZNF101,PIK3CD,ST13,SNHG8,SNHG5,PWARSN,PCED1B,EIF3F,THEM4,EPHX2,APBB1,ALKBH7,SNRK-AS1,TACC3,LRRC75A,AKTIP,IL16,RNF157,NME2,TMEM243,HMGN3,ATP6V0E2,LEFTY1,DPH5,EIF3H,NBPF1,CARD10,RSL24D1,FBXO32,SERPINB6,NME1-NME2,NLRP1,SELENOH,SECISBP2,NUAK2,SNURF,LIMD2,FAM102A,DANCR,SYNJ2BP,SNRPN,SRSF6,LUC7L3,TPP2,UXT,RACK1,HSP90AB1,SDR39U1,ST6GAL1,REG4,NUP88,NOG,TMEM131L,CARMIL1,SUCLG2,FGD3,SYPL1,DENND2D,EXOSC5,IARS,IKZF5,SH2D3A,DENND5A,TBRG4,UBTF,SH3BGRL2,BNIP3,FBL,IGF1R,LEPROTL1,COQ8A,MLXIP,NIPAL3,DDX18,PMS2P1,ETFRF1,TTC14,ARHGAP4,CIAPIN1,PCSK5,ITFG2,PABPC1,NAP1L1,KRI1,BEX3,NR3C2,NHP2,TMC8,NOP53,TRMT13,PFDN5,DNMT3A,ATF7IP2,MPI,DNAJA3
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD8_C02-GPR183_PMID_30479382,T cell,IL7R,S1PR1,SORL1,ANXA1,ITGB1,GIMAP7,LTB,GIMAP5,TMEM63A,GIMAP1-GIMAP5,TXNIP,CAMK4,PATJ,CYB561,IL10RA,TC2N,S100A10,RASA3,GPR183,CRBN,C16orf54,ICAM2,INPP4B,TAGAP,ARHGAP15,ZNF652,CA5B,ITGB2-AS1,RCSD1,TRADD,PRR29,CDC25B,GIMAP1,TESPA1,CHD9,MCUB,CNN2,ORMDL1,LY9,GTF3A,KIF2A,ATP2B1,TTC3,NSG1,HAPLN3,LSR,EGLN2,CORO7,GALT,CDC14A,CASP6,S1PR4,PLP2,BIN1,GIMAP2,SPSB3,PCSK7,MORC2-AS1,TNFSF8,CCM2,ERP29,WDR6,PIM1,NAAA,MPP7,RNH1,FXYD2,FXYD6-FXYD2,WWP1,SMCHD1,DALRD3,NDE1,HELB,KLF3,CRIP2,DIMT1,CORO7-PAM16,SELPLG,FXYD5,OGDH,USP3,TRANK1,ZNF37BP,PSIP1,OGT,MTIF3,MYH11,TIMP1,DPYD,HERC2,EPHX1,RAB4B-EGLN2,SDCCAG8,KIAA1551,UBXN11,TPR,PMPCB,CNTRL,MAPKAPK5-AS1,CLUHP3,EPB41,GSTK1,GIMAP6,WDR77,ADK,SNHG6,EIF3G,CISH,GATA3,TSNAX,SGSH,CD52,ANK3,CBLL1,MAP3K1,PPP4R3B,ESYT2,NBDY,SSBP1,CRYZL1,TAGLN2,HERC4,NPDC1,FBXL8,ACSL6,LOC283788,C4orf3,RNF34,ESYT1,CTC1,TNFAIP8,WASHC4,ANKRD36B,CAST,LRRC8C,USP53,KCNA3,TAZ,CFAP36,C21orf33,RASSF3,NOP56,CHURC1,GCC2,C1QBP,6-Mar,LPP,CARD8,CREB1,SPNS1,NPC2,MCMDC2,ARHGAP5,GLG1,ADD3-AS1,ABHD14B,PYM1,PRPSAP2,CSDE1,LAT,HINT1,GRK6,SOD2,CD28,CHURC1-FNTB,REX1BD,LINC00649,S100A11,NOTCH2NL,ANAPC4,SBNO1,NECAP2,COX7C,MIR4709,NBPF10,IKBKE,MKRN1,LRRFIP1,ATP5F1,RNF103-CHMP3,TNFRSF10A,WASF2,ZNF44,CCDC66,CYLD,ATRX,CHMP3,ANTXR2,LY75-CD302,PBXIP1,SLAMF1,SESN3,TLDC2,C17orf62,IL27RA,DOCK2,TMEM173,TPP1,GLB1,SNX20
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD8_C03-CX3CR1_PMID_30479382,T cell,PLEK,NKG7,GZMH,FCRL6,FCGR3A,KLRK1,KLRD1,CX3CR1,KLRG1,FGFBP2,CTSW,PRF1,ADGRG1,FGR,S1PR5,A2M,SAMD3,SLAMF7,CST7,TGFBR3,PATL2,GNLY,MYO1F,ADRB2,SYNE1,LITAF,ZEB2,TTC38,HLA-DPB1,C1orf21,C12orf75,APMAP,PXN,FCGR3B,PRSS23,FLNA,PZP,RASSF1,CD300A,BIN2,TPST2,PTGDR,MBP,PYHIN1,EOMES,RAB29,KLRF1,CMC1,LILRB1,GIMAP4,CEP78,LYAR,ITGB2,ITGAL,TBX21,AHNAK,LINC00612,PTPN4,GZMM,EFHD2,SH3BP5,SLC9A3R1,USP28,RAB37,SH3BP5-AS1,MYO1G,ADD3,RAP1GAP2,ARHGAP25,FCRL3,GAB3,SPON2,CYTH4,LPCAT1,CLIC3,STK38,PTGER2,ITGAM,PRKCB,CAPN2,EMP3,GLUL,SASH3,RAP2B,SLAMF6,BTN3A1,DSTN,VCL,TTC16,OSBPL5,ZEB2-AS1,SPN,BTN3A2,PTP4A2,STK10,LIME1,NLRC5,RAP1B,ARL4C,ZGPAT,UTRN,PXN-AS1,DIP2A,RARRES3,KLRA1P,GSAP,RNF166,ANXA6,ZNF276,PIK3R5,NPRL2,NFATC3,PRR5L,MED15,TRAF3IP3,SYNE2,MIR3615,SYTL1,PLEKHF1,ARRB2,SH3BP2,BTN3A3,FANCA,PPP2R2B,AGTPBP1,SH2D3C,TNFRSF1A,ARHGAP30,S100A4,GK5,PPP1CA,PLEKHA1,XBP1,AKNA,TRPV2,MSN,ARHGEF3,LGR6,THEMIS2,ENPP4,FUT11,ZAP70,FBXW5,C1orf56,DAXX,SIGIRR,IFITM1,LUZP6,RGS19,TFDP2,CALHM2,CDC42SE1,FAM49B,LINC00944,MTSS1,PSMB10,PAFAH2,A2MP1,PTCH1,CD84,LGALS1,SUN2,PLEKHG3,PPP3CC,FAM49A,RCBTB2,RAD9A,APOL2,CYBA,SCP2,P4HB,ITGA4,PTPRCAP,TES,RPA2,PDGFD,CD47,MYD88,S100A6,TOR2A,CYTH1,C1orf174,KCNAB2,CASP1,TRAPPC2,EBP,UCP2,AXIN1,ANXA2P2,HMGN3-AS1,TCF25,LOC388692,CDC42EP3,ARPC4,DENND4B,TAOK3,PCNT,VAMP2,GEMIN7,CAP1
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD8_C04-GZMK_PMID_30479382,T cell,GZMK,DUSP2,SKIL,CXCR4,TUBA4A,DNAJB1,RUNX3,JMJD6,DNAJA1,NAA50,MIAT,TMEM2,PDE4B,STK16,SLC38A2,RGCC,RALGAPA1,RNF19A,CCSER2,KPNA2,IFRD1,ENC1,HSPH1,CD44,LMNA,SRSF2,NFATC2,SRGN,ITPRIP,CNOT6L,SRSF7,NEU1,ARHGAP26,LDHA,DNAJB6,DDIT4,SNHG12,FAM129A,AMD1,CLK1,IRF1,DKK3,HSP90AA1,TMEM43,MFSD11,EPHA4,DNAJB9,HSPA1B,PMAIP1,C5orf56,EMB,CRYBG1,WIPF1,HAUS3,TOB2,DDIT3,PDE7A,ERO1B,CHD1,ARHGAP35,HSPA1A,HSPD1,ASAP1,MIR636,ATXN7,DYNC1H1,CCNL1,FAM160B1,TERF2IP,GPR132,BTG1,SNHG1,GPCPD1,TRAPPC10,TTC13,CHMP1B,MLLT3,USP9X,BCAS2,H3F3B,NOP58,DENND2C,ZC3HAV1,TRPC4AP,RBM38,BCL6,PRKCQ,NEAT1,UBC,SENP7,SC5D,PTBP3,HSPA8,ELOVL5,UBA6,GCHFR,NDUFS5,HBP1,CFLAR,KDM2B,RILPL2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD8_C05-CD6_PMID_30479382,T cell,JAML,CAPG,PTGER4,FOSB,ANKRD28,ID2,MYADM,THEMIS,TNFAIP3,XCL1,XCL2,PPP1R15A,BTG2,PFKFB3,RASGEF1B,JUN,MGAT4A,PER1,YPEL5,LOC100130476,OSTF1,PDE4D,CSRNP1,CREM,EGR1,MCL1,LINC-PINT,LOC284454,FAM46C,STAT4,TUBA1A,DOCK10,IDS,ZFP36L2,CKLF-CMTM1,CKLF,ATF3,GRAP2,GPR34,ATF7IP,JUND,VIM,KLF6,DDX3X,SLC2A3,GFPT2,DENND4A,CCNH,MGAT5,LAIR1,KIF13B,JUNB,HSPA9,ATF4,GNG2,EVI2A,CYCS,ATP1A1,ODC1,CRY1,NME7,CD226,CPD,RAPGEF1,ZFAND5,MORF4L2,CITED2,USP36,JMJD1C,HIPK1,SOS1,FAM166A,AHR,MAN1A1,EZR,SENP3-EIF4A1,CD2,RELL1,MPC1,RGL4,SNORA67,MPZL3,USP20,MTFP1,STN1,NFKBID,PREX1,ELMSAN1,PPP1R15B,TPM4,CELF2,MBNL1,GTF2B,STK17B,GALNT6,CD6,POLR2A,EIF4A3,HECA,ABRACL,P2RY10,GNGT2,EZR-AS1,HNRNPUL1,EML4,ATP1A1-AS1,UFSP2,SPTY2D1,TUBA1C,MYLIP,ARL5B,TSC22D3,DDX24,SELENOT,GSPT1,BCL2A1,IRF2BP2,LPXN,PPP1CB,ADA,SNRPB,ABCA1,MYH9,TNF,TM2D3,TSC22D2,ATP11B,UBE2S,PNRC1,RBMX,DEGS1,LAPTM5,NFKBIA,ZBTB21,TACC1,TRA2B,PDCL3,SEPT1,DDX21,EIF1,CIB1,PLK3,FMNL3,ABCC1,APBB1IP,PPIL4,MTCH1,ME2,ARHGDIA,YWHAZ,NECAP1,IER5,HMGA1,CHD2,CDV3,TSPYL1,CCNI,SAT1,RNF149,CD83,CMTM3,GSK3B,NFKB2,CS,CLIP1,TRAF1,NBEAL2,RAD51L3-RFFL,GRAMD1A,RFFL,PBX4,HNRNPH2,RAP1A,NABP1,SOCS3,CMTM7,,,,,,,,,,,,,,,,,,,,,,,,
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD8_C06-CD160_PMID_30479382,T cell,KLRC2,KLRC3,CD160,ITGA1,KLRC4-KLRK1,TARP,HOPX,CCL5,AOAH,KLRC1,ATP8B4,GPR15,TMIGD2,PELO,CD63,KIR2DL4,NR4A2,ABCB1,LDLRAD4,KLRC4,SLA2,GPR65,LAT2,ADAM28,PTPN22,MAP3K8,ENTPD1,FOS,GPR171,UBASH3B,RGS2,SYTL2,NR4A1,RGS1,B3GNT7,STOM,RHOC,CD69,NR4A3,PLCG2,CD7,SYTL3,SCML4,IL18RAP,CD96,ABI3,CD244,PIK3R1,IKZF2,FOSL2,RANBP2,AUTS2,TIPARP,MSH3,IL2RB,ZNF331,SPRY1,ASB2,ZFP36,CBLB,CD101,RIN3,PIK3AP1,CCL3L3,IL12RB2,ENTPD1-AS1,REL,DGKD,ARHGAP9,CCL3L1,GSTP1,PLPP1,GPR18,PDE4A,CCDC69,BRE-AS1,TRG-AS1,PPP1R16B,CLDND1,VPS37B,DAPK2,PITPNC1,GNPTAB,ADRB1,SMIM3,SIK1,NCR1,TSPYL2,SSH1,PDCD4,C20orf24,MATK,FES,LILRP2,CDIP1,MAPK1,RBKS,LYN,FYN,PRMT9,MYO1E,NEDD9,SLC25A15,IRF4,SKAP2,PRKACB,SLC7A5P2,PTPN6,TGIF2-C20orf24,KIR3DL1,ATP8A1,MIR4680,SPRY2,THBS1,LINC00674,AKAP5,SH2D2A,CCDC173,AREG,DZIP3,ISYNA1,BCAS4,FAM3C,NR3C1,SERTAD1,LPIN1,RAB3GAP1,SH2D1B,SDCBP,NMUR1,ZBTB1,KIR3DL2,SKIV2L2,NCALD,PLXDC1,TCIRG1,BBIP1,SURF4,FCER1G,ADAM8,SERPINB9,PIP4K2A,HSH2D,GLIPR1,PPM1B,MAFF,SMG1P3,TIPARP-AS1,BABAM2,CHN2,RNF139,MAPRE2,PHYKPL,UBAC2,ZYX,PTK2B,PRKCH,ETF1,CCDC50,NUGGC,DHRS7,G3BP2,ID3,IRF8,CCRL2,TPI1,AP4B1-AS1,PTP4A1,FAM177A1,FAM53C,WHRN,APOBR,DENND1B,GADD45B,LAYN,KIR2DS4,PRDM2,HSPA5,NFKBIZ,PLEKHA2,PPP3CA,RAB8B,SLC12A6,DCTN6,MFSD14A,P2RX4,MIR3918,SLC7A5P1,CRACR2B,ARHGEF7,PRDX5,DOCK5,IL21R,CHD7,STARD3NL,TNFSF14,COMMD5,MYO6,AKAP13,P2RX7
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD8_C07-LAYN_PMID_30479382,T cell,CD8A,GZMB,CCL4,HAVCR2,ITGAE,GZMA,HLA-DRA,CXCL13,APOBEC3G,CCL3,CCL4L1,VCAM1,HLA-DRB1,IFNG,HLA-DRB5,HLA-DRB6,FASLG,RBPJ,LAG3,HLA-DQA1,CXCR6,CRTAM,ITM2C,APOBEC3C,HLA-DQB1,LYST,DUSP4,OASL,HLA-DPA1,ZNF683,PDCD1,TNIP3,TNFSF4,CD82,PHLDA1,HLA-DMA,MIR155HG,NDFIP2,ANXA5,TNFRSF9,IDH2,CLEC2B,ACP5,MYO7A,SAMSN1,SLF1,CTSD,TOX,CHST12,BHLHE40,GABARAPL1,TBCD,RAB27A,AFAP1L2,DTHD1,IKZF3,HLA-DMB,PLA2G16,TIGIT,IVNS1ABP,ADGRG5,SH2D1A,PAG1,CD38,ADGRE5,GGA2,ITM2A,NAB1,F2R,APOBEC3F,MCTP2,GALNT2,CCDC141,CD74,HLA-DQA2,FUT8,PRDX6,COTL1,DUSP10,PLSCR1,SIRPG,SEMA4A,FKBP1A,CCR1,LGALS3,CTSC,TTN,HERPUD1,CXCR3,PDE4DIP,GOLIM4,CCND2,AHI1,CLIC1,JAKMIP1,SMC4,SRGAP3,KRT86,ARAP2,ATP1B3,TTC24,SLC7A5,ETV1,PSTPIP1,TRAF5,TANK,HMGB2,FABP5,SLC27A2,BHLHE40-AS1,APOBEC3D,YARS,STMN1,REEP5,APOBEC3H,IQGAP1,MYO5B,MAP4,HLA-DQB2,ATXN1,NUSAP1,IFI6,SGMS1,LRMP,CDK6,RALA,BCL2L11,BST2,SARDH,MIR155,RABAC1,SYT11,GYG1,PTPN7,PTTG1,B3GNT2,CD9,CSF1,GLIPR2,MCOLN2,SNAP47,ST8SIA4,UBE2L6,PARVG,SLA,CASP3,PTMS,CCR5,KRT81,DRAP1,SLC3A2,PARK7,FKBP1A-SDCBP2,RYR2,IFI16,HNRNPLL,UBE2A,ASXL2,SAMD9L,PDIA6,ATP10D,MCM5,CDK2AP2,SEPT7,SCCPDH,CPNE7,CRIM1,PRKAR1A,SRI,SP140,UBE2F-SCLY,ARF6,MKI67,B3GNTL1,NELFCD,GBP1,PSMB2,UBE2F,ETNK1,SLC25A5,ARL3,KIF21A,PSMB9,EZH2,MCM6,GPR174,RAB1B,MAD2L2,ARHGAP18,SQLE,PON2,CD2BP2,AKIRIN2,PSME2,CLSTN3,LAP3,CKS2,SLC5A3,DYNLL1,GALNT1
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD8_C08-SLC4A10_PMID_30479382,T cell,SLC4A10,KLRB1,NCR3,IFNGR1,FKBP11,COLQ,ZBTB16,DPP4,ALOX5AP,MYBL1,ODF2L,RORA,DUSP1,PARP8,ME1,IL23R,RORC,LST1,TSEN54,ITGB7,PVRIG,PRR5,IPCEF1,ACAA2,TLE1,HELZ,PHACTR2,IL4I1,C10orf128,MVB12B,YWHAQ,FSD1,ERN1,A2M-AS1,ABHD15,MKNK1,ARPC5L,LTK,ACTN4,B4GALT1,PLXND1,RUNX2,GALC,P2RY14,CCDC107,DNAJC1,TNFRSF25,BZW1,SEC61A1,ANXA2,EHD1,HPGD,ARHGEF39,PNP,SNORA70,HACL1,PRNP,TRIM27,GTDC1,USPL1,ICAM1,SLC20A1,IER2,GLO1,TTC39C,TBC1D31,METTL9,CEBPD,TMEM71,ILVBL,AMPD2,ENSA,SESN1,RNF13,CERK,OPRM1,DLAT,DYNLT3,TSPAN15,SARS,LOC643733,OSTC,CTSH,ARNTL,ADAM17,FBXO3,CTDSP2,PRPSAP1,RARG,NFX1,AP2M1,RASA1,UBE2W,TSTA3,SSR2,CCR2,ZCCHC11,TRAPPC6A,POC1B-GALNT4,SIGMAR1,GDI1,SRP54,RTRAF,EIF3I,BIRC2,RUVBL1,CREB3L2,FEM1A,TRAM1,NR2C1,IFI44,PHACTR2-AS1,CHP1,MBOAT1,AQP3,NEK7,ADAM12,ELK3,PLTP,SETX,SPOCK2,NR1D1,NDRG1,CCR6,SPCS3,ACTR1A,EIF4G2,CCL20,ANP32E,GOLGA8A,PLEKHG5,ANAPC5,TMED2,FYCO1,TMEM9B,SERBP1,ETS1,CWC25,MAPK1IP1L,IL12RB1,RAB9A,TRIP12,GOLGA8B,GPR108,SMAD3,CCDC32,TOR3A,CACYBP,RHEB,SEC61B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C01-CCR7_PMID_30479382,T cell,CCR7,SELL,LEF1,TCF7,LDLRAP1,LINC00861,NOSIP,PLAC8,RIPOR2,PRKCQ-AS1,MYC,TXK,MAL,TRABD2A,ACTN1,GIMAP7,GIMAP1-GIMAP5,GIMAP5,SATB1,ABLIM1,C1orf162,RASGRP2,AES,PDK1,ADD3,ATM,TMEM204,LDHB,LINC01550,GIMAP4,ITGA6,NOG,EPHX2,MCUB,CHMP7,GIMAP1,NOP53,PRKCA,EIF3L,PIM1,TSHZ2,LRRC75A-AS1,PRMT2,OXNAD1,EIF3E,CA6,LEF1-AS1,PIK3IP1,PCED1B-AS1,ANKRD55,CAMK4,NUCB2,LIMD2,TMC8,C6orf48,BACH2,APBA2,FHIT,LUC7L3,PLEKHB1,GPSM3,CCDC18-AS1,UBQLN2,ST6GAL1,PCED1B,PNISR,ZRANB2,NELL2,GAS5,EIF2S3,GLG1,SLC40A1,ARHGAP45,SNORA33,SLC8B1,LINC01089,SDR39U1,CEACAM21,SRSF1,SVIL,DPEP2,BEX3,ADPRM,RCAN3,MDS2,ARHGEF18,TCEA3,NDFIP1,SPTBN1,IGF1R,STMN3,NSUN5P2,PSIP1,GPA33,IFITM1,TTC3,RACK1,MDM4,APBB1,APEX1,KHNYN,BEX2,LRRC75A,EIF3H,NPM1,FAM117B,SLC7A6,AP1G2,ST13,RIC3,GIMAP2,SYNJ2BP,PWARSN,LINS1,C1orf228,ANKZF1,TECPR1,NUAK2,SUSD3,RGS10,NOL4L,POM121,LOC374443,MAPKAPK5-AS1,PIK3CD,FAM153A,ADD3-AS1,FGD3,BBS2,STAT6,SNURF,TOMM7,PFDN5,MPP7,SELENOH,TNRC6B,GIMAP8,MAML2,LOC100289511,RSL1D1,WDR6,EIF3D,MLLT3,SMDT1,KLF3-AS1,IFNGR2,C1orf56,BEX4,AIF1,SSBP2,GAS5-AS1,GVINP1,DPH5,SLC25A45,CEP68,GCC2,PTPN6,LINC02067,ING4,CASP6,RNF216,DENND5A,GSTM2,PCMTD2,FBL,RNF157,LCLAT1,CTC1,SRSF5,UBIAD1,UBA52,AAK1,CASP10,NOL9,SNRPN,TPT1,NPAT,NDUFA12,NUP88,RPAIN,RGMB,LRRN3,SH2D3A,LRPPRC,CLUAP1,ZNF302,ZNF141,HMGN3,BTF3,C2orf68,TPCN1,NACA,RASGRF2,EEA1,DDX17,PNN,PAXIP1-AS1,MPHOSPH8,FXN,MPI
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C02-ANXA1_PMID_30479382,T cell,LTB,ITGB1,TRADD,PTGER2,LPAR6,TMEM123,INPP4B,AQP3,KLF2,TESPA1,TIMP1,ICAM2,PRR29,SORL1,CRIP2,MAP3K1,C16orf54,S100A10,GALT,FLT3LG,S100A11,PLSCR3,PI16,PLP2,RNASET2,CDC25B,FXYD5,CA5B,GSTK1,MFNG,ANK3,CRBN,TMEM256-PLSCR3,PATJ,CISH,NIPAL3,ATP2B1,TAGAP,TSPO,ARHGAP15,NME2,EGLN2,EIF3F,FLI1,CNN2,BIN1,M6PR,RCBTB2,CYB561,CBLL1,DPYD,CD52,VIM,APRT,LY9,UBXN11,GIMAP6,EIF4B,NDUFB9,MORC2-AS1,NME1-NME2,ESYT1,SIGMAR1,CHURC1,ERP29,EEPD1,C1QBP,VIPR1,S100A6,SPSB3,IL11RA,TNFAIP8L2,TRNT1,WDR86-AS1,CORO7,PHC1,HINT1,GRK6,RAB4B-EGLN2,MDFIC,ZNF652,FRY,CTDSP2,KIF2A,MTIF3,LRRFIP1,NSG1,PTEN,PDCD5,CHURC1-FNTB,IL17RA,SDAD1,CASP8AP2,TOB1,ADSL,GCSAM,CORO7-PAM16,SORBS3,USP46,ACVR2A,WDR86,ESD,MINK1,SLCO3A1,NCBP2-AS2,ATP5H,C4orf3,GIGYF1,TRAM1,EIF5A,PCNX1,ORMDL1,TMEM116,ITM2B,C8orf44-SGK3,HMGN4,CEP57,DANCR,RASSF3,SNED1,RNF126,MGST3,SF3A3,PLEC,TSTD1,SGK3,CFAP97,NEURL4,GPS2,MPRIP,CNOT7,TAF9,MTSS1,SLC35E2,THYN1,HELB,ANKRD36B,EBLN3P,F11R,SNHG6,LSR,CYP20A1,AFF1,EIF3M,NOL12,TRIOBP,GCLM,WDR46,PYURF,ANAPC5,DYRK2,GMPR2,SRP9,ACSL6,TRABD,RBM3,POLH,HNRNPF,SSB,RRP1B,UBE2G2,AKIRIN1,EIF2A,TNFRSF10A,SHARPIN,LYSMD2,TMEM147,CASTOR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C03-GNLY_PMID_30479382,T cell,PLEK,CX3CR1,NKG7,GZMH,FGFBP2,KLRG1,GNLY,TGFBR3,PRF1,A2M,S1PR1,MYO1F,SAMD3,SYNE1,CTSW,FCRL6,S1PR5,TARP,C12orf75,AHNAK,CD300A,HOPX,PZP,PXN,LITAF,FLNA,ADRB2,CCND3,PTPN4,PATL2,ADGRG1,TXNIP,SPN,CDC42EP3,ANXA2,C1orf21,CAPN2,SLC9A3R1,MBP,ITGB2,STOM,RASSF1,ITGAM,YWHAQ,EMP3,PRSS23,VCL,BIN2,RAB29,LYAR,EFHD2,ITGAL,FGR,SH3BP5,DSTN,NFATC3,RAP2B,SYTL1,SH3BP5-AS1,CYTH4,THEMIS,PLEKHG3,RAP1GAP2,SYNE2,ARL4C,USP28,CHST12,ANXA6,MYOM2,MYO1G,ITGB7,MYBL1,XBP1,TSPAN32,LINC00612,CYTH1,SPON2,STK10,SUN2,KLF3,PTGDR,DIP2A,ANXA2P2,GLUL,TBX21,DAXX,CD47,CHD9,TES,RBL2,THEMIS2,DHRS7,UTRN,RGS19,MIR3615,CD320,GZMM,GTF3A,PXN-AS1,ARHGAP25,BTN3A1,VAMP2,CYB561D2,PIK3R5,ARRB2,DNAJC1,PQLC3,ITGA5,TPST2,NPRL2,SH2D3C,PTP4A2,ARPC5L,LPCAT1,MOB2,PRR5L,PIP4K2A,A2M-AS1,CD48,MATK,SCML4,ERAP1,SLAMF6,PRKCB,PTCH1,SIGIRR,RAB37,IFITM2,BTN3A2,ARHGAP30,GLIPR2,TRPV2,SUGP2,PARP8,HCST,SND1,ZMYM6,DIAPH1,PROK2,PLEKHF1,SERPINB6,CALHM2,EFCAB14,LGR6,RHOF,KIAA1551,TGFBR1,ARHGAP1,AGTPBP1,TMEM35B,LTBP4,PSMB9,TMEM120B,GEMIN7,LUZP6,COPZ1,HEATR5B,FUT11,IQSEC1,EPS15,PPP2R2B,TSPAN2,CCDC65,ITCH,CEP78,CTDSP1,NCOA4,KCNA3,FBXW5,CANX,GIT2,MBNL3,TTC16,SH3BP2,SLC33A1,LILRB1,EIF4E3,NLRC5,TAOK3,ZEB2-AS1,PPP3CC,C6orf89,HPS3,TEX264,SSBP3,MCTP2,CALCOCO1,SENP5,ENPP4,CLN3,A2MP1,C21orf33,SLFN12L,AXIN1,CCDC88C,PTPRCAP,TBC1D19,ORAI1,MCRS1,APOL2
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C04-TCF7_PMID_30479382,T cell,GPR183,FOS,CD69,SERINC5,SLC2A3,BTG2,NR4A2,JUNB,ZNF331,SOCS3,CRYBG1,CXCR4,SC5D,YPEL5,USP36,RAPGEF6,DENND2D,SCML1,SNHG1,CHMP1B,TMEM131L,CHD7,AREG,PABPC1,JAK3,SLC2A14,DENND2C,FYB1,SARAF,MSL3,PRMT9,DNAJB9,LEPROTL1,LRIG1,CD55,LYPD3,USP3,MX2,ZNF268,RNF138,CHD2,PPP1R2,C9orf72,GPR18,RRN3P1,ZNF10,DDX21,SIK1,SF1,ARHGAP5,ZSCAN18,BTG1,SNORD31,ZFAS1,SRSF6,RNF139,IKZF1,ALG13,PLXDC1,MASTL,PGAP1,SNHG15,BIRC2,SRSF3,HAX1,SNHG8,SNORA70,DCTN6,FUS,LOC100131347,SLC16A7,ELMSAN1,PHF3,CHD6,ANKRD44,ANKRD36,SLC38A1,POLR3E,BORCS5,ENO2,BCLAF1,HNRNPH1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C05-CXCR6_PMID_30479382,T cell,ANXA1,IL7R,CD40LG,PTGER4,TNFAIP3,FOSB,NFKBIA,PPP1R15A,MYADM,DUSP1,NFKBIZ,JUN,ZFP36,CDKN1A,DPP4,KLF6,LOC100130476,CSRNP1,FKBP11,DHRS3,MCL1,CDC14A,EML4,ADGRE5,PER1,SNHG16,ZNF267,IL18RAP,TSC22D3,CD96,NR4A1,ZFP36L2,LOC284454,LINC-PINT,TNFSF13B,PLK3,STAT4,IFNGR1,EGR1,PDCD4,GLIPR1,IDS,MPZL3,DYNLT3,SPART,KDM6B,GPR15,MIR4680,JUND,DENND4A,SDCBP,TAGLN2,PPP1R15B,MAP3K8,HNRNPUL1,SERTAD1,KRR1,ARL4A,TMEM71,PPP3CA,DDX3X,SYTL3,ODF2L,NFKB1,BBIP1,TIPARP,LGALS3BP,RELB,RBMS1,SLC39A8,FAM177A1,EVI2A,FTH1,CRIP1,CCNL1,SELENOK,IER2,JMJD1C,ABCA1,GPR132,FAM166A,HIPK1,ABCB1,PNRC1,RELL1,SOD2,HSPA5,DUSP5,TUBA1A,RASGEF1B,EIF1,CLUHP3,SPDYA,ELL2,PPP1R10,CHD1,BCL2A1,RNF125,HECA,GADD45B,TCTEX1D4,ATP6AP2,CITED2,PRKX,SERP1,TIPARP-AS1,CDK17,HSPA8,SNORA67,H3F3B,PDIA3,ATF3,TAF7,MORF4L2,NR1D2,GRPEL1,PHF20,TSC22D2,TLE4,TAPBP,FKBP2,TUBA1B,MIR1244-2,ANKRD37,STIM2,SAR1A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C06-CXCR5_PMID_30479382,T cell,ICA1,IL6ST,TBC1D4,TOX2,PASK,CXCR5,IL6R,TOX,SESN1,FKBP5,MAGEH1,SLC9A9,DGKA,LRMP,BCL6,FAAH2,PTPN13,LIMS1,SMCO4,TNFSF8,TIAM1,FBLN7,NAB1,SH3TC1,THADA,PHACTR2,ITM2A,ELMO1,KIAA1324,BTLA,CEP128,CD200,SLC25A46,LRRC8D,BAZ2B,NAP1L4,TNFAIP8,CTSA,CHI3L2,SSH2,C9orf16,ITGB2-AS1,IL21,CD84,ITPKB,TRPS1,LINC01281,TP53INP1,ASAP1,SYPL1,IL16,SESN3,CH25H,DUSP6,CPM,POU2AF1,ARID5A,GLCCI1,ZBTB10,ZAP70,ABI1,PVT1,KAT6B,CTTN,SMAD1,SH3KBP1,YTHDC2,PLTP,AKAP13,TMEM243,BCL9L,XXYLT1,ZMYM2,NFATC1,HIF1A-AS2,VMP1,MTMR6,WDR74,TRIM13,CDK5R1,HMGN1,CIRBP,SREBF2,HBP1,FAM43A,USP4,H2AFZ,HIVEP2,MYCBP2,ZNF281,TSHR,SIAH2,SFXN1,YPEL3,VOPP1,BLK,FBLN5,PPP1CC,CCDC6,FAM107B,ZNF410,FOXN2,DCP2,LAT,P2RX5-TAX1BP3,PIP4P2,FYN,TSPYL2,NLRP6,RIC1,ITGB8,UBE2G1,MAN2A1,ZC3H8,ITK,SFI1,IGFBP4,LOC100130872,AFF3,IRF2BP2,PTPN14,LOC100506990,POMT1,TNIK,LMO7,TSPYL1,NFIA,SINHCAF,NUDT16,STK39,ZBED5,RBM6,ST8SIA1,SPNS1,TBC1D15,PPA2,CASD1,TLE3,AP3S2,C15orf38-AP3S2,CD79A,DLEU2,JARID2,ERGIC3,P2RX5,6-Mar,IFT57,CASC1,DARS,ESYT2,MTUS1,TOM1,MIR1204,CRTAP,RAP1GDS1,PITPNC1,CEP85L,HIPK2,FRYL,NAP1L1,ACSF3,TRRAP,NUP58,USO1,NXF1,FYTTD1,GGT7,BCAP31,SS18,ZNF83,LINC01578,U2AF1L4,PTPN11,FBXO34,CFAP36,SPATA13,KLHL6,ATPIF1,PRPF38B,TMBIM6,DZIP3,ARID4B,BRD8,UBE2E3,PON2,POR,ARHGAP10,SEMA4D,SERTAD2,PARVG,RLF,NGLY1,PRRC2B,HMBOX1,EIF1B,ARID1A,BBX,PNPLA8,USP11,ZNF8
