identifier,genus,species,subspecies,mutant,mutant_details,primary,heterologous_expression,kcat_val,kcat_T,kcat_pH,Kc_val,Kc_T,Kc_pH,Ko_val,Ko_T,Ko_pH,S_val,S_T,S_pH,temp,pH,pKa_used,form,PGS,taxonomy,group,note,short_ref,year
acaryochloris_de_pins_2024,Acaryochloris,sp,,FALSE,,TRUE,E. coli,5.7,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_010467950.1,de Pins 2024,2024
acaryochloris_de_pins_2025,Acaryochloris,sp,,FALSE,,FALSE,E. coli,12.3494233075793,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_010467950.1,de Pins 2025,2025
vicinus_davidi_2020,Accumulibacter,vicinus,,FALSE,,TRUE,E. coli,7.1,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Spectroscopic; accession number KFB68024.1,Davidi 2020,2020
accumulibacter_davidi_2020,Accumulibacter,sp,SK-11,FALSE,,TRUE,E. coli,1.5,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Spectroscopic; accession number EXI76444.1,Davidi 2020,2020
vicinus_de_pins_2025,Accumulibacter,vicinus,,FALSE,,FALSE,E. coli,10.2202123924794,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number KFB68024.1,de Pins 2025,2025
accumulibacter_de_pins_2025,Accumulibacter,sp,SK-11,FALSE,,FALSE,E. coli,3.40673746415981,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number EXI76444.1,de Pins 2025,2025
acetabulum_capó-bauçà_2022b,Acetabularia,acetabulum,,FALSE,,TRUE,FALSE,3.64,,,19.4,,,761,,,75.7,,,25,8.1,6.12,1B,canon,Macroalgae,Algae,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022b,2022
acidithiobacillus_davidi_2020,Acidithiobacillus,sp,,FALSE,,TRUE,E. coli,6.8,30,8,,,,,,,,,,,,na,2,,Acidithiobacillia,Bacteria,Spectroscopic; accession number WP_075323289.1,Davidi 2020,2020
ferrivorans_davidi_2020,Acidithiobacillus,ferrivorans,,FALSE,,TRUE,E. coli,3,30,8,,,,,,,,,,,,na,2,,Acidithiobacillia,Bacteria,Spectroscopic; accession number WP_014028655.1,Davidi 2020,2020
acidithiobacillus_de_pins_2024,Acidithiobacillus,sp,,FALSE,,TRUE,E. coli,3.3,30,8,,,,,,,,,,,,na,1Ac,,Acidithiobacillia,Bacteria,Accession number WP_012536704.1,de Pins 2024,2024
ferrianus_de_pins_2024,Acidithiobacillus,ferrianus,,FALSE,,TRUE,E. coli,5.2,30,8,,,,,,,,,,,,na,1Ac,,Acidithiobacillia,Bacteria,Accession number WP_163097315.1,de Pins 2024,2024
a_ferrooxidans_de_pins_2025,Acidithiobacillus,ferrooxidans,ATCC 23270,FALSE,,FALSE,E. coli,23.4213200660986,30,8,,,,,,,,,,,,na,2,,Acidithiobacillia,Bacteria,Accession number WP_012537012.1,de Pins 2025,2025
caldus_de_pins_2025,Acidithiobacillus,caldus,,FALSE,,TRUE,E. coli,20.2275036934488,30,8,,,,,,,,,,,,na,2,,Acidithiobacillia,Bacteria,Accession number WP_004872227.1,de Pins 2025,2025
acidithiobacillus_2_de_pins_2025,Acidithiobacillus,sp,,FALSE,,FALSE,E. coli,15.9690818632491,30,8,,,,,,,,,,,,na,2,,Acidithiobacillia,Bacteria,Accession number WP_075323289.1,de Pins 2025,2025
ferrianus_de_pins_2025,Acidithiobacillus,ferrianus,,FALSE,,FALSE,E. coli,11.2848178500293,30,8,,,,,,,,,,,,na,1Ac,,Acidithiobacillia,Bacteria,Accession number WP_163097315.1,de Pins 2025,2025
ferrivorans_de_pins_2025,Acidithiobacillus,ferrivorans,,FALSE,,FALSE,E. coli,10.0072913009694,30,8,,,,,,,,,,,,na,2,,Acidithiobacillia,Bacteria,Accession number WP_014028655.1,de Pins 2025,2025
acidithiobacillus_1Ac_de_pins_2025,Acidithiobacillus,sp,,FALSE,,FALSE,E. coli,7.23931711133959,30,8,,,,,,,,,,,,na,1Ac,,Acidithiobacillia,Bacteria,Accession number WP_012536704.1,de Pins 2025,2025
ferrooxidans_Holuigue_1987,Acidithiobacillus,ferrooxidans,Torma,FALSE,,TRUE,FALSE,,,,28,30,7.2,,,,,,,,,6.35,1Ac,,Gammaproteobacteria,Bacteria,,Holuigue 1987,1987
ferrooxidans_schulz_2022,Acidithiobacillus,ferrooxidans,,FALSE,,TRUE,E. coli,,,,,,,,,,17.9,,8.1,25,8,6.25,2,,Acidithiobacillia,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
ferrooxidans_tsai_2025,Acidithiobacillus,ferrooxidans,,FALSE,,TRUE,E. coli,17.1,,,282,,,,,,16.4,,8.3,25,8,6.25,2,,Acidithiobacillia,Bacteria,2 pKa model used; accession number WP_012537012.1,Tsai 2025,2025
ferrooxidans_davidi_2020_corrected,Acidithiobacillus,ferrooxidans,,FALSE,,TRUE,E. coli,15.1,,,239,,,,,,63,,8.3,25,8,6.25,2,,Acidithiobacillia,Bacteria,Corrected values from Davidi 2020; 2 pKa model used; accession number WP_012537012.1,Tsai 2025,2025
glacialis_Yeoh_1981,Aciphylla,glacialis,alpine,FALSE,,TRUE,FALSE,,,,15,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,alpine,Yeoh 1981,1981
arcta_Iñiguez_2019,Acrosiphonia,arcta,,FALSE,,TRUE,FALSE,5.08,,,52.8,,,,,,,,,25,8.1,6.11,1B,canon,Macroalgae,Algae,,Iñiguez 2019,2019
subtropicus_de_pins_2024,Actinoplanes,subtropicus,,FALSE,,TRUE,E. coli,1.9,30,8,,,,,,,,,,,,na,1Aq,,Actinomycetes,Bacteria,Accession number WP_030436772.1,de Pins 2024,2024
subtropicus_de_pins_2025,Actinoplanes,subtropicus,,FALSE,,FALSE,E. coli,4.04550073868977,30,8,,,,,,,,,,,,na,1Aq,,Actinomycetes,Bacteria,Accession number WP_030436772.1,de Pins 2025,2025
nudicaulis_hermida-carrera_2020,Aechmea,nudicaulis,var. aureorosea,FALSE,,TRUE,FALSE,6.4,,,27.4,,,,,,,,,25,8,6.23,1B,canon,CAM plants,Plants,,Hermida-Carrera 2020,2020
biuncialis_Prins_2016,Aegilops,biuncialis,,FALSE,,TRUE,FALSE,3.2,,,16.8,,,470,,,96.3,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
comosa_Prins_2016,Aegilops,comosa,,FALSE,,TRUE,FALSE,2.86,,,13.5,,,360,,,106,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
cylindrica_Prins_2016,Aegilops,cylindrica,,FALSE,,TRUE,FALSE,3.68,,,13.7,,,451,,,109,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
juvenalis_Prins_2016,Aegilops,juvenalis,,FALSE,,TRUE,FALSE,3.25,,,20.6,,,492,,,90.4,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
speltoides_Prins_2016,Aegilops,speltoides,,FALSE,,TRUE,FALSE,3.24,,,16.5,,,447,,,102,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
tauschii_Prins_2016,Aegilops,tauschii,,FALSE,,TRUE,FALSE,2.86,,,14.9,,,495,,,107,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
triuncialis_Prins_2016,Aegilops,triuncialis,,FALSE,,TRUE,FALSE,2.62,,,12.8,,,380,,,103,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
uniaristata_Prins_2016,Aegilops,uniaristata,,FALSE,,TRUE,FALSE,2.7,,,13.8,,,450,,,102,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
vavilovii_Prins_2016,Aegilops,vavilovii,,FALSE,,TRUE,FALSE,3.32,,,13.3,,,363,,,109,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
victoriae-reginae_Galmés_2014b,Agave,victoriae-reginae,,FALSE,,TRUE,FALSE,3.4,,,9.7,,,400,,,,,,25,8,6.12,1B,canon,CAM plants,Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
squarrosum_Orr_2016,Agriophyllum,squarrosum,,FALSE,,TRUE,FALSE,2.8,,,15.4,,,339,,,93.9,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
scabra_Kent_and_Tomany_1995,Agrostis,scabra,,FALSE,,TRUE,FALSE,,,,,,,,,,107.2,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
scabra_Orr_2016,Agrostis,scabra,,FALSE,,TRUE,FALSE,3.6,,,22,,,653,,,103,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
stolonifera_Orr_2016,Agrostis,stolonifera,,FALSE,,TRUE,FALSE,5.2,,,25.3,,,802,,,105,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
esculenta_Iñiguez_2019,Alaria,esculenta,,FALSE,,TRUE,FALSE,2.13,,,23.6,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
lanceolatum_capó-bauçà_2022a,Alisma,lanceolatum,,FALSE,,TRUE,FALSE,3.42,,,12.2,,,463.8,,,81.7,,,25,8.1,6.12,1B,canon,Aquatic plants,Plants,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022a,2022
alkalinema_de_pins_2024,Alkalinema,sp,RU_4_3,FALSE,,TRUE,E. coli,6.0,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NJM45070.1,de Pins 2024,2024
alkalinema_de_pins_2025,Alkalinema,sp,RU_4_3,FALSE,,FALSE,E. coli,12.9881865821092,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NJM45070.1,de Pins 2025,2025
cepa_Yeoh_1981,Allium,cepa,,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
vinosum_Iñiguez_2021,Allochromatium,vinosum,,FALSE,,FALSE,FALSE,5.3,25,,,,,,,,,,,,na,na,1Aq,,Gammaproteobacteria,Bacteria,methodology-corrected average from Iñiguez et al. 2021 across multiple strains,Iñiguez 2021,2021
vinosum_Jordan_1985,Allochromatium,vinosum,,FALSE,,TRUE,FALSE,6.7,,,37,,,290,,,41,,,25,8,6.23,1Aq,,Gammaproteobacteria,Bacteria,"crude extract combo of both carboxylases, potentially, but 1Ac is expressed in low concentrations so assuming it's 1Aq",Jordan 1985,1985
vinosum_Uemura_1996,Allochromatium,vinosum,,FALSE,,TRUE,E. coli,,,,,,,,,,44.4,25,8.3,,,na,1Aq,,Gammaproteobacteria,Bacteria,methods paper on measuring S; RbcA-B is RbcIAq,Uemura 1996,1996
vinosum_Uemura_1997,Allochromatium,vinosum,,FALSE,,TRUE,FALSE,8.8,,,28.4,,,,,,44.4,,,25,8,6.08,1Aq,,Gammaproteobacteria,Bacteria,RbcA-B is RbcIAq,Uemura 1997,1997
vinosum_Iac_Viale_1990,Allochromatium,vinosum,Strain D,FALSE,,TRUE,E. coli,6.486,,,71.6,,,,,,,,,25,7.5,6.08,1Ac,,Gammaproteobacteria,Bacteria,RbcL-S is RbcIAc,Viale 1990,1990
vinosum_Iaq_Viale_1990,Allochromatium,vinosum,Strain D,FALSE,,TRUE,E. coli,7.1,,,32.5,,,,,,,,,25,7.5,6.08,1Aq,,Gammaproteobacteria,Bacteria,RbcA-B is RbcIAq,Viale 1990,1990
macrorrhizos_Seemann_1988,Alocasia,macrorrhizos,,FALSE,,TRUE,FALSE,2.5,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Seemann 1988,1988
hybridus_Jordan_1981,Amaranthus,hybridus,,FALSE,,TRUE,FALSE,,,,16,,,640,,,82,,,25,8.3,6.23,1B,canon,C4 plants,Plants,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
hybridus_Jordan_1984,Amaranthus,hybridus,,FALSE,,TRUE,FALSE,,,,,,,,,,78,25,8.2,,,6.23,1B,canon,C4 plants,Plants,Table 3,Jordan 1984,1984
caudatus_Kubien_2008,Amaranthus,caudatus,,FALSE,,TRUE,FALSE,4.14,,,18.2,,,289,,,77.5,,8.3,25,8.1,6.25,1B,canon,C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
retroflexus_Sage_2002b,Amaranthus,retroflexus,,FALSE,,TRUE,FALSE,5.4,28,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Sage 2002b,2002
edulis_Seemann_1984,Amaranthus,edulis,,FALSE,,TRUE,FALSE,8.37,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
edulis_Yeoh_1981,Amaranthus,edulis,,FALSE,,TRUE,FALSE,,,,28,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1981,1981
degensii_de_pins_2025,Ammonifex,degensii,,FALSE,,TRUE,E. coli,3.40673746415981,30,8,,,,,,,,,,,,na,3,,Clostridia,Bacteria,Accession number WP_015739823.1,de Pins 2025,2025
neesii_Yeoh_1980,Amphibromus,neesii,,FALSE,,TRUE,FALSE,,,,19,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
bracteata_Orr_2016,Amphicarpaea,bracteata,,FALSE,,TRUE,FALSE,4,,,29,,,693,,,97.5,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
variabilis_Badger_1980,Anabaena,variabilis,,FALSE,,TRUE,FALSE,2.6931,,,293,,,1080,,,33.3,,,25,8,6.36,1Bc,canon,Cyanobacteria,Bacteria,Reported kcat_C&_O as specific activity; S reported in Tcherkez+ 2006 as 43 due to adjustment to pKa of 6.25 from 6.36,Badger 1980,1980
nidulans_Lee_1991,Anacystis,nidulans,,FALSE,,TRUE,FALSE,,,,,,,,,,37,25,8,,,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Lee 1991,1991
nidulans_P19H_Lee_1991,Anacystis,nidulans,,TRUE,P19H,TRUE,FALSE,,,,,,,,,,37,25,8,,,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Lee 1991,1991
nidulans_Cn_SS_Lee_1991,Anacystis,nidulans,,TRUE,Cn_SS,TRUE,E. coli,,,,,,,,,,35,25,8,,,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Lee 1991,1991
stellata_capó-bauçà_2022b,Anadyomene,stellata,,FALSE,,TRUE,FALSE,2.43,,,28.4,,,898,,,61.6,,,25,8.1,6.12,1B,canon,Macroalgae,Algae,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022b,2022
anaerolinea_de_pins_2025,Anaerolinea,sp,,FALSE,,TRUE,E. coli,2.76797418962984,30,8,,,,,,,,,,,,na,1’,,Anaerolineae,Metagenome,Accession number MBE2202408.1,de Pins 2025,2025
ancestral_PGM_de_Pins_2025,Ancestral,“PGM” cluster,,TRUE,reconstruction,TRUE,E. coli,33.0027691840481,30,8,,,,,,,,,,,,na,2,,Reconstruction,Bacteria,"Reconstruction of ancestor of a clade of Piscirickettsiaceae, Gallionellaceae, and Mariprofundaceae sequences",de Pins 2025,2025
ancestral_Paracoccaceae_de_Pins_2025,Ancestral,“Paracoccaceae” cluster,,TRUE,reconstruction,TRUE,E. coli,21.7179513340187,30,8,,,,,,,,,,,,na,2,,Reconstruction,Bacteria,Reconstruction of ancestor of a clade of Paracoccaceae sequences,de Pins 2025,2025
ancestral_1Anaero_Schulz_2022,Ancestral,1-Anaero,,TRUE,reconstruction; AncL,TRUE,E. coli,0.61,,,568,,,,,,21.9,,8.1,25,8,6.25,1_Anaero,,Reconstruction,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
ancestral_1Anaero_L+7_Schulz_2022,Ancestral,1-Anaero,,TRUE,reconstruction; AncL+7,TRUE,E. coli,0.63,,,499,,,,,,25.3,,8.1,25,8,6.25,1_Anaero,,Reconstruction,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
ancestral_1Anaero_L+7+4SSU_Schulz_2022,Ancestral,1-Anaero,,TRUE,reconstruction; AncL+7 + 4x AncSSU,TRUE,E. coli,0.41,,,148,,,,,,29.6,,8.1,25,8,6.25,1_Anaero,,Reconstruction,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
ancestral_1Anaero_s437w_Schulz_2022,Ancestral,1-Anaero,,TRUE,reconstruction; AncL+7 s437W,TRUE,E. coli,0.61,,,460,,,,,,25.6,,8.1,25,8,6.25,1_Anaero,,Reconstruction,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
ancestral_1Anaero_s437w+2SSU_Schulz_2022,Ancestral,1-Anaero,,TRUE,reconstruction; AncL+7 s437W + 2x AncSSU,TRUE,E. coli,0.49,,,162,,,,,,25.8,,8.1,25,8,6.25,1_Anaero,,Reconstruction,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
ancestral_1Anaero_e170n_Schulz_2022,Ancestral,1-Anaero,,TRUE,reconstruction; AncL+7 e170N,TRUE,E. coli,0.55,,,569,,,,,,25.6,,8.1,25,8,6.25,1_Anaero,,Reconstruction,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
ancestral_1Anaero_e170n+4SSU_Schulz_2022,Ancestral,1-Anaero,,TRUE,reconstruction; AncL+7 e170N + 4x AncSSU,TRUE,E. coli,0.47,,,113,,,,,,38.7,,8.1,25,8,6.25,1_Anaero,,Reconstruction,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
ancestral_1Anaero_s437w+e170n+4SSU_Schulz_2022,Ancestral,1-Anaero,,TRUE,reconstruction; AncL+7 e170N s437W + 4x AncSSU,TRUE,E. coli,0.49,,,119,,,,,,40.7,,8.1,25,8,6.25,1_Anaero,,Reconstruction,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
ancestral_1Anaero_LS_Schulz_2022,Ancestral,1-Anaero,,TRUE,reconstruction; AncLS,TRUE,E. coli,0.29,,,69,,,,,,47.3,,8.1,25,8,6.25,1_Anaero,,Reconstruction,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
Ancestral_1A_reconstruction_Shih_2016,Ancestral,1A,,TRUE,reconstruction,TRUE,E. coli,4.77,,,113,,,2010,,,54.7,,,25,8,6.11,1Ac,canon,Reconstruction,Bacteria,Ancestral reconstruction of Form IA; pKa from Iniguez et al. 2021,Shih 2016,2016
Ancestral_1B_reconstruction_Shih_2016,Ancestral,1B,,TRUE,reconstruction,TRUE,E. coli,4.72,,,120,,,641,,,49.6,,,25,8,6.11,1Bc,canon,Reconstruction,Bacteria,Ancestral reconstruction of Form IB; pKa from Iniguez et al. 2021,Shih 2016,2016
avenaceus_Yeoh_1980,Anisopogon,avenaceus,,FALSE,,TRUE,FALSE,,,,18,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
fusiformis_oh_2024,Anthoceros,fusiformis,,FALSE,,TRUE,E. coli,5.1,,,36.7,,,,,,64.5,,8.3,25,8,nf,1B,canon,Bryophytes,Plants,Kane method for Sc/o so no pKa needed; pKa for Kc not available,Oh 2024,2024
agrestis_oh_2024,Anthoceros,agrestis,,FALSE,,TRUE,E. coli,3,,,30.4,,,,,,70.9,,8.3,25,8,nf,1B,canon,Bryophytes,Plants,Kane method for Sc/o so no pKa needed; pKa for Kc not available,Oh 2024,2024
agrestis_noRbcX_oh_2024,Anthoceros,agrestis,,TRUE,ΔRbcX,TRUE,E. coli,10.5,,,34.3,,,,,,68.2,,8.3,25,8,nf,1B,,Bryophytes,Plants,Purified from a system without RbcX; Kane method for Sc/o so no pKa needed; pKa for Kc not available,Oh 2024,2024
japonicum_Ishikawa_2009,Anthoxanthum,japonicum,,FALSE,,TRUE,FALSE,1.58,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
odoratum_Yeoh_1980,Anthoxanthum,odoratum,,FALSE,,TRUE,FALSE,,,,20,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
flos-aquae_Jordan_1981,Aphanizomenon,flos-aquae,,FALSE,,TRUE,FALSE,,,,105,,,990,,,48,,,25,8.3,6.23,1Bc,canon,Cyanobacteria,Bacteria,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
feldmannii_de_pins_2024,Aphanocapsa,feldmannii,277cV,FALSE,,TRUE,E. coli,10.0,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Metagenome,Accession number TGG89950.1,de Pins 2024,2024
feldmannii_de_pins_2025,Aphanocapsa,feldmannii,277cV,FALSE,,FALSE,E. coli,21.7179513340187,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Metagenome,Accession number TGG89950.1,de Pins 2025,2025
virescens_Jordan_1983,Aphanocapsa,virescens,alpicola,FALSE,,TRUE,FALSE,,,,80,,,,,,48,,,25,8.3,6.23,1Bc,canon,Cyanobacteria,Bacteria,Table 1. genome has ccmM; assumed to be 1B as Synechocystis is closely related to Aphanocapsa,Jordan 1983,1983
thaliana_radiolabel_Boyd_2019,Arabidopsis,thaliana,,FALSE,,TRUE,FALSE,3.5,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,"radiolabel. KC, KO, and S measurements in Pa units, need conversion for use here. ",Boyd 2019,2019
thaliana_MIMS_Boyd_2019,Arabidopsis,thaliana,,FALSE,,TRUE,FALSE,3.53,25,7.7,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,"MIMS, pKa measured. kcatO measured directly.  KC, KO, and S reported with Pa units. Need conversion for inclusion here",Boyd 2019,2019
thaliana_Galmés_2014b,Arabidopsis,thaliana,,FALSE,,TRUE,FALSE,4.1,,,9.9,,,333,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from low stress environments; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
thaliana_Iñiguez_2021,Arabidopsis,thaliana,,FALSE,,FALSE,FALSE,3.2,25,,,,,,,,,,,,na,na,1B,canon,C3 plants,Plants,methodology-corrected average from Iñiguez et al. 2021 across multiple cultivars,Iñiguez 2021,2021
thaliana_oh_2024,Arabidopsis,thaliana,,FALSE,,TRUE,E. coli,2.6,,,23.1,,,,,,88.6,,8.3,25,8,nf,1B,canon,C3 plants,Plants,Kane method for Sc/o so no pKa needed; pKa for Kc not available,Oh 2024,2024
hypogaea_Sage_2002b,Arachis,hypogaea,,FALSE,,TRUE,FALSE,2.13,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sage 2002b,2002
fulgidus_Kreel_2015,Archaeoglobus,fulgidus,,FALSE,,FALSE,E. coli,23.1,,,51,,,5,,,4,,,83,8.3,nf,3,alt,Archaea,Archaea,"Points to Kreel & Tabita 2007, but no pKa given there either - calculated from Lange's handbook of Chemistry (13th edition). KC determined anaerobically. Fulgidus WT values almost identical to 2007 paper - Table indicates that they are copied.",Kreel 2015,2015
latifolia_Orr_2016,Arctagrostis,latifolia,,FALSE,,TRUE,FALSE,5.8,,,21,,,497,,,105,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
myriantha_Orr_2016,Artemisia,myriantha,,FALSE,,TRUE,FALSE,3.1,,,26.4,,,844,,,110,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
artemisia_vulgaris_Orr_2016,Artemisia,vulgaris,,FALSE,,TRUE,FALSE,3.9,,,31.9,,,626,,,105,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
arundinaria_sp_Yeoh_1980,Arundinaria,sp,,FALSE,,TRUE,FALSE,,,,26,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
donax_Yeoh_1980,Arundo,donax,,FALSE,,TRUE,FALSE,,,,16,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
lappacea_Ghannoum_2005,Astrebla,lappacea,,FALSE,,TRUE,FALSE,3.9,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
pectinata_Ghannoum_2005,Astrebla,pectinata,,FALSE,,TRUE,FALSE,5.3,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
niponicum_ito_2024,Athyrium,niponicum,,FALSE,,TRUE,FALSE,1.49,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Ito 2024,2024
undulatum_Galmés_2014b,Atrichum,undulatum,,FALSE,,TRUE,FALSE,3,,,19.2,,,806,,,,,,25,8,6.12,1B,canon,Bryophytes,Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
glabriuscula_Badger_&_Collatz_1977,Atriplex,glabriuscula,,FALSE,,TRUE,FALSE,32.6,,,48,,,499,,8.5,59.9830383480826,,,35,8.3,6.33,1B,canon,C3 plants,Plants,"KM values are probably fine, but unclear how they converted from vmax to kcat. PMID 24675672 says this one is C3. S calculated with kcat,O reported in study; pKa calculated using formula from Umreit book (6.317 at 38C, increases .005/C from 20 to 40C, increases .006 between 10 and 20C, increases .010 between 0 and 10C)",Badger & Collatz 1977,1977
patula_Badger_1974,Atriplex,patula,,FALSE,,TRUE,FALSE,,,,21,,,280,,,,,,25,8.3,6.37,1B,canon,C3 plants,Plants,pH from Badger & Andrews 1974,Badger 1974,1974
spongiosa_Badger_1974,Atriplex,spongiosa,,FALSE,,TRUE,FALSE,,,,35,,,160,,,,,,25,8.3,6.37,1B,canon,C4 plants,Plants,pH from Badger & Andrews 1974,Badger 1974,1974
patula_Hudson_1990,Atriplex,patula,,FALSE,,TRUE,FALSE,,,,9.5,30,8.0,,,,,,,,,6.17,1B,canon,C3 plants,Plants,,Hudson 1990,1990
rosea_Hudson_1990,Atriplex,rosea,,FALSE,,TRUE,FALSE,,,,17.3,30,8.0,,,,,,,,,6.17,1B,canon,C4 plants,Plants,,Hudson 1990,1990
spongiosa_Seemann_1984,Atriplex,spongiosa,,FALSE,,TRUE,FALSE,6.76,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
patula_Yeoh_1981,Atriplex,patula,,FALSE,,TRUE,FALSE,,,,19,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
suberecta_Yeoh_1981,Atriplex,suberecta,,FALSE,,TRUE,FALSE,,,,31,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1981,1981
pyrenoidosa_Yokota_and_Canvin_1986,Auxenochlorella,pyrenoidosa,,FALSE,,TRUE,FALSE,2.2,25,nf,,,,,,,,,,,,na,1B,canon,Green algae,Algae,"From Table 1 high CO2 grown; very light on methods, assumed 25C",Yokota and Canvin 1986,1986
avena_sativa_Hermida-Carrera_2016,Avena,sativa,Forridena,FALSE,,TRUE,FALSE,2.3,,8.0,10.8,,8.0,382,,,99.9,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
sativa_Kent_and_Tomany_1995,Avena,sativa,,FALSE,,TRUE,FALSE,,,,,,,,,,79.1,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
sativa_Sage_2002a,Avena,sativa,,FALSE,,TRUE,FALSE,3.632,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Cite Sage 1993,Sage 2002a,2002
avena_sativa_Yeoh_1980,Avena,sativa,,FALSE,,TRUE,FALSE,,,,20,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
compressus_Kent_and_Tomany_1995,Axonopus,compressus,,FALSE,,TRUE,FALSE,,,,,,,,,,95.3,25,7.9,,,6.12,1B,canon,C4 plants,Plants,,Kent and Tomany 1995,1995
axonopus_sp_Sharwood_2016a,Axonopus,sp,,FALSE,,TRUE,FALSE,5.6,,,18.8,,,,,,,,,25,8,nf,1B,canon,C4 plants,Plants,No methods; just cite 2008 paper,Sharwood 2016a,2016
compressus_Yeoh_1980,Axonopus,compressus,,FALSE,,TRUE,FALSE,,,,61,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
hydrophilus_davidi_2020,Azonexus,hydrophilus,,FALSE,,TRUE,E. coli,7.6,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Spectroscopic; accession number WP_028995230.1,Davidi 2020,2020
hydrophilus_de_pins_2025,Azonexus,hydrophilus,,FALSE,,FALSE,E. coli,17.033687320799,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number WP_028995230.1,de Pins 2025,2025
oleiclasticum_de_pins_2024,Azospirillum,oleiclasticum,,FALSE,,TRUE,E. coli,2.0,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Bacteria,Accession number WP_180281710.1,de Pins 2024,2024
oleiclasticum_de_pins_2025,Azospirillum,oleiclasticum,,FALSE,,FALSE,E. coli,4.47134292170975,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Bacteria,Accession number WP_180281710.1,de Pins 2025,2025
bathyomphala_Valegård_2018,Bacterosira,bathyomphala,,FALSE,,TRUE,FALSE,4.543,,,81,,,1300,,,87,,8.1,25,8.2,6.11,1D,canon,Diatoms,Algae,pH from Carmo-Silva et al. 2010,Valegård 2018,2018
horologicalis_Young_2016,Bellerochea,horologicalis,CS-874/01,FALSE,,TRUE,FALSE,2.1,,,50,,,764,,,,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
vulgaris_marcosii_Galmés_2005,Beta,vulgaris,marcosii,FALSE,,TRUE,FALSE,,,,,,,,,,96.3,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
vulgaris_maritima_Galmés_2005,Beta,vulgaris,maritima,FALSE,,TRUE,FALSE,,,,,,,,,,92.9,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
beta_vulgaris_Hermida-Carrera_2016,Beta,vulgaris,Detroit,FALSE,,TRUE,FALSE,2,,8.0,10.8,,8.0,357,,,101,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
beta_vulgaris_Orr_2016,Beta,vulgaris,vulgaris,FALSE,,TRUE,FALSE,3.8,,,17,,,401,,,97.8,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0.",Orr 2016,2016
cycloptera_Rosnow_2015,Bienertia,cycloptera,,FALSE,,TRUE,FALSE,3.9,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Rosnow 2015,2015
sinuspersici_Rosnow_2015,Bienertia,sinuspersici,,FALSE,,TRUE,FALSE,3.46,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Rosnow 2015,2015
javanica_sakata_2024,Bischofia,javanica,,FALSE,,TRUE,FALSE,,,,,,,,,,72.1,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
biloba_Ghannoum_2005,Bothriochloa,biloba,,FALSE,,TRUE,FALSE,6,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
bladhi_Ghannoum_2005,Bothriochloa,bladhi,,FALSE,,TRUE,FALSE,6.2,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
macra_Yeoh_1980,Bothriochloa,macra,,FALSE,,TRUE,FALSE,,,,51,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
lorentziana_Yeoh_1980,Brachiaria,lorentziana,,FALSE,,TRUE,FALSE,,,,28,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
distachyon_Prins_2016,Brachypodium,distachyon,,FALSE,,TRUE,FALSE,2.05,,,11.9,,,396,,,111,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
japonicum_Horken_and_Tabita_1998,Bradyrhizobium,japonicum,,FALSE,,TRUE,R. sphaeroides,3.2,,,66,,,,,,74.8,25,8,30,7.6,nf,1C,,Alphaproteobacteria,Bacteria,,Horken and Tabita 1998,1998
brassica_oleracea_Hermida-Carrera_2016,Brassica,oleracea,var italica,FALSE,,TRUE,FALSE,2.1,,8.0,11.8,,8.0,411,,,96.2,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
lithotrophica_22653_de_pins_2024,Brockia,lithotrophica,DSM 22653 Ga0215696_105,FALSE,,TRUE,E. coli,1.5,30,8,,,,,,,,,,,,na,1E,,Bacilli,Bacteria,Accession number WP_121444813.1,de Pins 2024,2024
lithotrophica_de_pins_2024,Brockia,lithotrophica,,FALSE,,TRUE,E. coli,1.3,30,8,,,,,,,,,,,,na,1E,,Bacilli,Metagenome,Accession number MBE3550083.1,de Pins 2024,2024
lithotrophica_22653_de_pins_2025,Brockia,lithotrophica,DSM 22653 Ga0215696_105,FALSE,,FALSE,E. coli,3.19381637264982,30,8,,,,,,,,,,,,na,1E,,Bacilli,Bacteria,Accession number WP_121444813.1,de Pins 2025,2025
lithotrophica_de_pins_2025,Brockia,lithotrophica,,FALSE,,FALSE,E. coli,2.55505309811985,30,8,,,,,,,,,,,,na,1E,,Bacilli,Metagenome,Accession number MBE3550083.1,de Pins 2025,2025
inermis_Ishikawa_2009,Bromus,inermis,,FALSE,,TRUE,FALSE,1.73,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
arenarius_Kent_and_Tomany_1995,Bromus,arenarius,,FALSE,,TRUE,FALSE,,,,,,,,,,94,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
inermis_Kent_and_Tomany_1995,Bromus,inermis,,FALSE,,TRUE,FALSE,,,,,,,,,,90,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
pseudodanthoniae_Kent_and_Tomany_1995,Bromus,pseudodanthoniae,,FALSE,,TRUE,FALSE,,,,,,,,,,101.7,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
anomalus_Orr_2016,Bromus,anomalus,,FALSE,,TRUE,FALSE,2.9,,,16.9,,,494,,,101,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
erectus_Sage_1997,Bromus,erectus,,FALSE,,TRUE,FALSE,2.5,25,8.0,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Cite Sage 1993,Sage 1997,1997
arenarius_Yeoh_1980,Bromus,arenarius,,FALSE,,TRUE,FALSE,,,,16,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
unioloides_Yeoh_1980,Bromus,unioloides,,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
davidii_Yeoh_1981,Buddleia,davidii,,FALSE,,TRUE,FALSE,,,,10,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
refractus_Yeoh_1980,Bymbopogon,refractus,,FALSE,,TRUE,FALSE,,,,52,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
longiseta_Ishikawa_2009,Calamagrostis,longiseta,,FALSE,,TRUE,FALSE,1.92,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
arundinacea_Orr_2016,Calamagrostis,arundinacea,,FALSE,,TRUE,FALSE,4.1,,,22.7,,,614,,,104,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
calamagrostis_canescens_Orr_2016,Calamagrostis,canescens,,FALSE,,TRUE,FALSE,2.5,,,15.2,,,594,,,98.5,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
foliosa_Orr_2016,Calamagrostis,foliosa,,FALSE,,TRUE,FALSE,3.5,,,20.9,,,330,,,105,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
inexpansa_Orr_2016,Calamagrostis,inexpansa,,FALSE,,TRUE,FALSE,3.3,,,18.8,,,608,,,111,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
nutkaensis_Orr_2016,Calamagrostis,nutkaensis,,FALSE,,TRUE,FALSE,3.1,,,20.1,,,601,,,109,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
annuum_Hermida-Carrera_2016,Capsicum,annuum,Picante,FALSE,,TRUE,FALSE,1.9,,8.0,9.6,,8.0,243,,,96,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
chinense_Sage_2002b,Capsicum,chinense,,FALSE,,TRUE,FALSE,1.99,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sage 2002b,2002
edulis_Galmés_2014b,Carpobrotus,edulis,,FALSE,,TRUE,FALSE,3.6,,,9.5,,,313,,,,,,25,8,6.12,1B,canon,CAM plants,Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
cunninghamiana_Yeoh_1981,Casuarina,cunninghamiana,,FALSE,,TRUE,FALSE,,,,14,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
deodara_sugawara_2025,Cedrus,deodara,,FALSE,,TRUE,FALSE,1.21,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Sugawara 2025,2025
ciliaris_Ghannoum_2005,Cenchrus,ciliaris,,FALSE,,TRUE,FALSE,6.1,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
clandestinus_Ghannoum_2005,Cenchrus,clandestinus,,FALSE,,TRUE,FALSE,6.4,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
purpureus_Ishikawa_2009,Cenchrus,purpureus,,FALSE,,TRUE,FALSE,3.92,,,37.2,,,,,,,,,28,8.2,nf,1B,canon,C4 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
americanus_Seemann_1984,Cenchrus,americanus,,FALSE,,TRUE,FALSE,7.56,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
ciliaris_Sharwood_2016b,Cenchrus,ciliaris,,FALSE,,TRUE,FALSE,6,,,19,,,470,,,69.9,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
siliqua_Delgado_1993,Ceratonia,siliqua,,FALSE,,TRUE,FALSE,,,,,,,,,,98.1,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Delgado 1993,1995
demersum_capó-bauçà_2022a,Ceratophyllum,demersum,,FALSE,,TRUE,FALSE,3.61,,,14.9,,,525.5,,,82.7,,,25,8.1,6.12,1B,canon,Basal angiosperms,Plants,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022a,2022
demersum_Galmés_2014b,Ceratophyllum,demersum,,FALSE,,TRUE,FALSE,3.5,,,13.6,,,317,,,,,,25,8,6.12,1B,canon,Bryophytes,Plants,Aquatic macrophyte using HCO3-; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
thalictroides_Yeoh_1981,Ceratopteris,thalictroides,,FALSE,,TRUE,FALSE,,,,16,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
azotoformans_de_pins_2024,Cereibacter,azotoformans,,FALSE,,TRUE,E. coli,2.1,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Bacteria,Accession number WP_108221872.1,de Pins 2024,2024
sphaeroides1_de_pins_2025,Cereibacter,sphaeroides,,FALSE,,TRUE,E. coli,22.5696357000587,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_011339170.1,de Pins 2025,2025
johrii_de_pins_2025,Cereibacter,johrii,,FALSE,,TRUE,E. coli,22.5696357000587,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_069331322.1,de Pins 2025,2025
sphaeroides_SCJ_de_pins_2025,Cereibacter,sphaeroides,SCJ,FALSE,,TRUE,E. coli,19.3758193274089,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_119004344.1,de Pins 2025,2025
ovatus_de_pins_2025,Cereibacter,ovatus,,FALSE,,TRUE,E. coli,19.1628982358989,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_097030133.1,de Pins 2025,2025
sphaeroides2_de_pins_2025,Cereibacter,sphaeroides,,FALSE,,TRUE,E. coli,19.1628982358989,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_124257644.1,de Pins 2025,2025
sphaeroides3_de_pins_2025,Cereibacter,sphaeroides,,FALSE,,TRUE,E. coli,18.9499771443889,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_002723913.1,de Pins 2025,2025
sphaeroides4_de_pins_2025,Cereibacter,sphaeroides,,FALSE,,TRUE,E. coli,18.7370560528789,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number P29278.3,de Pins 2025,2025
azotoformans_2_de_pins_2025,Cereibacter,azotoformans,,FALSE,,TRUE,E. coli,15.1173974972091,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_011911067.1; matches multiple strains,de Pins 2025,2025
cereibacter_de_pins_2025,Cereibacter,sp,,FALSE,,TRUE,E. coli,14.2657131311692,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_117345184.1; matches multiple species,de Pins 2025,2025
azotoformans_1Aq_de_pins_2025,Cereibacter,azotoformans,,FALSE,,FALSE,E. coli,4.68426401321973,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Bacteria,Accession number WP_108221872.1,de Pins 2025,2025