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C07-GZMK_PMID_30479382,T cell,GZMK,GZMA,CCL4,CCL5,ITM2C,CST7,APOBEC3G,TRAT1,IFNG,CCL4L1,DUSP2,EOMES,PDE4DIP,TC2N,F2R,SH2D1A,COTL1,HNRNPLL,HLA-DPB1,CLDND1,SLF1,CD6,OASL,HLA-DRA,AOAH,DTHD1,HLA-DPA1,CRTAM,RGCC,CMC1,HLA-DRB5,ARAP2,APOBEC3C,HLA-DQB1,DNAJB1,GYG1,CLEC2B,DNAJA1,RABGAP1L,STK17A,IDH2,GGA2,JMJD6,WNK1,CD74,RARRES3,SLAMF7,PIK3R1,AP3S1,HMGB2,IQGAP2,TNF,ODC1,PVRIG,HSPH1,PYHIN1,APOBEC3D,APMAP,TUBA4A,NFATC2,CPNE7,DKK3,SKIL,SLBP,HSP90AA1,FAM160B1,IFRD1,DNAJA4,HMGA1,ARL6IP1,NEK7,DNAJB6,TBC1D2B,CNOT6L,BRD2,HSPD1,NAA50,CKAP2,ENC1,CCR5,TGFBR2,CASP3,HLA-DQB2,CD44,KDM7A,EVI2B,EPHA4,SEMA4A,ATXN7,AUTS2,MAPRE2,BICDL1,APOBEC3H,RUNX3,ATP1B3,SLC20A1,RNF213,TRMO,APOBEC3F,STT3B,EGR2,PLCG2,SRSF7,SLC38A2,MCOLN2,NEU1,STX11,TRAPPC10,C5orf56,SMC5,HSPB11,SLC2A1,ELF1,STK16,KRAS,NCOA2,CD81,TERF2IP,SRRT,TBCD,NIN,LAX1,KLF12,NELFCD,SENP7,TTC39B,SFMBT2,TRIM38,ARHGAP35,MARK3,COA1,NEPRO,IRF1,ARRDC3,DNTTIP2,IRF3,SRSF2,CCSER2,RANBP2,HLTF,PCNA,HCP5,TNFSF9,PLA2G16,DEDD2,ZNF644,BAG3,METTL23,EMB,DENND1C,RALGAPA1,EXOSC9,HSPA4,TECR,CD200R1,ZFAND2A,GTPBP8,NR4A3,FABP5,PPP2R5C,SIK3,AVL9,ATF7IP,NCOR1,TOB2,SLC35E1,PSMA7,CCL3L3,CYLD,POLR2A,ARID4A,MAP4,HLA-DMB,MXD4,STARD3,ZFYVE28,UHRF2,PAPOLA,TMEM170A,CAPZA1,FAM53C,SETX,ERP44,KMT2A,GTPBP1,ETNK1,TNKS2,FAM111A,STMN1,CDC73,NCOA1,SBDS,GCH1,FGFR1OP2,EWSR1,TBCC,RBM8A,SMG1,HEXB,FAM214A
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C08-IL23R_PMID_30479382,T cell,CTSH,ADAM19,CCR6,CXCR6,FURIN,KLRB1,CAPG,CCL20,LGALS3,JAML,IL23R,CD82,OSTF1,RORA,TANK,MGAT4A,PDE4D,ANKRD28,TNFRSF25,TPM4,AHR,ADA,CMTM6,TMEM167A,PLAT,TMIGD2,IL4I1,PLIN2,RUNX2,PFKFB3,IL12RB1,GPR34,PERP,GPR25,IL17A,PTPN22,C15orf53,FAM104A,SYTL2,IFI44,SELENOT,MAP3K4,CALCOCO2,CERK,NOTCH2,CKLF,CKLF-CMTM1,ERN1,RORC,SASH3,SURF4,GNA15,CCNH,HIF1A,GPR171,ABI3,ABRACL,MIR497HG,REEP3,TIFA,MCAM,RAPGEF1,CD5,MBOAT1,STIP1,YIPF5,GAB3,LPXN,BCL2L11,TBC1D31,GDE1,BLM,ASB2,DYNLL1,MKNK1,HMOX2,HDLBP,LINC00892,LDLRAD4,YWHAH,ATP2B4,ANP32E,REEP5,PSME2,LGALS8,GOLGA8A,ARHGEF7,UBE2L6,TBL1XR1,MIS18BP1,NMRK1,CLINT1,CPPED1,PRDX3,VDAC1,RAP1B,BZW1,C1GALT1,RNF149,PSMA6,PNP,PPARG,H2AFV,G3BP2,EIF3I,GPRIN3,ARHGAP18,ITGA4,SPTY2D1,RAB8A,SLC25A5,HELZ,MAPRE1,TALDO1,AHSA1,CYTIP,TMEM50A,ZNRF1,TBCB,IL26,POLR2G,ALDOC,PRELID1,GPR65,TM9SF1,TSEN54,ATP5G3,PSMA1,SCP2,SLC1A4,C10orf128,EIF4A3,ISG15,CDC37,RNASEK-C17orf49,CAPZB,RAP1A,UBE2K,MICAL1,PAXX,PSMB2,NUP62,FERMT3,CCDC107,LPIN2,ARNTL,COG1,UBE2N,LMAN2,CCT6A,PSMA4,UBE2A,HSH2D,GSDMD,DRAP1,MXD3,ENSA,PLSCR1,PLEKHB2,PDCL3,RNF167,ARHGEF39,LAIR1,CHN1,ARPC4,PGK1,ARPC1B,CRY1,RASSF5,ARHGEF12,CYCS,PRR5,EMC7,ECH1,COX8A,ACTR2,ARHGEF6,NME1,PPIF,MAPK1IP1L,MSC,HDAC1,SEPT2,COPB1,AP1B1,TMPRSS3,MCM6,PSMC4,OS9,CHP1,PPP1R18,RALGDS,RGS14,IVNS1ABP,CHMP4A,COPE,ACAA2,CCT7,STXBP2,WDR1
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C09-CXCL13_PMID_30479382,T cell,CXCL13,PDCD1,RBPJ,BHLHE40-AS1,NR3C1,BHLHE40,SAMSN1,ALOX5AP,CTSB,ID2,SNX9,MYO7A,RNF19A,HAVCR2,PDE7B,AHI1,CTSD,ZBED2,GZMB,ANXA5,LYST,RGS2,CCDC50,SARDH,ARL3,IGFLR1,SUSD6,TPI1,BST2,SRGN,SLA,CTSL,CBLB,RDH10,KIAA0319L,PAG1,MTHFD2,GEM,ZEB2,SYT11,SRGAP3,CCL3,TBXAS1,ITPR1,FUT8,TGIF1,DAPK2,YARS,RAB27A,CLIC5,GNG4,NPDC1,ATXN1,PSTPIP1,CLSTN3,CD2,TRAF5,PDIA6,SNAP47,CAMK1,CREG1,SIPA1L1,CYSLTR1,SEC11A,LY6E,ITGAE,SEL1L3,SLC27A2,PDE3B,RGS16,SLC7A5,KCNK5,PLPP1,TNFSF10,ATP8B4,ATP6V1C2,WARS,SOCS1,CD247,SMARCA2,SRI,MX1,LIMA1,FZD6,CKS2,MIR155HG,ACADVL,CORO1C,AGPAT5,PFKP,GALNT2,LAG3,MAPKAPK3,DBH-AS1,CPD,SLC4A5,FBXO10,RALA,OGG1,RILPL2,CCDC47,CD2BP2,CD109,IFI44L,NCALD,AGFG1,GOLPH3,PCNX2,PARP14,EIF6,INTS6L,GOLIM4,GMDS,PPM1M,SGK1,GFI1,SFXN3,100130093,GPR137B,LRRC8C,CD226,SLC1A5,ETHE1,CCT8,ASXL2,ETS1,S100PBP,SKIV2L2,SEM1,RIF1,NBN,ARL8B,CRIM1,PLPP5,KRT86,IRF7,JMJD4,ABCG1,CBFB,ACSL1,TARSL2,HBS1L,RALY,VEZT,FAM3C,MFSD10,SLA2,CD63,UNQ6494,AFAP1,ABHD2,D2HGDH,TSPAN17,CLEC2D,SUPT3H,MT2A,MOB1A,C9orf66,CLNS1A,SEC14L2,KIF21A,BLVRA,MT1A,WDR54,LMO4,PIGT,MYDGF,CCNI,BTAF1,P4HA1,PGGHG,NBL1,UBE2Z,KIAA1671,PARP9,STAMBP,KIF3A,MAD2L2,CLASP1,FAM96A,ZNFX1,QSOX1,IFITM3,DGKH,TMX4,CERS5,SEPT7,RAN,GNB1,LUC7L2,ARL6IP6,CD9,SACM1L,SUB1,CDK2AP2,MIR155,DCAF7,CIAO1,TMEM179B,C7orf55-LUC7L2
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C10-FOXP3_PMID_30479382,T cell,FCMR,IL10RA,SAMHD1,TTN,TMEM63A,CCM2,STK38,THEM4,TRAF3IP3,LIME1,RCSD1,RASA3,HAPLN3,ZGPAT,RNF214,EPB41,SELPLG,CSGALNACT1,CASP8,S1PR4,SNX20,SHMT2,TLDC2,FCRL3,NLRP1,PDP1,CCDC66,CNTRL,SLFN5,ISG20,TTC39C,EEF2,IKBKE,VSIR,REREP3,CARD10,CNST,ZNF101,CDC42SE1,IL24,FAM102A,WWP1,NAAA,TPP2,NSD3,TBC1D10C,UBL3,PYM1,EHD1,TRIM22,ZNF815P,R3HDM4,PFKL,EZH1,MAD1L1,VSIG1,ATP8B2,RNASEH2B,LINC00426,TMEM50B,PIH1D1,MED15,WASF2,CASP2,SGTB,FLOT2,NSUN6,TPR,MORC3,PCSK7,YPEL2,COQ8A,KIAA0040,DOCK11,EVL,SMC6,MKRN1,PARP12,FAM45BP,DCP1B,RAD21,ATXN7L3B,GPR155,ARGLU1,SMCHD1,STYX,ZNF37BP,SDCCAG8,MYH11,CAMK2G,CPNE2,MAPK13,SP110,OXLD1,AKAP2,221016,PLPBP,NMT2,TTN-AS1,MEI1,RSU1,POLR1D,TCP11L2,SLC39A10,EDEM3,PCMTD1,ZNF655,TMSB10,MAX,BRWD1,INPP5K,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C11-IL10_PMID_30479382,T cell,LGMN,UGP2,ADTRP,ZC2HC1A,CD28,MAF,CCR4,PBXIP1,IL1R1,PIM2,MYO5A,GPX1,ZC3H12D,PDE4B,FAS,PRDM1,MIR4435-2HG,IKZF3,UCP2,FOXP1,FAM46C,CD59,OGDH,METTL8,TLK1,SIRPG,MAST4,IL10,SPINT2,ANTXR2,PSAP,EPSTI1,FAM174B,IFNAR2,PMVK,MIAT,IDI1,ZBTB38,TRIB2,IPCEF1,NABP1,CCDC141,IRF4,LOC643733,SLC44A2,MAT2B,PTPN2,IL10RB,IFI16,SKAP1,LOC400927,NDUFV2,CCDC28A,TM9SF2,GRPEL2,INPP1,AFTPH,FRMD4A,RGL4,CD38,CASP4,SNX6,LBH,PEBP1,ADAM10,RGS6,SNX29,PARP1,TULP4,ATXN7L1,GLB1,TAB2,NBR1,FAM49B,BCAS2,ALDH9A1,TMEM2,ISCU,GPBP1L1,LINC01619,SLC7A8,PDIA4,TACC3,TNIP3,PCYOX1L,SDHA,SEPT6,SERINC3,IDI2-AS1,LINC00239,NPC1,LAMP2,SUMO1,ABTB1,PRG4,DDOST,PMF1,VAV3,BCL10,PHTF1,TNFRSF14,ANKRD12,HSDL2,HNRNPH2,PKP4,MAP3K5,DLGAP1-AS1,LPAR2,C1orf43,EXOSC1,ACTA2,HCLS1,CRLF3,MDH1,IST1,DBNL,STX16,TNFRSF13B,PPP1R12A,UBL7,TMEM140,SNX17,NDUFB5,LAPTM5,WDFY1,NDUFB8,SMIM29,COL4A3BP,PPME1,TRAFD1,HPS1,ATP6V0E1,UMAD1,PAIP2,CUTA,WDR98,CCAR1,SEC31B,TRAPPC4,UQCRC1,S1PR2,RETREG3,SKP1,PMF1-BGLAP,COX10,WSB2,N4BP2L2,CPSF2,HS3ST3B1,CTSS,CTBS,TMEM14B,CCNG1,REXO2,VPS26A,SHISA5,NME7,JAZF1,N4BP2L1,MARF1,CORO2A,PPM1K,UBE2D2,YWHAB,PIK3C3,ARHGAP9,PCBP3,ATP6V0E2,MLF2,LCK,CSTF1,PRKACB,KDM2A,CSTB,RAB11FIP4,TUBD1,SMAP1,SNX2,GLRX3,MBNL1,DNAJC8,CCPG1,RBM38,VWA5A,NDUFA4,YEATS4,HSPA9,RFFL,JMY,RBBP5,DNAAF4-CCPG1,RTCA,CEBPG,ABHD3,CHFR,NUP98,C1orf131,CDKN2A,NECAP1,AP1M1
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer,30479382,CD4_C12-CTLA4_PMID_30479382,T cell,CCR8,IL2RA,TNFRSF18,FOXP3,TNFRSF4,CTLA4,BATF,TNFRSF9,DUSP4,LAYN,ICOS,TIGIT,PMAIP1,IKZF2,IL1R2,PHLDA1,TNFRSF1B,STAM,RGS1,NAMPT,SAT1,ENTPD1,RTKN2,IL12RB2,GK,CTSC,VDR,ACP5,SLAMF1,F5,CREM,PELI1,SDC4,SYNGR2,IL21R,IL2RB,TYMP,HTATIP2,ARID5B,FAM129A,LY75,GBP2,GLRX,PHTF2,CD79B,RHBDD2,BIRC3,TFRC,GBP5,DNPH1,CD58,CARD16,MIR4632,LAIR2,GADD45A,BTG3,CD27,RHOC,HSPA1A,SPOCK2,IL21R-AS1,TPP1,GALM,SH2D2A,APLP2,DUSP16,CORO1B,CD27-AS1,NEDD9,LAPTM4B,SLC16A1,TRAF1,LY75-CD302,ZBTB32,TMEM173,DUSP10,PTTG1,HLA-DRB1,IL18R1,RAB11FIP1,CCDC22,SERPINB9,CD83,NCF4,TRAF3,ENTPD1-AS1,SLC35F2,NCOA3,FRMD4B,GCNT1,SEC14L1,PIM3,ACOT9,SCO2,CACYBP,HLA-DRB6,HSPA1B,CRADD,CASP1,HSPA1L,CCND2,ERI1,ANKRD10,PKM,NDFIP2,DDIT4,NINJ1,CTNNB1,HERPUD1,PRNP,NFAT5,FANK1,TMEM154,KDM5B,AKIRIN2,GRSF1,OAS1,LMNA,ZC3H7A,KCNN4,CEACAM1,CREB3L2,PPM1G,OTUD5,IKZF4,IFI6,RHOG,SQSTM1,MAP2K3,PBX4,P2RY10,CLEC7A,FKBP1A,CADM1,CD177,PARK7,TNIP1,TBC1D8,GATA3,BACH1,S100A4,VCP,HLA-DQA1,CXCR3,ARPP19,ZNF292,SDF4,HLA-DMA,ENO1,PTPN7,ADAT2,ACSL4,GBP4,NOP58,UXS1,HSPB1,MALT1,CD274,PTPRJ,PRDX1,TET2,BCL2L1,CFLAR,ZC3H12A,WSB1,PTP4A3,ELOVL5,SLC5A3,STAT3,TXN,LTA,EBI3,TSPAN5,ETV7,MAP1LC3A,3-Mar,LGALS1,JPT1,ATP13A3,FAM53B,MRNIP,KAT2B,PRKAR1A,SOX4,YWHAE,PDE4A,SPPL2A,FOXO1,CD7,IQGAP1,C3AR1,ZFAND5,CD80,PAK2,MICAL2,CTNNA1,DDHD1,LAPTM4A,PPA1,TNIP2
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,macrophage/CD163+CD204+_PMID_34038734,Macrophage,CD14,CD163,FCGR3A,MSR1,CXCL12,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,macrophage/NR1H2+_PMID_34038734,Macrophage,NR1H2,MRC1,FLT3,IRF4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,macrophage/NR1H2+IRF8+_PMID_34038734,Macrophage,NR1H2,IRF8,FLT3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,macrophage/CD274+_PMID_34038734,Macrophage,CCR7,CD274,FLT3,TNF,IRF4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,macrophage/CD163+CD204+_PMID_34038734,Macrophage,FCGR3A,CD163,CD14,CXCL12,MSR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,macrophage/NR1H2+_PMID_34038734,Macrophage,FLT3,NR1H2,CCR7,IRF8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,T cell/CD8+Trm_PMID_34038734,T cell,CCL4,NKG7,GZMA,CD8A,GZMB,PRF1,HAVCR2,LAG3,IFNG,TOX,CCL3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,T cell/CD4+FOXP3+_PMID_34038734,T cell,CTLA4,BATF,TNFRSF4,IL2RA,FOXP3,PIM2,TOX,RTKN2,TNFRSF18,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,T cell/CD4+IL7R+_PMID_34038734,T cell,IL7R,PLAC8,FOS,DUSP1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,T cell/CD4+GNLY+_PMID_34038734,T cell,GNLY,KLRC1,GZMA,NKG7,TNFRSF18,CD69,PRF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,T cell/CD8+Trm_PMID_34038734,T cell,NKG7,PRF1,GZMA,GZMB,CCL4,GNLY,IFNG,CD8A,KLRC1,CCL3,CD69,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,T cell/CD4+FOXP3+_PMID_34038734,T cell,IL2RA,CTLA4,BATF,FOXP3,RTKN2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,T cell/CD4+IL7R+_PMID_34038734,T cell,IL7R,PLAC8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,B cell/Naive_PMID_34038734,B cell,HLA.DRA,HLA.DPA1,HLA.DQA1,IL6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,B cell/CD38+_PMID_34038734,B cell,PRDM1,CD38,SDC1,MKI67,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,B cell/SDC1+PC_PMID_34038734,B cell,CD38,SDC1,PRDM1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Characterizing the tumor microenvironment of metastatic ovarian cancer by single-cell transcriptomics,34038734,B cell/Plasmablasts_PMID_34038734,B cell,MKI67,PRDM1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,NK-cell/NK_FGFBP2_PMID_34238352,NK cell,KLRF1,FGFBP2,FCGR3A,SPON2,CLIC3,GNLY,GZMB,NKG7,TYROBP,PRF1,KLRD1,FCER1G,PLAC8,ADGRG1,CMC1,S1PR5,AKR1C3,CCL4,CTSW,CX3CR1,FGR,PLEK,CCL3,TTC38,AREG,CST7,GSAP,CD7,MYOM2,CYBA,ITGB2,HIPK2,PTPN12,KLRB1,HSH2D,PRSS23,OSBPL5,CCL4L2,IER2,GPR65,SH2D1B,CTBP2,RHOBTB3,MLC1,TRDC,MAFF,TPST2,HOPX,CD300A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,NK-cell/NK_XCL1_PMID_34238352,NK cell,KRT81,TRDC,TMIGD2,KRT86,TNFRSF18,ADGRG3,KLRC1,KIR2DL4,CXXC5,FCER1G,LINC00996,SRGAP3,SH2D1B,TYROBP,SOST,SPRY1,ITGA1,RGS16,CLNK,XCL1,DENND6B,CAPG,IL2RB,LAT2,PCDH9,TEX30,TNFSF13B,ZNF683,IFITM10,CD38,GSTP1,IGKC,H3F3A,AKAP5,SLC16A3,XCL2,FAM166B,KIAA0125,KLRC2,AREG,LIF,WIPF3,IGHG3,MPST,AFAP1L2,IGLC3,NCR3,HAVCR2,NPW,LDB2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,T-cell/TC_CD4_FOXP3_PMID_34238352,T cell,FOXP3,IL1R2,AC017002.1,TBC1D4,LAYN,DUSP4,IL2RA,CTLA4,AC133644.2,AC145110.1,ICA1,PVALB,PTP4A3,F5,TNFRSF4,TNFRSF9,DNPH1,TRAF3,HACD1,LMCD1,GADD45A,POU2F2,ACP5,LAIR2,CORO1B,ASB2,BATF,WFDC2,CD27,CLEC7A,ZBED2,NCF4,OTUD7B,PTTG1,ETV7,NINJ2,CD4,IKZF4,ACTG2,ENTPD1,RTKN2,TRAF1,TNFRSF18,AC147651.4,SIRPG,CD79B,TRAC,VDR,CRADD,IL6R,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,T-cell/TC_CD4_GZMA_PMID_34238352,T cell,IL7R,CCR7,CD40LG,GPR183,TPT1,ZNF90,MAL,SERINC5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,T-cell/TC_CD8_CX3CR1_PMID_34238352,T cell,FGFBP2,GZMH,NKG7,ENC1,S1PR5,PRF1,CST7,KLRG1,KLRD1,FCGR3A,GNLY,HLA-C,PLAC8,PLEK,KLRF1,CCL4,CMC1,CX3CR1,ZEB2,PATL2,C1orf21,CD8B,GZMM,TTC16,ADRB2,PYHIN1,LITAF,CTSW,BTN3A1,LYAR,PRSS23,DDX5,ITGB2,GLTSCR2,GK5,TRGC2,HLA-E,FGR,CD8A,CHI3L2,BPGM,VNN2,ABHD17A,MBP,C11orf21,TRG-AS1,UBALD1,TBX21,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,Myeloid cell and Mast cell/M_CCL18_PMID_34238352,Mast cell,C1QA,C1QC,C1QB,PLTP,FTL,APOE,DAB2,A2M,GPNMB,APOC1,MARCKS,RGS1,CTSB,VSIG4,LGMN,CD74,NPC2,CTSD,CTSL,RNASE1,SLCO2B1,CD81,MSR1,HLA-DPA1,HEXA,GLUL,LIPA,PSAP,MAF,SEPP1,CD63,NUPR1,CREG1,HLA-DMB,GPR34,HLA-DQA1,TREM2,HLA-DPB1,HLA-DQB1,CD68,FOLR2,MS4A4A,AKR1B1,LAIR1,CTSC,C2,SDC3,HLA-DMA,FCGR3A,FCGR2A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,Myeloid cell and Mast cell/M_CCR2_PMID_34238352,Mast cell,PFN1,PKM,CST6,S100A10,ENO1,NME1,CLEC5A,HMGA1,C15orf48,ADAM19,YWHAH,SLC39A8,KCNN4,FAM129B,SLC16A3,LDHA,MARCKSL1,SDF2L1,EFHD2,H3F3A,PPIA,RANBP1,OLR1,PGAM1,SH3BGRL3,CFL1,SNRPG,PPA1,CALR,FPR3,SRM,SPP1,CCL2,MTDH,PDCD5,IL7R,NHP2,SERBP1,IL4I1,PKIB,TYMP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,Myeloid cell and Mast cell/M_CD14_PMID_34238352,Monocyte,S100A12,FCN1,VCAN,LYZ,RP11-1143G9.4,THBS1,S100A8,CSTA,S100A9,S100A4,CFP,MNDA,S100A6,CLEC4E,CTSS,PABPC1,FOS,C14orf2,FAM65B,AP1S2,CD55,IL1R2,TKT,HMGB2,CALM2,RGS2,MEGF9,JAML,PFDN5,SELL,C10orf54,DUSP1,MGST1,RP6-159A1.4,ANXA1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,Myeloid cell and Mast cell/M_CD16_PMID_34238352,Mast cell,LILRA5,PLAC8,LILRA1,CDKN1C,LINC01272,LST1,CFP,FAM65B,SPN,CD52,IFITM2,COTL1,VNN1,FCN1,SERPINA1,GPBAR1,ARL4A,CDH23,CORO1A,AIF1,RAB37,TCF7L2,ICAM3,FCGR3A,C10orf54,CD48,MYO1G,CTSS,FPR2,NAP1L1,C11orf21,STK17B,LIMD2,SYTL1,DUSP1,SAT1,CD79B,FGR,RHOB,LILRB2,FCER1G,APOBEC3A,CYTIP,TESC,CYFIP2,BCL2A1,PTPRC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,Myeloid cell and Mast cell/M_CPA3_PMID_34238352,Mast cell,HDC,TPSD1,KIT,RP11-354E11.2,CPA3,GATA2,IL1RL1,SLC18A2,CDK15,RAB27B,AC004791.2,SLC38A11,RGS13,ST8SIA6,NTRK1,KCNH2,GRAP2,CALB2,HPGD,IL9R,CTSG,RP11-557H15.4,MAOB,EIF2B5-AS1,RP5-1125N11.2,CTC-510F12.2,AQP10,RP4-680D5.9,RP11-586D19.1,GRIA3,PLA2G1B,RP11-40E6.2,DMRT2,AC008753.6,SVOPL,UTS2,ASIC4,CADPS,GFI1B,LAX1,TMEM246,TPSAB1,TPSB2,TESPA1,ANKDD1B,CACNA2D2,BACE2,ENPP3,SLC45A3,LINC00996,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,Myeloid cell and Mast cell/M_MMP9_PMID_34238352,Mast cell,TM4SF19,AK5,SIGLEC15,DCSTAMP,ATP6V0D2,SPOCD1,AKAP6,MATK,SLC9B2,CHIT1,MAP1A,FABP4,DGKI,ITGA2,LPL,GPC4,ACP5,FAIM,MMP9,DHRS9,ITGA3,CD109,DPP4,CTSK,MMP7,HSD3B7,PLD3,FCMR,ITGB5,SDC2,GAL,MMP19,SPARC,CHI3L1,MYO1D,CSTB,CD68,C9orf16,RAB7B,F2R,TIMP3,EMP1,EXT1,ARHGAP10,ANPEP,CD63,LXN,LAT,ATP1B1,CTSD,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,B cell/BC_GPR183_PMID_34238352,B cell,MS4A1,LTB,BANK1,SELL,1-Mar,CD52,HLA-DRB1,LINC00926,LAPTM5,FCMR,HLA-DQB1,CCR7,FAM65B,HLA-DRB5,RP11-693J15.5,HLA-DRA,BTG1,CD37,HLA-DQB2,HLA-DQA1,CD74,IRF8,SCIMP,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,B cell/BC_IGHG1_PRDM1_PMID_34238352,B cell,MZB1,SSR4,XBP1,PRDX4,FKBP11,SEC11C,IGHG3,DERL3,FKBP2,IGHG1,IGHG4,IGHG2,IGHGP,MANF,SSR3,ERLEC1,SPCS3,ITM2C,SELM,IGKC,SDF2L1,JCHAIN,JSRP1,HSP90B1,LMAN1,TXNDC15,SPCS1,SEL1L,TRAM1,GSTP1,KDELR2,CD63,FAM46C,RRBP1,NUCB2,MYDGF,RPN2,PRDM1,CRELD2,SELK,KDELR1,SDC1,VKORC1,VIMP,CD59,CREB3L2,DNAJC1,PDIA6,DNAJB9,TNFRSF17,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,Dendritic cell/DC_CD207_PMID_34238352,Dendritic cell,FCGBP,CD1A,HPGDS,PPM1N,PLEK2,S100B,MMP9,CAPG,C15orf48,CA2,RXRA,CAMK1,ALOX5AP,C1QC,SLC16A3,LGALS1,CD9,NDRG2,PKM,CKLF,PRDX1,VASP,GPR84,TPI1,PDLIM7,C1QB,PLAU,ALDOA,ABI3,PFN1,RHOH,TACSTD2,C1QA,STK17A,CD207,SIRPA,AIF1,SLC12A5,NUDT14,CALM3,MIF,TNFRSF9,S100A11,MMP14,SEMA4C,RUNX3,SUSD3,RP11-556E13.1,CLEC5A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,Dendritic cell/DC_CLEC9A_PMID_34238352,Dendritic cell,CLEC9A,RAB7B,XCR1,CLNK,FBXO27,PLCD1,WDFY4,HLA-DOB,SHTN1,IDO1,DNASE1L3,ASB2,LGALS2,CPNE3,APOL3,BATF3,BTLA,CADM1,AIM2,RGCC,NAAA,TMEM14A,C1orf54,IRF8,CPVL,TACSTD2,GNAO1,TOX,VAC14,DGAT2,SNX3,ANPEP,SHISA4,SLC24A4,ICAM3,SYTL1,CD74,SLAMF7,LACC1,LSP1,SNX22,S100A10,TMSB4X,CST3,EGLN3,VAV3,APOL1,HLA-B,PPT1,ACTG1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,Dendritic cell/DC_CLEC10A_PMID_34238352,Dendritic cell,LYZ,CLEC10A,FTH1,SRGN,MCL1,VSIG4,RGS2,HLA-DRA,KLF4,AREG,BTG1,FCGR2B,DUSP1,MS4A7,RP11-1143G9.4,NLRP3,HLA-DRB1,HLA-DQA1,IL13RA1,CSTA,CREM,ZFAND5,GLUL,CD163,HLA-DPB1,JUNB,SAMSN1,MT2A,HLA-DQB1,PNRC1,IFITM3,RHOB,SMAP2,SAT1,EIF1,CFP,PKP2,HCST,CXCL16,FCER1A,MRC1,C1orf162,CLEC4E,FCN1,HLA-DPA1,HLA-DRB5,REL,CEBPD,HLA-DMA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