sphaeroides_2_Gibson_1977,Cereibacter,sphaeroides,,FALSE,,TRUE,FALSE,2.64,25,7.2,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,,Gibson 1977,1977
sphaeroides_IC_Gibson_1977,Cereibacter,sphaeroides,,FALSE,,TRUE,FALSE,3.42,25,8.0,,,,,,,,,,,,na,1C,,Alphaproteobacteria,Bacteria,,Gibson 1977,1977
sphaeroides_Horken_and_Tabita_1998,Cereibacter,sphaeroides,,FALSE,,TRUE,FALSE,2.9,,,22,,,,,,55.7,25,8,30,7.6,nf,1C,,Alphaproteobacteria,Bacteria,,Horken and Tabita 1998,1998
sphaeroides_2_Jordan_1981,Cereibacter,sphaeroides,,FALSE,,TRUE,FALSE,,,,80,,,220,,,9,,,25,8.3,6.23,2,,Alphaproteobacteria,Bacteria,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
sphaeroides_IC_Jordan_1981,Cereibacter,sphaeroides,,FALSE,,TRUE,FALSE,,,,36,,,840,,,62,,,25,8.3,6.23,1C,,Alphaproteobacteria,Bacteria,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
sphaeroides_Lee_1991,Cereibacter,sphaeroides,,FALSE,,TRUE,FALSE,,,,,,,,,,9,25,8,,,6.12,2,,Alphaproteobacteria,Bacteria,,Lee 1991,1991
sphaeroides_Lee_G.J._1993,Cereibacter,sphaeroides,,FALSE,,TRUE,FALSE,,,,,,,,,,63,25,8,,,6.15,1C,,Alphaproteobacteria,Bacteria,,Lee G.J. 1993,1993
sphaeroides_Zhou_2019,Cereibacter,sphaeroides,,FALSE,,TRUE,E. coli,3.7,,,60,,,1724,,,58,,8.1,25,8,6.25,1C,,Alphaproteobacteria,Bacteria,pKa & pH from Wilson et al. 2018,Zhou 2019,2019
socialis_Haslam_2005,Chaetoceros,socialis,,FALSE,,TRUE,FALSE,,,,,,,,,,92,25,8.2,,,6.2,1D,canon,Diatoms,Algae,References Parry 1989 for S measurement,Haslam 2005,2005
calcitrans_CCMP1315_Young_2016,Chaetoceros,calcitrans,CCMP1315,FALSE,,TRUE,FALSE,2.6,,,25,,,413,,,57,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
calcitrans_CS178_Young_2016,Chaetoceros,calcitrans,CS-178,FALSE,,TRUE,FALSE,3.4,,,31,,,490,,,75,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
muelleri_Young_2016,Chaetoceros,muelleri,CCMP1316,FALSE,,TRUE,FALSE,2.4,,,23,,,425,,,96,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
polymorphus_de_pins_2024,Chamaesiphon,polymorphus,,FALSE,,TRUE,E. coli,7.5,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_106306271.1,de Pins 2024,2024
polymorphus_de_pins_2025,Chamaesiphon,polymorphus,,FALSE,,FALSE,E. coli,16.182002954759,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_106306271.1,de Pins 2025,2025
chara_sp_Yeoh_1981,Chara,sp,,FALSE,,TRUE,FALSE,,,,42,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
majus_Kent_and_Tomany_1995,Chelidonium,majus,,FALSE,,TRUE,FALSE,,,,,,,,,,100.5,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
album_Kubien_2008,Chenopodium,album,,FALSE,,TRUE,FALSE,2.91,,,11.2,,,415,,,78.7,,8.3,25,8.1,6.25,1B,canon,C3 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
murale_Orr_2016,Chenopodium,murale,,FALSE,,TRUE,FALSE,4.4,,,23.8,,,354,,,109,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
petiolare_Orr_2016,Chenopodium,petiolare,,FALSE,,TRUE,FALSE,4.4,,,25.6,,,589,,,98.5,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
album_Sage_2002b,Chenopodium,album,,FALSE,,TRUE,FALSE,3.71,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sage 2002b,2002
reinhardtii_68-4PP_Chen_1988,Chlamydomonas,reinhardtii,,TRUE,68-4PP,TRUE,FALSE,,,,37,,,664,,,54,,,25,8,6.23,1B,canon,Green algae,Algae,pKa from Jordan & Ogren 1983 since they cite Jordan & Ogren 1981,Chen 1988,1988
reinhardtii_Chen_1988,Chlamydomonas,reinhardtii,,FALSE,,TRUE,FALSE,,,,29,,,412,,,62,,,25,8,6.23,1B,canon,Green algae,Algae,pKa from Jordan & Ogren 1983 since they cite Jordan & Ogren 1981,Chen 1988,1988
reinhardtii_Du_and_Spreitzer_2000,Chlamydomonas,reinhardtii,,FALSE,,TRUE,FALSE,2.655,,,32,,,559,,,63,,,25,8.3,6.2,1B,canon,Green algae,Algae,Cite Jordan & Ogren 1981 so used that pKa & pH; kcat converted from specific activity in umol/h/mg using .0191 conversion factor,Du and Spreitzer 2000,2000
reinhardtii_Genkov_and_Spreitzer_2009,Chlamydomonas,reinhardtii,,FALSE,,TRUE,Chlamydomonas,2.427,,,31,,,527,,,60,,,25,8,6.23,1B,canon,Green algae,Algae,pH & pKa same as Chen 1988 since they cite that for methods,Genkov and Spreitzer 2009,2009
reinhardtii_goudet_2020,Chlamydomonas,reinhardtii,,FALSE,,TRUE,FALSE,3.25,,,39.6,,,,,,,,,25,8.2,6.11,1B,canon,Green algae,Algae,,Goudet 2020,2020
reinhardtii_Iñiguez_2021,Chlamydomonas,reinhardtii,,FALSE,,FALSE,FALSE,2.3,,,30.9,,,485,,,66.1,,,25,na,na,1B,canon,Green algae,Algae,methodology-corrected average from Iñiguez et al. 2021 across multiple strains,Iñiguez 2021,2021
reinhardtii_Jordan_1981,Chlamydomonas,reinhardtii,,FALSE,,TRUE,FALSE,,,,29,,,480,,,61,,,25,8.3,6.23,1B,canon,Green algae,Algae,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
reinhardtii_Satagopan_and_Spreitzer_2008,Chlamydomonas,reinhardtii,,FALSE,,TRUE,FALSE,2.274,,,34,,,417,,,61,,,25,8,6.14,1B,canon,Green algae,Algae,,Satagopan and Spreitzer 2008,2008
reinhardtii_Seemann_1984,Chlamydomonas,reinhardtii,,FALSE,,TRUE,FALSE,7.68,30,8.2,,,,,,,,,,,,na,1B,canon,Green algae,Algae,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
reinhardtii_Uemura_1996,Chlamydomonas,reinhardtii,,FALSE,,TRUE,FALSE,,,,,,,,,,70.5,25,8.3,,,na,1B,canon,Green algae,Algae,methods paper on measuring S,Uemura 1996,1996
pyrenoidosa_Kent_and_Tomany_1984,Chlorella,pyrenoidosa,,FALSE,,TRUE,FALSE,,,,,,,,,,31,25,7.9,,,nf,1B,canon,Green algae,Algae,,Kent and Tomany 1984,1984
gayana_Kent_and_Tomany_1995,Chloris,gayana,,FALSE,,TRUE,FALSE,,,,,,,,,,79.1,25,7.9,,,6.12,1B,canon,C4 plants,Plants,,Kent and Tomany 1995,1995
gayana_Seemann_1984,Chloris,gayana,,FALSE,,TRUE,FALSE,6.30,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
truncata_Yeoh_1980,Chloris,truncata,,FALSE,,TRUE,FALSE,,,,34,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
velia_davidi_2020,Chromera,velia,,FALSE,,TRUE,E. coli,8.2,30,8,,,,,,,,,,,,na,2,,Chromerida,Algae,Spectroscopic; accession number ADJ38508.1,Davidi 2020,2020
velia_de_pins_2025,Chromera,velia,,FALSE,,FALSE,E. coli,18.5241349613689,30,8,,,,,,,,,,,,na,2,,Chromerida,Algae,Accession number ADJ38508.1,de Pins 2025,2025
thermalis_aguiló-nicolau_2023,Chroococcidiopsis,thermalis,KOMAREK 1964/111,FALSE,,TRUE,FALSE,9.1,,,87.3,,,1162.6,,,66,,8.3,25,8.1,6.11,1Bc,canon,Cyanobacteria,Bacteria,Kane method for Sc/o so no pKa needed,Aguiló-Nicolau 2023,2023
indicum_Orr_2016,Chrysanthellum,indicum,afroamericanum,FALSE,,TRUE,FALSE,4.7,,,28.1,,,598,,,82.4,,8.2,25,8,6.11,1B,canon,C4 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
albidus_Galmés_2005,Cistus,albidus,,FALSE,,TRUE,FALSE,,,,,,,,,,92.1,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
ecirrhosus_Orr_2016,Citrullus,ecirrhosus,,FALSE,,TRUE,FALSE,3.1,,,18.9,,,544,,,99.9,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
lanatus_Orr_2016,Citrullus,lanatus,lanatus,FALSE,,TRUE,FALSE,2.5,,,19.4,,,510,,,107,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
clemantis_sp_Yeoh_1981,Clemantis,sp,,FALSE,,TRUE,FALSE,,,,12,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
coccomyxa_sp_Palmqvist_1995,Coccomyxa,sp,Schmidle,FALSE,,TRUE,FALSE,,,,12,,,,,,82.9,,,25,8.3,nf,1B,canon,Green algae,Algae,Sc/o done as in Kane 1994 so no pKa needed for it,Palmqvist 1995,1995
fragile_Yeoh_1981,Codium,fragile,,FALSE,,TRUE,FALSE,,,,43,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
arabica_Hermida-Carrera_2016,Coffea,arabica,Catuai Vermelho IAC 44,FALSE,,TRUE,FALSE,2.1,,8.0,11,,8.0,238,,,98.7,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
scutata_goudet_2020,Coleochaete,scutata,,FALSE,,TRUE,FALSE,1.67,,,43.1,,,,,,,,,25,8.2,6.11,1B,canon,Green algae,Algae,,Goudet 2020,2020
quitensis_Saez_2017,Colobanthus,quitensis,,FALSE,,TRUE,FALSE,3.8,,8.0,,,,,,,97.1,,8.2,25,,6.11,1B,canon,C3 plants,Plants,"Sc/o as in Gago 2013, kcat as in Galmes 2014b",Sáez 2017,2017
comamonas_de_pins_2024,Comamonas,sp,SCN 65-56,FALSE,,TRUE,E. coli,0.9,30,8,,,,,,,,,,,,na,1C,,Betaproteobacteria,Metagenome,Accession number ODS92108.1,de Pins 2024,2024
badia_de_pins_2024,Comamonas,badia,,FALSE,,TRUE,E. coli,0.8,30,8,,,,,,,,,,,,na,1C,,Betaproteobacteria,Bacteria,Accession number WP_024537032.1,de Pins 2024,2024
comamonas_de_pins_2025,Comamonas,sp,SCN 65-56,FALSE,,FALSE,E. coli,1.91628982358989,30,8,,,,,,,,,,,,na,1C,,Betaproteobacteria,Metagenome,Accession number ODS92108.1,de Pins 2025,2025
badia_de_pins_2025,Comamonas,badia,,FALSE,,FALSE,E. coli,1.7033687320799,30,8,,,,,,,,,,,,na,1C,,Betaproteobacteria,Bacteria,Accession number WP_024537032.1,de Pins 2025,2025
selloana_Yeoh_1980,Cortaderia,selloana,,FALSE,,TRUE,FALSE,,,,14,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
subtumidum_goudet_2020,Cosmarium,subtumidum,,FALSE,,TRUE,FALSE,2.51,,,45.3,,,,,,,,,25,8.2,6.11,1B,canon,Green algae,Algae,,Goudet 2020,2020
triasii_Galmés_2005,Crepis,triasii,,FALSE,,TRUE,FALSE,,,,,,,,,,94.8,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
maritimum_Galmés_2014b,Crithmum,maritimum,,FALSE,,TRUE,FALSE,3.4,,,8.7,,,183,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from environments with high osmotic and heat stress; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
maxima_Hermida-Carrera_2016,Cucurbita,maxima,Totanera,FALSE,,TRUE,FALSE,2.2,,8.0,9,,8.0,228,,,98.4,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
necator_PHB-4_Bowien_1976,Cupriavidus,necator,"H16 mutant PHB- 4, DSM 541",TRUE,PHB-4,TRUE,FALSE,1.78776,,,66,,,,,,,,,30,7.8,nf,1C,canon,Betaproteobacteria,Bacteria,,Bowien 1976,1976
necator_Lee_1991,Cupriavidus,necator,,FALSE,,TRUE,FALSE,,,,,,,,,,74,25,8,,,6.12,1C,canon,Betaproteobacteria,Bacteria,,Lee 1991,1991
delicatus_davidi_2020,Curvibacter,delicatus,,FALSE,,TRUE,E. coli,4.7,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Spectroscopic; accession number WP_066708018.1,Davidi 2020,2020
delicatus_de_pins_2025,Curvibacter,delicatus,,FALSE,,FALSE,E. coli,14.2657131311692,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number WP_066708018.1,de Pins 2025,2025
merolae_steensma_2025,Cyanidioschyzon,merolae,,FALSE,,TRUE,FALSE,1.6,,,11.7,,,1237.8,,,,,,25,8,6.11,1D,canon,Red algae,Algae,,Steensma 2025,2025
caldarium_Uemura_1997,Cyanidium,caldarium,,FALSE,,TRUE,FALSE,1.3,,,6.7,,,,,,225,,,25,8,6.08,1D,canon,Red algae,Algae,,Uemura 1997,1997
cyanobium_de_pins_2024,Cyanobium,sp,,FALSE,,TRUE,E. coli,9.8,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Metagenome,Accession number GDX72213.1,de Pins 2024,2024
cyanobium_baikal-g2_de_pins_2024,Cyanobium,sp,Baikal-G2,FALSE,,TRUE,E. coli,12.6,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number PHX68273.1,de Pins 2024,2024
cyanobium_nies-981_de_pins_2024,Cyanobium,sp,NIES-981,FALSE,,TRUE,E. coli,10.4,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_087067354.1,de Pins 2024,2024
cyanobium_baikal-g2_de_pins_2025,Cyanobium,sp,Baikal-G2,FALSE,,FALSE,E. coli,27.2538997132784,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number PHX68273.1,de Pins 2025,2025
cyanobium_nies-981_de_pins_2025,Cyanobium,sp,NIES-981,FALSE,,FALSE,E. coli,22.5696357000587,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_087067354.1,de Pins 2025,2025
cyanobium_de_pins_2025,Cyanobium,sp,,FALSE,,FALSE,E. coli,21.0791880594888,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Metagenome,Accession number GDX72213.1,de Pins 2025,2025
PCC7001_no_carboxysome_shell_Long_2018,Cyanobium,PCC7001,,TRUE,no carboxysome shell,TRUE,Tobacco,9.8,,,158,,,,,,55,,8.3,25,8,6.25,1Ac,canon,Cyanobacteria,Bacteria,Assays in tobacco leaf lysate; no pKa needed for specificity; pKa for Kc from Sharwood et al. 2016,Long 2018,2018
PCC7001_brokencarb_intobacco_Long_2018,Cyanobium,PCC7001,,FALSE,,TRUE,Tobacco,9.4,,,169,,,,,,,,,25,8,6.25,1Ac,canon,Cyanobacteria,Bacteria,Assays in tobacco leaf lysate; carboxysomes broken open; pKa for Kc from Sharwood et al. 2016,Long 2018,2018
PCC7001_intactcarb_Long_2018,Cyanobium,PCC7001,,FALSE,,TRUE,FALSE,10.4,25,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Purified intact carboxysomes from Cyanobium,Long 2018,2018
PCC7001_brokencarb_Long_2018,Cyanobium,PCC7001,,FALSE,,TRUE,FALSE,9.5,25,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Purified carboxysomes from Cyanobium; carboxysomes broken open,Long 2018,2018
cyanobium_sp_Whitehead_2014,Cyanobium,sp,7001,FALSE,,TRUE,FALSE,9,,,169,,,,,,,,,25,8,6.251,1Ac,canon,Cyanobacteria,Bacteria,Cite Whitney & Sharwood 2007 for methods,Whitehead 2014,2014
panzhihuaensis_Galmés_2014b,Cycas,panzhihuaensis,,FALSE,,TRUE,FALSE,3.1,,,8.8,,,525,,,,,,25,8,6.12,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
cylindrotheca_sp_Read_1992b,Cylindrotheca,sp,N1,FALSE,,TRUE,FALSE,0.97,,,33,,,631,,,107.1,,,25,8,6.12,1D,canon,Diatoms,Algae,,Read 1992b,1992
fusiformis_Read_1994,Cylindrotheca,fusiformis,,FALSE,,TRUE,FALSE,1.95,,,36,,,568,,,111,,,25,8,6.12,1D,canon,Diatoms,Algae,,Read 1994,1994
cylindrotheca_sp_Read_1994,Cylindrotheca,sp,N1,FALSE,,TRUE,FALSE,0.78,,,31,,,1290,,,106,,,25,8,6.12,1D,canon,Diatoms,Algae,,Read 1994,1994
fusiformis_Young_2016,Cylindrotheca,fusiformis,CS-13,FALSE,,TRUE,FALSE,3.7,,,,,,,,,79,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
nodosa_capó-bauçà_2022a,Cymodocea,nodosa,,FALSE,,TRUE,FALSE,2.75,,,25.7,,,983.9,,,90.4,,,25,8.1,6.12,1B,canon,Aquatic plants,Plants,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022a,2022
dactylon_Carmo-Silva_2010,Cynodon,dactylon,,FALSE,,TRUE,FALSE,4,,,21,,,402,,,89.2,,,25,8.2,6.11,1B,canon,C4 plants,Plants,,Carmo-Silva 2010,2010
echinatus_Yeoh_1980,Cynosurus,echinatus,,FALSE,,TRUE,FALSE,,,,24,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
eragrostis_Yeoh_1981,Cyperus,eragrostis,,FALSE,,TRUE,FALSE,,,,15,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
rutilans_Yeoh_1981,Cyperus,rutilans,,FALSE,,TRUE,FALSE,,,,34,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1981,1981
glomerata_Galmés_2014b,Dactylis,glomerata,Porto,FALSE,,TRUE,FALSE,3.2,,,10.7,,,453,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from low stress environments; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
glomerata_Ishikawa_2009,Dactylis,glomerata,,FALSE,,TRUE,FALSE,1.59,,,,,,,,,,,,28,8.2,na,1B,canon,C3 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
pallida_Yeoh_1980,Danthonia,pallida,,FALSE,,TRUE,FALSE,,,,19,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
aromatica_davidi_2020,Dechloromonas,aromatica,,FALSE,,TRUE,E. coli,7.2,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Spectroscopic; accession number WP_011289362.1,Davidi 2020,2020
aromatica_de_pins_2025,Dechloromonas,aromatica,,FALSE,,FALSE,E. coli,15.9690818632491,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number WP_011289362.1,de Pins 2025,2025
danthonioides_Orr_2016,Deschampsia,danthonioides,,FALSE,,TRUE,FALSE,4.5,,,22.3,,,580,,,108,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
antarctica_Saez_2017,Deschampsia,antarctica,,FALSE,,TRUE,FALSE,4.1,,8.0,,,,,,,99.5,,8.2,25,,6.11,1B,canon,C3 plants,Plants,"Sc/o as in Gago 2013, kcat as in Galmes 2014b",Sáez 2017,2017
aculeata_Iñiguez_2019,Desmarestia,aculeata,,FALSE,,TRUE,FALSE,1.37,,,13.3,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
cinereum_Orr_2016,Desmodium,cinereum,,FALSE,,TRUE,FALSE,3,,,12.8,,,403,,,97.5,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
intortum_Orr_2016,Desmodium,intortum,,FALSE,,TRUE,FALSE,3.3,,,14.2,,,394,,,98.7,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
psilocarpum_Orr_2016,Desmodium,psilocarpum,,FALSE,,TRUE,FALSE,3.6,,,15.6,,,452,,,95.9,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
thioautotrophicum_davidi_2020,Desulfonatronum,thioautotrophicum,,FALSE,,TRUE,E. coli,2.4,30,8,,,,,,,,,,,,na,2,,Desulfovibrionia,Bacteria,Spectroscopic; accession number WP_045218222.1,Davidi 2020,2020
thioautotrophicum_de_pins_2025,Desulfonatronum,thioautotrophicum,,FALSE,,FALSE,E. coli,5.74886947076968,30,8,,,,,,,,,,,,na,2,,Desulfovibrionia,Bacteria,Accession number WP_045218222.1,de Pins 2025,2025
putei_davidi_2020,Desulforamulus,putei,,FALSE,,TRUE,E. coli,1.2,30,8,,,,,,,,,,,,na,2,,Clostridia,Bacteria,Spectroscopic; accession number WP_073240254.1,Davidi 2020,2020
putei_de_pins_2025,Desulforamulus,putei,,FALSE,,FALSE,E. coli,4.04550073868977,30,8,,,,,,,,,,,,na,2,,Clostridia,Bacteria,Accession number WP_073240254.1,de Pins 2025,2025
ramentacea_Iñiguez_2019,Devaleraea,ramentacea,,FALSE,,TRUE,FALSE,2.59,,,17.5,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
quadriseta_Yeoh_1980,Deyeuxia,quadriseta,,FALSE,,TRUE,FALSE,,,,25,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
sericeum_Ghannoum_2005,Dichanthium,sericeum,,FALSE,,TRUE,FALSE,6.1,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
sericeum_Sharwood_2016a,Dichanthium,sericeum,,FALSE,,TRUE,FALSE,5.7,,,25.5,,,,,,,,,25,8,nf,1B,canon,C4 plants,Plants,No methods; just cite 2008 paper,Sharwood 2016a,2016
fasciola_capó-bauçà_2022b,Dictyota,fasciola,,FALSE,,TRUE,FALSE,2.07,,,17.3,,,1327,,,126.1,,,25,8.1,6.12,1D,canon,Macroalgae,Algae,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022b,2022
minor_minor_Galmés_2005,Digitalis,minor,minor,FALSE,,TRUE,FALSE,,,,,,,,,,91,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
minor_palaui_Galmés_2005,Digitalis,minor,palaui,FALSE,,TRUE,FALSE,,,,,,,,,,97.1,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
sanguinalis_Sage_2002b,Digitaria,sanguinalis,,FALSE,,TRUE,FALSE,4.29,28,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Sage 2002b,2002
bownii_Sharwood_2016a,Digitaria,bownii,,FALSE,,TRUE,FALSE,5.1,,,18,,,,,,,,,25,8,nf,1B,canon,C4 plants,Plants,No methods; just cite 2008 paper,Sharwood 2016a,2016
ibicensis_Galmés_2005,Diplotaxis,ibicensis,,FALSE,,TRUE,FALSE,,,,,,,,,,95.6,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
lepidotum_sakata_2024,Distylium,lepidotum,,FALSE,,TRUE,FALSE,,,,,,,,,,105.3,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
viscosa_sakata_2024,Dodonaea,viscosa,,FALSE,,TRUE,FALSE,,,,,,,,,,83.9,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
capensis_Galmés_2014b,Drosera,capensis,,FALSE,,TRUE,FALSE,4.7,,,10.3,,,327,,,,,,25,8,6.12,1B,canon,Carnivorous plants,Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
venusta_Galmés_2014b,Drosera,venusta,,FALSE,,TRUE,FALSE,3.3,,,11.8,,,348,,,,,,25,8,6.12,1B,canon,Carnivorous plants,Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
integerrima_sakata_2024,Drypetes,integerrima,,FALSE,,TRUE,FALSE,,,,,,,,,,108.8,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
elegans_Galmés_2014b,Echeveria,elegans,,FALSE,,TRUE,FALSE,4.5,,,10.5,,,236,,,,,,25,8,6.12,1B,canon,CAM plants,Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
crus-galli_Jordan_1983,Echinochloa,crus-galli,,FALSE,,TRUE,FALSE,,,,18.4,,,,,,83,,,25,8.3,6.23,1B,canon,C4 plants,Plants,Table 1,Jordan 1983,1983
crus-galli_Kent_and_Tomany_1995,Echinochloa,crus-galli,,FALSE,,TRUE,FALSE,,,,,,,,,,84.8,25,7.9,,,6.12,1B,canon,C4 plants,Plants,,Kent and Tomany 1995,1995
crus-pavonis_Kent_and_Tomany_1995,Echinochloa,crus-pavonis,,FALSE,,TRUE,FALSE,,,,,,,,,,82.7,25,7.9,,,6.12,1B,canon,C4 plants,Plants,,Kent and Tomany 1995,1995
crus-galli_Seemann_1984,Echinochloa,crus-galli,,FALSE,,TRUE,FALSE,7.11,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
turneriana_Sharwood_2016a,Echinochloa,turneriana,,FALSE,,TRUE,FALSE,5.5,,,19.9,,,,,,,,,25,8,nf,1B,canon,C4 plants,Plants,No methods; just cite 2008 paper,Sharwood 2016a,2016
crus-galli_Yeoh_1980,Echinochloa,crus-galli,,FALSE,,TRUE,FALSE,,,,57,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
mobilis_davidi_2020,Ectothiorhodospira,mobilis,,FALSE,,TRUE,E. coli,8.9,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_090484260.1,Davidi 2020,2020
mobilis_de_pins_2025,Ectothiorhodospira,mobilis,,FALSE,,FALSE,E. coli,22.3567146085487,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_090484260.1,de Pins 2025,2025
densa_Yeoh_1981,Egeria,densa,,FALSE,,TRUE,FALSE,,,,30,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
rotundata_sakata_2024,Elaeagnus,rotundata,,FALSE,,TRUE,FALSE,,,,,,,,,,92,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
photiniifolius_sakata_2024,Elaeocarpus,photiniifolius,,FALSE,,TRUE,FALSE,,,,,,,,,,82.7,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
indica_Ishikawa_2009,Eleusine,indica,,FALSE,,TRUE,FALSE,2.73,,,,,,,,,,,,28,8.2,na,1B,canon,C4 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
coracana_Seemann_1984,Eleusine,coracana,,FALSE,,TRUE,FALSE,4.70,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
coracana_Yeoh_1980,Eleusine,coracana,,FALSE,,TRUE,FALSE,,,,41,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
furfuraceus_hermida-carrera_2020,Elleanthus,furfuraceus,,FALSE,,TRUE,FALSE,2.8,,,12.4,,,,,,,,,25,8,6.23,1B,canon,C3 plants,Plants,,Hermida-Carrera 2020,2020
elongata_capó-bauçà_2022b,Ellisolandia,elongata,,FALSE,,TRUE,FALSE,3.4,,,36.2,,,1875,,,137.4,,,25,8.1,6.12,1D,canon,Macroalgae,Algae,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022b,2022
elodea_sp_Kent_and_Tomany_1995,Elodea,sp,,FALSE,,TRUE,FALSE,,,,,,,,,,111,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
canadensis_Yeoh_1981,Elodea,canadensis,,FALSE,,TRUE,FALSE,,,,39,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
hispidus_Kent_and_Tomany_1995,Elymus,hispidus,,FALSE,,TRUE,FALSE,,,,,,,,,,99,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
farctus_Orr_2016,Elymus,farctus,,FALSE,,TRUE,FALSE,3.3,,,19.5,,,300,,,106,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
huxleyi_Boller_2011,Emiliana,huxleyi,,FALSE,,TRUE,FALSE,,,,72,25,7.5,,,,,,,,,6.08,1D,canon,Coccolithophores,Algae,"Vmax not included because they only knew how much Rubisco was in the extract, not how much was active; calculated pKa individually for each vial so I'm not sure a correction can be made.",Boller 2011,2011
persephonae_davidi_2020,Endoriftia,persephonae,,FALSE,,TRUE,E. coli,7.2,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; Riftia pachyptila endosymbiont; accession number WP_005960001.1,Davidi 2020,2020
persephonae1_de_pins_2025,Endoriftia,persephonae,,FALSE,,FALSE,E. coli,22.5696357000587,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Riftia pachyptila endosymbiont (called sulfur-oxidizing symbionts); accession number WP_005960001.1,de Pins 2025,2025
persephonae2_de_pins_2025,Endoriftia,persephonae,,FALSE,,TRUE,E. coli,12.1365022160693,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number AAC38280.1; Endosymbiont of Riftia pachyptila,de Pins 2025,2025
endosymbiont_Robinson_2003,Endoriftia,persephonae,,FALSE,,TRUE,FALSE,0.573,,,239,,,,,,8.6,,8,30,7.6,nf,2,,Gammaproteobacteria,Bacteria,"Cite Horken & Tabita 1999 for Kc & kcat, Harpel 1993 for Sc/o",Robinson 2003,2003
persephonae_zhang_2021,Endoriftia,persephonae,,FALSE,,TRUE,E. coli,16.4,,,172.4,,,,,,,,,25,nf,nf,2,,Gammaproteobacteria,Bacteria,Endosymbiont of Riftia pachyptila; couldn’t find pKa or pH information,Zhang 2021,2021
endosymbiont_snail_davidi_2020,Endosymbiont,sp,unidentified scaly snail isolate Monju,FALSE,,TRUE,E. coli,8.1,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; endosymbiont of unidentified scaly snail isolate Monju; accession number WP_043107373.1,Davidi 2020,2020
endosymbiont_1_davidi_2020,Endosymbiont,sp,gill,FALSE,,TRUE,E. coli,3.3,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; gill endosymbiont; accession number WP_066044871.1,Davidi 2020,2020
endosymbiont_2_davidi_2020,Endosymbiont,sp,gill,FALSE,,TRUE,E. coli,2.6,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; gill endosymbiont; accession number WP_078483596.1,Davidi 2020,2020
endosymbiont_1_de_pins_2025,Endosymbiont,sp,unidentified scaly snail isolate Monju,FALSE,,FALSE,E. coli,17.459529503819,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Endosymbiont of unidentified scaly snail isolate Monju; accession number WP_043107373.1,de Pins 2025,2025
endosymbiont_2_de_pins_2025,Endosymbiont,sp,gill,FALSE,,FALSE,E. coli,7.45223820284958,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Gill endosymbiont; accession number WP_066044871.1,de Pins 2025,2025
endosymbiont_Schwedock_2004,Endosymbiont,sp,,FALSE,,TRUE,E. coli,3.4,,,40.3,,,,,,,,,23,8,6.08,1Ac,,Gammaproteobacteria,Bacteria,Solemya velum gill endosymbiont,Schwedock 2004,2004
stricta_Yeoh_1980,Entolasia,stricta,,FALSE,,TRUE,FALSE,,,,18,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
variegatum_ito_2024,Equisetum,variegatum,,FALSE,,TRUE,FALSE,1.85,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Ito 2024,2024
arvense_ito_2024,Equisetum,arvense,,FALSE,,TRUE,FALSE,1.86,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Ito 2024,2024
hyemale_ito_2024,Equisetum,hyemale,,FALSE,,TRUE,FALSE,2.34,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Ito 2024,2024
praealtum_ito_2024,Equisetum,praealtum,,FALSE,,TRUE,FALSE,2.44,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Ito 2024,2024
equisetum_sp_Kent_and_Tomany_1995,Equisetum,sp,,FALSE,,TRUE,FALSE,,,,,,,,,,89.9,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
superba_Ghannoum_2005,Eragrostis,superba,,FALSE,,TRUE,FALSE,4.9,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
tef_Orr_2016,Eragrostis,tef,,FALSE,,TRUE,FALSE,7.1,,,34.9,,,640,,,89,,8.2,25,8,6.11,1B,canon,C4 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
chloromelas_Yeoh_1980,Eragrostis,chloromelas,,FALSE,,TRUE,FALSE,,,,46,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
meyeriana_Seemann_1984,Eriochloa,meyeriana,,FALSE,,TRUE,FALSE,5.27,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
flabelliformis_Orr_2016,Erythrina,flabelliformis,,FALSE,,TRUE,FALSE,3.6,,,18.4,,,665,,,96.4,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
schultzii_3550_Castrillo_1995,Espeletia,schultzii,,FALSE,,TRUE,FALSE,,,,21.7,25,8.2,,,,,,,,,6.35,1B,canon,C3 plants,Plants,at 3550 m elevation,Castrillo 1995,1995
schultzii_4200_Castrillo_1995,Espeletia,schultzii,,FALSE,,TRUE,FALSE,,,,23.2,25,8.2,,,,,,,,,6.35,1B,canon,C3 plants,Plants,at 4200 m elevation,Castrillo 1995,1995
schultzii_3100_Castrillo_1995,Espeletia,schultzii,,FALSE,,TRUE,FALSE,,,,25,25,8.2,,,,,,,,,6.35,1B,canon,C3 plants,Plants,"extracted from leaves collected at 3,100m elevation. values at other temps here. Reference on this family claims they are predominantly C3 (Tropical Alpine Plant Ecology, Smith & Young 1987).",Castrillo 1995,1995
moorei_Galmés_2014b,Eucalyptus,moorei,,FALSE,,TRUE,FALSE,3.2,,,10,,,285,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from low stress environments; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
neglecta_Galmés_2014b,Eucalyptus,neglecta,,FALSE,,TRUE,FALSE,2.5,,,7.9,,,230,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from low stress environments; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
globulus_Sharwood_2017,Eucalyptus,globulus,,FALSE,,TRUE,FALSE,3,,,9.8,,,220,,,80.4,,,25,8.2,6.25,1B,canon,C3 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2017,2017
gracilis_Jordan_1981,Euglena,gracilis,,FALSE,,TRUE,FALSE,,,,25,,,410,,,54,,,25,8.3,6.23,1B,canon,Green algae,Algae,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
gracilis_Mcfadden_1975,Euglena,gracilis,,FALSE,,TRUE,FALSE,1.8336,30,8.0,,,,,,,,,,,,na,1B,canon,Green algae,Algae,,Mcfadden 1975,1975
natronophila_de_pins_2024,Euhalothece,natronophila,,FALSE,,TRUE,E. coli,5.6,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_146295313.1,de Pins 2024,2024
natronophila_de_pins_2025,Euhalothece,natronophila,,FALSE,,FALSE,E. coli,12.1365022160693,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_146295313.1,de Pins 2025,2025
helioscopia_Orr_2016,Euphorbia,helioscopia,,FALSE,,TRUE,FALSE,1.9,,,11.5,,,453,,,96.8,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
microsphaera_Orr_2016,Euphorbia,microsphaera,,FALSE,,TRUE,FALSE,4.5,,,25.8,,,546,,,99.7,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
ferriphaselus_davidi_2020,Ferriphaselus,sp,R-1,FALSE,,TRUE,E. coli,11.9,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Spectroscopic; accession number WP_035383183.1,Davidi 2020,2020
ferriphaselus_de_pins_2025,Ferriphaselus,sp,R-1,FALSE,,FALSE,E. coli,26.6151364387485,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number WP_035383183.1,de Pins 2025,2025
amnicola_de_pins_2025,Ferriphaselus,amnicola,,FALSE,,TRUE,E. coli,20.6533458764688,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number WP_062625813.1,de Pins 2025,2025
ovina_Ishikawa_2009,Festuca,ovina,,FALSE,,TRUE,FALSE,2.05,,,14.1,,,,,,,,,28,8.2,nf,1B,canon,C3 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
gigantea_Orr_2016,Festuca,gigantea,,FALSE,,TRUE,FALSE,5.1,,,31.2,,,595,,,108,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
pratensis_Orr_2016,Festuca,pratensis,,FALSE,,TRUE,FALSE,5.1,,,23.1,,,686,,,106,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
arundinacea_Yeoh_1980,Festuca,arundinacea,,FALSE,,TRUE,FALSE,,,,20,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
littoralis_Yeoh_1980,Festuca,littoralis,,FALSE,,TRUE,FALSE,,,,19,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
rigidulus_Yeoh_1981,Fissidens,rigidulus,,FALSE,,TRUE,FALSE,,,,40,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
pringlei_Hudson_1990,Flaveria,pringlei,,FALSE,,TRUE,FALSE,,,,10.5,30,8.0,,,,,,,,,6.17,1B,canon,C3 plants,Plants,,Hudson 1990,1990
trinervia_Hudson_1990,Flaveria,trinervia,,FALSE,,TRUE,FALSE,,,,18.5,30,8.0,,,,,,,,,6.17,1B,canon,C4 plants,Plants,,Hudson 1990,1990
angustifolia_Kubien_2008,Flaveria,angustifolia,,FALSE,,TRUE,FALSE,2.86,,,13.1,,,,,,83.2,,8.3,25,8.1,6.25,1B,canon,C3-C4 plants,Plants,,Kubien 2008,2008
anomala_Kubien_2008,Flaveria,anomala,,FALSE,,TRUE,FALSE,3.8,,,10.7,,,605,,,77.9,,8.3,25,8.1,6.25,1B,canon,C3-C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
australasica_Kubien_2008,Flaveria,australasica,,FALSE,,TRUE,FALSE,3.84,,,22,,,309,,,77.2,,8.3,25,8.1,6.25,1B,canon,C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
bidentis_Kubien_2008,Flaveria,bidentis,,FALSE,,TRUE,FALSE,4.16,,,20.2,,,639,,,75.5,,8.3,25,8.1,6.25,1B,canon,C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
brownii_Kubien_2008,Flaveria,brownii,,FALSE,,TRUE,FALSE,2.58,,,12.8,,,378,,,83.8,,8.3,25,8.1,6.25,1B,canon,C4 plants,Plants,Used Kane method for S so no pKa correction needed; C4-like,Kubien 2008,2008
chloraefolia_Kubien_2008,Flaveria,chloraefolia,,FALSE,,TRUE,FALSE,3.35,,,12.4,,,740,,,81.6,,8.3,25,8.1,6.25,1B,canon,C3-C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
cronquistii_Kubien_2008,Flaveria,cronquistii,,FALSE,,TRUE,FALSE,3.13,,,10.8,,,653,,,81,,8.3,25,8.1,6.25,1B,canon,C3 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
floridana_Kubien_2008,Flaveria,floridana,,FALSE,,TRUE,FALSE,3.19,,,13.2,,,686,,,84.5,,8.3,25,8.1,6.25,1B,canon,C3-C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
kochiana_Kubien_2008,Flaveria,kochiana,,FALSE,,TRUE,FALSE,3.68,,,22.7,,,150,,,77,,8.3,25,8.1,6.25,1B,canon,C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
linearis_Kubien_2008,Flaveria,linearis,,FALSE,,TRUE,FALSE,3.43,,,12.5,,,415,,,78.1,,8.3,25,8.1,6.25,1B,canon,C3-C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
palmeri_Kubien_2008,Flaveria,palmeri,,FALSE,,TRUE,FALSE,3.54,,,13.5,,,193,,,83.8,,8.3,25,8.1,6.25,1B,canon,C4 plants,Plants,Used Kane method for S so no pKa correction needed; C4-like,Kubien 2008,2008
pringlei_Kubien_2008,Flaveria,pringlei,,FALSE,,TRUE,FALSE,3.11,,,12,,,666,,,80.8,,8.3,25,8.1,6.25,1B,canon,C3 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
ramosissima_Kubien_2008,Flaveria,ramosissima,,FALSE,,TRUE,FALSE,2.77,,,12,,,722,,,79.8,,8.3,25,8.1,6.25,1B,canon,C3-C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
sonorensis_Kubien_2008,Flaveria,sonorensis,,FALSE,,TRUE,FALSE,2.69,,,10.2,,,785,,,84.3,,8.3,25,8.1,6.25,1B,canon,C3-C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