High-grade serous tubo-ovarian cancer refined with single-cell RNA sequencing specific cell subtypes influence survival and determine molecular subtype classification,34238352,Dendritic cell/DC_LILRA4_PMID_34238352,Dendritic cell,LILRA4,PTCRA,LRRC26,JCHAIN,SMPD3,LAMP5,MZB1,DERL3,SCT,MAP1A,GZMB,CLIC3,IL3RA,SMIM5,PPP1R14B,CLEC4C,FAM129C,LINC00996,SLA2,TCL1A,SLC44A2,PTPRS,ZFAT,RP11-117D22.2,CXCR3,C1orf186,PACSIN1,SCAMP5,C12orf75,ITM2C,UGCG,TSPAN13,MYBL2,SLC15A4,IGHM,RP11-73G16.2,BCL11A,NEK8,KIAA0125,IRF7,IGKC,TRAF4,TCF4,PLAC8,BLNK,PMEPA1,SHD,TMIGD2,GPM6B,CYB561A3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_bcells_Plasma cells_PMID_35803246,B cell,IGHV1-69D,IGKV3-11,IGKV3-20,IGHG1,IGLV3-1,IGHG3,IGKC,IGKV4-1,IGLC1,JCHAIN,XBP1,MZB1,IGHGP,SSR4,FKBP11,IGHV1-69,IGLC2,IGHG4,PRDX4,ANKRD28,FNDC3B,DERL3,IGHG2,SEC11C,CYTOR,PRDM1,TXNDC5,TEX14,PIM2,TXNDC11,CITED2,FKBP2,JUN,CD38,ACOXL,LINC00910,OSBPL3,SDF2L1,HSP90B1,EHMT1,NEAT1,TENT5C,IFNG-AS1,CEP128,SSR3,HM13,FNDC3A,ELL2,HERPUD1,SPAG4,SDC1,LMAN1,ERLEC1,MYDGF,CREB3L2,LINC02362,TRIB1,EIF2AK3,PDK1,TNFRSF17,HSPA5,AC012236.1,IGHA1,FBXW7,CPEB4,HDLBP,SPCS2,ITGA6,ZBP1,SPCS3,JSRP1,GLCCI1,ATXN1,IGHJ6,KDELR2,SEL1L,TPST2,TXNDC15,PLPP5,PPIB,MAN1A1,MANF,CRELD2,AC007569.1,IGKV3D-20,CROCC,DNAJC1,MIR4435-2HG,RGS1,KDELR1,CHPF,GSTP1,DPEP1,DNAJB9,SELENOS,MEI1,LINC01484,RABAC1,PRPSAP2,AC008014.1,PDIA4,BCL2L11,CADM1,Z93241.1,BTG2,CD59,ST6GAL1,SEC14L1,RRBP1,NSMCE2,H1FX,HMCES,SELENOK,ARSA,CD63,RAB30,TSHR,MYO1D,NUCB2,SIL1,SPATS2,HIST1H2BC,NEDD9,SLAMF7,TMEM258,MIATNB,PTCH2,SEC24D,PLD3,AC078883.1,AQP3,SLC44A1,RPN1,MEF2B,AC239799.2,SEC24A,ALG5,UAP1,RPN2,TECR,NFKBIA,CAV1,DERL1,FAM92B,ARF4,MBNL2,CCPG1,MANEA,SELENOM,PIM1,TNFAIP3,P2RX1,IGLJ1,SAR1B,KCNN3,LMAN2,ESR1,GALNT2,PDXK,HIST1H1C,IGF1,FAM174A,NANS,C11orf80,LINC02384,GMPPB,SRPRB,BSCL2,GAB1,SMPDL3B,TMED10,MSI2,ERN1,PDIA6,CLPTM1L,SEC61A1,ICAM2,LAX1,PELI1,ALDH1L2,TMEM59,CLIC4,HSD17B8,CASP3,TMEM107,PYCR1,GMDS,MCEE,AC007384.1,ANKRD37,ADAMTSL4-AS1,LINC02576,RAPGEF1,WIPI1,CALU,SCNN1B,B9D1,TMEM208,PIK3CG,SRM
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_bcells_Doublets_PMID_35803246,B cell,PTGDS,GZMB,CST3,TYROBP,LILRA4,IRF7,CLIC3,SERPINF1,TXN,PPP1R14B,RASD1,PLAC8,PLD4,GPR183,AREG,NPC2,IL3RA,ALOX5AP,FCER1G,CTSB,CXCR3,C12orf75,S100A6,TSPAN13,MS4A6A,TCL1A,UGCG,APP,LRRC26,SOX4,CTSC,IRF8,IRF4,SMPD3,LILRB4,SCT,SEC61B,CD68,LAMP5,TCF4,ITM2C,TPM2,CLEC4C,HIGD1A,CD4,STMN1,RNF130,RHEX,ZFAT,PAXX,AC007381.1,SAMHD1,VAMP8,SRGN,FCHSD2,PTCRA,SMIM3,MAP1A,MPEG1,PTPRS,GRN,CCDC88A,PTPRE,CLN8,SELPLG,CCDC50,LDLRAD4,ARL4C,NR4A3,CERS6,SLC15A4,P2RY14,JAML,PARK7,BCL11A,CYB561A3,FUT7,RUNX2,TGFBI,P2RY6,GAS6,PLEK,CD2AP,PPP1R14A,RNASE6,IRF2BP2,LINC00996,MAPKAPK2,SULF2,IFI44L,ZFP36,PLP2,SLC20A1,TNFRSF21,FYB1,IDH3A,SPIB,MGST2,DNASE1L3,RGS2,MYBL2,TNFSF13,BST2,FAM160A1,LGMN,DSTN,SLC7A5,RNF149,SRP14,TRAF4,SIDT1,DBI,TNFSF13B,POLB,GABARAP,LINC01374,DUSP5,RAC1,PLAAT3,SMIM5,IGF2R,SUSD1,CORO1C,ALDH2,GLUL,LAP3,PACSIN1,UCP2,EGLN3,INPP4A,RNASET2,SPCS1,GRAMD1B,SNHG29,AC023590.1,S100A11,GNA15,COMMD6,ERN1,OTULINL,KRT5,NRP1,GPR65,DRD4,LINC02812,NR3C1,TAGLN2,COL24A1,GAPT,TSPYL2,FERMT3,SEC61G,TBC1D8,SLC25A5,MYL12A,CUX2,SCAMP5,ABRACL,TUBA1B,PHEX,ETV6,PHB,CSF2RB,CD164,LINC01478,MOB1B,RUBCN,PSAP,FTH1,CAT,H2AFY,GSN,HSP90AA1,SELENOS,SNHG5,CD36,DDIT4,CNPY3,SHD,MAN2B1,EPHB1,KLF4,PBX3,IGFLR1,LIME1,CYBB,BHLHE40,ATP5F1E,N4BP2L1,COMT,HINT1,THEMIS2,NUCB2,PYCARD,AKAP13,VIM,VEGFB,ZDHHC17,OGT,FEZ2
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_bcells_Activated B cells_PMID_35803246,B cell,MS4A1,CD52,BANK1,HLA-DRA,BTG1,CD37,CD69,HLA-DPB1,HLA-DRB5,COTL1,LAPTM5,HLA-DPA1,LIMD2,TMSB4X,ARHGDIB,CD48,FCMR,PTPRCAP,HLA-DQA1,KLF2,HLA-DRB1,LTB,HLA-DQB1,BLK,CD74,ZFP36L1,ACTG1,VPREB3,CORO1A,HLA-A,PTPRC,DUSP2,LINC01781,SCIMP,CD83,CD53,CD79B,HLA-E,POU2F2,SMIM14,PPDPF,RAC2,CIB1,FCRLA,PTPN6,TXNIP,CTSH,LINC00926,CD82,ARHGAP24,EVL,RIPOR2,CD19,CRIP1,JUNB,GAS5,CD79A,P2RX5,SYPL1,ADAM28,LY86,HOPX,LBH,44621,SP140,PFN1,PTMA,IFI30,STK17A,SH3BGRL3,MTSS1,YWHAZ,NR4A2,EZR,ACP5,RCSD1,SNX2,CLIC1,COPDA1,PNRC1,SWAP70,FAU,ATP2B1,POLD4,CD24,APOO,SLC2A3,SEPTIN7,HSP90AB1,ARPC1B,CFL1,SYNGR2,TSC22D3,RACK1,UBA52,ARPC3,MSN,TNFRSF13B,LAT2,PFDN5,BCL2A1,LCP1,EVI2B,DUSP1,CXCR4,ZFAS1,RESF1,IFITM2,GPSM3,TMSB10,BACH2,SP100,NOP53,FCRL1,HVCN1,EEF2,ARL6IP5,CD40,TPM3,PSMB9,PDLIM1,CCND3,CSK,TNFAIP8,FXYD5,PARP15,AIM2,NPM1,ANKRD44,TOMM7,EBF1,CD44,CAPG,CCR7,PABPC1,CD86,PKM,MBNL1,IFT57,CEMIP2,ACTR3,CNN2,HLA-DMA,UBE2N,TRAF3IP3,SMCHD1,MEF2C,HLA-DOB,BTF3,PKIG,ARPC2,PRDM2,SF1,SMAP2,IFITM1,HLA-DMB,FUS,EIF2S3,RBFOX2,LSP1,SP110,ANXA6,BCAS4,ARID5B,VASP,STAG3,INPP5D,CD22,ITGB1,REL,HNRNPDL,PPP1R18,TRIR,HCLS1,RALGPS2,DAZAP2,CALM2,TNFRSF13C,EIF3H,PAX5,TBC1D10C,TRBC2,CAPZB,HLA-B,PRR13,CALM1,AFF3,SIPA1L1,KLF6,ELOVL5,LINC02397,IKZF3,CD96,LY6E,LSM7,ARHGAP25,WSB1,YWHAB,CDC42,SEPTIN6
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_bcells_Na√Øve B cells_PMID_35803246,B cell,CD69,BACH2,BTG1,TCL1A,TXNIP,STAG3,CD83,YBX3,CEMIP2,ZFP36L2,KLF2,SLC2A3,AFF3,RCSD1,CD37,ZBTB16,ARRDC2,P2RX5,DUSP1,IL4R,CD79B,SSH2,LAPTM5,FCMR,NOP53,FOXP1,PIK3IP1,CAMK2D,CD55,COL19A1,NIBAN3,SMCHD1,PLEKHG1,FOS,CGGBP1,JUNB,ZNF318,ELOVL5,HVCN1,CALHM6,SNX2,ZNF331,RBM38,FCRL1,CXCR4,FBL,AC119396.1,EPB41L4A-AS1,FCER2,CD72,LINC00926,NR4A2,SNHG7,LINC02397,SARAF,JAK1,CXCR5,NR4A1,IGHD,PTMA,LBH,PHTF2,SP140L,RALGPS2,CD79A,SNHG25,PAX5,PLEKHA2,FAM177B,CHPT1,BIRC3,TMEM131L,REL,BTG2,ZFP36L1,GUCD1,DDIT4,GGNBP2,LYN,APOO,RACK1,IER2,LSM14A,GDI2,GNAS,TAGAP,BCAS2,MPLKIP,MED4,MED6,CNBP,CD52,ZBTB10,C9orf72,STK17A,PNN,SP100,RSRP1,SNHG6,CNST,ORMDL1,DUSP2,SESN1,RHOH,TAF1D,PNRC1,ST3GAL1,LBR,STK17B,CIRBP,ELF2,TNRC6B,SCAPER,WASHC4,TNFAIP8,TRIM56,CD19,GMFG,EIF3E,MTPN,CD200,PCF11,STAG2,FKBP5,CCDC130,EGLN2,SERBP1,BTLA,GABPB1-AS1,NCK2,MAP3K8,NR1H2,PRRC2C,HLA-DRB5,HIST1H1C,RAB7A,CCR7,SHISAL2A,WTAP,CD24,TNFRSF13C,NCL,SNU13,PKN2,MAML2,PEAK1,ANKRD44,ITGA4,ORAI2,ACAP2,CCDC12,EIF1,VAV3,SHISA5,FLOT2,HNRNPK,CSNK1G3,HNRNPH3,PFDN5,MARCKSL1,FUS,NUMB,KMT2E,CLTA,LTA4H,WIPI2,NSD3,CLEC17A,AC004687.1,DIDO1,LIMD2,SRSF11,FAU,EEF2,MAF1,TMEM154,PNISR,ANAPC16,RSL1D1,PABPC1,ZNF800,RBBP6,GPBP1,PPIG,SNN,CYB5R3,PAPOLA,STAT3,OTUD6B-AS1,HMGN2,RASA2,HIP1R,BSDC1,CDC42SE1,SLC38A1,NSA2,UBXN1,PPP1CC,GLO1,PDE4B
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_myeloid_Cycling cells_PMID_35803246,Monocyte,STMN1,HIST1H4C,H2AFZ,MKI67,UBE2C,HMGN2,HMGB2,TOP2A,PTTG1,CENPF,TUBA1B,TYMS,PCLAF,CDK1,RRM2,HMGB1,NUSAP1,TK1,BIRC5,CKS1B,CKS2,TPX2,KPNA2,H2AFV,NUCKS1,DEK,H2AFX,ARL6IP1,CDC20,PCNA,GTSE1,TUBA1C,PRC1,SMC4,HMMR,MCM7,CCNB1,CDKN3,CENPU,ASPM,TMEM106C,CENPM,RPA3,DUT,CENPW,RAD51AP1,CEP55,TROAP,DTYMK,DIAPH3,HMGB3,CENPE,CLSPN,UHRF1,TMPO,CENPX,ZWINT,PARP1,SMC2,ANLN,CCNB2,PLK1,RAN,CENPP,ANAPC11,TACC3,ATAD2,CKAP2,LMNB1,LSM4,KIF11,AURKB,NASP,CALM3,ANP32B,SIVA1,DNMT1,KNL1,RAD21,PTMA,KIF20B,CCNA2,DHFR,UBE2S,MCM5,MZT2B,CARHSP1,CENPK,NSD2,RANBP1,CIT,CKAP5,NCAPD2,PHF19,LSM5,IDH2,CCDC200,COX8A,SKA2,JPT1,TCF19,FOXM1,SNRPG,NCAPH,FAM111A,HNRNPAB,KIF22,ANP32E,DLGAP5,KIFC1,HELLS,CDCA3,HIST1H1E,SGO2,PKMYT1,PPIA,CDKN2C,SHCBP1,MYBL2,NCAPG,STAB1,MCM4,SNRNP25,SNRPD1,ASF1B,HIST1H1D,MCM6,RRM1,APOBEC3B,MCM3,NUDT1,MELK,FEN1,GMNN,UBE2T,KIF2C,AURKA,DDX39A,UQCRQ,UQCC2,NUF2,CDCA8,SMC1A,RACGAP1,NME4,RHEB,USP1,BRCA1,EZH2,TIMM10,MAD2L1,CENPN,HP1BP3,NCAPG2,NDC80,LYVE1,SNRPB,AP2S1,GGH,NRP1,BANF1,CKAP2L,CCDC18,BRIP1,CALM2,PRKDC,FANCI,DTL,CDC25B,DNAJC9,BRCA2,GINS2,KIF4A,KIF14,BUB3,RBBP7,PSMC3,CDT1,PTMS,TMEM160,KPNB1,LGALS1,POLQ,AURKAIP1,PA2G4,LINC01572,SLC25A5,LSM3,BARD1,PRR11,FAM111B,HNRNPA2B1,CENPA,DAB2,SAE1,HERC5,E2F1,KIF15,LIG1,XPO1
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_myeloid_cDC1_PMID_35803246,Dendritic cell,IDO1,CST3,DNASE1L3,CLEC9A,CPVL,SNX3,IRF8,CPNE3,WDFY4,CCSER1,CLNK,TXN,C1orf54,LGALS2,LSP1,NAAA,S100B,HLA-DQB1,RAB7B,HDAC9,HLA-DQA1,TACSTD2,XCR1,FLT3,NET1,HLA-DPB1,ASB2,HLA-DPA1,CCND1,RGCC,GSTP1,TAP1,CD74,PPA1,TAGLN2,CADM1,ACTG1,CNN2,HLA-DRB5,ID2,CAMK2D,HLA-DRA,HLA-DRB1,MPEG1,P2RY14,SLAMF7,HLA-DOB,CKLF,NAP1L1,PPT1,TMEM14A,TAP2,SHTN1,ANPEP,SERPINF2,UCP2,WARS,DENND1B,LIMD2,PSMB9,DUSP4,VAC14,CYB5R3,C1orf21,PLPP1,TMSB4X,CST7,LCP1,BTLA,SELPLG,RGS10,RUBCNL,CSRP1,ZNF366,FGL2,SUB1,RAB32,GCSAM,COTL1,AUTS2,EIF3L,CDK2AP2,BATF3,CCDC126,LSM6,DUSP2,ISG20,DBN1,SPINT2,SERPINB1,TOX,LRRK2,NUBPL,ATG3,ETV6,SEPTIN6,KCNK6,CALCRL,ICAM3,VIM,CD48,HLA-B,MZT2A,AIM2,DAPP1,SERPINB9,C20orf27,EGLN3,PABPC1,SNX22,CRIP1,NCALD,CLIC2,CCDC6,NAV1,IL16,CRYBG1,ITGB2-AS1,PSME2,FLOT2,ACTR3,HSH2D,ENSA,BIRC3,P2RY6,PAK1,PLCD1,SRP19,ARPC2,MYCL,AC004448.2,ITGB7,SLAMF8,MYD88,RAB29,SMCO4,SLC1A5,SNHG5,SLC24A4,TRERF1,HPS5,S100A10,GDI2,C12orf45,RHOF,BCL2L14,LRRCC1,BASP1,HMGA1,ASAP1,C1QBP,ACTN1,AC004687.1,TUBA1A,CIITA,G3BP2,SULF2,NEGR1,DNAJC4,BID,MCOLN2,PSMA6,ROBO1,UBL7,HSPA8,TLR10,IDH3A,ADAM19,MIR924HG,ARF6,CD226,AC099560.1,CD40,RNH1,UNC119,PTMA,TAPBP,ANXA6,TSPAN13,VAV3,MYL12A,SRI,GPR31,RAB11FIP1,SEPHS2,CXCL9,MAP3K13,PSME1,LY75,SLC25A6,ELOVL5,REPIN1,FNBP1,PTK2,PIK3CB,PRCP,VMO1,NDRG2,DIPK2A,COX5A
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_myeloid_Microglia_PMID_35803246,Macrophage,C3,CCL4,CCL4L2,SERPINE1,APOC2,CH25H,SPP1,PDK4,CCL3,HTRA1,CCL3L1,ST6GAL1,FRMD4A,SCIN,TNF,IPCEF1,OLR1,LDLRAD4,OLFML3,SLC1A3,SLC2A5,DLEU1,ARHGAP24,MYO1E,DOCK4,USP53,SPTLC2,TREM2,BTG2,KLF2,MEF2C,FCGBP,RHOB,SORCS1,ARID5B,PLXDC2,ELL2,B3GNT5,BIN1,EGR2,EPB41L2,TMIGD3,LPCAT2,P2RY12,ELMO1,NAV3,EGR1,NR4A3,LNCAROD,SERPINF1,KCNQ3,HAVCR2,LINC01480,GLDN,CCDC26,SRGAP2,IL6ST,JUN,AL078590.2,FCGR1A,CDC14B,SRGAP2B,NHSL1,KLF6,SGK1,EGR3,OTUD1,HAMP,NEDD9,CSGALNACT1,SOCS6,A2M,SDK1,CHST11,PLTP,ADAM28,BHLHE41,RTTN,PLA2G4A,SYNDIG1,PDE3B,CX3CR1,GPR34,44623,PLD4,CCNH,LHFPL2,AC044893.1,CELF2,MSR1,CITED2,FHIT,CD83,NCKAP5,PALD1,BNC2,IER2,B4GALT1,SRGAP2C,PRKCH,SORL1,CTTNBP2,LPAR5,NR4A2,AKAP13,LINC02798,CPM,FGD4,SAMSN1,PELI1,VSIG4,FCHSD2,ARHGAP6,TNFAIP8L3,SLC11A1,ALOX5AP,NFKBID,FMNL2,BMP2K,ABCC4,NCK2,SFMBT2,SRGAP1,PEAK1,IER3,PADI2,PANX1,SPRY1,GSTM2,CPEB4,RUNX1,MERTK,TEX14,SLC9A9,FOXN3,QKI,PIK3R1,RASSF4,NLRP3,MTSS1,CD86,DHRS7,PSME4,NR4A1,RGS1,SPATA13,IL18,FPR1,MEF2A,DAGLB,REL,ZFP36L1,SNX9,SKIL,GNG7,LINC02642,CYFIP1,PDPN,TMEM119,DISP1,ID2,DST,IFI44L,SH3RF3,LRMDA,TMEM163,TGFBR1,TUT7,RNASET2,TCF12,MTUS1,CD5L,LILRB4,ARHGAP26,SDCCAG8,KLHL6,GNB4,MAP4K3,SLCO2B1,CASS4,MAP3K8,SSPN,APBB1IP,ITGAV,ARHGAP12,MT2A,MGAT4A,MGAT5,MTHFD1L,TFRC,FCGR3A,DSCAM,KLF7,MALAT1,TM6SF1,MIR29B2CHG,IFRD1,RANBP9,ST6GALNAC3,SIGLEC8
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_myeloid_MDM_PMID_35803246,Macrophage,SELENOP,SLC40A1,RNASE1,F13A1,STAB1,DAB2,MRC1,FOLR2,LGMN,RBPJ,ARL4C,PLD3,C1QA,LYVE1,SIGLEC1,APOE,GPNMB,APOC1,C1QC,NRP1,LILRB5,C1QB,SLCO2B1,MS4A4A,CTSC,ITSN1,PDGFC,MS4A7,IL2RA,SDC3,IFI27,CD163L1,STARD13,MAF,ABCA1,FCHO2,RGS1,WWP1,TSPAN4,LIPA,TTYH3,AP2A2,MERTK,ANKH,A2M,CD163,FRMD4B,FCGRT,CTSD,CSF1R,ALDH1A1,FMN1,MARCKS,MS4A6A,CD209,RGL1,MYO5A,IGF1,SNX9,PLXND1,ARHGAP18,MT1X,FUCA1,FMNL2,DAPK1,MSR1,PSAP,ATP1B3,CD81,C2,NUPR1,TCF12,BLVRB,TFRC,MAN1A1,EPHX1,AXL,CTSB,LPAR6,CD68,IQGAP2,TIMP2,CXCL12,AC004448.2,ZFAND5,CD72,FPR3,HEXA,LGALS3BP,MT1E,FOSB,SPRED1,ACP5,PMP22,ISG15,PDK4,SNX6,SMPDL3A,CMKLR1,ADAP2,FNBP1,IDH1,PER1,ABCC5,HNMT,FCHSD2,CD14,CR1,FAM20A,LMNA,ITPR2,TMEM176B,NR1H3,FCGR2A,AKR1B1,SESN1,RGS2,CD4,ME1,EPB41L3,LAIR1,MFSD1,GRN,IFIT1,ITGB5,MCOLN1,TCF4,GPR34,PRDX1,TXNIP,RNASE6,FKBP5,CHKA,PEAK1,CCDC200,SGPL1,TNS3,LRP1,TNFAIP2,SCARB2,HERPUD1,SDCBP,IFI44,HLA-DQA2,BMP2K,CHMP1B,HLA-DMB,PLTP,IFI44L,CREG1,TPP1,CD59,SASH1,GIMAP5,ANKS1A,CPM,RHOBTB3,HMOX1,ZNF331,RENBP,IFI6,CLTC,WDFY3,DMXL2,MS4A4E,TRA2B,RBM47,GLUL,BST2,SLC9A9,KIF1B,CD9,MTSS1,AFF1,ELL2,NCF4,MMP14,RNF213,PLEKHO2,SFMBT2,ARHGAP4,HLA-DMA,CREM,C6orf62,SLC15A3,TGFBI,PLA2G7,BLVRA,MGAT1,ARRDC3,ETV5,SLC1A3,MX1,PARP14,C3AR1,QKI,ITGA9,DRAM2,FCGR3A,ACP2
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_myeloid_MDM FTL+_PMID_35803246,Macrophage,SPP1,APOC2,FTL,CSTB,SCIN,NUPR1,HTRA1,APOC1,TMIGD3,MIF,OLFML3,C3,IFI27,TREM2,PLTP,HMOX1,HAMP,APOE,MPC2,TMSB4X,BIN1,ALOX5AP,LGALS1,SERPINF1,FTH1,TUBA1B,GYPC,C1QB,CAPG,OTOA,PIH1D1,PEBP1,LDHA,SELENOW,DBI,GNG10,FCER1G,PRDX1,FSCN1,C1QA,ATP6V1F,C1QC,GM2A,UQCR11,ALDOA,VDAC1,FCGR3A,UQCR10,YWHAH,GATM,CHCHD10,FABP5,UQCRB,NME2,SERF2,ANP32A,S100A11,RAB13,SH3BGRL,PPDPF,VAT1,CREG1,SERPING1,NOP10,NPC2,YBX1,A2M,C4orf3,ATOX1,CD59,UCP2,FCGBP,SNX3,ATP5MD,NENF,C9orf16,RNASET2,HINT1,CTSB,ATP6V0C,PLAAT4,BRI3,COX6A1,NME4,LY96,GPX4,SRP14,NINJ1,NDUFS5,LDHB,OST4,MGST3,HPGDS,COX6C,TMEM14C,NDUFA4,COX7C,ATP5F1E,PLAAT3,DHRS7,CD63,CTSL,BRK1,ROMO1,CALM3,MICOS10,DYNLRB1,TMSB10,NPL,C18orf32,EIF4EBP1,ATP5PF,C1orf54,RAB5C,UQCRQ,ATF5,GUK1,CHCHD2,ATP5MF,TOMM5,SMS,APOO,LAPTM5,VSIG4,PPIA,ST13,PRDX2,CD68,TOMM7,SCP2,ISCU,TPT1,BCAP31,OAZ1,C4orf48,PYGL,VAMP8,SLC2A5,TMEM219,COMMD6,SELENOH,RHOC,ADI1,TMEM230,CD99,HEBP1,NEDD8,SDHC,TFPT,ATP6V0E1,PTMS,SNHG29,PRDX3,COX4I1,VAMP5,COX5A,IDH1,GTF3A,SOD1,AKR1B1,NAA20,LILRB4,NACA,FCGR1A,FKBP8,ATP5IF1,DNASE2,UBA52,DYNLL1,CALM1,TMEM176B,ATP5PO,NDUFB3,PCED1B-AS1,SKP1,FAM162A,IFI27L2,C2,C19orf53,CLTA,POLR2L,SH3BGRL3,NDUFB2,COX7B,SAP18,UBE2L6,DNPH1,LAMTOR2,TMEM176A,GTF3C6,COPS9,MZT2B,RGS10,FAAP20,NDUFC1,ANAPC11,NPM1,MMP24OS,RHOA,GLUL
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_myeloid_Monocytes_PMID_35803246,Monocyte,TIMP1,CCL2,CXCL3,C15orf48,CXCL2,AREG,IFI30,FBP1,CLEC10A,FCN1,CXCL8,VCAN,PLIN2,LYZ,SERPINA1,LGALS3,S100A10,IL1RN,PID1,PLAUR,S100A6,LSP1,VIM,DNAJB1,SH3BGRL3,SMIM25,IL1B,EREG,SLC2A3,HSPA1A,CD52,FABP5,FCGR2B,MCEMP1,UPP1,BCL2A1,EMP3,CD44,FLNA,CLEC5A,TREM1,PHLDA1,CSTB,SDS,FGR,BTG1,PPA1,HSP90AA1,COTL1,ALDOA,FTH1,ANXA2,CFP,S100A4,WARS,GK,HSPD1,HSPH1,AQP9,RGCC,GSTO1,LDHA,CEBPB,PKM,NCF2,JAML,EFHD2,TPI1,VASP,S100A11,THBS1,HSPA5,PCBP1,PLAC8,CTSH,LITAF,CD36,CTSL,GLIPR2,H3F3A,ENO1,CYP27A1,ANPEP,C1orf162,LILRA5,PGK1,NFKBIA,IER3,LILRB3,ANXA1,PRELID1,JARID2,ATP2B1-AS1,INSIG1,HMGA1,GAPT,CD300E,ITGAX,LTA4H,THBD,SOD2,CD1D,PGAM1,STXBP2,ZYX,ACTG1,DUSP2,LGALS2,SLC25A37,EIF1,IFITM2,LCP1,CLIC1,ERO1A,PIM1,AC015912.3,IL1R2,HLA-DRA,FNDC3B,IFITM3,CNN2,HLA-DRB5,H2AFY,RNH1,MMP19,CD48,PDIA3,GPR183,S100A9,LILRB2,EIF4A1,HPCAL1,MYD88,PFN1,SOCS3,CDK14,MYADM,HLA-DQB1,UBE2D1,NDRG1,HBEGF,TAGLN2,HLA-DQA1,PHACTR1,MARCO,PPIF,PPP1R15A,FLOT1,AP1S2,LILRB1,ARF5,CALR,LILRA2,FKBP1A,ACTN1,RALA,RIPK2,PSMA6,IFITM1,CSTA,PNP,ALOX5AP,RBM3,FPR1,ALDH2,ATP6V0D1,SDF2L1,HK2,TPM4,FXYD5,CALHM6,IGSF6,SEMA6B,HLA-DPB1,SLC16A3,GBP1,SLC39A8,SRSF9,PTMA,H3F3B,ACP5,TMEM167A,ASGR1,PTGER2,BHLHE40,CCRL2,CORO1A,CHMP4B,MIF,VEGFA,CCR5AS,MBOAT7,CEBPD,ARF6,SERP1,GNG5,CD9,PPARG,PIM3,DDX21
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_myeloid_cDC2_PMID_35803246,Dendritic cell,LTB,CD1C,S100B,PPP1R14A,FCER1A,JAML,AREG,PLAC8,PPA1,AFF3,SPINT2,LSP1,PLD4,HLA-DQB1,COTL1,PAK1,CNN2,HLA-DQA1,CD1E,CRIP1,PKIB,SLC38A1,CFP,IDO1,IFITM2,CD1A,HLA-DPB1,CRYBG1,CST7,DDIT4,SEPTIN6,CCSER1,TAGLN2,MYL12A,IL2RG,IRF4,GDI2,ACTG1,LST1,EIF3L,SYNGR2,IFITM1,SNHG29,GSTP1,HLA-DRA,LGALS2,BHLHE40,NPM1,CCND3,CXCR3,CD69,RACK1,GAS5,TRPM4,HLA-DPA1,GABARAPL2,GSN,SPIB,ARF6,CKLF,CLEC4A,CA2,FLT3,ENTPD1,HNRNPA1,IGFBP7,EEF2,HINT1,CORO1A,NET1,P2RY14,SMCO4,CYTIP,APOO,STK17B,TNFSF9,HDAC9,LCP1,TAP1,OPN3,GLIPR1,VASP,CD52,SPN,UCP2,PABPC1,DAPP1,CTSH,ZFAS1,CD74,LIMD2,EIF3E,SIGLEC6,DNAJC4,BTF3,TUBA1A,ITGB7,ASB2,SNHG15,NACA,GAPT,CCR6,PIM1,FDFT1,HSH2D,HLA-DRB1,TCTN3,HLA-DQB2,DUSP2,NAP1L1,CCNI,PSTPIP2,ACTR3,HIP1,HLA-DRB5,MYD88,EIF3F,ITM2C,TLR10,COMMD6,CD48,HERPUD1,HLA-DOB,SAMHD1,CLECL1,LDHB,ENHO,PALLD,UVRAG,PTPN6,LPXN,FAU,HMGN1,EIF3M,RUNX3,SUSD3,NDRG2,ACAA1,H2AFY,RHOF,GCA,RASSF5,UNC119,MYADM,CST3,ZNF385A,CXCR4,RIPOR2,CD55,APEX1,SLC25A5,CD1D,C15orf48,CYFIP2,CIITA,SNHG5,TNNI2,TMEM14C,REC8,MAP3K8,PPP1R16B,GPAT3,ANAPC16,RGS19,SMAGP,CCT8,MBOAT7,AC004687.1,C15orf39,MCOLN2,ABI3,CAP1,KCNMB1,SLC25A6,PTPN1,CIB1,RAB24,UBA52,CAT,CEACAM4,SPINT1,NOP53,IL16,ARL6IP5,ADAM8,SEL1L3,PRMT1,RSL24D1,AAAS,PIK3R6,PRCP,PRMT2,KCNK6,PLP2,ITGB2-AS1,BCL3,TMEM109,TAP2,COX7A2L,ARL14EP
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_myeloid_DC3_PMID_35803246,Dendritic cell,CCL19,CCR7,BIRC3,MARCKSL1,LAMP3,TXN,UBD,IDO1,CRIP1,CCL22,FSCN1,IL7R,PPA1,LSP1,DUSP5,KIF2A,EBI3,CDKN1A,CST7,GRSF1,TUBA1C,MIR155HG,CXCL9,LY75,DAPP1,NUB1,GSTP1,BCL2L14,FLT3,TRAF1,BTG1,DUSP4,CFLAR,TBC1D8,ANXA6,UVRAG,GABARAPL2,RELB,KDM2B,CSF2RA,LAD1,ID2,SYNGR2,IL15,RFTN1,RAB9A,CERS6,HMGN3,CD200,SLCO5A1,IL32,ZFAS1,CLIC2,ENOX1,MGLL,LGALS2,CD40,VOPP1,IL2RG,C17orf49,GPR157,ANKRD33B,CD83,PNRC1,SUB1,GSN,ACTG1,TBC1D4,TSPAN13,PTPN1,STK4,RAB8B,BASP1,ANTXR2,ETV3,MAP3K13,TMEM176A,GPR132,NET1,MALAT1,LIMCH1,MALT1,ERICH1,NFKB1,JAK1,IRF4,RASSF4,HINT1,PALM2-AKAP2,NFKBIA,ALDH2,H2AFY2,NAP1L1,BZW1,GADD45A,TAGLN2,AUTS2,SINHCAF,ARHGAP10,TVP23A,SLC22A23,ZEB1,VDAC2,MAP3K14,POGLUT1,PIM3,MREG,GBP1,NDE1,FAM49A,TRIP10,H2AFZ,ISG20,SPIB,WNT5B,IRF1,GCSAM,NIBAN1,SEC61B,SOCS1,TRAFD1,REPIN1,RHOF,PPP1R14A,LRRK1,GPX4,ADORA2A,NMRK1,BHLHE40,TMSB10,REL,GPC5,ARAP2,PABPC1,ANXA7,NAV1,PFN1,GPBP1,RHOC,NABP1,MYO1G,OSTF1,PDCD1LG2,CYTIP,PPM1K,MCM5,IL4I1,ADAM8,FAM118A,NECTIN2,TRADD,ITGA4,ABCC4,ETV6,G0S2,IDO2,NCCRP1,BCL2A1,N4BP2L1,LRRFIP2,FLOT2,HLA-DQA1,FNBP1,CLEC2D,PTMA,HSH2D,LYST,CNN2,BCL3,CYB5A,NUAK2,ZFP36L1,CEP350,CD274,LMNB1,PLEKHG1,PTGES2,ATP8A1,ST8SIA4,TMEM131L,ROBO1,CD80,MTHFD2,LCP1,HMSD,EIF1,TUBA1A,PMAIP1,ARL6IP5,CTSH,RAB30,TOMM34,WARS,HLA-DOB,HLA-DPB1,PSME1,GBP4,F11R,MOB1B,SERPINB1
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_tcells_Cycling cells_PMID_35803246,T cell,STMN1,TUBA1B,TYMS,HIST1H4C,HMGB2,RRM2,UBE2C,HMGN2,MKI67,PCLAF,TOP2A,H2AFZ,NUSAP1,CENPF,CKS2,CDK1,ASPM,DUT,PTTG1,H2AFV,HMGB1,PCNA,CCNA2,MCM7,FABP5,H2AFX,TPX2,CDC20,ZWINT,CKS1B,HLA-DRA,BIRC5,KPNA2,ARL6IP1,CCNB2,TK1,SMC4,CDKN3,CENPU,TMPO,CENPM,TUBA1C,ASF1B,DLGAP5,PLK1,DEK,KIFC1,MT2A,CDT1,UBE2T,CCNB1,SMC2,KIF22,MAD2L1,CENPE,CLSPN,RPA3,SLC25A5,TMEM106C,TPI1,AURKB,HLA-DRB1,JPT1,MCM5,HIST1H1B,RAN,LMNB1,RANBP1,DHFR,CENPW,CDCA8,FEN1,GTSE1,HMMR,UHRF1,PKMYT1,DDX39A,HMGB3,MCM3,NUDT1,CRIP1,KNL1,CENPA,NUF2,ANXA5,KIF20B,COX8A,ANP32B,CALM3,NASP,SPC25,ANP32E,CXCL13,COTL1,NUCKS1,ATAD2,DNAJC9,HIST1H1E,EZH2,RRM1,CDCA3,HNRNPAB,CENPN,HIST1H2AJ,RAD51AP1,PFN1,RACGAP1,H2AFY,SIVA1,TROAP,CARHSP1,PKM,CENPK,GINS2,PPIA,PGAM1,IDH2,SNRPB,HNRNPA2B1,SNRPD1,FANCI,NCAPH,LGALS1,DTYMK,RAD21,CKAP2L,MT1E,GGH,SLBP,TCF19,CD74,HLA-DPA1,SNRPG,UBE2S,DNMT1,NCAPG,SKA2,KIF23,PTMA,ANAPC11,ACTG1,CALM2,NDC80,CFL1,CDCA5,CDCA7,PHF19,SGO2,CEP55,MCM2,GNG5,USP1,BANF1,YWHAH,ATP5MC3,GSTP1,LSM4,ENO1,SMC1A,KIF11,KIF2C,BUB1,NSD2,APOBEC3B,HELLS,PRDX3,MCM6,MXD3,PRC1,CDCA2,LSM5,HMGN1,LIG1,KIF15,SRSF3,C12orf75,CBX3,LDHA,MCM4,SNRNP25,NAP1L1,DIAPH3,FBXO5,SAE1,ARPC5,HIST1H2AM,AURKA,DTL,RNASEH2A,COX5A,TALDO1,LSM3,HIST1H2AI,PSMC3,C17orf49,DLEU2,YBX1,HNRNPA3,CDK2AP2,HJURP
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_tcells_Myeloid doublets_PMID_35803246,T cell,SPP1,APOE,FTL,C1QB,C1QC,RNASE1,C1QA,APOC1,CST3,IFI30,TYROBP,CTSB,AIF1,FTH1,CD68,NPC2,FCER1G,GLUL,IFITM3,MS4A6A,PSAP,HLA-DRA,CD14,LGALS1,HMOX1,MS4A7,IFI27,S100A9,FOLR2,FCGRT,CSTB,SAT1,PLTP,SPI1,CD163,CTSL,CTSZ,LGMN,GRN,RAB31,LST1,MAFB,HLA-DRB1,S100A11,CTSD,CD74,A2M,MS4A4A,ASAH1,NR4A1,VSIG4,DAB2,FCGR2A,BRI3,PLXDC2,BLVRB,HLA-DPA1,TUBA1B,GSN,MARCKS,TIMP1,MSR1,HLA-DPB1,FCGR3A,HLA-DQA1,TMIGD3,PLIN2,ADAP2,SLCO2B1,ANXA5,RASSF4,LGALS3,NAMPT,HIST1H4C,TTYH3,GABARAP,RNF130,TNFRSF4,CREG1,GPX4,HLA-DRB5,HLA-DQB1,HSPB1,CD83,LRMDA,CXCL16,NINJ1,TYMP,GNAI2,IGSF6,CD63,CAPG,CCL3,RNASE6,CD81,ARHGAP18,RHOB,IDH1,LY96,LY86,PLD3,H1FX,AKR1A1,RAC1,YPEL3,APLP2,C1orf162,PRDX1,MIF,EFHD2,FABP5,FGL2,CEBPD,NDUFB2,AKR1B1,PKM,ANXA2,AP2S1,NAIP,DBI,ALDOA,YBX1,DDAH2,NAGK,MFSD1,FRMD4B,SDCBP,ATP6V1F,HLA-DMA,SERF2,TPI1,YWHAH,HSBP1,HCK,SNRPG,DEK,TPM4,LIPA,PGD,COX8A,EIF4G3,LGALS9,TFRC,NME1,TBXAS1,MKNK1,ELL2,FP236383.3,IFNGR2,GSTO1,ISG15,YWHAE,AP2A2,CD4,ATP1B3,C3AR1,DUT,GRINA,PICALM,LAP3,TAF10,LAGE3,ARPC1B,TNFRSF1B,SMS,MLEC,TNFRSF18,TNFSF12,CTSH,SOD2,GNG5,TXN,NOP10,PGLS,TMEM219,LAIR1,SEC61B,S100A6,ATOX1,PYCARD,MEF2A,IER5,NUDT1,LAMTOR2,UQCRQ,RAB5C,NDUFA13,SPATS2L,SNX3,TXNDC17,ANAPC11,MGST3,TACC1,VKORC1,DYNLL1,NME2,ELOB,TSPO,ATP5MD,ATP5MC3
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_tcells_Tregs_PMID_35803246,T cell,FOXP3,TNFRSF4,RTKN2,IL12RB2,TBC1D4,TNFRSF18,LTB,BATF,IKZF2,SAT1,IL32,IL2RA,CARD16,ICOS,CTLA4,TIGIT,CCR8,CTSC,PIM2,MIR4435-2HG,LINC01943,PMAIP1,S100A4,DNPH1,AC017002.3,TNFRSF1B,CD4,CORO1B,MAGEH1,GBP5,PELI1,SPOCK2,LAIR2,AL136456.1,LAYN,GBP2,STAM,OAS1,PHTF2,PBXIP1,UGP2,DUSP16,SLAMF1,NCF4,BEX3,NAMPT,IFI6,DUSP4,ARID5B,FCMR,ACP5,SYNGR2,GK,HSPA1A,SPATS2L,UCP2,PHACTR2,TYMP,IL2RG,CD27,GLRX,EPSTI1,PHLDA1,BTG3,IL18R1,BIRC3,RHOC,GADD45A,ISG15,PKM,USP15,CD28,SKAP1,TRAF1,ENTPD1,FAS,COX5A,SH2D2A,C4orf48,CD2,CD74,MX1,GPHN,MAST4,RGS1,FBLN7,RHBDD2,SAMSN1,CKLF,PRDM1,CASP1,RHOG,ETV7,ATOX1,FOXO1,SOD1,LGALS3,CD59,CREM,LGALS1,CXCR6,OAZ1,NIBAN1,IGFLR1,CD79B,RAP1A,HNRNPLL,CXCR3,IL10RA,HLA-A,TMEM173,TNFRSF9,FAM110A,HTATIP2,CYTOR,SAMHD1,TXN,STAT1,SIRPG,ARPC1B,LDLRAD4,NDUFC1,PTTG1,KAT2B,YWHAB,PRDX1,ENO1,SNX9,MAN1A2,MAF,CD58,TIMP1,PRDX2,SCAND1,UBC,TLK1,CACYBP,LY6E,TNIK,DOK2,ALDOA,STK17B,TPP1,GRINA,CTSB,CASK,CALM3,PCED1B,TRAF3,TANK,ADI1,ISG20,GLCCI1,NOP10,ZC3H7A,PIM3,MYL6,SFT2D1,ZBTB38,GTF3C6,SMAP2,P2RY10,CD247,ZFP36L1,CNIH1,ARL6IP5,MALAT1,CCM2,NCOA3,LGALS9,GATA3,IL2RB,CUTA,PAK2,TMSB10,NDUFA4,CCND2,ZNF292,ANKRD10,FOXN3,BCL3,HLA-DRB1,VAMP5,SGMS1,COX17,SERPINB9,SMYD3,PBX4,HPRT1,PGAM1,NFKBIZ,SEPTIN6,PSAP,NPTN,GRSF1,PPM1G,STN1,SH3BGRL,UBE2B,IFI44L
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_tcells_CD8+ T cells TOX+_PMID_35803246,T cell,CCL4L2,CD8A,CCL5,NKG7,LAG3,CD8B,IFNG,GZMB,KLRD1,CCL4,HAVCR2,LINC02446,LYST,LINC01871,SNAP47,PTMS,CCL3,PDCD1,MIR155HG,CXCL13,PRF1,AC243829.4,CXCR6,VCAM1,FAM3C,GZMH,KLRK1,CTSW,KIR2DL4,LINC01480,CST7,KLRC4,CRTAM,CD63,TOX,SIRPG,TNFRSF9,CBLB,CD7,RAB27A,GZMA,CTLA4,HLA-DQA1,CTSD,HLA-DRB1,FABP5,HLA-DPA1,ID2,GFOD1,IGFLR1,RHOB,RBPJ,HLA-DMA,HLA-DRA,RGS1,PTPN22,HLA-DPB1,CD27,APOBEC3G,HLA-DRB5,ENTPD1,TIGIT,FASLG,LINC01943,HOPX,ITGAE,ITM2A,RGS2,FKBP1A,CD38,ALOX5AP,SNX9,JAML,CD2BP2,CHST12,ACP5,DRAIC,FUT8,CD3D,PHLDA1,APOBEC3C,COTL1,IL6ST,LSP1,CYTOR,DTHD1,HCST,TNFRSF1B,SLA,PTPN7,PAM,TRG-AS1,CD74,IKZF3,RNF19A,OASL,ZEB2,DGKH,EOMES,DUSP4,SLA2,CLEC2D,TNIP3,WARS,CLEC2B,CMC1,PRKCH,ATXN1,PTPRCAP,BST2,SEM1,MT2A,ASXL2,CD2,CDK2AP2,LINC01934,RABAC1,DUSP2,PTPN6,BLOC1S1,HLA-DQB1,SRRT,CLIC3,MSN,GABARAPL1,SERPINB1,GALM,PSMB9,ABI3,ANXA5,DRAP1,IFI27L2,SRGN,GSTP1,NCALD,AC243960.1,UBE2F,PARK7,SAMSN1,LBH,SOD1,SYTL3,ARHGAP9,CEMIP2,UCP2,PCED1B,SH2D2A,MT1F,ARPC2,UBB,TRAF5,SIT1,ADGRE5,PSTPIP1,GBP2,FYN,VAMP5,SLC7A5,PPM1M,SFMBT2,ITGA4,PTPRA,GGA2,PSME2,IL2RG,PSMB8,ITGB7,PLSCR1,NAP1L4,YARS,TRAC,EVL,PSMA2,PLAAT3,SP140,EID1,IDH2,CFLAR,GBP5,PGAM1,B3GNT2,TAP1,LCP2,CLIC1,SIPA1L1,CD3G,GMDS,PRDX6,PRDM1,UBASH3B,CTSC,PRDX5,DYNLL1,UBC,RUNX3,RAB1B,CD3E,THEMIS,STAT3,ZYX
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_tcells_NK cells_PMID_35803246,NK cell,GNLY,TYROBP,AREG,FCER1G,XCL1,XCL2,KLRC1,IER2,CCL3,FCGR3A,KLRF1,CEBPD,SPON2,KLRB1,KLRD1,TRDC,CLIC3,FGFBP2,IFITM3,MATK,PRF1,GZMB,MAP3K8,HOPX,SH2D1B,NKG7,CTSW,IL2RB,TMIGD2,FOS,NFKBIA,TXK,CMC1,KLRC2,AOAH,PTGDR,CCL4,EFHD2,MCTP2,IFITM2,IGFBP7,PLEK,LAT2,DUSP2,FGR,NCR1,CD300A,CD160,BTG2,PLAC8,CD247,MAPK1,NR4A2,LYN,CXXC5,LINC00299,GSTP1,MAFF,ZBTB16,CD7,TLE1,ZFP36,C1orf162,C1orf21,GPR65,PLCG2,NR4A1,AC017104.1,KLRK1,SYK,KIR2DL4,TGFB1,FCRL6,NCR3,XBP1,GADD45B,BHLHE40,SLC16A3,TBX21,TTC38,NFKB1,APMAP,DUSP1,FOSL2,LINC02256,CD63,RIN3,CST7,HSH2D,ATP8B4,ID2,DDIT4,GLIPR2,BIN2,ADGRG1,TPST2,REL,GZMM,ERGIC1,PPP1R15A,TNFRSF18,AC020916.1,IRF1,CD69,GNPTAB,SYTL3,ZEB2,GZMA,SAMD3,STOM,AC004687.1,OSTF1,CD38,CD244,MYO1F,IFITM1,CLASP1,ITGB2,VPS37B,LITAF,RHOC,JAK1,PIK3R1,ABHD17A,VAV3,CD55,CEMIP2,ADGRE5,CLDND1,SRGN,B4GALT1,CDK17,TLN1,TRBC1,CHST12,EIF3G,PTPN4,GLUL,TES,MBP,AKNA,CDC42SE1,RASA2,FLOT1,MVD,TLE4,PDE4A,RNF125,ADAM8,SKIL,PITPNC1,FOSB,TFDP2,CEBPB,ARHGAP9,STARD3NL,FAM49B,CARD11,CTSD,YPEL3,UBE2F,AC007384.1,APOBEC3G,INPP5D,RASSF1,GFOD1,STAT4,CCDC69,RAB24,PNRC1,CCND3,SQSTM1,DIP2A,SIPA1,G6PD,NFKBIZ,PRMT2,SUN2,RAP1B,TCIRG1,CYBA,ARPC5L,PRKX,RUNX3,BEX4,ACAA2,MAPRE2,CLEC2B,ADD1,DHRS7,SLC9A3R1,C5orf56,MPG,STK17A,SSH2,HCST,ASAH1,SOCS1,CCNH,ALOX5AP
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_tcells_Tfh-like cells_PMID_35803246,T cell,CXCL13,NMB,NR3C1,ICA1,IL6ST,PTPN13,FKBP5,PDE7B,MTHFD2,NUDT16,TSHZ2,BTLA,CD200,RBPJ,ELMO1,TNFRSF4,FBXO32,YWHAQ,CRYBG1,BATF,SRGN,SESN1,BIRC3,TNFSF8,NFKBIA,RNF19A,AGFG1,RORA,DRAIC,NAP1L4,LINC00892,TOX2,SMARCA2,THADA,AC004585.1,SNX9,SLA,CTSB,CD40LG,CD4,KLRB1,IFI44L,ITPR1,TIAM1,TNFRSF18,TMEM243,LMO4,SMCO4,TOX,LRRC8D,LDLRAD4,TSPYL2,FBLN7,GK,LIMS1,PPP1CC,CNIH1,TMEM173,NCALD,CCDC6,MAF,SPOCK2,NBN,AP3S1,LAIR2,NCF4,DUSP4,CORO1B,ITM2A,PDE4D,SLC4A7,EPSTI1,POR,PTPN1,CAMK2D,DNPH1,CAPN7,CTLA4,H2AFZ,DNAJB14,RILPL2,IFI44,TMEM123,MT2A,PDCD1,LRMP,SOD1,ALOX5AP,TGIF1,ISCU,GLCCI1,IQGAP1,CD226,TNFAIP8,CD59,HMGB2,FKBP1A,GRSF1,CCDC18-AS1,LINC01934,BNIP3L,SRI,CITED2,RNASET2,RNF115,STAT4,PDE3B,TNFRSF25,PHACTR2,DR1,ETV6,MT1E,TAGAP,FOXN2,CYTIP,MSI2,TANK,CUTA,ITK,C9orf16,FAM107B,CLNS1A,SYPL1,PRDX1,VSIR,LGALS9,RHOH,GPX4,ZC3H7A,GPRIN3,CCDC167,SFXN1,EPS15,ARID5B,NDFIP1,CD28,TBC1D4,RABGAP1L,SMYD3,BTG3,IFI6,SEC11A,C4orf48,CFLAR,ZNF831,NDUFV2,EPC1,ARID5A,TMEM167A,CLASP1,PKM,NCOA7,TPI1,ATP11B,CIRBP,ECH1,PLIN2,OGT,JARID2,BRK1,CLPP,MX1,ATXN1,VDAC1,MDFIC,TYMP,GNG5,SMS,TMEM258,FTH1,NFATC2,ACADVL,IFITM1,INPP4B,WNK1,DNAJC15,PAG1,GRINA,FDFT1,TNIK,PEBP1,BST2,S100A11,FAM177A1,IFI16,ZEB1,RAP1A,SMAP2,CELF2,TARSL2,PTRHD1,IFITM2,PMAIP1,VOPP1,AKAP13,PHTF2,RAPGEF6,ANAPC16,SEM1,CTNNB1
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_tcells_CD8+ T cells TCF7+_PMID_35803246,T cell,GZMK,LYAR,AOAH,TC2N,ITM2C,ANXA1,SAMD3,PARP8,GZMA,CLDND1,GZMM,LINC01138,P2RY8,MGAT4A,AHNAK,THEMIS,ARL4C,PPP2R5C,PDCD4,PITPNC1,GZMH,CXCR4,DNAJB1,STK17A,MATK,JUN,JUNB,DUSP2,ZFP36L2,MCUB,PIK3R1,MBP,S100A10,C12orf75,GIMAP5,CD44,PIP4K2A,NCF1,GIMAP1,MYADM,LIME1,SUN2,TUBA4A,FAM102A,EML4,CD8B,IL7R,GIMAP7,CST7,EMP3,PLAAT4,BIN2,ABLIM1,TENT5C,CD69,ZFP36,KLRK1,RNF125,SYNE1,VIM,ARRB2,IL16,RASA3,TXNIP,CAMK4,AKNA,STOM,ATM,ANXA2,RIPOR2,CYBA,EPB41,PRKCB,IDS,TGFB1,CDC42EP3,EMB,CD48,S100A6,KLF2,UTRN,SCML4,GIMAP4,CDC42SE2,CNN2,NFATC2,FLNA,GPR183,SELPLG,ARHGAP45,CCL4,BCL11B,CD99,CLEC2B,PAXX,BTG1,GLIPR2,SLC9A3R1,CD52,DUSP1,GPR65,NIBAN1,IER2,PTPN4,ZBTB20,LCP1,C5orf56,SLAMF6,LEPROTL1,SMCHD1,BTG2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Dissecting the treatment-naive ecosystem of human melanoma brain metastasis,35803246,MBM_sc_tcells_CD4+ T cells_PMID_35803246,T cell,IL7R,KLF2,FOS,SELL,CCR7,SOCS3,LTB,AQP3,GPR183,MAL,LEF1,CD40LG,ANXA1,PRKCQ-AS1,ANK3,TCF7,PABPC1,SLC2A3,TOB1,NOSIP,TPT1,FLT3LG,JUNB,SERINC5,APOO,GAS5,EEF2,S1PR1,NOP53,FXYD5,LDLRAP1,TMEM123,RIPOR2,RASGRP2,TXNIP,CRYBG1,THEM4,LDHB,KLF6,CD69,TIMP1,TRADD,ICAM2,TLE5,SARAF,EIF3E,SNHG29,RNASET2,TNFSF8,RACK1,CDC14A,FP236383.3,FOXP1,MGAT4A,RASA3,PIM1,CAMK4,LINC00861,FOSB,SORL1,ZFP36L2,SNHG8,CD55,MCUB,P2RY8,PTGER2,VIM,NACA,SNHG6,EIF3L,JUN,CITED2,ZFAS1,GIMAP7,EIF2S3,NDFIP1,RCAN3,RBFOX2,TXK,GIMAP5,CD4,TNFAIP8,EIF4B,ADD3,PTGER4,DUSP1,PLSCR3,SERP1,RORA,SOD2,TC2N,S100A10,VSIR,TESPA1,GIMAP1,TOMM7,BTG2,DGKA,MAML2,ERN1,UBA52,DDIT4,SMCHD1,ATP1A1,ITK,KLRB1,RGCC,TSC22D3,ARHGAP15,FTH1,TTC39C,DNAJB1,AHNAK,FBL,S1PR4,SNHG32,FAU,STK38,PXN,CD48,CD5,MALAT1,PRMT2,BCL2,SOCS1,SPOCK2,FKBP11,S100A11,PBXIP1,CYTH1,PFDN5,IKZF1,BTG1,BIRC3,SNHG5,PIK3IP1,RSL1D1,EMP3,LEPROTL1,PPP1R15A,ZC3HAV1,TOMM20,NCF1,R3HDM4,RBMS1,ATM,SYPL1,ABLIM1,ALKBH7,TRAPPC6A,RAPGEF6,SF1,GSTK1,LINC01619,PLP2,SNHG16,AC138123.1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,BASOPHILE_PMID_30388455,Basophil,ANPEP,CCR3,CD44,CD63,CD69,ENPP3,ICAM1,IL3RA,LAMP1,TLR4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,B CELL_PMID_30388455,B cell,BLK,CD19,CD2,CD22,CD40,CD5,CD69,CD70,CD79A,CD79B,CD80,CD86,CD93,FCER2,MS4A1,PAX5,PDCD1,SDC1,TNFRSF13B,TNFRSF13C,TNFRSF9,TNFSF4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,EOSINOPHIL_PMID_30388455,Eosinophil,C3AR1,C5AR1,CCR1,CCR3,CD244,CD52,CD53,CXCR3,FCER2,FUT4,IL9R,ITGA4,LAIR1,PTGDR2,S100A9,SIGLEC10,SIGLEC8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,MAST CELL_PMID_30388455,Mast cell,ENPP3,KIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,MDSC_PMID_30388455,Monocyte,CCR7,CD1A,CD1B,CD1C,CD207,CD209,CD4,CD40,CD80,CD83,CD86,CMKLR1,HLA-DOA,HLA-DOB,HLA-DRA,HLA-DRB1,HLA-DRB5,HLA-DRB6,ITGA4,ITGAM,ITGAX,LY75,NRP1,PDCD1LG2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,MYELOID DENDRITIC CELL_PMID_30388455,Dendritic cell,CCR7,CD1A,CD1B,CD1C,CD207,CD209,CD4,CD40,CD80,CD83,CD86,CMKLR1,DCX,ITGA4,ITGAM,ITGAX,LY75,NRP1,PDCD1LG2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,NAIVE CD4 T CELL_PMID_30388455,T cell,CCR7,CD3D,CD3E,CD3G,CD4,SELL,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,NEUTROPHIL_PMID_30388455,Neutrophil,ANPEP,C5AR1,CD14,CD33,CEACAM8,CSF3R,CXCR1,CXCR2,FCGR1A,FUT4,ITGAM,ITGAX,MME,PECAM1,SELL,TLR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,NK CELL_PMID_30388455,NK cell,B3GAT1,CD244,CD69,IL2RB,ITGA2,ITGAM,ITGAX,KLRA1,KLRB1,KLRD1,KLRK1,NCAM1,NCR1,NKG2,SIGLEC7,SLAMF6,SLAMF7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,PLASMACYTOID DENDRITIC CELL_PMID_30388455,Dendritic cell,CCR7,CD1A,CD1B,CD1C,CD4,CD40,CD80,CD83,CD86,CD8A,CLEC4C,CMKLR1,IL3RA,ITGA4,ITGAM,ITGAX,NRP1,PDCD1LG2,TLR9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,T FOLLICULAR HELPER_PMID_30388455,T cell,BCL6,CD3D,CD3E,CD3G,CD4,CD40LG,CD84,CXCR5,ICOS,IL6R,PDCD1,SLAMF1,STAT3,TNFSF4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,TH1_PMID_30388455,T cell,CCR1,CCR5,CD4,CSF2,CXCR3,DPP4,HAVCR2,IFNA1,IFNGR1,IL2,KLRD1,TNF,TNFSF11,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,TH2_PMID_30388455,T cell,CCR3,CCR4,CCR7,CCR8,CD4,CSF2,CXCR4,GATA3,HAVCR1,ICOS,IL10,IL13,IL1R1,IL4,IL5,IL6,PTGDR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,TH9_PMID_30388455,T cell,CD3D,CD3E,CD3G,CD4,GATA3,IRF4,STAT6,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,TH17_PMID_30388455,T cell,CCR4,CCR6,CD38,CD3D,CD3E,CD3G,CD4,IL17A,IL17F,IL1R1,IL21,IL22,KLRB1,LINC-ROR,STAT3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,TH22_PMID_30388455,T cell,AHR,CCR10,CCR4,CCR6,CD3D,CD3E,CD3G,CD4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,TREG_PMID_30388455,T cell,CCR4,CD4,CNGB1,CTLA4,ENTPD1,FOXP3,IKZF2,IL2RA,ISG20,ITGAE,LAG3,LRRC32,NT5E,SELL,TNFRSF18,TNFRSF4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,CYTOTOXIC CD8 T CELL_PMID_30388455,T cell,CCL3,CCL4,CD2,CD3D,CD3E,CD3G,CD8A,CD8B,CST7,GZMA,GZMB,IFNG,NKG7,PRF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,MACROPHAGE_PMID_30388455,Macrophage,CCR5,CD14,CD163,CD33,CD68,CD80,CD86,CSF1R,ENG,FCGR1A,FUT4,ITGAL,ITGAM,ITGAX,LAMP2,LILRB4,TLR2,TLR4,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,CYTOTOXIC T CELL (SPECIFIC MARKERS)_PMID_30388455,T cell,CCL3,CCL4,CST7,GZMA,GZMB,IFNG,NKG7,PRF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,EXHAUSTED T CELL (SPECIFIC MARKERS)_PMID_30388455,T cell,CTLA4,HAVCR2,LAG3,PDCD1,TIGIT,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,NAIVE T CELL (SPECIFIC MARKERS)_PMID_30388455,T cell,CCR7,LEF1,SELL,TCF7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