trinervia_Kubien_2008,Flaveria,trinervia,,FALSE,,TRUE,FALSE,4.42,,,17.9,,,671,,,77,,8.3,25,8.1,6.25,1B,canon,C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
vaginata_Kubien_2008,Flaveria,vaginata,,FALSE,,TRUE,FALSE,3.78,,,21.4,,,880,,,78.7,,8.3,25,8.1,6.25,1B,canon,C4 plants,Plants,Used Kane method for S so no pKa correction needed; C4-like,Kubien 2008,2008
angustifolia_Perdomo_2015,Flaveria,angustifolia,,FALSE,,TRUE,FALSE,2.77,,,12.5,,,,,,90.4,,8.3,25,8,6.23,1B,canon,C3-C4 plants,Plants,Sc/o used Kane method so no pKa correction necessary,Perdomo 2015,2015
bidentis_Perdomo_2015,Flaveria,bidentis,,FALSE,,TRUE,FALSE,3.42,,,19.5,,,,,,80,,8.3,25,8,6.23,1B,canon,C4 plants,Plants,Sc/o used Kane method so no pKa correction necessary,Perdomo 2015,2015
cronquistii_Perdomo_2015,Flaveria,cronquistii,,FALSE,,TRUE,FALSE,2.95,,,9.7,,,,,,88.2,,8.3,25,8,6.23,1B,canon,C3 plants,Plants,Sc/o used Kane method so no pKa correction necessary,Perdomo 2015,2015
floridana_Perdomo_2015,Flaveria,floridana,,FALSE,,TRUE,FALSE,2.86,,,11.9,,,,,,84.3,,8.3,25,8,6.23,1B,canon,C3-C4 plants,Plants,Sc/o used Kane method so no pKa correction necessary,Perdomo 2015,2015
pringlei_Perdomo_2015,Flaveria,pringlei,,FALSE,,TRUE,FALSE,2.48,,,11.4,,,,,,90.1,,8.3,25,8,6.23,1B,canon,C3 plants,Plants,Sc/o used Kane method so no pKa correction necessary,Perdomo 2015,2015
trinervia_Perdomo_2015,Flaveria,trinervia,,FALSE,,TRUE,FALSE,3.28,,,18.4,,,,,,78.3,,8.3,25,8,6.23,1B,canon,C4 plants,Plants,Sc/o used Kane method so no pKa correction necessary,Perdomo 2015,2015
pringlei_Sage_2002b,Flaveria,pringlei,,FALSE,,TRUE,FALSE,2.96,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sage 2002b,2002
trinervia_Sage_2002b,Flaveria,trinervia,,FALSE,,TRUE,FALSE,4.08,28,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Sage 2002b,2002
bidentis_Whitney_2011b,Flaveria,bidentis,,FALSE,,TRUE,FALSE,4.8,,,20.4,,,420,,,81,,,25,7.8,6.25,1B,canon,C4 plants,Plants,,Whitney 2011,2011
floridana_Whitney_2011b,Flaveria,floridana,,FALSE,,TRUE,FALSE,3.6,,,14.4,,,374,,,82,,,25,7.8,6.25,1B,canon,C3-C4 plants,Plants,,Whitney 2011,2011
pringlei_Whitney_2011b,Flaveria,pringlei,,FALSE,,TRUE,FALSE,3.5,,,13.7,,,376,,,81,,,25,7.8,6.25,1B,canon,C3 plants,Plants,,Whitney 2011,2011
pringlei_Zhu_1998,Flaveria,pringlei,,FALSE,,TRUE,FALSE,2.1,,,12,,,880,,,102,,,25,8,6.23,1B,canon,C3 plants,Plants,"Very light on details, pH could be wrong for kcat",Zhu 1998,1998
suffruticosa_Orr_2016,Flueggea,suffruticosa,,FALSE,,TRUE,FALSE,3.4,,,19.2,,,547,,,101,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
vulgare_Orr_2016,Foeniculum,vulgare,,FALSE,,TRUE,FALSE,4.4,,,20.7,,,512,,,94.3,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
vesca_Yeoh_1981,Fragaria,vesca,,FALSE,,TRUE,FALSE,,,,18,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
cylindrus_Young_2016,Fragilariopsis,cylindrus,CCMP1102,FALSE,,TRUE,FALSE,3.5,,,64,,,667,,,77,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
funaria_sp_Yeoh_1981,Funaria,sp,,FALSE,,TRUE,FALSE,,,,23,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
sulphuraria_Pearce_2006,Galdieria,sulphuraria,,FALSE,,TRUE,FALSE,1.2,25,8.0,,,,,,,,,,,,na,1D,canon,Red algae,Algae,,Pearce 2006,2006
partita_Uemura_1997,Galdieria,partita,Tokara,FALSE,,TRUE,FALSE,1.6,,,6.6,,,,,,238,,,25,8,6.08,1D,canon,Red algae,Algae,,Uemura 1997,1997
sulphuraria_Whitney_2001,Galdieria,sulphuraria,,FALSE,,TRUE,FALSE,1.2,,8.0,3.3,,,374,,,166,,,25,8.3,6.25,1D,canon,Red algae,Algae,pKa not needed for Sc/o; assumed 6.25 for pKa as Whitney papers have been using that value since 1999,Whitney 2001,2001
capsiferriformans_de_pins_2025,Gallionella,capsiferriformans,,FALSE,,TRUE,E. coli,21.7179513340187,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number WP_013292022.1,de Pins 2025,2025
acididurans_de_pins_2025,Gallionella,acididurans,,FALSE,,FALSE,E. coli,2.34213200660986,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number KXS32221.1,de Pins 2025,2025
gallionella_liu_2022,Gallionella,sp,,FALSE,,TRUE,E. coli,15.7,,,172,,,92,,,22,,8.2,25,8,6.11,2,,Betaproteobacteria,Bacteria,Uses Parry method for Sc/o,Liu 2022,2022
gallionella_R98A_liu_2022,Gallionella,sp,,TRUE,R98A,TRUE,E. coli,11.1,,,170,,,155,,,25.7,,8.2,25,8,6.11,2,,Betaproteobacteria,Bacteria,Uses Parry method for Sc/o,Liu 2022,2022
gallionella_R131A_liu_2022,Gallionella,sp,,TRUE,R131A,TRUE,E. coli,12.3,,,198,,,198,,,24.9,,8.2,25,8,6.11,2,,Betaproteobacteria,Bacteria,Uses Parry method for Sc/o,Liu 2022,2022
geminocystis_de_pins_2024,Geminocystis,sp,M7585_C2015_104,FALSE,,TRUE,E. coli,1.9,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number HIK38644.1,de Pins 2024,2024
geminocystis_de_pins_2025,Geminocystis,sp,M7585_C2015_104,FALSE,,FALSE,E. coli,4.04550073868977,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number HIK38644.1,de Pins 2025,2025
bivora_davidi_2020,Ghiorsea,bivora,,FALSE,,TRUE,E. coli,4.8,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Bacteria,Spectroscopic; accession number WP_038250565.1,Davidi 2020,2020
bivora_de_pins_2025,Ghiorsea,bivora,,FALSE,,FALSE,E. coli,10.8589756670093,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Bacteria,Accession number WP_038250565.1,de Pins 2025,2025
biloba_Yeoh_1981,Ginkgo,biloba,,FALSE,,TRUE,FALSE,,,,23,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
coronaria_Delgado_1993,Glebionis,coronaria,,FALSE,,TRUE,FALSE,,,,,,,,,,106.6,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Delgado 1993,1995
gloeocapsa_de_pins_2024,Gloeocapsa,sp,PCC 73106,FALSE,,TRUE,E. coli,8.6,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_006527632.1,de Pins 2024,2024
gloeocapsa_de_pins_2025,Gloeocapsa,sp,PCC 73106,FALSE,,FALSE,E. coli,18.5241349613689,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_006527632.1,de Pins 2025,2025
peniocystis_Jordan_1981,Gloeocapsa,peniocystis,,FALSE,,TRUE,FALSE,,,,121,,,1220,,,47,,,25,8.3,6.23,1Ac,canon,Cyanobacteria,Bacteria,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
declinata_Yeoh_1980,Glyceria,declinata,,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
max_Hermida-Carrera_2016,Glycine,max,Ransom,FALSE,,TRUE,FALSE,1.5,,8.0,8.6,,8.0,292,,,97,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
max_Iñiguez_2021,Glycine,max,,FALSE,,FALSE,FALSE,1.5,,,10.8,,,496,,,,,,25,na,na,1B,canon,C3 plants,Plants,methodology-corrected average from Iñiguez et al. 2021 across multiple cultivars,Iñiguez 2021,2021
max_Jordan_1981,Glycine,max,,FALSE,,TRUE,FALSE,,,,9,,,430,,,82,,,25,8.3,6.23,1B,canon,C3 plants,Plants,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
max_Laing_1974,Glycine,max,Wayne,FALSE,,TRUE,FALSE,,,,25,,,390,,,,,,25,8.5,nf,1B,canon,C3 plants,Plants,From table III. ,Laing 1974,1974
max_Makino_1985,Glycine,max,,FALSE,,TRUE,FALSE,,,,6.8,25,8.0,,,,,,,,,6.11,1B,canon,C3 plants,Plants,kcat reported as specific activity,Makino 1985,1985
glycine_canescens_Orr_2016,Glycine,canescens,,FALSE,,TRUE,FALSE,2.6,,,17.2,,,587,,,97.1,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
max_Orr_2016,Glycine,max,,FALSE,,TRUE,FALSE,2.5,,,13.2,,,660,,,99.6,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
max_Seemann_1984,Glycine,max,,FALSE,,TRUE,FALSE,3.09,30,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
globosa_Yeoh_1981,Gomphrena,globosa,,FALSE,,TRUE,FALSE,,,,31,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1981,1981
hirsutum_Sage_2002b,Gossypium,hirsutum,,FALSE,,TRUE,FALSE,2.84,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sage 2002b,2002
hirsutum_Seemann_1984,Gossypium,hirsutum,,FALSE,,TRUE,FALSE,2.75,30,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
hirsutum_Yeoh_1981,Gossypium,hirsutum,,FALSE,,TRUE,FALSE,,,,19,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
pacifica_Newman_1989,Griffithsia,pacifica,,FALSE,,TRUE,FALSE,,,,41,23,8.0,,,,,,,,,6.39,1D,canon,Red algae,Algae,methods in Newman & Cattolico 1987,Newman 1989,1989
monilis_Whitney_2001,Griffithsia,monilis,,FALSE,,TRUE,FALSE,2.6,,8.0,9.3,,,,,,167,,,25,8.3,6.25,1D,canon,Red algae,Algae,pKa not needed for Sc/o; assumed 6.25 for pKa as Whitney papers have been using that value since 1999,Whitney 2001,2001
guyparkeria_de_pins_2024,Guyparkeria,sp,,FALSE,,TRUE,E. coli,7.6,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_136865895.1,de Pins 2024,2024
guyparkeria_de_pins_2025,Guyparkeria,sp,,FALSE,,FALSE,E. coli,16.394924046269,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_136865895.1,de Pins 2025,2025
halochloris_de_pins_2024,Halorhodospira,halochloris,,FALSE,,TRUE,E. coli,2.7,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Bacteria,Accession number WP_096406537.1,de Pins 2024,2024
halochloris_de_pins_2025,Halorhodospira,halochloris,,FALSE,,FALSE,E. coli,5.96179056227966,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Bacteria,Accession number WP_096406537.1,de Pins 2025,2025
neapolitanus_de_pins_2024,Halothiobacillus,neapolitanus,,FALSE,,TRUE,E. coli,9.8,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_012823801.1,de Pins 2024,2024
neapolitanus_de_pins_2025,Halothiobacillus,neapolitanus,,FALSE,,FALSE,E. coli,21.2921091509988,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_012823801.1,de Pins 2025,2025
neapolitanus_Snead_and_Shively_1979,Halothiobacillus,neapolitanus,,FALSE,,TRUE,FALSE,3.063,,,850,,,,,,,,,25,8.0,nf,1Ac,,Gammaproteobacteria,Bacteria,Cite Shively 1973 for methods,Snead and Shively 1979,1979
annuus_Iñiguez_2021,Helianthus,annuus,,FALSE,,FALSE,FALSE,1.7,,,,,,,,,,,,25,na,na,1B,canon,C3 plants,Plants,methodology-corrected average from Iñiguez et al. 2021 across multiple cultivars,Iñiguez 2021,2021
grosseserratus_Jordan_1983,Helianthus,grosseserratus,maximus,FALSE,,TRUE,FALSE,,,,10,,,,,,77,,,25,8.3,6.23,1B,canon,C3 plants,Plants,Table 1,Jordan 1983,1983
annuus_Makino_1985,Helianthus,annuus,,FALSE,,TRUE,FALSE,2.864,,,9.4,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,kcat reported as specific activity,Makino 1985,1985
annuus_Sungro_Parry_1989,Helianthus,annuus,Sungro,FALSE,,TRUE,FALSE,,,,,,,,,,104,25,8.2,,,6.2,1B,canon,C3 plants,Plants,,Parry 1989,1989
annuus_SH_229_Parry_1989,Helianthus,annuus,SH 229,FALSE,,TRUE,FALSE,,,,,,,,,,105,25,8.2,,,6.2,1B,canon,C3 plants,Plants,,Parry 1989,1989
annuus_Sharwood_2008,Helianthus,annuus,,FALSE,,TRUE,FALSE,2.9,,,,,,,,,84.1,,,25,8,na,1B,canon,C3 plants,Plants,Sc/o used Kane method so no pKa correction necessary,Sharwood 2008,2008
lividus_Delgado_1993,Helleborus,lividus,corsicus,FALSE,,TRUE,FALSE,,,,,,,,,,107.5,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Delgado 1993,1995
foetidus_Galmés_2005,Helleborus,foetidus,,FALSE,,TRUE,FALSE,,,,,,,,,,88.7,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
glaber_sakata_2024,Hibiscus,glaber,,FALSE,,TRUE,FALSE,,,,,,,,,,78.7,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
tiliaceus_sakata_2024,Hibiscus,tiliaceus,,FALSE,,TRUE,FALSE,,,,,,,,,,86.4,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
grandifolius_Iñiguez_2019,Himantothallus,grandifolius,,FALSE,,TRUE,FALSE,2.08,,,18.1,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
balearica_Delgado_1993,Hippocrepis,balearica,,FALSE,,TRUE,FALSE,,,,,,,,,,94.4,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Delgado 1993,1995
hoeflea_davidi_2020,Hoeflea,sp,BRH_c9,FALSE,,TRUE,E. coli,4.1,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Spectroscopic; accession number KJS13813.1,Davidi 2020,2020
hoeflea_de_pins_2025,Hoeflea,sp,BRH_c9,FALSE,,FALSE,E. coli,9.36852802643947,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Accession number KJS13813.1,de Pins 2025,2025
lanatus_Kent_and_Tomany_1995,Holcus,lanatus,,FALSE,,TRUE,FALSE,,,,,,,,,,109.9,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
lanatus_Yeoh_1980,Holcus,lanatus,,FALSE,,TRUE,FALSE,,,,24,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
vulgare_Hermida-Carrera_2016,Hordeum,vulgare,vulgare,FALSE,,TRUE,FALSE,2.4,,8.0,9,,8.0,394,,,99.2,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
vulgare_ito_2024,Hordeum,vulgare,,FALSE,,TRUE,FALSE,1.55,25,8,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Ito 2024,2024
vulgare_Kane_1994,Hordeum,vulgare,Stirling,FALSE,,TRUE,FALSE,,,,,,,,,,86.8,25,8.3,,,na,1B,canon,C3 plants,Plants,CO2/O2 gas mix added in presence of bovine CA; no pKa needed,Kane 1994,1994
bulbosum_Kent_and_Tomany_1995,Hordeum,bulbosum,,FALSE,,TRUE,FALSE,,,,,,,,,,101.2,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
marinum_Kent_and_Tomany_1995,Hordeum,marinum,,FALSE,,TRUE,FALSE,,,,,,,,,,100.1,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
brachyantherum_Orr_2016,Hordeum,brachyantherum,,FALSE,,TRUE,FALSE,2.9,,,16.2,,,371,,,101,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
murinum_Orr_2016,Hordeum,murinum,,FALSE,,TRUE,FALSE,4.2,,,21.5,,,511,,,100,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
vulgare_Prins_2016,Hordeum,vulgare,Lenins,FALSE,,TRUE,FALSE,3.99,,,15.2,,,465,,,102,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
hordeum_vulgare_Yeoh_1980,Hordeum,vulgare,,FALSE,,TRUE,FALSE,,,,15,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
kuenenii_1Ac_de_pins_2024,Hydrogenovibrio,kuenenii,,FALSE,,TRUE,E. coli,8.3,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_024850198.1,de Pins 2024,2024
kuenenii_1Aq_de_pins_2024,Hydrogenovibrio,kuenenii,,FALSE,,TRUE,E. coli,4.1,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Bacteria,Accession number WP_024851896.1,de Pins 2024,2024
kuenenii_2_de_pins_2025,Hydrogenovibrio,kuenenii,,FALSE,,TRUE,E. coli,24.6988466151586,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_024851801.1,de Pins 2025,2025
h_marinus_de_pins_2025,Hydrogenovibrio,marinus,,FALSE,,FALSE,E. coli,24.4859255236486,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_029912625.1,de Pins 2025,2025
hydrogenovibrio_sc-1_de_pins_2025,Hydrogenovibrio,sp,SC-1,FALSE,,TRUE,E. coli,22.9954778830787,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_101841124.1,de Pins 2025,2025
hydrogenovibrio_de_pins_2025,Hydrogenovibrio,sp,,FALSE,,TRUE,E. coli,22.5696357000587,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_029939712.1; also matches a Thiomicrospira sequence,de Pins 2025,2025
hydrogenovibrio_milos-t1_de_pins_2025,Hydrogenovibrio,sp,Milos-T1,FALSE,,TRUE,E. coli,19.5887404189189,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_038137960.1; record suppressed because genome assembly is no longer available but closest BLAST hit is still to Hydrogenovibrio,de Pins 2025,2025
kuenenii_1Ac_de_pins_2025,Hydrogenovibrio,kuenenii,,FALSE,,FALSE,E. coli,18.0982927783489,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_024850198.1,de Pins 2025,2025
kuenenii_1Aq_de_pins_2025,Hydrogenovibrio,kuenenii,,FALSE,,FALSE,E. coli,8.9426858434195,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Bacteria,Accession number WP_024851896.1,de Pins 2025,2025
marinus_Iac_Hayashi_1998,Hydrogenovibrio,marinus,MH-110,FALSE,,TRUE,FALSE,2.9796,,7.5,,,,,,,33.1,,8,30,,6.1,1Ac,canon,Gammaproteobacteria,Bacteria,Assuming they used the correct equation for pKa not the wrong one in Yaguchi,Hayashi 1998,1998
marinus_Iaq_Hayashi_1998,Hydrogenovibrio,marinus,MH-110,FALSE,,TRUE,FALSE,1.3752,,7.5,,,,,,,26.6,,8,30,,6.1,1Aq,canon,Gammaproteobacteria,Bacteria,Assuming they used the correct equation for pKa not the wrong one in Yaguchi,Hayashi 1998,1998
marinus_tsai_2025,Hydrogenovibrio,marinus,,FALSE,,TRUE,E. coli,25.1,,,196,,,,,,20.7,,8.3,25,8,6.25,2,,Gammaproteobacteria,Bacteria,2 pKa model used; accession number WP_029912625.1,Tsai 2025,2025
marinus_davidi_2020_corrected,Hydrogenovibrio,marinus,,FALSE,,TRUE,E. coli,24,,,162,,,,,,148,,8.3,25,8,6.25,2,,Gammaproteobacteria,Bacteria,Corrected values from Davidi 2020; 2 pKa model used; accession number WP_029912625.1,Tsai 2025,2025