A Cancer Cell Program Promotes T Cell Exclusion and Resistance to Checkpoint Blockade,30388455,TREG (SPECIFIC MARKERS)_PMID_30388455,T cell,FOXP3,IL2RA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G1- B cells_PMID_30388456,B cell,IGHD,PAX5,FCRL1,CR2,VPREB3,FCER2,CD19,EBF1,CD22,BANK1,CLEC17A,FCRLA,FCRL2,MS4A1,BLK,RALGPS2,TCL1A,TLR10,FAM129C,CNR2,ARHGAP24,KIAA0125,HLA-DOB,IGHM,KIAA0226L,CD79A,BCL11A,STAP1,IGLC3,PKIG,FCRL5,AFF3,COBLL1,SPIB,SWAP70,IGLL5,ADAM28,BLNK,IGLC2,IGKC,IGHG3,WDFY4,MEF2C,IGHG2,CCR6,IGLC1,SMIM14,POU2AF1,CD79B,CD40,HVCN1,TCF4,BTK,RASGRP3,CXCR5,IGHG1,PDLIM1,PHACTR1,NCF1,FGD2,SIGLEC14,HLA-DOA,MICAL3,RABEP2,LY86,IRF8,EAF2,CD72,SYK,MGAT5,CD83,PLCG2,ALOX5,DOK3,CIITA,CDCA7L,PIK3C2B,LAT2,TPD52,P2RX5,AKAP2,CYBB,SNX29,RAB30,STX7,POU2F2,FCGR2B,HLA-DMB,LY9,GPR18,HLA-DQB2,ORAI2,CHD7,CYB561A3,IFT57,HLA-DQA2,CTSH,FCHSD2,PIK3AP1,PLEKHF2,HLA-DQA1,TMEM156,SNX2,FAM65A,TMEM154,CCR7,IFNGR2,PXK,SELL,PLAC8,SYPL1,TSPAN3,HLA-DQB1,DRAM2,DGKD,HIP1R,HLA-DRA,ZCCHC7,DAPP1,KIAA0922,DENND3,SEL1L3,PARP15,ADAM19,BCAS4,KIAA1033,DMXL1,SPINT2,SKAP2,DNAJC10,ST6GAL1,PPAPDC1B,HLA-DMA,CD55,ITPR1,AP1B1,NUP88,UVRAG,C9orf72,SYVN1,NFKBID,GNB5,IFI30,LTB,IL4R,ARHGAP17,MBD4,HSH2D,FAIM3,FAM65B,NCOA3,S1PR1,CHMP7,KIAA0430,SYNGR2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G2- Plasma cells_PMID_30388456,B cell,SDC1,IGLV6-57,IGHV3OR16-9,TNFRSF17,IGLV3-1,HID1,IGHG4,IGHV3-48,IGHA2,IGHV3-7,IGKV3OR2-268,IGHV3-11,IGHG2,IGHA1,IGHG3,DERL3,IGLC1,IGKV4-1,IGKV3D-15,IGLC7,IGLL5,IGHV3-21,IGKV3-11,IGHV1-69,IGJ,IGHG1,IGHV3-23,TXNDC5,PYCR1,FCRL5,SPAG4,IGKV1D-39,IGKV3-20,IGLC2,TRAM2,CPNE5,MZB1,PNOC,GAB1,IGHV3-30,IGLC3,P2RX1,COBLL1,IGKC,HIST1H2BG,SPATS2,CHPF,POU2AF1,PRDX4,SLC17A9,FKBP11,MANEA,EAF2,TRIB1,CLIC4,CD79A,GSTM2,PDK1,XBP1,CRELD2,ANKRD28,BLNK,HIST1H2BC,SELM,MCEE,MANF,ITM2C,RRBP1,RAB30,MEI1,CASP10,CLPTM1L,GMPPB,FKBP2,SLC38A5,PPAPDC1B,SDF2L1,ST6GALNAC4,TXNDC11,FNDC3B,C11orf24,SIL1,BSCL2,TPD52,FBXO18,SEC24D,MAGED1,PLCG2,HSPA13,HIST1H2BD,SYVN1,SEC11C,CPEB4,SEC24A,UBE2J1,EIF2AK4,TMEM214,TCF4,SEL1L,WIPI1,TXNDC15,MEF2C,VIMP,TMEM208,HIST1H1C,CLCC1,AQP3,ALG5,UAP1,TMEM19,ZBP1,LMAN1,KDELR1,TOR3A,ARSA,CCPG1,TMEM205,CHID1,SRPRB,ERLEC1,HSH2D,DNAJB9,ICAM2,FNDC3A,C19orf10,CREB3L2,QTRT1,PREB,SEL1L3,AARS,AGA,DUSP5,PDIA4,CD59,CALU,NME1,THEMIS2,DTNB,GMPPA,IGHM,ELL2,KNTC1,HDLBP,EDEM2,FBXW7,NPC2,TMEM147,TAPBPL,SLC50A1,SLAMF7,SEC14L1,SSR4,DAP,ANKRD37,PABPC4,KDELR2,SEC63,BCKDK,ARMCX3,SSR3,PLD3,KLF13,TMED9,ORAI2,ARL1,AKR1A1,TMEM258,SEC61G,TP53INP1,IFNAR1,CADM1,CD38,CTSH,CECR1,HM13,NUCB2,KLHL6,MBNL2,SEMA4A,HYOU1,WDR45,TSPAN3,ST6GAL1,CNPY2,CD79B,OSTC,HIST2H2AA4,TMEM39A,IFNAR2,ARF4,NANS,TMEM256,HIST1H2BK,DNAJC1,AKAP2,STT3A,PHPT1,ERGIC3,COPG1,RABAC1
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G3- Monocytes/Macrophages_PMID_30388456,Monocyte,MARCO,FPR3,CLEC5A,AQP9,CLEC10A,HNMT,OLR1,CD300E,ARHGEF10L,HK3,ANPEP,LGALS2,FCN1,GPR84,CCL2,CLEC4E,CSTA,TREM1,FCGR1B,TMEM176B,C19orf59,OSCAR,CYP2S1,STAB1,VCAN,FPR1,SERPINA1,TLR2,VSIG4,TMEM176A,VMO1,MAFB,FCGR1A,SLC37A2,CD14,TLR4,CD300LF,CXCL3,CD33,GPNMB,FOLR2,LILRA3,LPCAT2,TREM2,PLXDC2,CD163,RIN2,NFAM1,CD300C,IL1B,MSR1,LILRA6,ALDH3B1,CXCL2,C5AR1,ADAP2,IL8,C15orf48,MRC1L1,BST1,PLAU,SIGLEC9,MS4A4A,SIRPA,RNASE1,CPVL,PLBD1,LILRA2,SLC11A1,PYGL,HCK,LRP1,C1QC,LYZ,LRRC25,ADM,C1QA,APOBEC3A,ZNF385A,TGM2,TNFAIP2,CSF3R,SLCO2B1,LILRB2,SIGLEC7,TNS1,S100A9,RAB20,EPB41L3,C1QB,PTAFR,CD93,PRAM1,ST3GAL6,S100A8,IL1RN,SLC8A1,FBP1,LILRA1,ANKRD22,MNDA,LTBR,CARD9,CSF1R,IGSF6,FCGR2A,SPP1,C2,CLEC12A,KCTD12,APOC1,F13A1,SPI1,MT1G,CLEC7A,SLC1A3,LILRA5,CFP,MMP19,APOE,NCF2,CREB5,IRAK3,DMXL2,CFD,MS4A7,HBEGF,CSF2RA,MYOF,PMP22,FN1,THBD,SLC7A7,KIAA1598,DAPK1,LILRB3,FGD4,DAB2,RAB31,PLTP,SERPING1,RBM47,PTGS1,SLC15A3,CXCL16,PLAUR,ALDH2,TCN2,CST3,FCGR2C,CTSL,LILRB4,RAB13,CD36,KLF4,C1orf54,SLC31A2,AIF1,TNFSF13,GPX3,TFEC,TGFBI,SMPDL3A,MARCKS,QPCT,IL4I1,IL18,CD68,LST1,NPL,CD1D,C3AR1,KYNU,G0S2,PILRA,GSN,FCER1G,SLAMF8,TM6SF1,CD302,FES,AXL,CLEC4A,TSPAN4,CD86,SLC43A2,FGL2,RNF144B,NLRP3,FAM26F,RNF130,TYROBP,CYFIP1,CD9,IER3,ADAM9,ABCA1,SCIMP,RAB34,RASSF4
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G4- Dendritic cells_PMID_30388456,Dendritic cell,PTCRA,CLEC4C,KRT5,LAMP5,PLEKHD1,EPHB1,PLVAP,LILRA4,SLC12A3,SCAMP5,SCN9A,SMIM5,DNASE1L3,PPM1J,PTGDS,MAP1A,PTPRS,TPM2,PACSIN1,IL3RA,TNFRSF21,SERPINF1,PLD4,C1orf186,EGLN3,SMPD3,TLR9,PFKFB2,AC023590.1,SUSD1,NOTCH4,P2RY14,PALD1,TSPAN13,TLR7,IGJ,P2RY6,MYBL2,GAS6,CBFA2T3,DERL3,ZFAT,FAM213A,GAB1,GAPT,SPIB,NREP,ST3GAL4,CD36,NRP1,CHAF1A,RASD1,PHEX,PPP1R14B,CSF2RB,NEK8,APP,SOX4,FAM129C,ENPP2,P2RX1,LILRB4,MPEG1,AC010441.1,ADC,SRC,TMIGD2,TCL1A,TCF4,SLC15A4,SEMA7A,THBD,TEX2,CMKLR1,RNASE6,ABHD15,LGMN,GNG7,TTYH2,BCL11A,GRASP,SERPING1,TRAF4,MGLL,CTNS,AMIGO3,PMEPA1,CSF2RA,SULF2,VEGFB,CLIC3,TXNDC5,COBLL1,TGFBI,MGST2,UNC93B1,BLNK,MAP2K6,WDFY4,TNFSF13,CCDC50,CST3,ATF5,MZB1,C12orf45,ALDH2,IFNLR1,PTP4A3,FLNB,CCDC88A,KIAA0226L,SCARB1,PLXNB2,CD68,TRPM2,CD2AP,SPG20,ARID3A,LILRA5,DAB2,BAIAP2,ATP13A2,GALNT3,AFF3,SH2B3,RNF130,SLC41A2,FADS1,GNA15,ZDHHC17,CXorf21,GPM6B,UBE2E2,TYROBP,DAPK1,FCER1G,PHACTR1,CLN8,SIRPB1,MS4A6A,HDAC9,ARHGAP31,POLB,CYBB,CYB561A3,IGKC,SLC12A7,SPINT2,RECQL5,GSN,ITM2C,RRBP1,ST6GALNAC4,FCHSD2,ALG2,SCARB2,STAP1,MEF2C,CORO1C,UGCG,FUZ,RNF144B,C15orf39,MYO1E,PLAC8,KLF4,ZDHHC4,KCTD5,IRF8,IDH3A,EIF2AK4,SEPHS1,HVCN1,IFIT2,THEMIS2,SLC29A1,SYK,DHTKD1,PAPD7,TATDN3,ARHGAP24,LYN,SLC35A2,TAX1BP3,RUNX2,SMIM14,IGHM,RBM47,DAAM1,MYO15B,SLC2A6,TP53I11,CYSLTR1,FCGRT,TNFSF13B,KYNU,NPC2,TGFBR1,FAM65A,BTK
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G5- Lymphocytes_PMID_30388456,T cell,LMNA,ELL2,NR4A3,RALGAPA1,IL7R,FAM177A1,RNF125,PIK3R1,TIPARP,RGCC,FOSL2,MPZL3,SLC7A5,AIM1,TSPYL2,KDM6B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G6- Exhausted CD8 T cells_PMID_30388456,T cell,FASLG,VCAM1,CCL3,LAG3,CXCR6,IFNG,KLRC4,PDCD1,KLRD1,HAVCR2,CD8B,SIRPG,SNAP47,DTHD1,PRF1,GZMH,F2R,CD38,GZMK,CXCL13,CCR5,CCL4L2,KLRC4-KLRK1,MYO7A,JAKMIP1,CD8A,NKG7,GZMA,CHST12,CCL4,TOX,GZMB,CCL4L1,GIMAP6,CTSW,RAB37,TRGC2,CD27,GPR56,KLRK1,ABCA2,TIGIT,RGS3,OASL,DDX60,GPR174,SLAMF7,IKZF3,PVRIG,SIT1,UBASH3A,S100PBP,TNFRSF9,ZBP1,THEMIS,GPR171,SLAMF6,FCRL3,TRGC1,ADORA2A,GIMAP4,GBP5,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G7- Regulatory T cells_PMID_30388456,T cell,FOXP3,CCR8,TNFRSF4,ICA1,FBLN7,RTKN2,IL2RA,TNFRSF18,MAGEH1,MAF,ETV7,CD4,TBC1D4,IKZF2,DUSP16,ICOS,ZC3H12D,STAM,HS3ST3B1,CTLA4,TIAM1,TNFRSF25,GK,BTLA,BATF,CORO1B,SDC4,CD28,THADA,PHTF2,TMEM173,KLRB1,MICAL2,SLAMF1,SPOCK2,PBX4,PHACTR2,MBOAT1,FAS,RORA,PELI1,TNIK,LTB,GEM,TIGIT,DNPH1,UXS1,PBXIP1,NCF4,HTATIP2,CD5,ARID5B,TRAF3,RAB11FIP1,RHBDD2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G8- Cytotoxicity (Lymphocytes)_PMID_30388456,T cell,FGFBP2,FCRL6,TGFBR3,GNLY,SPON2,SAMD3,TRDC,KLRG1,GZMH,TRGC1,A2M,FCGR3A,GZMM,AOAH,GZMA,HOPX,KLRB1,NKG7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G9- Exhausted/HS CD8 T cells_PMID_30388456,T cell,VCAM1,KIR2DL4,TNFRSF9,GEM,CXCL13,NAB1,DFNB31,CADM1,CRTAM,GPR56,CTLA4,MYO7A,DUSP4,HAVCR2,TNFSF9,METRNL,DTHD1,CXCR6,CCDC64,PHLDA1,PDE3B,GZMB,LAG3,SLC7A5,KLRC4,PDCD1,NELL2,SNAP47,ENTPD1,CD8A,TTN,PRF1,CD8B,MCTP2,TOX,AHI1,GZMH,SYTL3,GOLIM4,PAM,KLRC4-KLRK1,LYST,SLA2,NKG7,RAB27A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G10- Memory T cells_PMID_30388456,T cell,LEF1,TCF7,SERINC5,IL7R,CCR7,TNFRSF25,S1PR1,PASK,FLT3LG,CAMK4,SORL1,DHRS3,TMEM63A,MGAT4A,LTB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma,30388456,G11- Lymphocytes exhausted/cell-cycle_PMID_30388456,T cell,SPC25,CDCA5,KIF15,CDC45,DLGAP5,HIST1H3G,KIF18B,RRM2,UBE2C,HJURP,ESCO2,SPC24,BIRC5,CDC6,CDCA8,AURKB,ZWINT,CDCA2,GTSE1,DTL,RAD51,CDCA3,MELK,CKAP2L,ANLN,ASF1B,TYMS,NCAPG,TK1,PKMYT1,KIFC1,KIAA0101,CCNB2,DEPDC1B,CDC20,TROAP,CLSPN,ASPM,GINS2,KIF23,KIF2C,RAD51AP1,NUF2,SHCBP1,TOP2A,CDK1,MKI67,MLF1IP,PLK1,DHFR,KIF11,CENPW,TPX2,CASC5,CDKN3,CCNA2,BUB1B,MCM2,UBE2T,BRCA1,MCM4,GGH,TCF19,BUB1,HMGB3,ECT2,FEN1,WDR34,NCAPG2,CCNB1,ORC6,CHEK1,SGOL1,CENPH,CENPF,MAD2L1,SPAG5,NCAPH,CCNF,CENPE,RFC3,FANCI,CENPM,CDCA7,TIMELESS,FBXO5,PRC1,RNASEH2A,SMC2,STMN1,AURKA,RACGAP1,HIST1H2AM,APOBEC3B,BRCA2,ATAD5,CENPN,HIRIP3,CKS1B,NDC80,WDR76,RFC5,RFC4,CHTF18,CDK2,GMNN,NUSAP1,FANCG,ACOT7,MXD3,CENPK,LRR1,TMEM106C,KIF18A,DSN1,NCAPD2,PCNA,CENPL,NUDT1,NRM,LIG1,TEX30,POLD1,DTYMK,KNTC1,MCM3,CDCA4,ATAD2,MCM7,POLD3,PAICS,HAUS8,SHMT1,C19orf48,NCAPD3,POLA2,PHF19,POLE,TUBG1,RRM1,LMNB1,BLM,YEATS4,DUT,TFDP1,PRIM1,SNRNP25,HIST1H4C,NDC1,TTF2,DNAJC9,POP7,MCM6,RFC2,ACAT2,HIST1H1D,VRK1,MT1E,RPA3,HELLS,ARHGAP11B,DDX11,RAD51C,PTTG1,H2AFX,BARD1,FANCD2,KIF22,MSH2,MMS22L,GGCT,UNG,RBBP8,USP1,WHSC1,SSRP1,NUP37,NME1,MAGOHB,CDK4,CCDC167,PAFAH1B3,RFWD3,HADH,ACTL6A,KIF20B,NABP2,SCCPDH,DCTPP1,PSMG1,NCAPH2,ICMT,TMEM194A,MCM5,MTHFD1,ACYP1,MASTL,LSM5,SAE1,ITGB3BP
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,B cells_PMID_24138885,B cell,MS4A1,TCL1A,MS4A1,TCL1A,HLA-DOB,PNOC,KIAA0125,CD19,CR2,IGHG1,FCRL2,BLK,IGHG1,COCH,OSBPL10,IGHA1,TNFRSF17,ABCB4,BLNK,GLDC,MEF2C,MEF2C,IGHM,FAM30A,SPIB,BCL11A,GNG7,IGKC,CD72,MICAL3,BCL11A,BACH2,IGL@,CCR9,QRSL1,DTNB,HLA-DQA1,SCN3A,QRSL1,SLC15A2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,T cells_PMID_24138885,T cell,PRKCQ,CD3D,CD3G,CD28,LCK,TRAT1,PRKCQ,BCL11B,CD2,LCK,TRBC1,TRBC1,TRA@,ITM2A,SH2D1A,CD6,CD96,NCALD,GIMAP5,TRA@,CD3E,SKAP1,TRA@,TRA@,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,T helper cells_PMID_24138885,T cell,ICOS,LRBA,ITM2A,FAM111A,PHF10,NUP107,SEC24C,NAP1L4,BATF,ASF1A,FRYL,FUSIP1,TRA@,TRA@,RPA1,UBE2L3,ANP32B,DDX50,C13orf34,PPP2R5C,SLC25A12,ATF2,CD28,GOLGA8A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Tcm_PMID_24138885,T cell,CDC14A,ATM,USP9Y,PCNX,ATM,FOXP1,KLF12,ST3GAL1,INPP4B,CASP8,MLL,PCM1,RP11-74E24.2,PHC3,NFATC3,LOC202134,TIMM8A,ATF7IP,REPS1,PSPC1,RPP38,HNRPH1,STX16,CYLD,SNRPN,TRAF3IP3,NEFL,POLR2J2,AQP3,CG030,PDXDC2,CLUAP1,DOCK9,CYorf15B,CREBZF,CEP68,TXK,SLC7A6,FYB,MAP3K1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Tem_PMID_24138885,T cell,TRA@,PRKY,VIL2,GDPD5,CCR2,MEFV,C7orf54,FLI1,TBC1D5,DDX17,AKT3,EWSR1,TBCD,CCR2,NFATC4,LTK,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Th1 cells_PMID_24138885,T cell,IFNG,LTA,APBB2,DOK5,IL12RB2,APBB2,APOD,ZBTB32,CD38,CSF2,CTLA4,CD70,DPP4,EGFL6,BST2,DUSP5,LRP8,IL22,DGKI,CCL4,DPP4,GGT1,LRRN3,SYNGR3,ATP9A,BTG3,CMAH,HBEGF,SGCB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Th2 cells_PMID_24138885,T cell,PMCH,AHI1,PTGIS,AHI1,CXCR6,EVI5,AHI1,IL26,MB,NEIL3,GSTA4,PHEX,SMAD2,CENPF,ANK1,ADCY1,AI582773,LAIR2,SNRPD1,CXCR6,MICAL2,DHFR,SMAD2,WDHD1,BIRC5,DHFR,SLC39A14,HELLS,LIMA1,CDC25C,CDC7,GATA3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,TFH_PMID_24138885,T cell,CHI3L2,CXCL13,MYO7A,CHGB,MYO7A,ICA1,HEY1,CDK5R1,ST8SIA1,PDCD1,BLR1,KIAA1324,PVALB,ICA1,TSHR,C18orf1,HEY1,TOX,BLR1,SLC7A10,SMAD1,POMT1,PASK,MKL2,PTPN13,PASK,KCNK5,C18orf1,ZNF764,MAF,MYO6,SIRPG,THADA,THADA,MAGEH1,B3GAT1,MAF,SH3TC1,HIST1H4K,STK39,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Th17 cells_PMID_24138885,T cell,IL17A,IL17RA,RORC,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,TReg_PMID_24138885,T cell,FOXP3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,CD8 T cells_PMID_24138885,T cell,CD8B,CD8A,CD8B,PF4,PRR5,SF1,LIME1,DNAJB1,ARHGAP8,GZMM,SLC16A7,SFRS7,APBA2,C4orf15,LEPROTL1,ZFP36L2,GADD45A,ZFP36L2,MYST3,ZEB1,ZNF609,C12orf47,THUMPD1,VAMP2,ZNF91,ZNF22,TMC6,DNAJB1,FLT3LG,CDKN2AIP,TSC22D3,TBCC,RBM3,ABT1,C19orf6,CAMLG,PPP1R2,AES,KLF9,PRF1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Tgd_PMID_24138885,T cell,TRD@,TARP,C1orf61,TRGV9,CD160,TARP,FEZ1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Cytotoxic cells_PMID_24138885,T cell,KLRD1,KLRF1,GNLY,GNLY,CTSW,KLRB1,KLRD1,KLRK1,NKG7,GZMH,KLRD1,SIGIRR,ZBTB16,RUNX3,APOL3,RORA,APBA2,SIGIRR,WHDC1L1,DUSP2,GZMA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,NK cells_PMID_24138885,NK cell,LOC643313,GAGE2,ZNF747,XCL1,XCL2,AF107846,SLC30A5,NM_014114,MCM3AP,TBXA2R,CDC5L,LOC730096,FUT5,FGF18,MRC2,RP5-886K2.1,SPN,PSMD4,PRX,FZR1,ZNF205,AL080130,ZNF528,MAPRE3,BCL2,NM_017616,ARL6IP2,SPN,FZR1,PDLIM4,NM_014274,LDB3,ADARB1,SMEK1,TCTN2,TINAGL1,IGFBP5,ALDH1B1,NCR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,NK CD56dim cells_PMID_24138885,NK cell,KIR3DL2,SPON2,KIR2DL3,GZMB,KIR3DS1,KIR3DL1,FLJ20699,TMEPAI,KIR3DL2,IL21R,KIR3DL2,KIR3DL3,KIR2DS5,KIR2DS2,GTF3C1,KIR2DS1,EDG8,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,NK CD56bright cells_PMID_24138885,NK cell,DUSP4,RRAD,XCL1,PLA2G6,PLA2G6,NIBP,FOXJ1,DUSP4,PLA2G6,MADD,BG255923,MPPED1,MUC3B,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,DC_PMID_24138885,Dendritic cell,CD209,CCL17,HSD11B1,CCL13,CCL22,PPFIBP2,NPR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,iDC_PMID_24138885,Dendritic cell,CD1B,VASH1,F13A1,CD1E,MMP12,FABP4,CLEC10A,SYT17,MS4A6A,CTNS,GUCA1A,CARD9,CD1E,ABCG2,CD1A,PPARG,RAP1GAP,SLC7A8,GSTT1,NM_021941,FZD2,CSF1R,HS3ST2,CH25H,LMAN2L,SLC26A6,BLVRB,NUDT9,PREP,TM7SF4,TACSTD2,CD1C,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,aDC_PMID_24138885,Dendritic cell,CCL1,EBI3,INDO,LAMP3,OAS3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,pDC_PMID_24138885,Dendritic cell,IL3RA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Eosinophils_PMID_24138885,Eosinophil,IL5RA,KCNH2,TKTL1,IL5RA,EMR1,KCNH2,CCR3,ACACB,THBS1,GALC,TKTL1,RNU2,CLC,THBS1,HIST1H1C,CYSLTR2,HRH4,RNASE2,CAT,LRP5L,SYNJ1,SYNJ1,THBS4,GPR44,KBTBD11,HES1,ABHD2,TIPARP,SMPD3,MYO15B,TGIF1,RRP12,ACACB,IGSF2,HES1,RCOR3,EPN2,C9orf156,SIAH1,ACACB,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Macrophages_PMID_24138885,Macrophage,MARCO,CXCL5,SCG5,SULT1C2,SULT1C2,MSR1,CTSK,PTGDS,COLEC12,GPC4,MSR1,PCOLCE2,CHIT1,PTGDS,KAL1,CLEC5A,GPC4,ME1,DNASE2B,CCL7,FN1,CD163,GM2A,SCARB2,BCAT1,BCAT1,RAI14,MSR1,COL8A2,CD163,APOE,CHI3L1,ATG7,CD84,FDX1,MS4A4A,SGMS1,EMP1,CYBB,CD68,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Mast cells_PMID_24138885,Mast cell,PRG2,CTSG,TPSAB1,SLC18A2,TPSAB1,MS4A2,CPA3,TPSB2,TPSAB1,NM_003293,TPSAB1,MS4A2,TPSAB1,GATA2,HDC,LOH11CR2A,SIGLEC6,ELA2,LOH11CR2A,CMA1,SIGLEC6,PGDS,MLPH,ADCYAP1,SIGLEC6,SLC24A3,CALB2,SLC24A3,KIT,TAL1,ABCC4,PPM1H,MAOB,HPGD,SCG2,PTGS1,CEACAM8,MPO,NR0B1,LOC339524,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer,24138885,Neutrophils_PMID_24138885,Neutrophil,CSF3R,CYP4F3,VNN3,FPRL1,KCNJ15,MME,IL8RA,IL8RB,MME,FCGR3B,DYSF,KCNJ15,FCAR,FCAR,CEACAM3,FPRL1,HIST1H2BC,HPSE,FLJ11151,CREB5,S100A12,FCGR3B,TNFRSF10C,SLC22A4,KIAA0329,SLC25A37,BST1,FCAR,CEACAM3,CRISPLD2,TNFRSF10C,G0S2,SIGLEC5,CD93,MGAM,ALPL,FPR1,CD93,PDE4B,LILRB2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Temporal and spatial atlas of eosinophil specialization across tissues,41514064,Human_Neutrophil_hNeutrophils_PMID_41514064,Neutrophil,PI3,CXCL8,G0S2,CXCR2,S100A8,FCGR3B,IL1R2,PROK2,IFITM2,CSF3R,TREM1,AL034397.3,AC245128.3,OSM,IVNS1ABP,IL1RN,BCL2A1,S100P,S100A9,S100A12,FFAR2,HCAR3,VNN2,HCAR2,FPR1,CMTM2,NAMPT,CXCR1,LRG1,TNFAIP6,PHACTR1,ADM,CLEC4E,KATNBL1,DGAT2,LCP2,FPR2,GCA,PLEK,CXCL1,AQP9,AL356273.3,USP10,SLPI,CCRL2,SOD2,ALOX5AP,MXD1,MMP25,IER3,LIMK2,PPIF,SMIM25,CYSTM1,FOS,LINC01001,MME,SAT1,ADGRG3,MTHFS,AC023157.3,CEBPB,CDA,CCL4L2,CYP4F3,FLOT1,IRAK2,MAP1LC3B,LITAF,IL1A,RILPL2,LINC01506,CLEC4A,ANP32A,TRIB1,XPO6,DUSP1,TNFRSF1A,MBOAT7,KCNJ15,ACSL1,TDP2,RIPOR2,RALGDS,ATP2B1-AS1,UBE2B,CPD,BASP1,PADI4,DOK3,MAP1LC3B2,C15orf48,H3F3A,ETS2,IFIT3,NSMAF,LRRK2,RNF24,MSRB1,FGR,FTH1,MID1IP1,VASP,HDGFL3,MNDA,CASS4,APOBEC3A,PTEN,GPR84,LILRB3,PHF20L1,MARCKS,PELI1,BRI3,TMEM140,ADORA2A,PNRC1,SIRPB1,NEAT1,CMTM6,GABARAPL2,GMFG,TNIP1,ARHGAP26,TMCC3,ESRRG,RGL4,MCOLN1,SBNO2,TLR2,LYN,MGAM,MIR3945HG,PPP1R18,FRMD4B,MCEMP1,PITPNA,IFRD1,PGS1,BCL6,RABGEF1,ZNF267,SEC14L1,DCUN1D3,PLAU,NINJ1,IL1RAP,CHMP2A,C5AR1,VSIR,TSEN34,NOP10,SLC11A1,DDX60L,LAMB3,IL18RAP,SPINK1,KMT2B,GPSM3,FAM49B,IL1B,ATG2A,RFLNB,TALDO1,ZDHHC18,B3GNT5,HCLS1,IRAK3,CDKN2D,TAGAP,PLAUR,C3AR1,MALAT1,EFHD2,ELL,ARRB2,AC015912.3,NCF1,UBXN2B,TMEM71,ACTN1,SCARF1,CREB5,TTPAL,TBC1D7,EXOSC4,SRGN,NCF2,TLR4,H3F3B,DOCK5,LPCAT1,AC012368.1,NUMB,TOM1,SECTM1,PDLIM7,VNN3,LCP1,TNFRSF10C