polysperma_Yeoh_1981,Hygrophila,polysperma,,FALSE,,TRUE,FALSE,,,,36,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
balearicum_Galmés_2005,Hypericum,balearicum,,FALSE,,TRUE,FALSE,,,,,,,,,,93.6,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
mertensii_sakata_2024,Ilex,mertensii,,FALSE,,TRUE,FALSE,,,,,,,,,,123.8,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
aquifolium_Yeoh_1981,Ilex,aquifolium,,FALSE,,TRUE,FALSE,,,,25,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
i_purpurea_davidi_2020,Imhoffiella,purpurea,,FALSE,,TRUE,E. coli,8.9,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_043749806.1,Davidi 2020,2020
purpurea_de_pins_2024,Imhoffiella,purpurea,,FALSE,,TRUE,E. coli,4.4,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Bacteria,Accession number WP_043756787.1,de Pins 2024,2024
i_purpurea_2_de_pins_2025,Imhoffiella,purpurea,,FALSE,,FALSE,E. coli,18.7370560528789,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_043749806.1,de Pins 2025,2025
i_purpurea_1Aq_de_pins_2025,Imhoffiella,purpurea,,FALSE,,FALSE,E. coli,9.58144911794946,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Bacteria,Accession number WP_043756787.1,de Pins 2025,2025
cylindrica_Yeoh_1980,Imperata,cylindrica,,FALSE,,TRUE,FALSE,,,,62,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
peregrinum_davidi_2020,Insolitispirillum,peregrinum,,FALSE,,TRUE,E. coli,4.7,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_076400097.1,Davidi 2020,2020
peregrinum_de_pins_2025,Insolitispirillum,peregrinum,,FALSE,,FALSE,E. coli,10.4331334839894,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_076400097.1,de Pins 2025,2025
batatas_Hermida-Carrera_2016,Ipomoea,batatas,Rosa de Malaga,FALSE,,TRUE,FALSE,2.5,,8.0,12,,8.0,340,,,98.5,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
douglasiana_Galmés_2014b,Iris,douglasiana,,FALSE,,TRUE,FALSE,3.5,,,9.7,,,413,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from low stress environments; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
globosa_Yeoh_1980,Isachne,globosa,,FALSE,,TRUE,FALSE,,,,13,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
jacksonvillea_de_pins_2024,Jacksonvillea,sp,ISTCYN1,FALSE,,TRUE,E. coli,6.1,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,"Accession number WP_162548693.1; record has been suppressed for contamination, but BLAST hits for sequence still place it in the cyanobacteria",de Pins 2024,2024
jacksonvillea_de_pins_2025,Jacksonvillea,sp,ISTCYN1,FALSE,,FALSE,E. coli,13.2011076736192,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,"Accession number WP_162548693.1; record has been suppressed for contamination, but BLAST hits for sequence still place it in the cyanobacteria",de Pins 2025,2025
daigremontiana_Badger_1974,Kalanchoë,daigremontiana,,FALSE,,TRUE,FALSE,,,,18,,,310,,,,,,25,8.3,6.37,1B,canon,CAM plants,Plants,pH from Badger & Andrews 1974,Badger 1974,1974
daigremontiana_Griffiths_2008,Kalanchoë,daigremontiana,,FALSE,,TRUE,FALSE,,,,10.8,,8.2,,,,88.9,,8.3,25,,6.37,1B,canon,CAM plants,Plants,S doesn't need pKa (used gas method),Griffiths 2008,2008
pinnata_Griffiths_2008,Kalanchoë,pinnata,,FALSE,,TRUE,FALSE,,,,10.7,,8.2,,,,88.4,,8.3,25,,6.37,1B,canon,CAM plants,Plants,S doesn't need pKa (used gas method),Griffiths 2008,2008
daigremontiana_Yeoh_1981,Kalanchoë,daigremontiana,,FALSE,,TRUE,FALSE,,,,15,25,8.0,,,,,,,,,6.37,1B,canon,CAM plants,Plants,,Yeoh 1981,1981
pinnata_Yeoh_1981,Kalanchoë,pinnata,,FALSE,,TRUE,FALSE,,,,16,25,8.0,,,,,,,,,6.37,1B,canon,CAM plants,Plants,,Yeoh 1981,1981
subtile_goudet_2020,Klebsormidium,subtile,,FALSE,,TRUE,FALSE,3.79,,,18.7,,,,,,,,,25,8.2,6.11,1B,canon,Green algae,Algae,,Goudet 2020,2020
sicula_Galmés_2005,Kundmannia,sicula,,FALSE,,TRUE,FALSE,,,,,,,,,,89.2,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
purpureus_Orr_2016,Lablab,purpureus,,FALSE,,TRUE,FALSE,5.3,,,21.7,,,556,,,91.1,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
lactuca_sativa_Hermida-Carrera_2016,Lactuca,sativa,Cogollo de Tudela,FALSE,,TRUE,FALSE,2.2,,8.0,11.1,,8.0,403,,,94,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
sativa_Yeoh_1981,Lactuca,sativa,,FALSE,,TRUE,FALSE,,,,22,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
ovatus_Yeoh_1980,Lagurus,ovatus,,FALSE,,TRUE,FALSE,,,,22,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
digitata_Iñiguez_2019,Laminaria,digitata,,FALSE,,TRUE,FALSE,1.42,,,17,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
solidungula_Iñiguez_2019,Laminaria,solidungula,,FALSE,,TRUE,FALSE,1.6,,,18.5,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
L_purpurea_davidi_2020,Lamprocystis,purpurea,,FALSE,,TRUE,E. coli,7.1,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_020503383.1,Davidi 2020,2020
l_purpurea_de_pins_2025,Lamprocystis,purpurea,,FALSE,,FALSE,E. coli,15.3303185887191,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_020503383.1,de Pins 2025,2025
hexandra_Kent_and_Tomany_1995,Leersia,hexandra,,FALSE,,TRUE,FALSE,,,,,,,,,,110.6,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
campestre_Orr_2016,Lepidium,campestre,,FALSE,,TRUE,FALSE,3.4,,,15.8,,,336,,,92.8,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
leptolyngbya_de_pins_2024,Leptolyngbya,sp,PCC 7376,FALSE,,TRUE,E. coli,6.6,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_015132410.1,de Pins 2024,2024
leptolyngbya_de_pins_2025,Leptolyngbya,sp,PCC 7376,FALSE,,FALSE,E. coli,14.2657131311692,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_015132410.1,de Pins 2025,2025
boryana_Jordan_1983,Leptolyngbya,boryana,,FALSE,,TRUE,FALSE,,,,100,,,,,,54,,,25,8.3,6.23,1Bc,canon,Cyanobacteria,Bacteria,"Table 1. unsure if A/B, probably B as Trichodesmium is closely related to Plectonema",Jordan 1983,1983
boryana_Kent_and_Tomany_1984,Leptolyngbya,boryana,,FALSE,,TRUE,FALSE,,,,,,,,,,32,25,7.9,,,nf,1Bc,canon,Cyanobacteria,Bacteria,,Kent and Tomany 1984,1984
illini_davidi_2020,Leptonema,illini,,FALSE,,TRUE,E. coli,7.4,30,8,,,,,,,,,,,,na,2,,Leptospiria,Bacteria,Spectroscopic; accession number WP_002774391.1,Davidi 2020,2020
illini_de_pins_2025,Leptonema,illini,,FALSE,,FALSE,E. coli,18.0982927783489,30,8,,,,,,,,,,,,na,2,,Leptospiria,Bacteria,Accession number WP_002774391.1,de Pins 2025,2025
kymatousa_de_pins_2024,Leptothoe,kymatousa,,FALSE,,TRUE,E. coli,10.1,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_215616936.1,de Pins 2024,2024
kymatousa_de_pins_2025,Leptothoe,kymatousa,,FALSE,,FALSE,E. coli,21.7179513340187,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_215616936.1,de Pins 2025,2025
ochracea_davidi_2020,Leptothrix,ochracea,,FALSE,,TRUE,E. coli,5.7,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Spectroscopic; accession number WP_009453497.1,Davidi 2020,2020
ochracea_de_pins_2025,Leptothrix,ochracea,,FALSE,,FALSE,E. coli,12.7752654905992,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number WP_009453497.1,de Pins 2025,2025
micranthum_sakata_2024,Ligustrum,micranthum,,FALSE,,TRUE,FALSE,,,,,,,,,,123,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
robusta_de_pins_2024,Limnoraphis,robusta,,FALSE,,TRUE,E. coli,7.5,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_046277111.1,de Pins 2024,2024
robusta_de_pins_2025,Limnoraphis,robusta,,FALSE,,FALSE,E. coli,16.394924046269,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_046277111.1,de Pins 2025,2025
gibertii_Galmés_2005,Limonium,gibertii,,FALSE,,TRUE,FALSE,,,,,,,,,,110,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
magallufianum_Galmés_2005,Limonium,magallufianum,,FALSE,,TRUE,FALSE,,,,,,,,,,106,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
virgatum_Galmés_2005,Limonium,virgatum,,FALSE,,TRUE,FALSE,,,,,,,,,,100.7,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
antonii-llorensii_Galmés_2014a,Limonium,antonii-llorensii,,FALSE,,TRUE,FALSE,2.4,,,8.7,,,397,,,112,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
artruchium_Galmés_2014a,Limonium,artruchium,,FALSE,,TRUE,FALSE,3,,,9.4,,,321,,,113,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
balearicum_Galmés_2014a,Limonium,balearicum,,FALSE,,TRUE,FALSE,3.6,,,9.7,,,346,,,103,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
barceloi_Galmés_2014a,Limonium,barceloi,,FALSE,,TRUE,FALSE,3.4,,,9.3,,,346,,,106,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
biflorum_Galmés_2014a,Limonium,biflorum,,FALSE,,TRUE,FALSE,2.4,,,8,,,316,,,112,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
companyonis_Galmés_2014a,Limonium,companyonis,,FALSE,,TRUE,FALSE,3.3,,,8.9,,,429,,,112,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
echioides_Galmés_2014a,Limonium,echioides,,FALSE,,TRUE,FALSE,3.9,,,10.7,,,427,,,106,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
ejulabilis_Galmés_2014a,Limonium,ejulabilis,,FALSE,,TRUE,FALSE,2,,,7.6,,,415,,,116,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
gibertii_Galmés_2014a,Limonium,gibertii,,FALSE,,TRUE,FALSE,2.5,,,9.1,,,431,,,112,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
grosii_Galmés_2014a,Limonium,grosii,,FALSE,,TRUE,FALSE,2.9,,,8.1,,,328,,,113,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
gymnesicum_Galmés_2014a,Limonium,gymnesicum,,FALSE,,TRUE,FALSE,2.4,,,8.2,,,388,,,121,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
leonardi-llorensii_Galmés_2014a,Limonium,leonardi-llorensii,,FALSE,,TRUE,FALSE,2.8,,,8.8,,,438,,,110,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
magallufianum_Galmés_2014a,Limonium,magallufianum,,FALSE,,TRUE,FALSE,2.6,,,7,,,297,,,111,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
retusum_Galmés_2014a,Limonium,retusum,,FALSE,,TRUE,FALSE,2.1,,,7.1,,,396,,,121,,,25,8,6.12,1B,canon,C3 plants,Plants,"Cites Parry 2007 for S measurement, no pKa reported -> pKa from other Galmes 2014 paper",Galmés 2014a,2014
latebracteatum_Galmés_2014b,Limonium,latebracteatum,,FALSE,,TRUE,FALSE,2.7,,,8.8,,,344,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from environments with high osmotic and heat stress; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
stenophyllum_Galmés_2014b,Limonium,stenophyllum,,FALSE,,TRUE,FALSE,2.6,,,8.4,,,457,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from environments with high osmotic and heat stress; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
virgatum_Galmés_2014b,Limonium,virgatum,,FALSE,,TRUE,FALSE,2.4,,,8.5,,,381,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from environments with high osmotic and heat stress; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
gibertii_Parry_2007,Limonium,gibertii,,FALSE,,TRUE,FALSE,4.5,,,8.2,,,370,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,,Parry 2007,2007
amoena_hermida-carrera_2020,Lockhartia,amoena,,FALSE,,TRUE,FALSE,4.3,,,23.4,,,,,,,,,25,8,6.23,1B,canon,C3 plants,Plants,,Hermida-Carrera 2020,2020
perenne_Jordan_1981,Lolium,perenne,,FALSE,,TRUE,FALSE,,,,16,,,500,,,80,,,25,8.3,6.23,1B,canon,C3 plants,Plants,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
multiflorum_Orr_2016,Lolium,multiflorum,,FALSE,,TRUE,FALSE,4.5,,,29.1,,,740,,,99.9,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
rigidum_Orr_2016,Lolium,rigidum,,FALSE,,TRUE,FALSE,4.7,,,25,,,520,,,100,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
perenne_Yeoh_1980,Lolium,perenne,,FALSE,,TRUE,FALSE,,,,19,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
lonicera_sp_Kent_and_Tomany_1995,Lonicera,sp,,FALSE,,TRUE,FALSE,,,,,,,,,,112.4,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
cytisoides_Delgado_1993,Lotus,cytisoides,,FALSE,,TRUE,FALSE,,,,,,,,,,106.9,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Delgado 1993,1995
angustiflorius_Yeoh_1981,Lupinus,angustiflorius,,FALSE,,TRUE,FALSE,,,,22,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
serratum_sugawara_2025,Lycopodium,serratum,,FALSE,,TRUE,FALSE,1.17,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Sugawara 2025,2025
dendroideum_sugawara_2025,Lycopodium,dendroideum,,FALSE,,TRUE,FALSE,1.45,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Sugawara 2025,2025
minoricensis_Galmés_2005,Lysimachia,minoricensis,,FALSE,,TRUE,FALSE,,,,,,,,,,93.8,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
atropurpureum_Sage_1993,Macroptilium,atropurpureum,,FALSE,,TRUE,FALSE,2.675,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
uniflorum_Orr_2016,Macrotyloma,uniflorum,,FALSE,,TRUE,FALSE,4.4,,,25.2,,,519,,,101,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
communis_Yeoh_1981,Macrozamia,communis,,FALSE,,TRUE,FALSE,,,,14,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
magnetospira_davidi_2020,Magnetospira,sp,QH-2,FALSE,,TRUE,E. coli,0.8,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_046022207.1,Davidi 2020,2020
gryphiswaldense_davidi_2020,Magnetospirillum,gryphiswaldense,MSR-1,FALSE,,TRUE,E. coli,8,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number CAM77388.1,Davidi 2020,2020
moscoviense_davidi_2020,Magnetospirillum,moscoviense,,FALSE,,TRUE,E. coli,7.3,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_068501953.1,Davidi 2020,2020
magnetospirillum_davidi_2020,Magnetospirillum,sp,ME-1,FALSE,,TRUE,E. coli,5.6,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_085372695.1,Davidi 2020,2020
fulvum_davidi_2020,Magnetospirillum,fulvum,,FALSE,,TRUE,E. coli,0.5,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_021133537.1,Davidi 2020,2020
moscoviense_de_pins_2025,Magnetospirillum,moscoviense,,FALSE,,FALSE,E. coli,18.7370560528789,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_068501953.1,de Pins 2025,2025
gryphiswaldense_de_pins_2025,Magnetospirillum,gryphiswaldense,MSR-1,FALSE,,FALSE,E. coli,17.885371686839,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number CAM77388.1,de Pins 2025,2025
magnetospirillum_de_pins_2025,Magnetospirillum,sp,,FALSE,,TRUE,E. coli,13.8398709481492,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Accession number OJX79267.1,de Pins 2025,2025
magnetospirillum_me-1_de_pins_2025,Magnetospirillum,sp,ME-1,FALSE,,FALSE,E. coli,11.7106600330493,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_085372695.1,de Pins 2025,2025
blakemorei_davidi_2020,Magnetovibrio,blakemorei,,FALSE,,TRUE,E. coli,8.4,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_069958099.1,Davidi 2020,2020
blakemorei_de_pins_2025,Magnetovibrio,blakemorei,,FALSE,,FALSE,E. coli,18.3112138698589,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_069958099.1,de Pins 2025,2025
grandiflora_Yeoh_1981,Magnolia,grandiflora,,FALSE,,TRUE,FALSE,,,,12,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
subovata_Galmés_2005,Malva,subovata,subovata,FALSE,,TRUE,FALSE,,,,,,,,,,92.5,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
esculenta_Hermida-Carrera_2016,Manihot,esculenta,,FALSE,,TRUE,FALSE,1.4,,8.0,6.1,,8.0,335,,,101,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
esculenta_Orr_2016,Manihot,esculenta,,FALSE,,TRUE,FALSE,2.4,,,15,,,566,,,105,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
polymorpha_Galmés_2014b,Marchantia,polymorpha,,FALSE,,TRUE,FALSE,2.6,,,12.7,,,565,,,,,,25,8,6.12,1B,canon,Bryophytes,Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
polymorpha_Hanson_2002,Marchantia,polymorpha,,FALSE,,TRUE,FALSE,2.6,25,8.3,,,,,,,,,,,,na,1B,canon,Bryophytes,Plants,,Hanson 2002,2002
micogutta_davidi_2020,Mariprofundus,micogutta,,FALSE,,TRUE,E. coli,6.6,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Bacteria,Spectroscopic; accession number WP_072659740.1,Davidi 2020,2020
ferrooxydans_de_pins_2025,Mariprofundus,ferrooxydans,,FALSE,,TRUE,E. coli,28.5314262623384,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Bacteria,Accession number WP_009851287.1,de Pins 2025,2025
ferrooxydans_PV1_de_pins_2025,Mariprofundus,ferrooxydans,PV-1,FALSE,,FALSE,E. coli,28.1055840793184,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Metagenome,Accession number WP_009851287.1,de Pins 2025,2025