Temporal and spatial atlas of eosinophil specialization across tissues,41514064,Human_Neutrophil_hNK cells_PMID_41514064,Neutrophil,GNLY,KLRD1,PRF1,KLRF1,FGFBP2,NKG7,B3GNT7,XCL2,SH2D1B,ADGRG1,SPON2,KIR2DL4,GZMA,TRDC,S1PR5,KIR2DL3,KLRC1,HOPX,CD247,IL2RB,CTSW,NCR1,CD7,TRGC2,CD160,NCAM1,AUTS2,KIR3DL2,CST7,KLRK1,CX3CR1,KRT81,CMC1,TBX21,YPEL1,ABCB1,FASLG,SYTL3,AKNA,CEP78,GZMH,KRT86,C1orf21,OSBPL5,AKR1C3,CCL5,PRSS23,CCL4,TMIGD2,MATK,KIR3DL1,KLHL23,MCTP2,SH2D2A,KLRB1,SLA2,RAB29,PAPD5,SCX,FCRL6,MYBL1,VPS37B,PCID2,XCL1,MAPRE2,KIR2DL1,USP28,APMAP,KCTD10,C5orf56,PRKACB,AC092821.3,TRGC1,C16orf54,KLRC2,HELZ,AL359962.2,MEX3C,CNOT2,GTF3C1,TGFBR3,TXK,PIP4K2A,PIK3R1,DLL1,LINC01764,PTPN4,APOBEC3G,ABHD17A,ITGAE,PYHIN1,SAMD3,TBC1D31,OTULIN,ITGA1,GCH1,BIN2,CBLB,ZBTB1,SUN2,ADGRE5,ACSS1,GNG2,SACM1L,FAM43A,LINC01232,PDZD4,BPGM,MSN,TES,PTGER2,GFOD1,MLC1,MINDY2,METRNL,ABL1,MACF1,ARF6,EPG5,TKTL1,NSD1,RUNX3,CD244,AC104695.3,SPRY1,DIP2A,STARD3NL,ZAP70,CCNT1,HCST,PITPNC1,DLG5,RNF125,PPP2R5A,MVD,AFAP1L2,AOAH,TMEM2,PLEKHA1,COMMD7,ALG12,SIK3,TNFRSF18,PSMB8-AS1,AL359220.1,TRG-AS1,CLASP1,CTBP1,FAM177A1,PTGDR,AGK,IFFO2,NMUR1,MCM7,SLC38A1,GIMAP6,SYNE1,BCR,RAP1B,LINC01871,RNF115,IL12RB2,IGFBP7,APBA2,WIPF1,GTPBP8,PDGFD,SSH1,APOL6,FLNA,PSME4,RTL6,ZC3H18,DCAF16,KIF21B,RAB8B,CRIM1,TTC38,DHRS3,CREBZF,AC245297.3,RPA1,PPP1R12A,DOK2,GOLGA8N,TOX,ABLIM1,SPRY2,IQGAP2,KANSL1,ZNF655,RNF166,FSD1,GRAMD2B,PPP1R9A,ITGAL,RGS3,YES1,P2RY8,BMP2
Temporal and spatial atlas of eosinophil specialization across tissues,41514064,Human_Neutrophil_hNeutro1_PMID_41514064,Neutrophil,PADI4,MMP9,S100A12,HBB,ARG1,FCN1,CKAP4,CDA,HMGB2,VIM,PLBD1,APMAP,S100P,RGL4,IL18RAP,AC245128.3,AGFG1,ADD3,CLEC4D,CRISP3,CALM1,MARC1,RFLNB,LINC02207,C1orf162,S100A8,PGLYRP1,KIF1B,TFDP1,FOSL1,VNN1,TSPO,ID3,ADAM19,PRKAR2A,PGD,PSTPIP2,FBXW2,OSBPL9,AC068473.5,S100A4,HIPK2,PRNP,GYG1,AL034397.3,SLC36A4,PADI2,EIF4G2,HK3,RBP7,TMCC3,CRISPLD2,NR4A3,CLC,DBNL,RBL2,MANSC1,BMX,SYTL3,PFKFB2,MAEA,PPP2R5A,S100A9,DHCR7,STK38L,CLEC12A,YWHAB,SDF2,CTDSP1,RAB27A,SBNO2,S100A6,MAST3,WASF2,AL021707.6,MAP3K5,RSBN1,PELO,LAMTOR5,SORT1,CAP1,ATM,IL1R2,STK38,SYNE2,FKBP9,LINC00694,SEPT9,ATP11B,STK17B,TLE3,C19orf38,TUBA4A,CTDP1,MYL6,DOK3,ROCK1,PINK1,ACSL1,CSTA,FOXP1,TRIQK,PTPN7,HIST1H1C,CD55,ARHGAP30,CORO1A,GPR27,C17orf107,MICAL1,CAPNS1,FKBP5,TES,PLP2,ANPEP,VCL,ZNF467,JOSD1,KIAA0040,CYP4F3,SAMSN1,GRK6,ITPRIP,PHF20L1,IRAK3,RIOK3,VWA8,RABGEF1,MCL1,KLF6,OXSR1,TP53I11,HIRA,NEO1,HIST2H2BE,ZNF281,LINC00937,CD93,STOM,FAR1,MAPK14,INPP5D,SEPT5,HBA2,SH3BP5L,CHPT1,MGAM,FRMD4B,TOR4A,GTF2I,RNF167,MSRA,MME,PNPLA2,NTNG2,AREG,SEC62,TNFRSF12A,MYH9,WDR1,TUBA4B,ACAP1,IQSEC1,GLCCI1,BEST1,COX4I1,MSRB2,TESC,BST1,TMEM91,CTBP1,VAPA,ACSL3,SH3BGRL3,FBXL5,ITGB2,TPM3,USP9X,ABHD17C,C16orf72,TMED8,HELZ,PHTF1,USP10,MFSD1,GPR160,MYO5A,EMB,DGKD,TAZ,NFE2,HAL,AC118758.3,UBR1,LYZ,DAPK2,SRSF9,SRBD1,CDADC1,EIF4EBP2
Temporal and spatial atlas of eosinophil specialization across tissues,41514064,Human_Neutrophil_hNeutro2_PMID_41514064,Neutrophil,ISG15,RSAD2,IFIT2,IFIT3,IFIT1,XAF1,HERC5,OASL,MX1,PARP14,IFI6,UBE2L6,PML,RNF213,IRF7,IFI44L,GBP5,OAS2,GBP4,TMEM123,ANKRD22,STAT2,EIF2AK2,SAMD9,TNFSF10,STAT1,OAS3,SAMD9L,DDX60L,SERPING1,TRIM22,IFIT5,IFIH1,EPSTI1,GBP1,NT5C3A,BATF2,NUB1,IFITM3,CMPK2,BST2,ERAP2,SAMHD1,PARP9,APOL6,DDX58,TAGAP,SPTA1,TRIM21,PHF11,IRF1,IFI44,GLRX,PARP12,C5orf56,ZBP1,AC087672.3,HES4,LYSMD2,U62317.5,LACTB,LY6E,TNFSF13B,RBBP6,PSMB9,ZNFX1,HSH2D,NCOA7,MICB,TRAFD1,IFI16,ATF5,IFI35,HERC6,DNAJB12,FFAR2,C8orf49,ARFGEF2,TAP1,SCARB2,IFITM1,REC8,DHX58,CNOT8,TRAPPC13,LINC01840,NEURL3,PRELID2,ACOT9,DDX60,SP110,NPFFR1,ABCB9,FEZ2,PLSCR1,MT2A,XRN1,GLB1L,GEMIN8,MGA,SQOR,FCGR1A,C19orf66,TOR1B,CASP1,HNRNPLL,SP100,AC009404.1,KLK2,TRIM14,SSB,TRIM38,TAP2,MX2,USP21,NMI,ADAR,TDRD7,HEXDC,PAK3,PRKAG2,CD274,ISG20,P2RY14,CD38,OR14J1,TNFAIP6,CNDP2,LAP3,HELZ2,KARS,LMF2,GTF2H3,PSME2,PPM1K,TMSB10,OAS1,SRGAP2,CMTR1,TFEC,DST,EML2-AS1,MEF2A,AC067863.2,CHMP5,MOB3C,AC023632.2,PCOLCE,FN1,ATP23,IGHG2,SETD5,SAT1,CCDC18-AS1,CACNG8,CNP,DNAJC5B,PRDM1,ABCA2,SEC22A,SECTM1,GIMAP4,EPS8,PIM3,ENPP5,N4BP1,UNC50,TBK1,DAPP1,ICAM1,SPPL2A,FCGR2A,SEPT14,PHLDA3,TRANK1,UCHL1,CEPT1,SLC25A42,FYB1,HLA-C,PSME1,SINHCAF,HLA-A,FFAR3,HLA-E,ALMS1,HLA-B,APOBEC3A,DNAAF1,CXCR4,,,,,,,,,,
Temporal and spatial atlas of eosinophil specialization across tissues,41514064,Human_Neutrophil_hNeutro3_PMID_41514064,Neutrophil,ARHGEF40,CDC42EP2,CPPED1,CXCR2,MPZL1,CFD,SNUPN,CASC3,AMPD2,VMP1,NCOA4,JAML,RASSF3,MICAL2,FRAT2,NCOA1,EGLN1,CCR4,GLT1D1,FAM129A,MPPE1,PIGX,OAZ2,BTN3A1,SELPLG,LINC01506,ALPL,CASS4,IDS,NDE1,RN7SL455P,VPS35,SH2B2,RALBP1,PECAM1,HOTAIRM1,LINC01460,TAGLN2,STIM1,BACE1,PPM1F,HIST1H2BC,ALAD,KIAA2013,AKNA,TSC22D3,LRRC4,TPR,AC012368.1,LARP1B,LINC02555,AC090921.1,ITM2B,TUBA1B,ITPK1,TNRC6B,EIF1AY,SNX6,KLRG1,CENPF,ARNTL,POLB,R3HDM4,DPYSL5,NUDT16,AC012645.4,ZC3H7B,ST3GAL1,ZNF236,CAPN15,PTPRC,NSFL1C,RUNX2,LINC02242,SDE2,FAM212B,HLA-DQB1,JMJD1C,SPATA13,KRT23,GNG10,FOXN3,FRY,GKAP1,TLR1,AC026401.3,DHRS12,COL18A1,CYBRD1,PPIA,FAM157C,NCAM1,THG1L,MYO1F,TXNIP,ST8SIA4,ST3GAL4,SLC8A1,CD302,CYTH4,CCNDBP1,AC080011.1,CSF2RB,CBX1,YPEL3,HIPK3,PGM5,ELMO1,CHI3L1,SEC14L1,AL035425.3,WIPF1,SRF,XKR8,THOC5,TNFRSF10C,FAM160B1,CSF3R,MDM1,UBE2R2,CCNJL,CXCR1,TACC1,BTG2,ING3,AC011472.2,KPNB1,AC027290.2,RSBN1L,RNASET2,CTDSPL2,SELENOK,GLUL,ATG16L2,AL021707.7,GLIPR2,MAPK10,AMMECR1L,TNFRSF13B,ACTN4,CCNC,IFITM2,MNDA,GFOD2,SMCHD1,LILRB2,FOXRED2,CEBPD,HVCN1,NFE2L2,AP000487.2,NFAM1,SLC25A37,RICTOR,GOLGB1,CREB5,SIPA1L1,F2RL1,NXPE3,UBA1,RGS2,TP53INP2,H2AFZ,MSN,JPT1,PACSIN2,FAXDC2,VNN2,ZDHHC18,HRH2,P2RY13,BIN3,NR1H2,CHSY1,LMO4,SHROOM1,PPP1CB,YPEL5,ZNF70,ADGRE5,MBOAT7,C1RL-AS1,THEMIS2,FAM53C,SORL1,TLR8,SLC44A2,BBX,AIF1,MED13L,,,,,,,,,,
Temporal and spatial atlas of eosinophil specialization across tissues,41514064,Human_Neutrophil_hNeutro4_PMID_41514064,Neutrophil,HLA-DRA,DDX3Y,ARRB1,HLA-DRB1,NR4A2,RHOH,CTSC,ATP1B3,RBM3,SERPINB9,ARL6IP5,CALHM6,PPIF,SIGLEC10,RNF141,ISG20L2,ATP1A1,KMT5A,CAND1,SPIDR,CLEC4A,IVNS1ABP,CCL4L2,ETV5,GK-IT1,CD74,CYTOR,IL1RAP,ZBTB8OS,AC016831.1,ROBO1,SLC7A5,LINC02078,FCGR2B,LCP2,CLEC7A,TRAF3IP2,TUFM,PYCR2,AC068473.3,SCAMP1-AS1,EIF4A3,AL136295.7,TNFAIP3,UBE2W,BIRC3,HIC1,SUN2,MIR4435-2HG,LTBR,IRF2BP2,AC020916.1,GREM1,SPRTN,ITGAX,MEF2C,EPHA1,NGLY1,CDC42EP3,CMTM6,DNAJC24,FAM126A,JUNB,RNASEH2B,CYBB,EHD1,PPT1,MPEG1,CEBPB,ARHGAP18,TMEM209,SPAG9,NFKBIA,ADGRE2,CD69,GZF1,BRDT,SBDS,SPP1,HDGF,Metazoa_SRP,SCARF1,IL1B,LST1,NFKBIE,USP36,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Temporal and spatial atlas of eosinophil specialization across tissues,41514064,Human_Neutrophil_hNeutro5_PMID_41514064,Neutrophil,PI3,SPINK1,MT1G,FNIP2,IL3RA,CSTB,LGALS3,CAST,PLPP3,SLPI,AC015912.3,TPRA1,GPR84,CSF1,CCL3,SNAPC1,TNFSF15,RMND5A,CCDC93,GNPDA1,ATP6V1C1,NPC1,RHEB,GBE1,TGM3,APLP2,TGM2,DARS,ATP6V1F,USF2,TMEM251,CNST,UQCRC2,BNIP3L,SEC22B,TRGC2,CCL20,IRAK1,ZNF438,ID2,JUN,C12orf49,TPI1,TRIM33,TBC1D7,CCL2,CDCP1,IRAK2,CORO1C,AL031316.1,PKM,GLMP,ATP6V1G1,MIF,RRAGD,SGSH,SSR2,GSTO1,PLEKHB2,TRPM2,DENND5A,GABARAPL2,TXN,OTOA,TMED10,MGAT1,MFSD2A,MGLL,HMOX1,VPS18,BRI3,ATP6AP1,PDXK,SLC43A3,ZNF316,FKBP15,NPL,MIR222HG,KCNAB2,STRBP,ANKRD12,RALGDS,KRCC1,FNDC3A,ZFAND5,HSPA1A,ACVR1B,OSTM1,SLC11A2,MAFG,KLHDC8B,YBX1,CD48,DNAJB1,MAPK6,PHLDA1,AMDHD2,CD83,CLCN7,NARS,BPIFA1,AGAP3,BCL2L1,PLEKHA2,FAM50A,LAGE3,MAP1LC3B,GPR108,GBA,DNAJC8,GNA15,CD300A,ARL8B,CELF1,AHI1,COPZ1,EIF1B,RAB7A,P4HA1,IL18BP,EDN1,ASAH1,HPCAL1,HK2,EAF1,ERBIN,GPCPD1,AC008770.1,NRIP3,ERO1A,ITPR1,ATP6V1D,ERRFI1,AC079209.1,FAM210A,BHLHE40,TMED9,DARS-AS1,BAG3,NDRG1,PRKCH,UBC,KLHL24,ZFYVE16,ZSWIM8,SEPHS2,ATP6V1B2,PSMA7,CHMP4B,SGK1,HSPA1B,CHKA,HSPH1,PLK2,GIGYF2,MARCKS,PIP4P1,TMEM258,SLCO4A1,C19orf53,DDX39B,NEU1,NLN,HEXA,RBM17,AC087741.1,TRAF3,FTL,ACAT2,WASHC5,TXNRD1,KLF2,NACA,LINC02154,PFDN1,GPD2,TMEM158,NR1D1,SERINC2,RNF181,WSB2,RAN,ARFIP1,SLC22A18AS,PIM1,CYSTM1,ARHGEF2,JAKMIP2,TBC1D2,HNRNPC,AFF4,FNDC3B,SBNO1,INHBA,AC009021.1,ATP2B1-AS1,SLC26A11,XIAP,RYBP,FGR
Temporal and spatial atlas of eosinophil specialization across tissues,41514064,Human_Neutrophil_hNK1_PMID_41514064,Neutrophil,S1PR5,KIR2DL3,KLRF1,PRF1,NKG7,KIR3DL2,SPON2,KLRD1,KIR2DL1,TBX21,CEP78,ADGRG1,CX3CR1,AC092821.3,PTGDR,MLC1,CCL4,NCR1,GNG2,MYBL1,KRT72,SUN2,YPEL1,AKNA,SAMD3,PYHIN1,CMC1,USP28,AC104695.3,IFFO2,AC006033.2,SIK3,SNAI3,TKTL1,PDGFD,AL499616.1,ZNF571,LINC01764,FCRL6,ARL4C,RAB29,MEX3C,TSPAN32,P2RY8,APBA2,COLQ,ADGRE5,ZAP70,SH2D2A,METRNL,SYTL3,KLRB1,DGKK,PTGER2,RNF115,SLC4A10,ABHD17A,GTF3C1,KIR3DL1,TRGV9,C16orf54,XCL1,ZBTB44,LINC01020,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Temporal and spatial atlas of eosinophil specialization across tissues,41514064,Human_Neutrophil_hNK2_PMID_41514064,Neutrophil,KRT81,KIR2DL4,GZMA,GNLY,KLRC1,TMIGD2,B3GNT7,TRDC,PCID2,IL2RB,ADAMTS17,CD160,SCML4,KLRC2,AL359962.2,CD7,CD247,ATP8B4,AC079331.1,SLC10A2,AC002076.1,AFAP1L2,COL23A1,FSD1,OXNAD1,KLRC4,RASA1,SLA2,LINC01232,HCG18,HELZ,MIR9-3HG,DHRS3,KANSL2,NLRC3,ASTE1,SH2D1B,CHRM3-AS2,AUTS2,PPM1B,CDH17,CASD1,ADO,ARF6,ACSS1,RAB3GAP1,NAALADL1,RAP1GDS1,DOK2,NCAM1,AC005332.8,AL031056.1,CCNJL,SEMA6A-AS2,LINC00539,GTPBP8,RHEBL1,ARHGEF7,SETX,XCL2,SPINK2,SLC25A15,PROSER1,NCR3,HIP1R,PPP1R1C,AL353898.3,RHOF,STK26,CCL5,PLCG2,AC007423.1,TXK,CCR9,EVL,GPR55,LINC01882,DBN1,ZNF853,ZNF454,AL359513.1,ABCB1,AC025465.2,KLRK1,GPR68,RTL6,PIP4K2A,PPP1R9A,AL096870.2,MCHR2,SLC35D1,T,AC139530.1,BIN1,KLHL23,ASB3,ZCCHC2,PDZK1,MADD,ZNF227,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_Neutrophils_PMID_38871184,Eosinophil,FCGR3B,G0S2,CSF3R,CXCL8,AQP9,SOD2,C5AR1,VNN2,MNDA,TREM1,CXCR2,FPR1,PLEK,LRRK2,SELL,IL1B,NCF2,CTSS,S100A9,LYZ,IFITM2,NEAT1,SERPINA1,ACSL1,NAMPT,S100A8,IGF2R,TNFRSF10C,FCN1,MME,MXD1,FCGR3A,BASP1,TLR2,IFIT2,FCGR2A,TNFAIP2,PHACTR1,LYN,HCAR3,CXCR1,MYO1F,RIPOR2,PTPRE,SLC25A37,RGS2,SORL1,PILRA,PROK2,LYST,KCNJ15,RNF149,SAT1,IVNS1ABP,PLAUR,IGSF6,SLC43A2,CLEC7A,FPR2,MMP25,TLR4,TMEM154,EVI2B,CD93,IFI30,IFIT3,GBP5,GCA,NCF1,ZDHHC18,SLC11A1,LITAF,MX2,MARCKS,ABTB1,SEC14L1,FFAR2,FCAR,CCR1,SPI1,STEAP4,CHI3L1,PPIF,SMCHD1,HCK,IL1RN,CLEC4E,ITGAX,ICAM3,NADK,TNFRSF1B,VSIR,NABP1,JAML,BCL2A1,TNFAIP6,TYROBP,PTAFR,MGAM,ACTN1,MPEG1,FGR,MALAT1,RAB31,THEMIS2,CD14,PXN,AIF1,LST1,CDA,RESF1,TLR1,CFD,MEGF9,MBOAT7,CFP,CRISPLD2,IL1R2,CPPED1,CD55,IFITM3,TMCC3,FGL2,PDE4B,LCP1,ZYX,GBP2,CD53,SIRPB1,MSRB1,GPSM3,LILRB2,ATP6V1B2,RILPL2,SLA,APLP2,VNN3,DOCK5,TRIB1,MEFV,CFLAR,NLRP1,DGAT2,ITGB2,LIMK2,ATP2B1-AS1,BRI3,PTEN,STX3,VASP,NFKBIA,VMP1,LCP2,FCGRT,LUCAT1,OSM,R3HDM4,IL17RA,EFHD2,HLA-C,CASS4,PIK3AP1,FTH1,NIBAN1,BCL6,XPO6,FYB1,SSH2,MID1IP1,PLEKHO2,IL6R,CYRIB,ADM,ITM2B,BID,ARRB2,DENND3,CHST15,SECTM1,KLF2,CNN2,AMPD2,CR1,HSD17B11,SKAP2,YPEL3,IER3,LPCAT1,LRRC25,ICAM1,IQSEC1,TALDO1,TMEM71,OGFRL1,C15ORF39,ZNF267,RASSF2,HLA-E,DDX60L,SPAG9
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_CD8 T cells_PMID_38871184,Eosinophil,CD8A,CCL5,ITGA1,AUTS2,PDE4D,TRBC2,CXCR4,CD96,IL7R,YPEL5,PPP1R16B,CD3D,ZFP36L2,CD3G,SPOCK2,CD7,CD3E,SLA2,CNOT6L,TRAC,GZMB,SLC38A1,PTPRCAP,CD2,GZMA,TENT5C,PTPN22,RNF125,ETS1,PTPRC,FYN,LCK,CAMK4,RGCC,BCL11B,ZNF683,BTG1,PARP8,CEMIP2,PTGER4,PFKFB3,CD8B,CD6,CDC42SE2,CLEC2D,PIK3R1,NKG7,GNG2,ITGAL,CST7,ZAP70,EZR,PRKCH,RESF1,IL2RB,ARHGAP9,USP36,FOXO1,AKNA,IL32,CCR5,SYNE2,LEPROTL1,PREX1,GABARAPL1,PGGHG,FYB1,ARHGEF7,CARD11,EMB,ARL4C,RNF213,GLIPR1,TOB1,ABLIM1,GSPT1,ARAP2,NIBAN1,JMY,PRF1,STK10,CYFIP2,PARD6G,DUSP2,GPRIN3,LDLRAD4,IER5L,RCAN3,PPP2R5C,FNBP1,PLEKHA2,LBH,WIPF1,TBC1D10C,SARAF,MSL2,DDX24,APOL6,ZDBF2,ATP2B4,PIK3IP1,ODC1,STAT4,ATP1B3,RUNX3,CD5,CBLB,HECA,SUN2,KLF12,TSC22D3,CCND2,RBM38,MBNL1,METRNL,JAK1,GZMM,EVL,RAB27A,SYTL3,NAA50,IRF4,ARHGEF1,SRSF2,PRKCQ,MAPRE2,MPZL3,PITPNC1,SMCHD1,STK17A,ATF7IP,ACAP1,ARHGAP45,HIVEP2,CYTIP,HECTD1,CALM1,NFATC2,HLA-B,TC2N,ADGRE5,CREM,PDE7A,RBL2,DOCK10,CYTH1,EML4,CCDC88C,RORA,TENT4B,SEPTIN1,TNFRSF1B,SERPINB9,RASGRP1,NSMCE3,OXNAD1,HLA-C,CD247,PHF12,TUBA4A,GLS,HLA-F,WNK1,TTC39C,LNPEP,CDKN1B,PDE4A,PIP4K2A,CLEC2B,SIK3,SEL1L3,CITED2,MGAT4A,SH2D2A,KCNAB2,CEBPZ,ISG20,SEPTIN9,CORO1A,EVI2A,PDE3B,UTRN,MCM6,SMARCA5,ARHGEF3,IL2RG,UBC,HCG18,PPP1CB,SNRK,PABPC1,P2RY10,APBB1IP,NEU1,CCSER2,CD99,CDK17,SLC16A1,SATB1,MLLT6
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_Mast cells_PMID_38871184,Eosinophil,CPA3,TPSAB1,GATA2,CTSG,CLU,TPSD1,KIT,SLC18A2,VWA5A,PTGS2,HDC,ACSL4,AKAP12,HPGD,IL1RL1,MS4A2,DUSP6,NSMCE1,SIGLEC6,GLUL,CSF1,HPGDS,GCSAML,ITGA2B,SLC22A17,AHR,PTGS1,MAOB,ARHGEF6,ABCC4,LEO1,SLC45A3,PTPRB,NFKBIZ,TUBA1A,BTK,ALOX5,ATP6V0A2,GALNT6,CTTNBP2,CD69,GALC,MAPK6,ELL2,BACE2,BMP2K,VIM,VEGFA,B4GALT5,RRAD,LMNA,CAPG,HSP90B1,KRT1,TNFRSF9,C1ORF186,CD22,DLC1,NTRK1,ALDH1A1,CD84,RGS1,MITF,CSF2RB,DUSP10,GRAP2,SCN7A,PBX1,PAG1,RAPGEF2,TIMP1,ADAM12,PALLD,FOSB,LIF,CLNK,NR4A1,HSPA5,CD63,NCOA4,MAST4,ARG2,PHLDA1,TESPA1,CDK15,TENT5A,LAX1,MLPH,ZC3H12A,EPAS1,CPM,SPECC1,TSC22D1,SIGLEC8,SEPTIN2,SWAP70,RAB27B,RGS13,PLPP1,PLAT,TAL1,CALB2,P2RX1,FER,RGS2,BHLHE40,FCER1G,LAPTM4A,UNC5B,CLCN3,CD44,SLC4A2,SLC24A3,SLC44A1,CREB3L2,FERMT2,RBBP8,CD82,PPM1H,RGS16,SLC26A2,SDCBP,CD38,PMEPA1,XBP1,CPEB4,CTSD,TNS1,HSD17B12,CAVIN2,LAT2,RAC2,ADGRE2,ITGAE,TANC1,HIPK2,ZEB2,MT2A,FADS2,IL4R,LPCAT2,ENPP3,OSBPL8,JUN,AFF2,DUSP14,CTNNBL1,KCNH2,FCER1A,ALS2,COL18A1,TNIK,FOXP1,CD83,MAP3K8,CCDC71L,PPP1R15A,KDM6B,STAP1,TRIO,CNRIP1,ST8SIA6,PROS1,SEMA7A,GNS,SMYD3,MAPK1,THBS1,PDIA3,NBAS,FADS1,AGAP1,RASSF2,PLIN2,TMEM273,STXBP5,CANX,GNPTAB,TIMP3,ZNF48,EMILIN2,EGR3,PSAP,KLF6,ATP2A2,NEDD9,RNF144A,DNAJB9,NR4A2,VAT1,CD276,TNFAIP8,HMGCS1,HYOU1,ITGAV,AGAP3,ARHGAP18,GM2A,LMO4,MYADM