aestuarium_de_pins_2025,Mariprofundus,aestuarium,,FALSE,,TRUE,E. coli,19.3758193274089,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Bacteria,Accession number WP_100277765.1,de Pins 2025,2025
ferrinatus_de_pins_2025,Mariprofundus,ferrinatus,,FALSE,,TRUE,E. coli,13.8398709481492,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Bacteria,Accession number WP_100265183.1,de Pins 2025,2025
cucullata_hermida-carrera_2020,Maxillaria,cucullata,,FALSE,,TRUE,FALSE,4.4,,,24.2,,,,,,,,,25,8,6.23,1B,canon,C3 plants,Plants,,Hermida-Carrera 2020,2020
arborea_Delgado_1993,Medicago,arborea,citrina,FALSE,,TRUE,FALSE,,,,,,,,,,96.4,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Delgado 1993,1995
medicago_sativa_Hermida-Carrera_2016,Medicago,sativa,Aragon,FALSE,,TRUE,FALSE,1.7,,8.0,9.7,,8.0,373,,,95.6,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
sativa_Jordan_1983,Medicago,sativa,,FALSE,,TRUE,FALSE,,,,15.7,,,,,,77,,,25,8.3,6.23,1B,canon,C3 plants,Plants,Table 1,Jordan 1983,1983
tosanus_Hanson_2002,Megaceros,tosanus,,FALSE,,TRUE,FALSE,3.2,25,8.3,,,,,,,,,,,,na,1B,canon,Bryophytes,Plants,,Hanson 2002,2002
maximus_Ishikawa_2009,Megathyrsus,maximus,,FALSE,,TRUE,FALSE,3.48,,,,,,,,,,,,28,8.2,na,1B,canon,C4 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
maximus_Kent_and_Tomany_1995,Megathyrsus,maximus,,FALSE,,TRUE,FALSE,,,,,,,,,,100.2,25,7.9,,,6.12,1B,canon,C4 plants,Plants,,Kent and Tomany 1995,1995
maximus_Sharwood_2016b,Megathyrsus,maximus,,FALSE,,TRUE,FALSE,5.3,,,13.9,,,265,,,80.3,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
aquatica_Galmés_2005,Mentha,aquatica,,FALSE,,TRUE,FALSE,,,,,,,,,,97.2,25,8.2,,,6.2,1B,canon,Aquatic plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
aquatica_Yeoh_1981,Mentha,aquatica,,FALSE,,TRUE,FALSE,,,,22,25,8.0,,,,,,,,,6.37,1B,canon,Aquatic plants,Plants,,Yeoh 1981,1981
annua_Orr_2016,Mercurialis,annua,,FALSE,,TRUE,FALSE,3.4,,,17,,,417,,,95.7,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
virginica_Kent_and_Tomany_1995,Mertensia,virginica,,FALSE,,TRUE,FALSE,,,,,,,,,,107.2,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
glyptostroboides_Galmés_2014b,Metasequoia,glyptostroboides,,FALSE,,TRUE,FALSE,2.7,,,15.5,,,561,,,,,,25,8,6.12,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
burtonii_Alonso_2009,Methanococcoides,burtonii,,FALSE,,TRUE,E. coli,2,,,130,,,3,,,1.18,,,25,7,6.25,2_3,alt,Archaea,Archaea,L10 induced by addition of RuBP; Sc/o uses Kane method so no pKa correction necessary,Alonso 2009,2009
burtonii_Alonso_2009_in_tobacco,Methanococcoides,burtonii,,FALSE,,TRUE,Tobacco,1.9,,,,,,,,,1.14,,,25,7,6.25,2_3,alt,Archaea,Archaea,Purification from tobacco. Sc/o uses Kane method so no pKa correction necessary,Alonso 2009,2009
burtonii_L2_Alonso_2009,Methanococcoides,burtonii,,TRUE,L2,TRUE,E. coli,1.9,,,,,,,,,1.08,,,25,7,6.25,2_3,alt,Archaea,Archaea,L2 prior to induction to L10 formation by RuBP; Sc/o uses Kane method so no pKa correction necessary,Alonso 2009,2009
vulcani_davidi_2020,Methanococcoides,vulcani,,FALSE,,TRUE,E. coli,2.5,30,8,,,,,,,,,,,,na,2_3,alt,Archaea,Archaea,Spectroscopic; accession number WP_091690387.1,Davidi 2020,2020
burtonii_de_pins_2025,Methanococcoides,burtonii,DSM 6242,FALSE,,FALSE,E. coli,1.7033687320799,30,8,,,,,,,,,,,,na,2_3,alt,Archaea,Archaea,Accession number WP_011500311.1,de Pins 2025,2025
burtonii_Wilson_2016,Methanococcoides,burtonii,,FALSE,,TRUE,Tobacco,0.6,,,56.9,,,11,,,1.3,,8.3,25,8,6.25,2_3,alt,Archaea,Archaea,Methods from Whitney & Sharwood 2007; pKa not needed for Sc/o,Wilson 2016,2016
burtonii_E138V_Wilson_2016,Methanococcoides,burtonii,,TRUE,E138V,TRUE,Tobacco,1,,,66.3,,,35,,,1.5,,8.3,25,8,6.25,2_3,alt,Archaea,Archaea,Methods from Whitney & Sharwood 2007; pKa not needed for Sc/o,Wilson 2016,2016
burtonii_K332E_Wilson_2016,Methanococcoides,burtonii,,TRUE,K332E,TRUE,Tobacco,1.2,,,78.7,,,24,,,1.3,,8.3,25,8,6.25,2_3,alt,Archaea,Archaea,Methods from Whitney & Sharwood 2007; pKa not needed for Sc/o,Wilson 2016,2016
psychrophilus_davidi_2020,Methanolobus,psychrophilus,,FALSE,,TRUE,E. coli,1,30,8,,,,,,,,,,,,na,2_3,alt,Archaea,Archaea,"Spectroscopic; accession number WP_015052263.1; removed from RefSeq for contamination, so might not actually be from Methanolobus psychrophilus",Davidi 2020,2020
psychrophilus_de_pins_2025,Methanolobus,psychrophilus,,FALSE,,FALSE,E. coli,1.7033687320799,30,8,,,,,,,,,,,,na,2_3,alt,Archaea,Archaea,"Accession number WP_015052263.1; removed from RefSeq for contamination, so might not actually be from Methanolobus psychrophilus",de Pins 2025,2025
hollandica_davidi_2020,Methanomethylovorans,hollandica,,FALSE,,TRUE,E. coli,0.6,30,8,,,,,,,,,,,,na,2_3,alt,Archaea,Archaea,Spectroscopic; accession number WP_015325294.1,Davidi 2020,2020
m_hollandica_de_pins_2025,Methanomethylovorans,hollandica,,FALSE,,FALSE,E. coli,3.40673746415981,30,8,,,,,,,,,,,,na,2_3,alt,Archaea,Archaea,Accession number WP_015325294.1,de Pins 2025,2025
zhilinae_davidi_2020,Methanosalsum,zhilinae,,FALSE,,TRUE,E. coli,1,30,8,,,,,,,,,,,,na,2_3,alt,Archaea,Archaea,Spectroscopic; accession number WP_013897574.1,Davidi 2020,2020
zhilinae_de_pins_2025,Methanosalsum,zhilinae,,FALSE,,FALSE,E. coli,2.12921091509988,30,8,,,,,,,,,,,,na,2_3,alt,Archaea,Archaea,Aaccession number WP_013897574.,de Pins 2025,2025
methanothrix_davidi_2020,Methanothrix,sp,,FALSE,,TRUE,E. coli,0.4,30,8,,,,,,,,,,,,na,2_3,alt,Archaea,Archaea,Spectroscopic; accession number WP_013720421.1,Davidi 2020,2020
ishizawaii_de_pins_2024,Methylomagnum,ishizawaii,,FALSE,,TRUE,E. coli,1.0,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Bacteria,Accession number WP_085216190.1,de Pins 2024,2024
ishizawaii_de_pins_2025,Methylomagnum,ishizawaii,,FALSE,,FALSE,E. coli,2.12921091509988,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Bacteria,Accession number WP_085216190.1,de Pins 2025,2025
oryzae_davidi_2020,Methyloterricola,oryzae,,FALSE,,TRUE,E. coli,5.1,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_045226995.1,Davidi 2020,2020
oryzae_de_pins_2025,Methyloterricola,oryzae,,FALSE,,FALSE,E. coli,12.3494233075793,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_045226995.1,de Pins 2025,2025
stipoides_Yeoh_1980,Microlaena,stipoides,,FALSE,,TRUE,FALSE,,,,21,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
lanceolata_Yeoh_1981,Microseris,lanceolata,,FALSE,,TRUE,FALSE,,,,22,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,alpine,Yeoh 1981,1981
sinensis_Ishikawa_2009,Miscanthus,sinensis,,FALSE,,TRUE,FALSE,3.34,,,,,,,,,,,,28,8.2,na,1B,canon,C4 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
montana_Sage_2002b,Muhlenbergia,montana,,FALSE,,TRUE,FALSE,4.93,28,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Sage 2002b,2002
velutina_Orr_2016,Musa,velutina,,FALSE,,TRUE,FALSE,3.2,,,19,,,564,,,111,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
exasperatus_hermida-carrera_2020,Myoxanthus,exasperatus,,FALSE,,TRUE,FALSE,3.7,,,21.3,,,,,,,,,25,8,6.23,1B,canon,C3 plants,Plants,,Hermida-Carrera 2020,2020
propinquum_emergentleaf_Yeoh_1981,Myriophyllum,propinquum,,FALSE,,TRUE,FALSE,,,,37,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,Emergent leaf,Yeoh 1981,1981
propinquum_Yeoh_1981,Myriophyllum,propinquum,,FALSE,,TRUE,FALSE,,,,36,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
verrucosum_Yeoh_1981,Myriophyllum,verrucosum,,FALSE,,TRUE,FALSE,,,,48,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
trichotoma_Yeoh_1980,Nassella,trichotoma,,FALSE,,TRUE,FALSE,,,,20,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
sericea_sakata_2024,Neolitsea,sericea,var aurata,FALSE,,TRUE,FALSE,,,,,,,,,,114.2,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
exaltata_Gago_2013,Nephrolepsis,exaltata,,FALSE,,TRUE,FALSE,,,,,,,,,,99.1,25,8.2,,,6.2,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,Cite Parry et al. 1989 so used their pKa,Gago 2013,2013
munroi_Hudson_1990,Neurachne,munroi,,FALSE,,TRUE,FALSE,,,,18.2,30,8.0,,,,,,,,,6.17,1B,canon,C4 plants,Plants,,Hudson 1990,1990
tenuifolia_Hudson_1990,Neurachne,tenuifolia,,FALSE,,TRUE,FALSE,,,,8,30,8.0,,,,,,,,,6.17,1B,canon,C3 plants,Plants,,Hudson 1990,1990
munroi_Sharwood_2016a,Neurachne,munroi,,FALSE,,TRUE,FALSE,4.4,,,16.4,,,,,,,,,25,8,nf,1B,canon,C4 plants,Plants,No methods; just cite 2008 paper,Sharwood 2016a,2016
tabacum_Delgado_1993,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,,,,,,,,,,89.6,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Delgado 1993,1993
tabacum_Gutteridge_1986,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,,,,,,,,,,90,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"pKa, pH, T from Parry paper describing electrode assay",Gutteridge 1986,1986
tabacum_Iñiguez_2021,Nicotiana,tabacum,,FALSE,,FALSE,FALSE,2.4,,,10.9,,,382,,,83.5,,,25,na,na,1B,canon,C3 plants,Plants,methodology-corrected average from Iñiguez et al. 2021 across multiple cultivars,Iñiguez 2021,2021
tabacum_Jordan_1981,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,,,,11,,,650,,,77,,,25,8.3,6.23,1B,canon,C3 plants,Plants,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
tabacum_Kane_1994,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,,,,,,,,,,81.9,25,8.3,,,na,1B,canon,C3 plants,Plants,CO2/O2 gas mix added in presence of bovine CA; no pKa needed,Kane 1994,1994
tabacum_Makino_1985,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,2.351,,,9.8,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,kcat reported as specific activity,Makino 1985,1985
tabacum_Mate_1993,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,2.73,25,8.3,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Cite Hudson et al. 1992 for methods,Mate 1993,1993
tabacum_Occhialini_2015,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,3.9,,,9,,,292,,,91.2,,,25,8.1,nf,1B,canon,C3 plants,Plants,"Assays in tobacco leaf tissue homogeonate; only cites CO2 concentration, not pKa used for citation. I think it's impossible to determine it from what's given in the paper.",Occhialini 2015,2015
tabacum_Orr_2016,Nicotiana,tabacum,PH,FALSE,,TRUE,FALSE,4.4,,,21.2,,,452,,,96.4,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
tabacum_Parry_1989,Nicotiana,tabacum,Bright Yellow,FALSE,,TRUE,FALSE,,,,,,,,,,89,25,8.2,,,6.2,1B,canon,C3 plants,Plants,,Parry 1989,1989
tabacum_Parry_1993,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,2.2,25,8.0,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Parry 1993,1993
tabacum_Sharwood_2008,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,3.2,,,,,,,,,82.2,,,25,8,na,1B,canon,C3 plants,Plants,Sc/o used Kane method so no pKa correction necessary,Sharwood 2008,2008
tabacum_Sharwood_2016b,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,3.1,,,9.7,,,283,,,82.6,,,25,8.16,6.25,1B,canon,C3 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
tabacum_Sharwood_2017,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,3.1,,,9.4,,,236,,,82.3,,,25,8.2,6.25,1B,canon,C3 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2017,2017
tabacum_Uemura_1996,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,,,,,,,,,,93.1,25,8.3,,,na,1B,canon,C3 plants,Plants,methods paper on measuring S,Uemura 1996,1996
tabacum_Whitney_2001,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,3.4,,8.0,10.7,,,295,,,82,,,25,8.3,6.25,1B,canon,C3 plants,Plants,pKa not needed for Sc/o; assumed 6.25 for pKa as Whitney papers have been using that value since 1999,Whitney 2001,2001
tabacum_Whitney_2011b,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,3.2,,,12.6,,,274,,,81,,,25,7.8,6.25,1B,canon,C3 plants,Plants,,Whitney 2011,2011
tabacum_Young_2016,Nicotiana,tabacum,,FALSE,,TRUE,FALSE,3.1,,,9.7,,,283,,,82,,,25,8,6.25,1B,canon,C3 plants,Plants,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
innocentii_hermida-carrera_2020,Nidularium,innocentii,var. lineatum,FALSE,,TRUE,FALSE,3.4,,,15.5,,,,,,,,,25,8,6.23,1B,canon,C3 plants,Plants,,Hermida-Carrera 2020,2020
nitella_sp_Yeoh_1981,Nitella,sp,,FALSE,,TRUE,FALSE,,,,44,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
nitrincola_davidi_2020,Nitrincola,sp,A-D6,FALSE,,TRUE,E. coli,5.6,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_036522376.1,Davidi 2020,2020
nitrincola_de_pins_2025,Nitrincola,sp,A-D6,FALSE,,FALSE,E. coli,14.0527920396592,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_036522376.1,de Pins 2025,2025
vulgaris_de_pins_2024,Nitrobacter,vulgaris,,FALSE,,TRUE,E. coli,2.1,30,8,,,,,,,,,,,,na,1Ac,,Alphaproteobacteria,Bacteria,Accession number WP_079446767.1,de Pins 2024,2024
vulgaris_de_pins_2025,Nitrobacter,vulgaris,,FALSE,,FALSE,E. coli,4.47134292170975,30,8,,,,,,,,,,,,na,1Ac,,Alphaproteobacteria,Bacteria,Accession number WP_079446767.1,de Pins 2025,2025
eutropha_de_pins_2024,Nitrosomonas,eutropha,,FALSE,,TRUE,E. coli,3.6,30,8,,,,,,,,,,,,na,1Ac,,Betaproteobacteria,Bacteria,Accession number WP_074929473.1,de Pins 2024,2024
eutropha_de_pins_2025,Nitrosomonas,eutropha,,FALSE,,FALSE,E. coli,7.87808038586956,30,8,,,,,,,,,,,,na,1Ac,,Betaproteobacteria,Bacteria,Accession number WP_074929473.1,de Pins 2025,2025
nostoc_sp_Larimer_and_Soper_1993,Nostoc,sp,7120,FALSE,,TRUE,E. coli,2.87646,,,,,,,,,33,,,23,8,6.1,1Bc,canon,Cyanobacteria,Bacteria,"pH from Mural+ 1990, pKa from Harpel & Hartman 1992",Larimer and Soper 1993,1993
orbicularis_Hanson_2002,Notothylas,orbicularis,,FALSE,,TRUE,FALSE,4.2,25,8.3,,,,,,,,,,,,na,1B,canon,Bryophytes,Plants,Pyrenoid,Hanson 2002,2002
alba_Galmés_2014b,Nymphaea,alba,,FALSE,,TRUE,FALSE,2.4,,,11.2,,,438,,,,,,25,8,6.12,1B,canon,Basal angiosperms,Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
gibba_Gago_2013,Oceaniopteris,gibba,,FALSE,,TRUE,FALSE,,,,,,,,,,105.1,25,8.2,,,6.2,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,Cite Parry et al. 1989 so used their pKa,Gago 2013,2013
nakaiana_sakata_2024,Ochrosia,nakaiana,,FALSE,,TRUE,FALSE,,,,,,,,,,105.2,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
luteus_Newman_and_Cattolico_1987,Olisthodiscus,luteus,,FALSE,,TRUE,FALSE,2.4066,,,45,,,,,,,,,23,8.0,6.39,1D,canon,Brown algae,Algae,Used sucrose specific activity * 1.146 from Table 1,Newman and Cattolico 1987,1987
luteus_Read_1994,Olisthodiscus,luteus,,FALSE,,TRUE,FALSE,0.83,,,59,,,692,,,100,,,25,8,6.12,1D,canon,Brown algae,Algae,,Read 1994,1994
lineoligerum_hermida-carrera_2020,Oncidium,lineoligerum,,FALSE,,TRUE,FALSE,2.9,,,14.4,,,,,,,,,25,8,6.23,1B,canon,C3 plants,Plants,,Hermida-Carrera 2020,2020
sensibilis_ito_2024,Onoclea,sensibilis,,FALSE,,TRUE,FALSE,1.48,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Ito 2024,2024
laeve_goudet_2020,Onychonema,laeve,,FALSE,,TRUE,FALSE,2.39,,,27.3,,,,,,,,,25,8.2,6.11,1B,canon,Green algae,Algae,,Goudet 2020,2020
aemulus_Yeoh_1980,Oplismenus,aemulus,,FALSE,,TRUE,FALSE,,,,15,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
oryza_sativa_Hermida-Carrera_2016,Oryza,sativa,Bomba,FALSE,,TRUE,FALSE,2.1,,8.0,8,,8.0,222,,,93.1,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
sativa_Iñiguez_2021,Oryza,sativa,,FALSE,,FALSE,FALSE,1.8,,,9.5,,,332,,,,,,25,na,na,1B,canon,C3 plants,Plants,methodology-corrected average from Iñiguez et al. 2021 across multiple cultivars,Iñiguez 2021,2021
sativa_Ishikawa_2009,Oryza,sativa,,FALSE,,TRUE,FALSE,1.39,,,9.7,,,,,,,,,28,8.2,nf,1B,canon,C3 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
sativa_Ishikawa_2011,Oryza,sativa,,FALSE,,TRUE,FALSE,1.68,,,17.3,,,,,,,,,28,8.2,nf,1B,canon,C3 plants,Plants,Cite Ishikawa 2009 for methods,Ishikawa 2011,2011
sativa_ito_2024,Oryza,sativa,,FALSE,,TRUE,FALSE,1.13,25,8,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Ito 2024,2024
punctata_Kane_1994,Oryza,punctata,Kotschy,FALSE,,TRUE,FALSE,,,,,,,,,,85,25,8.3,,,na,1B,canon,C3 plants,Plants,CO2/O2 gas mix added in presence of bovine CA; no pKa needed,Kane 1994,1994