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_Epithelium_PMID_38871184,Eosinophil,KRT13,KRT5,KRT4,KRT15,DSP,KRT6A,TACSTD2,SFN,KRT19,S100A14,S100A9,HSPB1,CSTA,CSTB,CLDN4,S100A2,AQP3,RHCG,LY6D,PITX1,S100A8,S100A16,CRABP2,DSG3,GSTP1,TRIM29,PERP,DSC3,SERPINB2,GBP6,SERPINB3,CAPN14,PKP1,CALML3,ALDH3A1,EMP1,H19,PPL,JUP,PTPRF,KLF5,RND3,EHF,TXN,SCIN,LAD1,FXYD3,SPINK5,SERPINB4,S100A11,ELF3,IRF6,ALDH3A2,NCOA7,IFI27,LYPD3,SERPINB5,SCEL,MAL2,EMP2,SDC1,RHOV,CCND1,ALOX15,ZNF750,ANXA2,ITPKC,DST,ADH7,IL1RN,TM4SF1,OVOL1,DSC2,PKP3,TP63,TMPRSS4,DHCR24,SERPINB13,TSPO,NTRK2,LAMB3,RAB25,GABRP,SH3RF2,MPZL2,CLCA2,NIBAN2,CLDN7,VSNL1,CTNND1,S100A10,CLTB,CDH1,DUOXA1,TKT,CTTN,DUOX1,LTA4H,TRNP1,CAPN1,DDR1,EVPL,EGFR,JAG1,MYOF,IMPA2,NFIX,YBX3,HBEGF,GIPC1,PTPN13,ANO1,CD9,FGFR3,PLK2,ZNF185,MAOA,SOX2,NECTIN1,FAT2,IGFBP2,GNG12,RAPGEFL1,COX5B,HES2,C6ORF132,ATP5MC3,PGD,SLC7A1,IER3,CYC1,MPP7,CBR1,PRDX5,GLTP,NCKAP1,YAP1,CDCP1,PRDX1,TJP1,H1-0,AMOTL1,EPS8L2,PHLDA3,ERBB2,BARX2,ARHGAP23,RAC1,TTLL12,ALDH9A1,ATP8B1,ESRP1,PARD3,CES2,RARG,ATP5F1B,ATP5F1A,CTNNA1,MIR205HG,LGALSL,GPC1,STAP2,PAX9,MTUS1,KIF1C,ANXA1,PDLIM1,UQCRC1,DSTN,AOPEP,HLF,BLVRB,RAB10,LGALS3BP,ALDOA,PLS3,TPD52L1,COX4I1,HEBP2,SPINT2,CAPNS1,FRMD6,ASPH,KIAA1217,COX8A,SDC4,PRRG4,SULF2,RAB11A,HDGF,SPINT1,ATF3,PLXNB2,TRIP6,CPNE3,PLXNB1,UQCRQ,HSBP1,ENO1,SYPL1
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_Myeloid_PMID_38871184,Eosinophil,HLA-DRA,HLA-DRB1,HLA-DPA1,HLA-DPB1,CD74,HLA-DQA1,LYZ,HLA-DRB5,IL1B,C1QB,C1QA,HLA-DQB1,C1QC,CSF1R,CTSZ,IFI30,CXCL8,TGFBI,EREG,CST3,FGL2,GPR183,HLA-DMB,HLA-DMA,F13A1,RNASE1,CD86,CXCL3,CPVL,MPEG1,MS4A6A,CXCL2,CTSB,STAB1,INSIG1,CD14,HLA-DOA,CTSH,AXL,CLEC10A,CTSL,HLA-DQB2,G0S2,AIF1,MAFB,CTSS,FCGRT,PLAUR,GRN,PLEK,CD83,DNASE1L3,THBD,LGMN,SOD2,MMP9,SEMA6B,C5AR1,CYBB,PSAP,SLAMF7,PPIF,SLCO2B1,CD1E,A2M,IRF8,HLA-DQA2,ICAM1,CIITA,FTL,NPC2,RAB31,KCTD12,CXCL16,OTUD1,ATF3,ADA2,CD68,OGFRL1,SLC8A1,CD163,FCER1A,YWHAH,PXDC1,SGK1,PEA15,MS4A7,SLC40A1,SERPINB9,MGAT1,VSIG4,PLXDC2,CD4,SAMHD1,HMOX1,PTPRE,FCGR2B,CEBPD,SAT1,FCGR3A,FPR3,ANXA5,EPB41L3,EMILIN2,TAMALIN,FNIP2,ABL2,CSF2RA,CFLAR,FCGR2A,CLEC7A,RASSF4,CD93,RNASE6,ACP5,SERPINF1,RAB20,TBC1D9,MAFF,SH2B3,PPT1,CHMP1B,ITGB2,MMP14,KLF4,WDFY4,DOCK4,VASH1,LITAF,ARL4C,ENG,GNA13,HSPA1A,PALD1,CD209,ATP2B1,LST1,THEMIS2,CDKN1A,OLR1,ALDH2,ETV3,PIK3R5,TMEM176B,DAB2,JAML,AP1B1,NRP1,GPX1,IER3,TYMP,ABCA1,LIPA,TYROBP,MXD1,TNFAIP2,GPAT3,SULF2,ADAP2,SNX8,PLD4,MARCKS,SLC15A3,NLRP3,RASGEF1B,ZFYVE16,ADAM28,PLD3,SLC43A2,MFSD1,NAMPT,IGSF6,IL1R1,RNF130,PELI1,MAN2B1,CTSC,IL13RA1,PDE4B,GLA,PLSCR1,SPI1,DUSP2,DAPK1,ENPP2,SGPL1,CREG1,BID,RBM47,PLBD1,PLEKHO1,RNASET2,HBEGF,SOCS3,ALCAM,PHACTR1,IL18BP,HEXA,TSPAN33,KIF1B
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_NK cells_PMID_38871184,Eosinophil,GNLY,CD7,CD247,IL2RB,KRT86,PRF1,GZMA,TNFRSF18,B3GNT7,PIK3R1,NKG7,SLA2,TRDC,TMIGD2,DLL1,GZMB,SH2D1B,CD96,CEMIP2,CCL5,AKAP5,IRF4,ETS1,MATK,CTSW,KLRB1,TCF7,CD160,CST7,KRT81,LDLRAD4,PPP1R16B,RNF125,XCL2,SSH1,ARHGAP9,CNOT6L,PLEKHA2,AUTS2,CCND2,HOPX,FYN,CCDC69,FURIN,METRNL,RAB8B,JAK1,ABCB1,PARP8,SPN,AKNA,ZBTB16,SEC14L1,SLC38A1,ZCCHC2,SEPTIN6,PHYKPL,SLFN13,PIK3AP1,PDE4D,IL32,PTPN22,FAM177A1,SLA,FKBP5,AOAH,TENT4B,PTPRCAP,PIK3IP1,ITGB7,PREX1,RBM38,GNG2,APMAP,PRKCH,RANBP2,ZAP70,PRKX,LPIN1,TGFB1,PIP4K2A,SYTL3,STAT4,SKI,EVL,ARHGEF7,CYFIP2,TNFRSF1B,ITGA1,STAM,UBE2M,LCK,PTP4A1,ZDBF2,MACF1,NAP1L4,GATA3,ST3GAL1,PLEKHO1,CXCR4,SUN2,CTDP1,SH2D2A,CRYBG1,WIPF1,FOSL2,ATM,FNBP1,ATP1B3,HNRNPUL1,ABL1,SPRY1,PDE4A,MSN,PLCG2,ARF6,PABPC1,ADGRE5,ZBTB1,CD3E,CDC42SE2,ABLIM1,CORO1A,CARD11,JMY,EMB,APOBEC3G,BCL2L11,TCIRG1,MGAT5,PGK1,G3BP2,SATB1,PITPNC1,FOXO1,PRPF6,TTN,VPS37B,INPP4A,H1-4,SIK3,MSL2,SLC16A3,GLIPR2,CNOT2,PFKFB3,GPRIN3,TMSB4X,LCP1,PSD4,ITM2C,IL2RG,RIN3,ZFP36L2,HELZ,NR3C1,PDE3B,GLIPR1,PTPRC,HIVEP2,PGGHG,CCSER2,CSNK1D,GYPC,PLCL2,SEPTIN1,CTNNB1,ACAP1,SIPA1,APOL6,UTRN,RHOC,OXNAD1,FAM102B,RAB11FIP1,MBNL1,SLC1A4,IFITM2,IFNGR1,ZNF609,SPOCK2,PRKAR2A,RBL2,ZNF331,PLAAT4,SACM1L,APOBR,STK10,TRIM28,ITGB1,ATP8A1,IRS2,ATXN7L3B,RASA2,RAB27A,KLF13,ESYT2,IRAG2,RNF168,PRDM2
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_Eosinophils_PMID_38871184,Eosinophil,CLC,GAPT,CYBB,NCF2,BASP1,OLR1,ADGRG3,FFAR2,FPR1,SYNE1,SORL1,SERPINA1,BCL2A1,SIGLEC10,LRG1,CD101,ALOX5AP,MXD1,ADAM8,MARCKSL1,PTAFR,SEMA6B,ADGRE1,PADI2,SIRPA,DENND5A,NCF1,VASP,NBN,THBS1,PLAUR,SLC29A1,NINJ1,FGD4,PLEK,GNA15,SOD2,CAT,COTL1,SRGN,C3AR1,FNDC3B,IFNGR1,ANPEP,JAML,PTPRE,RILPL2,IL1A,FRY,RNF144B,DENND3,GPR160,CCL4,CD300LB,PRR5L,FRMD4B,ITGB2,PDE4B,TYROBP,RNF19B,PRSS33,HIF1A,ITGAM,LPCAT1,EHD1,VSTM1,CAMK1D,ANP32A,CCR3,SLC16A3,FTH1,RFLNB,PNRC1,PLXNC1,ITPRIP,ATP2A3,ZDHHC18,HCK,SAMSN1,PRDM1,IL13RA1,IL16,MBOAT7,BID,G0S2,LST1,GPI,APLP2,N4BP1,TXNIP,ADGRE3,LIMS1,C15ORF39,SKIL,LCP2,MFSD12,NFKB2,GPR65,NAMPT,SLC43A2,TRIB1,LIMK2,TNIP1,VSIR,CNR2,HCLS1,ABHD2,ACTN1,PYGL,RNASET2,MANBA,ICAM3,IFNGR2,NFKB1,LAPTM5,ICAM1,PPCDC,PIK3CB,CXCL16,THEMIS2,CFD,ANKRD13A,MALAT1,AMPD2,DACH1,PGK1,IL3RA,BIRC3,CORO1A,ASB2,LPCAT2,TMIGD3,RASSF2,VDR,PTGER2,SSH2,PTPN12,SPI1,CMTM6,IL1RAP,TLR4,LGALS12,P2RY8,HIP1,ALOX15,CD300LF,NCF4,C5AR1,PNPLA6,CDC42SE1,FMNL1,CHD7,TES,MYO1F,PHF20L1,PSEN1,MMP25,CYRIB,TIMP2,RALB,P4HA1,MYH9,SLFN13,GPCPD1,ABCA1,ARL4C,TNFAIP2,CASS4,CAMK1,ARRB2,AMPD3,EFHD2,PLIN2,PPP1R3B,RASSF5,GALNT1,IVNS1ABP,ORAI2,MARCHF3,RIN3,LFNG,BCL3,APOBR,DSE,PSTPIP2,TMEM123,KLHL6,STK40,SERP1,LIMD2,FHL3,BOD1L1,ENO1,NIN,IRF2BP2,FGR,SRRM2,PGD,PLCB2,ATP2B1
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_Th17 cells_PMID_38871184,Eosinophil,IL7R,SPOCK2,CD6,TRBC2,RORA,TRAT1,ETS1,CD5,ICOS,MAF,CD28,KLRB1,CD2,CNOT6L,TRAC,INPP4B,TCF7,BCL11B,LTB,CD3D,SESN3,PBXIP1,IL32,CAMK4,GPRIN3,USP36,BCL2L11,CD3G,CLEC2D,CD3E,MGAT4A,ARID5B,GIMAP7,GATA3,PDE4D,PIK3IP1,CD96,CYTH1,FOXO1,TNFRSF25,SLFN5,SLC38A1,DUSP16,BCL2,CD4,SARAF,SEPTIN9,LDHB,PTPRCAP,ARL4C,FURIN,MFHAS1,SEPTIN6,FYN,PPP1R16B,LCK,EVL,CXCR4,EML4,JMY,RCAN3,CD247,LEPROTL1,IKZF3,ATP2B4,FNBP1,FKBP5,ITM2A,ITGA4,CEMIP2,NR1D2,MGAT5,FCMR,CD48,ITPKB,TENT5C,RASGRP1,NR3C1,MACF1,GSPT1,RNF19A,P2RY8,SLC1A4,ITK,PRKCH,CDC42SE2,CRYBG1,CREM,ERN1,HNRNPUL1,ABLIM1,PHACTR2,TPT1,ARAP2,ANXA6,HECTD1,KLF12,DDX24,TLE5,HIVEP2,SATB1,TMC8,TMEM123,FOXP1,DUSP4,CERK,BDP1,STAT4,CD52,G3BP2,ITGAL,SEPTIN1,CDV3,RNF125,NOP53,ATM,CCND2,ZAP70,OXNAD1,TRAF3IP3,FAM107B,TLK1,DGKA,EMB,OPTN,STK24,IL2RG,PSIP1,CCDC88C,JAK3,MBNL1,CORO1A,PPP1CB,CCSER2,NDFIP1,LBH,TOMM7,WNK1,CDKN1B,FXYD5,CYLD,SPATA13,TTC3,EIF3E,HECA,ARHGEF7,GSTK1,ISCU,GPR183,IKZF1,DIAPH1,NFATC2,IL6ST,ANP32B,ELK4,RBL2,MYCBP2,MLLT6,RACK1,NCL,GNG2,GLG1,PPP2R5C,RSL1D1,CAPN2,NOP58,SNX9,BTG1,TRPM7,SUN2,ZC3HAV1,UCP2,STAT5A,PGGHG,P2RY10,PLAAT4,MSL2,ADD3,PDCD4,UBA52,TRAF3,GCC2,UBTF,CMPK1,PABPC1,REST,RABGAP1L,LNPEP,CYFIP2,CD99,MPRIP,G3BP1,IL10RA,RHOH,IRF2BP2,PITPNC1,HINT1,UHMK1,STK17A,ACAP1
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_T reg_PMID_38871184,Eosinophil,FOXP3,IL1R1,BATF,TIGIT,ICOS,MAF,TBC1D4,CTLA4,CCR4,CD28,PBXIP1,GBP5,ZC3H12D,IL32,TNFRSF1B,TRBC2,CXCR6,IL2RA,LTB,IKZF3,TNFRSF4,SPOCK2,TNFRSF18,RASGRP1,ARID5B,IKZF2,DUSP16,CD4,TRAC,FAM53B,GPR15,TENT5C,IL2RB,RNF213,CCR8,ETS1,CD5,TTN,BCL2,CD27,PHACTR2,GBP2,FLVCR2,CD247,CD2,PTPRJ,MICAL2,PHTF2,FOXO1,CD3D,MYO5A,CD3E,IL7R,IL6ST,KAT2B,FAS,FCMR,PIK3IP1,PELI1,UGP2,NAB1,GATA3,GCNT1,PTPRCAP,UCP2,CD6,SETD1B,PRDM1,HNRNPLL,LCK,CYTIP,SESN3,CCND2,MLLT6,FYB1,CTSC,IPCEF1,PRDM2,RORA,CEP120,TRAF3,SAMHD1,IL1R2,BCL11B,SIRPG,TLK1,VPS13C,CDKN1B,CCNG2,LBH,TAB2,ITGAL,HS3ST3B1,CCDC88C,SH2D1A,RBM38,JAK1,VAV3,IL10RA,ORMDL3,GALNT10,CARD16,WNK1,TFRC,FYCO1,ZDBF2,IRS2,RAB11FIP1,GLRX,ZBTB38,STAM,CCR5,HIVEP1,GLCCI1,PAIP2,SNX9,GPRIN3,DUSP4,RAP1A,BCL2L11,G3BP2,ATP2B4,CYFIP2,DNPH1,STK10,PRKCH,ZNF831,ENTPD1,PPM1G,FURIN,CD3G,SLC16A1,TOR1AIP2,PIM2,SH3KBP1,LRRC8C,MTMR6,RBPJ,ANKRD12,PTPRC,TRIB2,TBC1D10C,OPTN,ICAM3,LIMA1,CEMIP2,CACYBP,GALM,ASB2,CYTH1,NOP58,TNFRSF25,ISG20,SLFN5,MIB1,APBB1IP,BIRC3,GPR68,JMY,SEPTIN1,IL6R,TMC8,FYN,ASXL1,TANK,EML4,MEF2D,TULP4,ZAP70,MAP4K1,SLAMF1,GADD45A,MSL2,CREBRF,TRAF3IP3,NLRP1,IL2RG,SSH1,GLS,HLA-A,RABGAP1L,SOD1,MFHAS1,DDX24,STK17B,JAK3,PAK2,CDV3,SPTAN1,YPEL2,CLEC2D,STARD7,ATP13A3,NCK2,SLA,NCOA3,SGMS1,HIVEP2,CNOT6L,ACAP1
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_Th2_PMID_38871184,Eosinophil,IL17RB,GATA3,TCN1,MAF,ICOS,TNFRSF11A,TIGIT,CHDH,ITGAL,INPP4B,GPR15,IL13,ENTPD1,IL5,UCP2,KLRB1,IL2RA,SESN3,SOS1,TGFBR3,CCNG2,IL32,ITM2A,ZNF282,CD4,DUSP4,CD5,PLIN2,RBPJ,RORA,PMCH,SLAMF1,PLCL2,ZC2HC1A,THADA,CD6,SLC1A4,UQCRC2,CD3D,APP,NR3C1,YPEL2,BATF,FURIN,ADAM19,TAB3,B3GALT2,MFHAS1,DZIP3,FFAR3,PGM2L1,DUSP16,PHTF2,CXCR6,PDLIM5,ITGA4,ADGRG1,CD3G,IKZF3,CLEC2D,ASXL2,RASGRP1,TTN,FAM102B,SPOCK2,ANKRD12,CD109,CD3E,TRBC2,CD28,CTLA4,LRRC8C,MBNL1,BCL2,G3BP2,BLM,PCNX1,PRDM1,STING1,PELI1,SH2D1A,PBXIP1,RNF213,NOSIP,MAN1C1,TRAF3IP3,PHLDA1,EML4,CD247,DGKE,ZBTB24,PLAAT3,CYTH1,LAG3,ST6GAL1,AFAP1,BCL2L11,PPP1R16B,ORMDL3,ARID5B,SLFN5,TRAC,CLDND1,IL2RG,LIMA1,PXDC1,FAM53B,TOR1AIP2,IL26,EVL,CREM,PKIA,NMRK1,PPARG,ITPKB,SIRPG,CEP350,LGALS8,FAS,KIF3A,RABGAP1L,PTPRCAP,SSH1,DOCK8,RUNX2,STK17B,IL10RA,TOX,RHBDD2,ASF1A,RNF19A,PXK,HLF,KLHL6,ERI1,CCND2,ZMYM2,GPRIN3,CDYL2,SLC27A2,ALOX5AP,ERN1,OGDH,ITK,FNBP1,ASB2,ETS1,MAST4,BIRC3,ARAP2,NAB1,ITGB7,SLC38A1,MACF1,PDCD1,CD2,NIBAN1,CARD16,ANTXR2,FBXL17,LCK,NFATC3,EPSTI1,NDFIP2,SLA,RAB11FIP1,CAB39,TMEM273,SMAP2,PIM2,CERS6,TBC1D4,ATP10D,ATP2B4,IFNAR2,TNFRSF18,CDV3,KAT2B,TULP4,GLO1,TNFRSF4,NAP1L4,TNFRSF25,NCOA3,CDK6,PARK7,NEDD8,SLC16A1,GMFG,KDM1A,ARL4C,AMD1,NF2,PTPRJ,CD96,CHD3,TOR1AIP1,APBB1IP,RFTN1,RCAN3
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_B cells_PMID_38871184,Eosinophil,IGHA1,JCHAIN,IGLC2,IGKC,IGHG1,CD79A,MS4A1,MZB1,BANK1,CD19,HERPUD1,MEF2C,CD74,PAX5,DERL3,CD79B,SSR4,HLA-DQB1,FCRL5,RALGPS2,UBE2J1,SLAMF7,HLA-DRA,ISG20,IRF8,HLA-DRB1,HLA-DQA1,POU2AF1,SEL1L3,CTSH,TXNDC11,HLA-DOA,HLA-DPB1,CRELD2,NCOA3,HVCN1,TPD52,LTB,RAB30,TNFRSF13B,LY9,HLA-DPA1,CYTIP,PTPRCAP,PRDM1,PLCG2,LYN,ORAI2,POU2F2,TENT5C,PLPP5,HLA-DMB,PIK3AP1,GGA2,EDEM1,METTL7A,CLN6,SYNGR2,FCHSD2,ADAM19,SESN3,BCL2L11,HLA-DMA,CCDC50,MARCKS,ISCU,TCF3,CORO1A,CYBA,CCDC88C,SP140,CD27,GNG7,PDIA6,EZR,STRBP,RUBCN,PDE4B,PARP1,ST6GAL1,DGKD,SH3BP5,ICOSLG,THEMIS2,SYK,GRK6,ERP29,CYBB,CDV3,PPM1K,SMARCB1,SERP1,FAM107B,CTSZ,EEF2,HLA-DRB5,CTSS,BASP1,SLC38A1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_Endothelium_PMID_38871184,Eosinophil,SPARCL1,PLVAP,A2M,IGFBP7,SPARC,IGFBP4,VWF,COL15A1,CD93,FLT1,COL4A2,ACKR1,PODXL,SOCS3,COL4A1,CD34,LIFR,KDR,HSPG2,ENG,TM4SF1,SPTBN1,ITGA6,TNFRSF10D,PCDH17,GNG11,APLNR,MRTFB,APP,RAMP3,JAM2,NRP1,TIMP3,THBD,ADGRL4,NES,CLDN5,IFI27,SLC9A3R2,RND1,NPDC1,CFH,SLC25A25,APOLD1,ADGRF5,EMCN,RCAN1,SLCO2A1,CLEC14A,CCN2,CRIP2,CAVIN1,EMP1,CYYR1,TCF4,TGFBR2,TSC22D1,CDH5,ADAMTS1,ICAM1,VWA1,PKP4,FGD5,LAMB2,HEG1,LEPR,ID1,GSN,PTPRG,ETS2,ITIH5,LAMC1,ESAM,EGFL7,BCAM,LAMB1,PRSS23,KCTD12,GJA1,SHANK3,CALCRL,INSR,NFIB,IFITM3,TJP1,ERG,CNN3,CAV1,ADCY4,PALMD,EPS8,TEK,SERPINH1,CSGALNACT1,MATN2,PLXND1,RAPGEF3,FSTL1,TXNIP,RAI14,ECSCR,ACVRL1,RAMP2,SYNPO,PDLIM1,KLF2,BMPR2,MCF2L,KANK3,ITGA5,ABCB1,WWTR1,MEF2C,UACA,MCTP1,OLFML2A,ELK3,PTPRM,DIPK2B,NUAK1,FZD4,TIE1,SHROOM4,MYO5C,IL33,MGP,ADAM15,FAT4,GIMAP8,ARHGAP29,ARHGEF15,ID3,SELP,C1QTNF5,RAPGEF4,FAM13C,PXDN,C1ORF115,SHE,TM4SF18,TSHZ2,MMRN2,PTPRB,DOCK4,NDST1,ADGRL2,GIMAP6,DOCK9,ARHGAP31,LIMS2,NOTCH4,TSPAN7,EPHB4,CFI,LDB2,PRCP,LAMA5,ROBO4,NECTIN2,PREX2,LMO2,ARAP3,NNMT,SOX18,KLF9,SMAD1,SPNS2,TMTC1,MCAM,AFDN,TCIM,GASK1B,NOSTRIN,GRB10,NEAT1,CD320,ITGB4,CDC42BPB,PDE2A,TIMP2,PPFIBP1,GIMAP4,HDAC7,RDX,PLCB1,RBFOX2,DPYSL3,TNS2,MET,IL6ST,BAG3,JCAD,SASH1,AOC3,RALGAPA2,PTPN14,SNTB2,HTRA1,TRIB1,MTUS1
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_Fibroblasts_PMID_38871184,Eosinophil,COL3A1,COL6A2,COL1A2,DCN,COL6A1,COL6A3,RGS5,COL1A1,COL6A5,SPARC,C1S,FBLN1,A2M,SPARCL1,PTGDS,FN1,MFAP4,LUM,IGFBP4,COL5A1,SFRP2,C3,C7,C1R,MMP2,COL5A2,ADAMTS1,COL14A1,ADH1B,CCDC80,APCDD1,LAMA4,RARRES2,CCN1,TIMP2,MXRA5,COL12A1,CALD1,SERPING1,PDGFRA,IGFBP7,FBN1,APOD,PDGFRB,MGP,ADGRA2,CFH,CRISPLD2,ABCA8,LTBP4,SERPINF1,FSTL1,LRP1,LAMB2,BGN,TIMP3,PLXDC1,LAMC1,LAMB1,LTBP2,TNXB,MYL9,LAMA2,NR2F2,DPT,THY1,TCF4,COL15A1,CTSK,SEMA5A,LHFPL6,PCOLCE,CPE,MYLK,ANTXR1,AEBP1,GFRA1,FMOD,TNC,C11ORF96,CAVIN1,IGFBP5,ABI3BP,CCN2,NBL1,SPON1,PLPP3,COL4A2,KANK2,VCAN,KCTD12,MRC2,APP,FGFR1,COL18A1,GREM2,ITIH5,VSTM4,SOCS3,PDE5A,SPTBN1,NID1,THBS2,SH3D19,PAM,CDH11,PCDH18,ITGA8,RASD1,SERPINH1,CXCL12,MAP1B,DST,ISLR,CEBPD,SYNPO2,ADGRL2,MXRA8,CYBRD1,MOXD1,MMP14,BMP4,CLDN11,PODN,EDIL3,SOD3,NR2F1,TPM2,ASPN,EMILIN1,CDH6,DKK3,DDR2,EGR1,TAGLN,FAM162B,ADAM33,ACTA2,KLF9,KIRREL1,MATN2,EPHA3,SELENOP,PHLDB1,TSPAN11,RNF150,LSAMP,NFATC4,F2R,MFGE8,NTM,CYGB,NEURL1B,TBX2,CXCL14,ABCA6,PARVA,PRRX1,PRSS12,FILIP1L,PEAK1,CNN3,ADIRF,GPNMB,HSPG2,PLPP1,RBFOX2,HSPA1A,IRAG1,PLEKHA5,GUCY1A1,IFITM3,GAS6,TGM2,CCL2,LTBP1,GSN,EFEMP2,EDNRA,ANK2,TJP1,EPS8,FAT4,WNT5A,COL5A3,NNMT,ZCCHC24,KITLG,TWIST1,NFIB,TFPI,GPX3,EHD2,COL4A1,ALCAM,ADM,TNFRSF21,HSPA1B,OSR2,COL8A1
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_Esophageal-specific eosinophils_PMID_38871184,Eosinophil,CCL4,NFKB1,NCOA4,GNA15,CXCL8,MARCKSL1,CD83,OLR1,SLC7A5,TXNIP,RGS1,AZIN1,RASSF5,ZC3H12A,CDKN1A,TGM2,LAPTM5,HSP90AB1,PRDM1,TPI1,TNFAIP3,TIPARP,THBS1,SKI,PKM,NINJ1,ELL2,JOSD1,CD81,ARL4C,HSPH1,ALOX5AP,EHD1,PGK1,TNIP1,ICAM1,NFKBIZ,FTH1,B4GALT5,NFKBIA,CXCL16,TRIB1,ITPRIP,SEMA6B,PDE4A,UBB,PPP1R15A,CSRNP1,CTSD,PDE4B,ENO1,RNF144B,MFSD12,RNF19B,NCF1,SQSTM1,REL,CD44,LRG1,RANBP2,PHLDA1,KLF10,APLP2,IL1RL1,SMAD7,ACP5,IRF2BP2,NR4A3,SOD2,N4BP1,CREM,BCL3,RUNX3,B3GNT5,DSE,HSPA1A,PRR5L,IL1B,GALC,CD300LB,BCL2A1,ALDOA,SKIL,GPI,SLC16A3,ADGRG3,AK2,IL13RA1,B4GALT1,SAMSN1,IL10RA,DENND5A,SERP1,METRNL,MAP2K3,HMGA1,LDHA,DEGS1,CHMP4B,HLA-B,LPCAT1,HSP90AA1,SRGN,CYBB,TAMALIN,LIMS1,HSPD1,KDM6B,HLA-DRA,IFNGR1,FPR1,RELB,NFKBIE,CD101,RILPL2,BASP1,IFNGR2,PDCD4,HLA-A,GPR160,MAP3K8,ATP2B1,PPP1R15B,SIRPA,BIRC3,TNFRSF1B,CD69,VEGFA,BTG2,P2RY8,STIP1,CPD,TLE3,DDIT4,P4HA1,VDR,PTGER2,TP53INP2,HSPE1,MAPKAPK2,FOSL2,GABARAPL1,FOSB,NFKB2,ASB2,ZNFX1,TMBIM6,EGR3,GPR35,ZDHHC18,GLUL,HMG20B,ERO1A,R3HDM4,DNM2,GPR65,BCL9L,PLIN2,C3AR1,PDXK,HSPA8,DOT1L,IRF2BPL,RAPGEF1,SUSD1,EFNB2,ATP2A3,PLEK,FURIN,QSOX1,NBN,IL1A,CHSY1,CD82,NUP98,NAPA,KCNH2,FRMD4B,TOR1AIP1,RAB5A,ZNF331,CLCN3,SEMA7A,STK40,HLA-C,ECE1,IL1RAP,PSEN1,PNRC1,CANX,BHLHE40,BIRC2,TFDP1,LPXN,SIN3A,JMJD6,ARRDC2,SERPINA1,LIMK2,CD74
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_peripheral blood eosinophils_PMID_38871184,Eosinophil,MNDA,S100A8,FYB1,SELL,SYNE2,LYZ,CCPG1,ITGA4,MALAT1,SP110,RIPOR2,RGS18,PNISR,CD302,SRSF11,S100A9,TPR,PPP1R12A,BPTF,CELF2,CAT,CLC,NEAT1,LRRFIP1,TMEM154,USP15,NIN,RGS2,SYNE1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell RNA-sequencing of human eosinophils in allergic inflammation in the esophagus,38871184,Human_Eosinophil_CD4 T cells_PMID_38871184,Eosinophil,IL7R,SPOCK2,RORA,CD6,CCR4,LTB,CD5,TRBC2,TRAT1,CD28,ETS1,CD3D,KLRB1,MAF,TRAC,CNOT6L,CD2,PBXIP1,BCL11B,ICOS,USP36,PIK3IP1,LEPROTL1,GPRIN3,CXCR4,TCF7,MGAT4A,RNF19A,P2RY8,CD3E,ERN1,PTPRCAP,FNBP1,NR1D2,FOXO1,RESF1,TNFRSF25,CD4,IL32,CERK,ZAP70,GNG2,PDE4D,LCK,CYTH1,EML4,MGAT5,INPP4B,CD3G,RABGAP1L,HIVEP2,CAMK4,ARAP2,FYB1,JMY,ATP2B4,SEPTIN9,FURIN,CD247,SLC38A1,EMB,SARAF,CD96,NR3C1,RCAN3,MACF1,BCL2,CDC42SE2,CXCR6,PPP1R16B,PTPRC,CEMIP2,ARID5B,SEPTIN6,ITGA4,EVL,ARHGDIB,MFHAS1,DIAPH1,FKBP5,CORO1A,IKZF1,HECA,WIPF1,PPP2R5C,ZC3H12D,TENT5C,GSPT1,SYNE2,NIBAN1,JAK3,ANKRD12,GLIPR1,FYN,JAK1,ARL4C,ADAM19,ATXN7,RNF213,YPEL5,PRKCH,DUSP16,HNRNPUL1,CCSER2,KLF12,STAT4,ANXA6,EPB41,TMEM123,MBNL1,ARHGEF1,PLAAT4,SEPTIN1,CLEC2D,FAM177A1,RNF125,CD48,ABLIM1,IL2RG,MLLT6,LPIN2,ARHGAP45,RASGRP1,BCL2L11,TTC39C,UTRN,CRYBG1,EVI2B,GYPC,PLCG1,ATF7IP,GALNT10,STAT5B,IKZF3,PREX1,ATM,SNRK,ACAP1,TSC22D3,ITK,PPP1CB,HECTD1,SEL1L3,ITM2A,OXNAD1,SUN2,RBL2,ITPKB,EVI2A,TLK1,CYFIP2,TMC8,PGGHG,ZDBF2,CDKN1B,CLEC2B,ATP2B1,TBC1D10C,GCC2,ITGAL,NFATC2,SMAP2,DDX24,TPT1,GLS,CREBRF,SF1,STK10,GLG1,KAT6A,NSMCE3,LNPEP,MBP,CREM,BTG1,SLFN5,ICAM3,SAMHD1,WNK1,MPRIP,ZFP36L2,PHF12,NAA50,CSNK1G3,TSPYL1,RASAL3,CCDC88C,ELK4,MAPRE2,TC2N,SPATA13,ARHGAP4,TNFRSF1B,NDFIP1,SMCHD1,ARHGEF7,APOL6,YWHAB,ATXN7L3B,PIP4K2A
Single cell RNA sequencing of human eosinophils from nasal polyps reveals eosinophil heterogeneity in chronic rhinosinusitis tissue,38797240,PB eosinophils_PMID_38797240,Eosinophil,CCL4,CCL4L2,IGKC,CST1,CLDN4,FOSB,PIM1,CCL3,XIST,OLR1,NR4A3,TNFAIP3,S100A10,NR4A1,TFF3,AHNAK,CD83,BHLHE40,MYADM,PLAUR,FCER1G,SERPINB3,TAGLN2,ANXA1,CCL3L1,CXCL16,SLC2A3,AC020916.1,IGHM,KLF2,ADGRE5,ARHGEF40,JUND,PDLIM1,BCL2A1,PPP1R15A,PTPN6,CCL23,CD69,SOCS3,CD52,KLF6,RAB11FIP1,ANXA2,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single cell RNA sequencing of human eosinophils from nasal polyps reveals eosinophil heterogeneity in chronic rhinosinusitis tissue,38797240,NP eosinophils_PMID_38797240,Eosinophil,BIRC3,TNFAIP3,CCL4,OLR1,CCL3,NR4A3,NFKBIA,PLAUR,EREG,PPP1R15A,CREM,NFKB2,CCL3L1,CD69,NFKB1,CD83,ICAM1,FOSB,NFKBID,NR4A1,AL021707.6,CCL4L2,NFKBIZ,G0S2,SLC2A6,SOD2,BCL2A1,INHBA,IL10RA,ATP2B1,NBN,PTGS2,SKIL,SLC7A5,CXCL8,GRASP,GNA15,SERPINB2,RANBP2,SAMSN1,AC020916.1,REL,PLEK,JOSD1,GK,KDM6B,CXCL16,THBS1,USP36,IL1B,TMEM88,CST1,PDE4A,RNF19B,CDKN1A,CYB5D1,IL1A,HLA-DQB1,NAMPT,EGR3,SRGN,ELL2,AZIN1-AS1,JUND,HLA-DRA,TGM2,FRMD4B,CD55,GGT5,MAP1LC3A,MFSD12,LCP2,IER5,IL3RA,PDE4B,PIM3,FTH1,DENND5A,RHBDD2,LPXN,ZC3H12A,EIF1B,VEGFA,NR4A2,GALC,PHF20L1,ATP2B1-AS1,ZEB2,HMG20B,FCER1G,SYAP1,LPCAT1,TRIB1,RGS1,IVNS1ABP,THAP2,BASP1,AURKA,CHD1,PIM2,AZIN1,TP53INP2,NFKBIE,PRDM1,NINJ1,ABCF1,ALOX5AP,FOSL2,ACOT9,ITPRIP,SLC35A2,IER3,C3AR1,RNF144B,RBBP8,AC073335.2,SQSTM1,CD44,SELENOK,BCL3,SLC2A3,PFKFB3,IL2RG,KMT2E,TRGC2,XBP1,OXSR1,FFAR2,HLA-DRB1,HMGA1,IL1RL1,SLC16A3,JUN,CDC37,RELB,GPBP1,LIMS1,SERP1,HCST,PNRC1,ANXA1,RIPK2,TMEM176A,ZNF331,GK5,IRF2BP2,RILPL2,SDCBP,JMY,HSP90B1,GPR65,EMD,CSRNP1,GRINA,STARD4,ETF1,SOCS2,NDEL1,EHD1,OSM,TMEM176B,RIF1,RAB21,SLC16A14,DDX3X,TFDP1,SRSF3,CYCS,CLDN4,MAPK6,LMNB1,AREG,NFE2L2,TRGC1,FOS,MAFF,ZFP36,ATP1B3,DUSP2,EZR,DMXL2,DOT1L,B4GALT5,METRNL,CREG1,NFKBIB,DUSP6,NABP1,FPR1,FGD4,HSP90AB1,CCL23,LRG1,CYBB,POR,ZC3H13,TMEM54,TNFAIP6,DUSP16,NECAP1
Single-Cell Omics Analysis of Human Basophils Reveals Two Transcriptionally Distinct Populations,41498390,Human_Basophil_All_PMID_41498390,Basophil,ATP10D,GNAQ,AKAP12,IL3RA,CA8,SLC24A3,EPAS1,ATP8B4,TMEM164,PDLIM5,ENPP3,LINC02458,SAMSN1,CAMK1D,BCL2,MAPK14,TAFA2,PAG1,KLF5,HDC,MSI2,GAB1,GCSAML,DACH1,GAB2,NLK,CCR3,STXBP5,CRPPA,AC111000.4,YES1,CSF2RB,INPP5A,EXT1,RNF10,SYTL3,HIPK2,GPAT3,RAB8B,TBXAS1,PRKX,RAB31,FOXO3,BACE2,HSH2D,ABHD5,ABCC1,CELF2,FAM110A,AKAP13,AREG,BCAR3,JAK2,NFATC3,SYCP2L,ITGAX,MADD,CDK17,TLE4,PSME4,FRY,CDC42SE2,CHST11,CTNNBL1,GATA2,PLEKHA2,SEMA3C,USP48,MACF1,ITPR2,CD200R1,FANCC,SUSD1,GLUL,RAPGEF2,BIRC3,PAPSS1,MAML3,PRKCB,MAP3K8,SIPA1L1,CR1,OSBPL1A,PNPLA6,BORCS5,PPP1R16B,TRIO,STAM,RHOQ,SSBP2,GALC,STK17B,TMEM140,MYH9,GK5,TXNDC11,BTBD9,TBL1X,ANKRD28,NR4A3,CLK1,PPP1R12A,FBXW7,BABAM2,THSD7A,UGP2,BAZ2B,PHTF2,TPST2,ACSL4,LUZP1,MXD1,CHPT1,RUNX1,ST6GAL1,IRF1,ANTXR2,AL390957.1,GABPB1-AS1,TPST1,AC011476.3,RHOH,EPS15L1,PPARD,SPTBN1,TMEM131,MCTP2,SGPP1,EMILIN2,CYTIP,SLCO3A1,UHRF2,LAPTM4A,PICALM,MBOAT2,SRPK1,DENND1B,SLC7A11,RNF19B,TTC7B,FBXO11,PTGER3,GRB10,TNIK,DYRK1A,TRPM6,HERC1,DAPK2,SLMAP,MEX3C,STK4,KANSL3,RALGAPA2,FNDC3B,GIGYF2,ZFAND6,SEMA4D,NFIL3,FOXN2,PGD,EPS15,RNF103,SRGN,CHD7,LPCAT2,ATXN7,SORD,LINC01619,RAB1A,EEF2K,CSF1,ZBTB20,GNG2,MED13L,FCHSD2,SSH2,ADAM19,SLC7A5,TGFBR2,FTX,OSBPL8,HNRNPLL,TMCC3,ARL15,VPS37B,TP53INP1,HEATR5A,CCDC126,TMEM154,CCNG2,ARF4,CLINT1,ARID3B,ADARB1,TTLL7,ZC3HAV1,MAP3K5,MAP3K1,ANKRD44,EPSTI1
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_Macrophage_Group1_PMID_32398875,Macrophage,S100A12,S100A8,APOBEC3A,IL1RN,S100A9,CCL3L1,TNFSF10,CXCL11,CXCL10,FCN1,ISG20,CCL4L2,IDO1,ISG15,RSAD2,IFITM2,CCL4,IFIT2,DUSP6,NCF1,GBP1,WARS,IFIT3,NAMPT,VCAN,SERPINB9,CCL3,IFIT1,LILRA5,H3F3B,IFITM1,IFITM3,MX1,IRF7,ZFP36,SLC25A37,PLEK,GCH1,HPSE,SAT1,CCL8,HES4,MX2,MAFB,CCL2,DDX58,CCR1,HERC5,FFAR2,NFKBIA,DEFB1,ATF5,C15orf48,FPR1,GBP5,GBP4,IER2,CLU,CD300E,IL1R2,BCL2A1,FOS,TYMP,CALHM6,SELL,KLF6,RNF213,TAGAP,PTPRE,SGK1,SRGN,ANXA2R,SOCS1,VAMP5,CCRL2,SERPINB1,LCP2,LILRB2,CD69,MT2A,HIF1A,TIMP1,TNFSF13B,LMNB1,ACSL1,CCL7,CYP1B1,MXD1,LILRB1,EPSTI1,BAZ1A,SMCHD1,DUSP1,ELF1,JUNB,RIN2,NINJ1,CD48,TPM4,LYN,CORO1A,SLAMF7,CMPK2,FOSB,CKAP4,DDX60L,FGL2,ATF3,SOD2,CDKN1A,RNF19B,CEBPD,ANKRD22,SAMD9,TAP1,IFI16,SLC2A3,TLR2,XAF1,GK,FYB1,OAS3,IFIH1,CXCL8,FPR2,PSMB9,DYNLT1,IFI44L,KLF2,IFNGR2,OASL,SAMD9L,SAMSN1,OAS2,INSIG1,MARCKS,IFI35,CBWD2,B4GALT5,CD14,CD38,NT5C3A,CFLAR,HAVCR2,ACTG1,LILRB3,EGR2,TGFB1,GBP2,PLSCR1,TNFAIP6,CSF3R,SRGAP2,DEK,KLF4,IRF1,PIM1,MCL1,PHLDA2,CLEC4E,RGL1,TNFAIP3,BACH1,UBE2L6,IL4I1,AQP9,IFI44,STAT2,ATP2B1-AS1,ADGRE5,CSF2RB,SLC39A8,USP18,GIMAP4,FLOT1,SP110,OPTN,PIM3,TAOK1,SSB,PML,IER3,XRN1,SPHK1,CFP,SLC38A2,NEAT1,ZNFX1,STAT1,HIST2H2AA4,RNASE2,STX11,ARF6,SUB1,LAP3,NMI,FGR,PARP14,PPP1R15A,ZBP1
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_Macrophage_Group2_PMID_32398875,Macrophage,DNAJB1,HSPA1A,HSPA1B,CCL7,CCL2,HSPB1,HSPH1,CCL8,CXCL8,CCL3,TIMP1,SPP1,HSP90AA1,CCL4,FKBP4,MT2A,IER5,C15orf48,HSPD1,IER3,DEFB1,HSPE1,VAMP5,CTSL,IFITM1,IFITM3,ATP6V0C,CCL4L2,CXCL10,NINJ1,SOD2,CCL3L1,NFKBIA,TAOK1,EMP1,KLF6,JUN,PPP1R15A,BCL2A1,UBC,MARCKS,IFI30,IRF1,TYMP,CXCL2,IFI27,SGK1,ISG15,NME2,AC015912.3,UBE2L6,GNG5,SAT1,GADD45B,HSPA8,H3F3B,MAFB,FOS,CTSB,S100A10,MTRNR2L12,RNASE1,ANKRD22,DUSP1,HSP90AB1,CD163,CALHM6,CALM1,RSAD2,LAP3,LILRB4,PIM1,TAP1,GBP5,CD300E,FNIP2,CACYBP,ATP6V1G1,LYN,SQSTM1,MX1,TNFAIP3,STAT1,SLC39A8,HMGA1,JUNB,ELOC,TXN,IFI6,PSMB9,RGL1,IL4I1,ANPEP,PHLDA2,MMP19,TNFSF13B,DYNLT1,GBP1,PIM3,AQP9,SH3BGRL3,ISG20,APOBEC3A,OAS1,IFITM2,MGAT1,RARRES3,IFIT2,FCN1,CDKN1A,IFI35,TUBA1C,LHFPL2,PLSCR1,SPHK1,HLA-E,ATF3,ZFP36L1,IFIT1,NAPA,ALDOA,IFIT3,PSMA6,HSPA5,CCR1,OASL,ICAM1,EPSTI1,LY6E,PTAFR,IDO1,EMP3,IER2,XAF1,CD83,RALA,IFIH1,B4GALT5,P2RX7,TNFSF10,IL1R2,MPP1,RIPK2,GLUL,CMPK2,SNX10,DRAM1,IRF7,ZFP36,GRINA,IFI44L,TLR2,ACSL1,SOCS3,HERC5,CYSTM1,OAS2,ZC3HAV1,MIF,SIGLEC1,IFNGR2,CD36,NEXN,SLAMF7,SLC3A2,ATOX1,UBR4,P2RX4,MX2,RNF213,CLU,IL1RN,CLEC4E,VIM,GBP4,TENT5A,TMEM70,SLC25A37,CSTB,CBWD2,TNS3,ARL8B,OAS3,DEK,SRGN,ANXA5,TCIRG1,PPIB,SOCS1,SCARB2,KLF10,FYB1,DDIT3,CALM3,UPP1,HNRNPDL,PARP14,NMI,LYSMD2,PLAUR
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_Macrophage_Group3_PMID_32398875,Macrophage,LGMN,SPP1,RGS1,RNASE1,CCL18,HMOX1,C1QC,SDS,PLA2G7,ARL4C,CTSL,GPR183,NR1H3,FPR3,CTSB,FABP5,ABCA1,TTYH3,CREG1,A2M,CTSZ,TGFBI,NRP2,PLTP,GPNMB,ATP6V0C,LHFPL2,SMPDL3A,PLD3,CD163,CD84,ACP2,IFI30,MARCKS,FNIP2,LMNA,ZNF638,TMEM176B,RALA,SDC3,MPP1,TMEM176A,RNF130,IL7R,CTSD,MMP19,SOAT1,HSP90B1,CALR,MMP14,MS4A4A,CD68,RAP2B,MGLL,MFSD1,EMP3,RNASE6,GPR137B,SDSL,ANXA4,GM2A,MTRNR2L12,BASP1,CREM,ATOX1,TPM4,STAB1,LILRB4,B3GNT2,ZFP36L2,LIMS1,DCXR,GNS,ZFP36L1,CD86,IQGAP2,ATP2A2,TSPAN4,TAOK1,FAM20C,TREM2,APOE,FGL2,JUN,CD72,ATP6V1G1,HAVCR2,OAS1,EMP1,HSPA5,UGCG,EZR,CXCL2,C2,PFKFB3,GALM,KLF6,CTSA,MACF1,ATP6V1A,AHNAK,NPC1,NME2,TUBA1C,HEXB,SIGLEC1,TCN2,CD276,TXN,IFI27,ADAM8,PLPP3,IDH1,NPL,SYNGR2,SGK1,CALU,IFI44L,RHOB,MS4A6A,GNA13,PPIB,HSD3B7,VAT1,LIPA,CD99,PLEKHO1,FAM96A,ALCAM,DAB2,ACOT13,HIF1A,NEU1,SMIM3,CALM1,PLAUR,SCARB2,CSTB,NPC2,LAMP1,ADAM9,RAB31,TNS3,PDIA6,IFIH1,GLMP,ABHD12,MFSD12,SQSTM1,STAT1,ATP6V1H,IL10RA,P4HB,SOD2,PDIA3,PARP14,SIRPA,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_Macrophage_Group4_PMID_32398875,Macrophage,FABP4,CRIP1,CD52,APOC1,RETN,ALOX5AP,LYZ,CSTA,GCHFR,MARCO,HLA-DRA,C1QA,HLA-DQB1,SCD,LTA4H,ALDH2,HLA-DRB1,C1QB,APOE,RBP4,TFRC,MCEMP1,TMSB4X,SNHG25,HLA-DPB1,NUPR1,FBP1,UBB,HLA-DQA1,AC026369.3,LDHB,CD9,HLA-DRB5,NDUFB1,VSIG4,INHBA,JAML,VMO1,CES1,HLA-DMA,NDUFA11,EIF3E,S100A13,HLA-DPA1,STMN1,MSR1,NDUFA13,NDUFB8,TSPO,MGST3,TMBIM4,ACP5,MRC1,TOMM7,UQCRB,AC020656.1,LST1,CALM2,ATP1B1,COX7C,ALOX5,CFD,PDLIM1,ATP5PO,CKLF,AKR1B1,CLEC12A,NDUFA4,COMMD6,C9orf16,ARL6IP1,HLA-DMB,CD302,PHLDA3,PFDN5,PEBP1,AXL,ESRRA,FCGRT,NAP1L1,MS4A7,EVI2B,GPD1,DSTN,ATP5MPL,UBA52,TKT,NOP53,SCP2,CD74,GSTP1,DMAC1,PCOLCE2,CYP27A1,NDUFC2,TCF7L2,TREM2,ACOT7,PSMA7,LPL,VAMP8,GRN,UQCR11,C6orf48,PLA2G16,PPARG,MDH1,CAT,ATP5IF1,SEC11A,AGRP,BHLHE41,POLR2L,SMIM30,HMGN3,GYPC,GMFG,ALDH1A1,LY86,CTSS,SPN,MGST2,SH3BGRL,PTPMT1,LRPAP1,ELOB,ATP5MG,RACK1,TGM2,RSL24D1,TREM1,TCEAL8,OLR1,TNNI2,HNMT,GPNMB,44085,ABHD5,CST3,PARAL1,SVIL,COPS9,ECH1,SLC25A6,NEDD8,PPIC,HSD17B11,LGALS3BP,ACO1,DPYSL2,H2AFZ,C20orf27,EVL,MINOS1,LIPA,PSMA2,NDUFA7,UQCRH,SMIM25,TCEAL4,NENF,HINT1,CD59,ATP5MC2,HDDC2,EIF4A2,PET100,ZFAS1,S100A4,UQCRQ,TXNIP,PTMS,NBDY,CD37,LAMTOR4,EIF3L,ABCG1,FAM162A,NPM1,JPT1,COX6C,NDUFS5,RTN3,EIF3K,NDUFA2,PNPLA6,VKORC1,DOK2,SKP1,MZT2B,SRP14,TGOLN2,EIF3H,N4BP2L2,PRDX5,SOD1,STXBP2,TNFSF12,HEXA,CCNI
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_T_CCR7+ T_PMID_32398875,T cell,IL7R,LTB,CCR7,KLF2,TNFRSF4,NFKBIA,TMEM173,JUNB,TRAT1,RGS1,SOCS3,FOS,DUSP1,AQP3,CMTM6,ZFP36,TRADD,TNFRSF25,ICAM2,PABPC1,KDSR,PDE4B,FLT3LG,PIM2,CYLD,FXYD5,SARAF,TMEM123,GPR171,CXCR4,GPR183,ARID5B,TPT1,ARID5A,MAF,BIRC3,SLC2A3,RIPOR2,PPP1R15A,DGKA,PTGER2,CD69,BCL2,SELL,FAS,OCIAD2,LGALS3BP,SPOCK2,BTG1,GADD45B,CREM,SNHG8,NOP53,TNFAIP8,CISH,PIK3IP1,JUN,KLF6,SAT1,SOCS1,RNASET2,TAGAP,PNRC1,DNAJB1,UPP1,ZFAS1,SMCHD1,REXO2,MX2,GIMAP4,IFIT2,CYTH1,ZFP36L2,EEF2,IFIT3,TXNIP,SERP1,NDFIP1,MKRN1,AES,FOXP1,RCAN3,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_T_CD8 T_PMID_32398875,T cell,CD8A,CD8B,CCL5,ITGA1,CD3G,ZNF683,GZMH,GZMK,CD52,CD3D,TRAC,GZMA,CXCR6,THEMIS,CD2,JAML,CD27,LINC01871,CXCR3,CD3E,HCST,TRBC2,GRAP2,SIT1,HOPX,CKLF,TBC1D10C,PTPRCAP,RARRES3,GZMM,LAG3,ID2,FASLG,S100A4,KIAA1551,MALAT1,CLIC3,SH3BGRL3,ALOX5AP,PTPN22,PRF1,TC2N,LSP1,ABI3,LAT,EVL,PTMS,S100A6,FYB1,SUN2,GLIPR1,CST7,IKZF3,LCK,RUNX3,TRAF3IP3,LIME1,ITGAE,SLA2,AC004687.1,CAPG,TRBC1,IL32,APOBEC3G,PARP8,AKNA,STK17B,RBL2,LYAR,ZYX,CD96,RABAC1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_T_Proliferating T_PMID_32398875,T cell,STMN1,TUBA1B,HIST1H4C,TYMS,HMGB2,UBE2C,MKI67,TOP2A,HMGN2,H2AFZ,NUSAP1,CENPF,DUT,HLA-DRA,CDK1,CKS1B,CKS2,H2AFV,PCNA,BIRC5,HMGB1,CDT1,SMC4,ASPM,RRM2,PCLAF,H2AFX,FABP5,CENPM,SLC25A5,DHFR,HIST1H1B,TPX2,PTTG1,TK1,CCNA2,HLA-DRB1,HIST1H1E,CLSPN,ZWINT,PPIA,KPNA2,CDKN3,ANP32B,CARHSP1,CENPU,HIST1H3B,CENPW,ANP32E,MCM7,DEK,TMPO,UBE2T,COTL1,HMMR,GTSE1,HLA-DRB5,SMC2,CENPN,HIST1H1D,RANBP1,DTYMK,CDC20,JPT1,ATAD2,COX8A,RPA3,TMEM106C,GRN,LMNB1,CCNB1,ASF1B,CCNB2,AURKB,CENPE,CD74,RAN,NUDT1,ARL6IP1,TUBA1C,MTHFD2,MT1E,ACTG1,NUCKS1,KNL1,UBE2S,PLK1,TPI1,KIF22,HIST1H2AG,PHF19,CENPA,EZH2,YBX1,LSM4,NCAPG,PKMYT1,SNRPG,HMGB3,HSPD1,CDCA8,CCL2,PFN1,LSM5,KIFC1,RRM1,MAD2L1,FEN1,NUF2,KIF20B,DNAJC9,HLA-DQA1,SKA2,DLGAP5,GMNN,H2AFY,HLA-DQB1,HSP90AA1,HMGA1,CBX3,GINS2,MCM5,SNRPD1,CDCA5,CALM3,RAD51AP1,ATP5MC3,NCAPH,HNRNPAB,PRDX3,CHCHD2,S100A9,UHRF1,FANCI,KIF11,ANAPC11,AIF1,C12orf75,ENO1,MND1,VIM,TXN,USP1,SIVA1,SPC25,AP2S1,NME2,CEP55,LGALS1,SGO1,SNRPF,RBBP8,IMPDH2,NAP1L1,NDC80,HLA-DMA,CENPX,CACYBP,CDCA2,HLA-DPA1,NASP,DNMT1,PGAM1,CDCA3,PTMA,HLA-DPB1,SGO2,EIF2S2,NDUFB1,SHMT2,UQCRQ,HELLS,HIRIP3,BRCA1,WDR34,SLBP,PKM,NUDT21,CKAP2L,MXD3,MCM3,TALDO1,SLC25A3,BANF1,KIF23,KIF2C,FAM111A,KIF14,CTSL,CKAP2,RAD21,YEATS4,SMC3,NCAPD2,SAC3D1,CFL1,NAA38,SNRPB,CENPK,HIST1H1C
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_T_NK_PMID_32398875,NK cell,CCL4L2,CCL4,CCL3,TRDC,KLRD1,GNLY,XCL1,TYROBP,GZMB,NKG7,CTSW,FCER1G,XCL2,KLRC1,SH2D1B,KIR2DL4,PRF1,KLRC3,CD7,CST7,IFITM3,MATK,TNFRSF18,CMC1,HOPX,IL2RB,LAT2,CD63,PIK3AP1,GNPTAB,SRGN,GZMH,MAP3K8,ZNF683,DUSP2,SLA,FASLG,APOBEC3G,KLRB1,CD38,LITAF,SLC16A3,HAVCR2,CLEC2B,APMAP,IFITM2,GZMA,FOS,ID2,GSTP1,SYTL3,CLIC3,MAPK1,CEBPD,CCL5,CD247,SEMA4D,HCST,CHST12,HMGN3,SAMD3,IVNS1ABP,MBP,CCND2,GLIPR2,FLOT1,ARHGAP9,ADGRE5,PIK3R1,RUNX3,TAOK1,BHLHE40,SH2D2A,BST2,DDIT4,ZFP36L1,LYST,IRF7,CBLB,PTPN6,ACP5,PLSCR1,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_T_Treg_PMID_32398875,T cell,TNFRSF4,IL2RA,FOXP3,CTLA4,LINC01943,TNFRSF18,TIGIT,CD4,BATF,AC017002.3,LAG3,DUSP4,TNFRSF1B,IFI27,MAF,ICOS,GK,MIR4435-2HG,DNPH1,UCP2,NAMPT,TMEM173,RGS1,SPATS2L,GLRX,LIMS1,CACYBP,SRGN,CORO1B,PIM2,PKM,NDUFV2,TXN,IL32,TYMP,CREM,PIM3,SELL,CD27,CMTM6,BIRC3,NEAT1,COX5A,ENO1,CD28,UGP2,FKBP1A,SNX9,BTG3,SYNGR2,GALM,MYL6,ARID5B,FAS,SAT1,LTB,S100A4,HNRNPLL,SLAMF1,PGAM1,PHTF2,PDCD1,RAB11FIP1,JPT1,NFKBIA,PHLDA1,FRMD4B,IL6ST,SOD1,ROMO1,C12orf75,PRDX1,FTH1,ACP5,HSPA1A,ANTXR2,SUB1,PBXIP1,FURIN,PFN1,TMSB10,CD59,NOP58,C4orf48,DUSP16,CTSB,NOP10,ARPC1B,ATOX1,WARS,RHOG,ITM2A,SLC3A2,SPOCK2,NDFIP1,HSPE1,PRDM1,CFLAR,CTSC,HAVCR2,DYNLRB1,SOD2,GBP2,DESI1,HSPB1,RAP1A,SLC7A5,SNRPG,FCMR,SEM1,HSPD1,PMAIP1,SLC25A3,FXYD5,SH2D2A,SMS,CCND2,G3BP2,SRP14,TXNDC17,PPM1G,VAMP5,PARK7,SMAP2,VMP1,RAC1,ARID5A,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_T_innate T_PMID_32398875,T cell,DUSP1,KLRB1,IL7R,TMIGD2,CCR6,JUN,ZFP36L1,SPOCK2,CEBPD,RORA,CD69,CCL3L1,CXCR6,ERN1,DDIT4,HSPA5,TAGAP,PTGER2,MGAT4A,FYN,CXCR4,TSC22D3,MTRNR2L12,GCHFR,ZFP36L2,GPR171,TXNIP,DDX5,CITED2,PRF1,AQP3,HERPUD1,LINC01871,GYG1,GPR65,ODF2L,BRD2,JAML,TNFAIP3,CD6,CCNH,CCSER2,STAT4,PDCD4,TRAM1,LYAR,PNRC1,OSTF1,IER2,TRAT1,ITM2B,FKBP11,PPP2R5C,ALOX5AP,SURF4,RBL2,PIM1,BTG1,SHISA5,TUBA1A,C19orf66,UPP1,CASP1,ZFP36,SRSF7,HLA-E,SOCS1,BZW1,MYDGF,MLLT6,CD3E,CDK2AP2,HSP90B1,TTC39C,OXNAD1,CD96,CNBP,IFI44,CALR,SELENOK,HLA-C,EIF2AK2,SYNE2,OSTC,CELF2,FLT3LG,PCBP1,MYH9,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_CD8_T_Moderate_PMID_32398875,T cell,XCL1,GPR25,FASLG,MALAT1,CD8A,OASL,CXCR6,PLEKHF1,AC004687.1,TNFSF10,TNFSF14,IFIT2,HLA-A,HLA-C,TC2N,CTSW,ZNF683,IFIT1,RSAD2,IL16,LINC00861,HLA-E,OAS1,RBL2,LY9,ITGA4,ID2,STAT1,CLEC2D,KLRC1,GBP5,SCML4,ENDOD1,GIMAP7,ARHGEF3,TRAF3IP3,CISH,KIAA1551,RTP4,CD3G,MX1,GPR174,AKAP2,THEMIS,CXCR3,AHNAK,SAMD9,JAML,TXNIP,DDX58,APBB1IP,GRAP2,IRF1,CDC42EP3,PRRC2C,KCNA3,BTN3A2,TNFRSF1A,LNPEP,ANXA6,CD2,CD48,IFIT3,TBC1D10C,TRAC,PTPN6,TRG-AS1,CD3E,GSTK1,IFIT5,ABI3,CHST12,IER2,SPN,APOC1,TNFAIP8,M6PR,CMPK2,PTPRC,THUMPD3-AS1,BDP1,SUN2,HLA-F,GIMAP5,TMX4,PHF3,DTX3L,MATK,44083,ZNFX1,GCC2,PPM1K,LBH,ZRANB2,USP15,SLC9A3R1,GBP1,AKAP9,ITGB7,ZFP36L1,GIMAP1,RSRP1,TSC22D4,RAB8A,SHISA5,MIER1,TRANK1,N4BP2L2,TRIM21,STOM,DHRS7,UTRN,TRAFD1,ITGA1,SASH3,IKZF3,ANKRD12,DYNLT1,SLFN12L,ARHGAP30,SYNRG,STK17B,CALR,PTPN7,TRIM38,PNRC2,CCL5,FYB1,DDX6,PNRC1,CD52,ASF1A,APOBEC3G,RAC2,LCP1,GOLGA4,MBP,GIMAP6,ADAR,SKAP1,PDCD4,OSTF1,MYD88,HELB,DIAPH1,EVL,GZMM,RNF167,SETX,IFIH1,ERAP2,CCR1,ARHGAP15,HERC6,PRKACB,TMEM109,PRKCH,KMT2C,RHOH,44080,CD96,SYTL2,SERINC1,PARP14,OAS2,GOLGB1,DDX17,NR3C1,LSP1,TRIM56,C19orf66,TMC8,IMP3,RSF1,DOCK8,EIF5,PCM1,KMT2A,LAT,SIGIRR,GIMAP4,CNBP,REST,APOL6,THRAP3,CD46,PDIA3,FNBP1,TOR1AIP1,RCSD1,SIT1,JAK1,S100A4,PNN,BTG2,CCND3,TINF2,PCBP1,AC116407.2,BAZ1B
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19,32398875,COVID_BALF_CD8_T_Severe_PMID_32398875,T cell,FOS,CCL2,DUSP1,CCL4L2,CCL4,IFI27,NEAT1,MT1X,GNLY,CXCR4,HMGB2,MT2A,GZMB,TSC22D3,PPP1R15A,HAVCR2,CEBPD,TXN,FTL,FTH1,NFKBIA,FABP5,SRGN,ROMO1,COTL1,NAMPT,MTHFD2,H2AFV,SELL,UPP1,CTSB,FLOT1,TNFAIP3,HLA-DRA,RALA,CLIC3,SLC7A5,WARS,SUB1,MIR4435-2HG,RGS1,COX8A,NME2,SLC25A5,SERF2,HSPE1,HSP90AA1,H2AFZ,HINT1,TMSB10,UQCRQ,VAMP5,TUBA1B,SEC61G,POMP,BAX,DUT,S100A10,LGALS1,LDHA,ATP5ME,JUN,UQCRH,KLF6,GPR171,NAP1L1,CACYBP,NDUFB1,LGALS3,LSM5,LSM7,ATP5MC2,FAM177A1,UBALD2,COX7A2,CLDND1,ATP5MG,ACP5,TBCA,GNG5,RGS10,SNRPF,CYTOR,HSPD1,HMGN2,RPA3,OCIAD2,JPT1,ATP5F1E,IL7R,NDUFB11,SEC61B,ATP5MPL,NDUFS5,HNRNPH1,IFI27L2,EIF1,ATP5MF,COX6C,SDCBP,C4orf48,TMEM258,VIM,PRDX2,CTSC,UQCRB,TMEM256,CTSD,DBI,PSMA4,COX7B,MYL6,CSTB,NAP1L4,ANP32B,ETS1,CD74,NDUFA12,NOP10,GALM,PPIA,HERPUD1,PPA1,MIF,NKG7,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