sativa_Makino_1985,Oryza,sativa,,FALSE,,TRUE,FALSE,1.82,,,8.1,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,kcat reported as specific activity,Makino 1985,1985
australiensis_Makino_1987,Oryza,australiensis,,FALSE,,TRUE,FALSE,2.029,,,11.3,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
brachyantha_Makino_1987,Oryza,brachyantha,,FALSE,,TRUE,FALSE,1.997,,,11.7,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
breviligulata_Makino_1987,Oryza,breviligulata,,FALSE,,TRUE,FALSE,1.888,,,8.3,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
eichingeri_Makino_1987,Oryza,eichingeri,,FALSE,,TRUE,FALSE,2.206,,,10.2,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
glaberrima_Makino_1987,Oryza,glaberrima,,FALSE,,TRUE,FALSE,1.877,,,7.8,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
grandiglumis_Makino_1987,Oryza,grandiglumis,,FALSE,,TRUE,FALSE,2.024,,,10,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
latifolia_Makino_1987,Oryza,latifolia,,FALSE,,TRUE,FALSE,2.08,,,9.7,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
minuta_Makino_1987,Oryza,minuta,,FALSE,,TRUE,FALSE,2.236,,,9.6,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
officinalis_Makino_1987,Oryza,officinalis,,FALSE,,TRUE,FALSE,2.523,,,11.6,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
perennis_Makino_1987,Oryza,perennis,,FALSE,,TRUE,FALSE,2.08,,,10.6,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
punctata_Makino_1987,Oryza,punctata,,FALSE,,TRUE,FALSE,1.899,,,12,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
sativa_Makino_1987,Oryza,sativa,,FALSE,,TRUE,FALSE,2.024,,,10.4,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,,Makino 1987,1987
sativa_Makino_1988,Oryza,sativa,,FALSE,,TRUE,FALSE,2.001,,,8,,,335,,,127.7,,,25,8.15,6.12,1B,canon,C3 plants,Plants,S calculated from Vo given,Makino 1988,1988
barthii/glaberrima_Orr_2016,Oryza,barthii/glaberrima,,FALSE,,TRUE,FALSE,2.5,,,14,,,479,,,107,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
eichingeri_Orr_2016,Oryza,eichingeri,,FALSE,,TRUE,FALSE,2.5,,,14.1,,,612,,,107,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
glaberrima_Orr_2016,Oryza,glaberrima,WAB 1939,FALSE,,TRUE,FALSE,2.7,,,14.9,,,586,,,105,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
glumaepatula_Orr_2016,Oryza,glumaepatula,,FALSE,,TRUE,FALSE,2.4,,,15.2,,,484,,,109,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
longistaminata_Orr_2016,Oryza,longistaminata,,FALSE,,TRUE,FALSE,2.2,,,15.1,,,757,,,108,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
meridionalis_Orr_2016,Oryza,meridionalis,,FALSE,,TRUE,FALSE,2.6,,,14.6,,,382,,,107,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
nivara_Orr_2016,Oryza,nivara,,FALSE,,TRUE,FALSE,2.7,,,15.6,,,611,,,107,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
punctata_Orr_2016,Oryza,punctata,,FALSE,,TRUE,FALSE,2.7,,,14.9,,,342,,,109,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
sativa_indica_Orr_2016,Oryza,sativa,Indica,FALSE,,TRUE,FALSE,2.2,,,7,,,269,,,101,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
sativa_japonica_Orr_2016,Oryza,sativa,Japonica,FALSE,,TRUE,FALSE,2.8,,,11.8,,,469,,,106,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
sativa_Sage_2002b,Oryza,sativa,,FALSE,,TRUE,FALSE,2.69,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sage 2002b,2002
sativa_sugawara_2025,Oryza,sativa,,FALSE,,TRUE,FALSE,1.18,25,8,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sugawara 2025,2025
oryza_sativa_baru_Yeoh_1980,Oryza,sativa,Baru,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
oryza_sativa_calrose_Yeoh_1980,Oryza,sativa,Calrose,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
oscillatoria_de_pins_2024,Oscillatoria,sp,SIO1A7,FALSE,,TRUE,E. coli,7.4,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NER37956.1,de Pins 2024,2024
oscillatoria_de_pins_2025,Oscillatoria,sp,SIO1A7,FALSE,,FALSE,E. coli,16.182002954759,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NER37956.1,de Pins 2025,2025
insularis_sakata_2024,Osmanthus,insularis,,FALSE,,TRUE,FALSE,,,,,,,,,,115.1,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
regalis_Gago_2013,Osmunda,regalis,,FALSE,,TRUE,FALSE,,,,,,,,,,101.5,25,8.2,,,6.2,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,Cite Parry et al. 1989 so used their pKa,Gago 2013,2013
rubra_Orr_2016,Oxybasis,rubra,,FALSE,,TRUE,FALSE,4.1,,,14.5,,,346,,,97.8,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
pavonica_capó-bauçà_2022b,Padina,pavonica,,FALSE,,TRUE,FALSE,2.33,,,18.4,,,2056,,,115.8,,,25,8.1,6.12,1D,canon,Macroalgae,Algae,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022b,2022
cambessedesii_Galmés_2005,Paeonia,cambessedesii,,FALSE,,TRUE,FALSE,,,,,,,,,,94.1,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
ferrophilus_de_pins_2025,Palaeococcus,ferrophilus,DSM 13482,FALSE,,TRUE,E. coli,1.91628982358989,30,8,,,,,,,,,,,,na,3,alt,Archaea,Archaea,Accession number WP_048147752.1,de Pins 2025,2025
tenerrima_capó-bauçà_2022b,Palisada,tenerrima,,FALSE,,TRUE,FALSE,1.65,,,12.2,,,840,,,146.5,,,25,8.1,6.12,1D,canon,Macroalgae,Algae,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022b,2022
maritima_Galmés_2014b,Pallenis,maritima,,FALSE,,TRUE,FALSE,2.7,,,6.4,,,321,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from environments with high osmotic and heat stress; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
decipiens_Iñiguez_2019,Palmaria,decipiens,,FALSE,,TRUE,FALSE,2.43,,,17.4,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
palmata_Iñiguez_2019,Palmaria,palmata,,FALSE,,TRUE,FALSE,2.08,,,15.9,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
coloratum_Ghannoum_2005,Panicum,coloratum,,FALSE,,TRUE,FALSE,2.8,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
decompositum_Ghannoum_2005,Panicum,decompositum,,FALSE,,TRUE,FALSE,3.4,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
miliaceum_Ghannoum_2005,Panicum,miliaceum,,FALSE,,TRUE,FALSE,1.9,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
virgatum_Ghannoum_2005,Panicum,virgatum,,FALSE,,TRUE,FALSE,4.7,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
milioides_Jordan_1983,Panicum,milioides,,FALSE,,TRUE,FALSE,,,,10.4,,,,,,76,,,25,8.3,6.23,1B,canon,C3-C4 plants,Plants,Table 1,Jordan 1983,1983
bergii_Kent_and_Tomany_1995,Panicum,bergii,,FALSE,,TRUE,FALSE,,,,,,,,,,96.7,25,7.9,,,6.12,1B,canon,C4 plants,Plants,,Kent and Tomany 1995,1995
amarum_Orr_2016,Panicum,amarum,,FALSE,,TRUE,FALSE,3.2,,,33.1,,,800,,,89.5,,8.2,25,8,6.11,1B,canon,C4 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
dichotomiflorum_Orr_2016,Panicum,dichotomiflorum,,FALSE,,TRUE,FALSE,3.1,,,36.3,,,1540,,,92.6,,8.2,25,8,6.11,1B,canon,C4 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
phragmitoides_Orr_2016,Panicum,phragmitoides,,FALSE,,TRUE,FALSE,2.8,,,25.1,,,687,,,107,,8.2,25,8,6.11,1B,canon,C4 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
maximum_Seemann_1984,Panicum,maximum,,FALSE,,TRUE,FALSE,6.88,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
antidotale_Sharwood_2016b,Panicum,antidotale,,FALSE,,TRUE,FALSE,3.9,,,,,,,,,74.5,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
bisulcatum_Sharwood_2016b,Panicum,bisulcatum,,FALSE,,TRUE,FALSE,2.6,,,7.8,,,416,,,87.7,,,25,8.16,6.25,1B,canon,C3 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
coloratum_Sharwood_2016b,Panicum,coloratum,,FALSE,,TRUE,FALSE,3.4,,,11.1,,,445,,,84.8,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
deustum_Sharwood_2016b,Panicum,deustum,,FALSE,,TRUE,FALSE,5,,,15.4,,,306,,,84.8,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
miliaceum_Sharwood_2016b,Panicum,miliaceum,,FALSE,,TRUE,FALSE,2.1,,,7.2,,,313,,,79.9,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
milioides_Sharwood_2016b,Panicum,milioides,,FALSE,,TRUE,FALSE,2.2,,,7.4,,,387,,,92.3,,,25,8.16,6.25,1B,canon,C3-C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
monticola_Sharwood_2016b,Panicum,monticola,K1,FALSE,,TRUE,FALSE,5.3,,,18.2,,,543,,,79.4,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
virgatum_Sharwood_2016b,Panicum,virgatum,,FALSE,,TRUE,FALSE,3.3,,,12.7,,,271,,,82.6,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
antidotale_Yeoh_1980,Panicum,antidotale,,FALSE,,TRUE,FALSE,,,,53,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
bisculcatum_Yeoh_1980,Panicum,bisculcatum,,FALSE,,TRUE,FALSE,,,,15,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
decompositum_Yeoh_1980,Panicum,decompositum,,FALSE,,TRUE,FALSE,,,,59,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
lanipes_Yeoh_1980,Panicum,lanipes,,FALSE,,TRUE,FALSE,,,,45,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
maximum_Yeoh_1980,Panicum,maximum,,FALSE,,TRUE,FALSE,,,,37,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
miliaceum_Yeoh_1980,Panicum,miliaceum,,FALSE,,TRUE,FALSE,,,,58,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
milioides_Yeoh_1980,Panicum,milioides,,FALSE,,TRUE,FALSE,,,,13,25,8.0,,,,,,,,,6.37,1B,canon,C3-C4 plants,Plants,,Yeoh 1980,1980
stapfianum_Yeoh_1980,Panicum,stapfianum,,FALSE,,TRUE,FALSE,,,,63,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
nudicaule_Yeoh_1981,Papaver,nudicaule,,FALSE,,TRUE,FALSE,,,,22,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
denitrificans_Bowien_1977,Paracoccus,denitrificans,"381 (ATCC 17741, DSM 65)",FALSE,,TRUE,FALSE,,,,60,30,7.8,,,,,,,,,nf,1C,,Alphaproteobacteria,Bacteria,Cites Bowien 1976 for methods,Bowien 1977,1977
paracoccus_de_pins_2024,Paracoccus,sp,,FALSE,,TRUE,E. coli,1.0,30,8,,,,,,,,,,,,na,1C,,Alphaproteobacteria,Bacteria,Accession number WP_155041937.1,de Pins 2024,2024
paracoccus_de_pins_2025,Paracoccus,sp,,FALSE,,FALSE,E. coli,2.12921091509988,30,8,,,,,,,,,,,,na,1C,,Alphaproteobacteria,Bacteria,Accession number WP_155041937.1,de Pins 2025,2025
denitrificans_Shively_1978,Paracoccus,denitrificans,,FALSE,,TRUE,FALSE,2.09718,,,51,,,,,,,,,30,8,nf,1C,,Alphaproteobacteria,Bacteria,converted from specific activity with 1.146 factor; methods from McFadden et al. 1975 (doi: doi: 10.1016/0076-6879(75)42152-8),Shively 1978,1978
magnetotacticum_davidi_2020,Paramagnetospirillum,magnetotacticum,,FALSE,,TRUE,E. coli,6.3,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number Q8RTI2.1,Davidi 2020,2020
marisnigri_davidi_2020,Paramagnetospirillum,marisnigri,,FALSE,,TRUE,E. coli,5.5,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_068489216.1,Davidi 2020,2020
marisnigri_de_pins_2025,Paramagnetospirillum,marisnigri,,FALSE,,FALSE,E. coli,20.4404247849588,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_068489216.1,de Pins 2025,2025
magneticum_de_pins_2025,Paramagnetospirillum,magneticum,AMB-1,FALSE,,TRUE,E. coli,17.246608412309,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_011385076.1,de Pins 2025,2025
magnetotacticum_MS1_de_pins_2025,Paramagnetospirillum,magnetotacticum,MS-1,FALSE,,TRUE,E. coli,13.6269498566392,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_041041009.1,de Pins 2025,2025
magnetotacticum_de_pins_2025,Paramagnetospirillum,magnetotacticum,,FALSE,,FALSE,E. coli,12.1365022160693,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number Q8RTI2.1,de Pins 2025,2025
photometricum_davidi_2020,Pararhodospirillum,photometricum,,FALSE,,TRUE,E. coli,8.4,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_014416419.1,Davidi 2020,2020
photometricum_de_pins_2025,Pararhodospirillum,photometricum,,FALSE,,FALSE,E. coli,18.9499771443889,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_014416419.1,de Pins 2025,2025
dilatatum_Carmo-Silva_2010,Paspalum,dilatatum,,FALSE,,TRUE,FALSE,3.6,,,19.9,,,415,,,88,,,25,8.2,6.11,1B,canon,C4 plants,Plants,,Carmo-Silva 2010,2010
dilatatum_Ghannoum_2005,Paspalum,dilatatum,,FALSE,,TRUE,FALSE,4.6,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
notatum_Ghannoum_2005,Paspalum,notatum,,FALSE,,TRUE,FALSE,4.9,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ghannoum 2005,2005
dilatatum_Sharwood_2016a,Paspalum,dilatatum,,FALSE,,TRUE,FALSE,5.3,,,17.6,,,,,,,,,25,8,nf,1B,canon,C4 plants,Plants,No methods; just cite 2008 paper,Sharwood 2016a,2016
notatum_Sharwood_2016a,Paspalum,notatum,,FALSE,,TRUE,FALSE,4.5,,,16.2,,,,,,,,,25,8,nf,1B,canon,C4 plants,Plants,No methods; just cite 2008 paper,Sharwood 2016a,2016
lucida_Delgado_1993,Pastinaca,lucida,,FALSE,,TRUE,FALSE,,,,,,,,,,84.7,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Delgado 1993,1995
lutheri_Heureux_2017,Pavlova,lutheri,,FALSE,,TRUE,FALSE,2.5,,,14.5,,,1150,,,125,,,25,8.16,6.251,1D,canon,Haptophytes,Algae,"Methods same as Sharwood 2016 - assuming pH reported there for 25 C. Uses 2 pKa model, not clear if correction should apply",Heureux 2017,2017
falcata_Yeoh_1981,Pellaea,falcata,,FALSE,,TRUE,FALSE,,,,19,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
methylotrophicum_de_pins_2024,Pelomicrobium,methylotrophicum,,FALSE,,TRUE,E. coli,1.8,30,8,,,,,,,,,,,,na,1Ac,,Hydrogenophilia,Bacteria,Accession number TXF10942.1,de Pins 2024,2024
methylotrophicum_de_pins_2025,Pelomicrobium,methylotrophicum,,FALSE,,FALSE,E. coli,3.83257964717978,30,8,,,,,,,,,,,,na,1Ac,,Hydrogenophilia,Bacteria,Accession number TXF10942.1,de Pins 2025,2025
typhoides_Yeoh_1980,Pennisetum,typhoides,,FALSE,,TRUE,FALSE,,,,54,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
crispum_Jordan_1983,Petroselinum,crispum,,FALSE,,TRUE,FALSE,,,,11.6,,,,,,77,,,25,8.3,6.23,1B,canon,C3 plants,Plants,Table 1,Jordan 1983,1983
crispum_Yeoh_1981,Petroselinum,crispum,,FALSE,,TRUE,FALSE,,,,21,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
carolinianus_Hanson_2002,Phaeoceros,carolinianus,,FALSE,,TRUE,FALSE,4.25,25,8.3,,,,,,,,,,,,na,1B,canon,Bryophytes,Plants,Pyrenoid,Hanson 2002,2002
tricornutum_Whitney_2001,Phaeodactylum,tricornutum,,FALSE,,TRUE,FALSE,3.4,,8.0,27.9,,,467,,,113,,,25,8.3,6.25,1D,canon,Diatoms,Algae,pKa not needed for Sc/o; assumed 6.25 for pKa as Whitney papers have been using that value since 1999,Whitney 2001,2001
tricornutum_CS_29_Young_2016,Phaeodactylum,tricornutum,CS-29,FALSE,,TRUE,FALSE,3.3,,,41,,,664,,,116,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
tricornutum_UTEX_642_Young_2016,Phaeodactylum,tricornutum,UTEX 642,FALSE,,TRUE,FALSE,3.2,,,36,,,592,,,108,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
vinaykumarii_davidi_2020,Phaeovulum,vinaykumarii,,FALSE,,TRUE,E. coli,6.4,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_076365084.1,Davidi 2020,2020
vinaykumarii_de_pins_2025,Phaeovulum,vinaykumarii,,FALSE,,FALSE,E. coli,11.4977389415393,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_076365084.1,de Pins 2025,2025
brachystachya_Yeoh_1980,Phalaris,brachystachya,,FALSE,,TRUE,FALSE,,,,19,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
phaseolus_vulgaris_Hermida-Carrera_2016,Phaseolus,vulgaris,Contender,FALSE,,TRUE,FALSE,1.7,,8.0,7.8,,8.0,325,,,99.7,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
vulgaris_Iñiguez_2021,Phaseolus,vulgaris,,FALSE,,FALSE,FALSE,2.4,25,,,,,,,,,,,,na,na,1B,canon,C3 plants,Plants,methodology-corrected average from Iñiguez et al. 2021 across multiple cultivars,Iñiguez 2021,2021
carteri_Orr_2016,Phaseolus,carteri,,FALSE,,TRUE,FALSE,3.2,,,14.2,,,422,,,84.5,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
coccineus_Orr_2016,Phaseolus,coccineus,,FALSE,,TRUE,FALSE,3.9,,,15.6,,,491,,,104,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
lunatus_Orr_2016,Phaseolus,lunatus,,FALSE,,TRUE,FALSE,3.2,,,17.3,,,537,,,101,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
phaseolus_vulgaris_Orr_2016,Phaseolus,vulgaris,,FALSE,,TRUE,FALSE,3.5,,,20.2,,,463,,,105,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
acutifolius_Sage_1993,Phaseolus,acutifolius,,FALSE,,TRUE,FALSE,2.688,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
angustissimus_Sage_1993,Phaseolus,angustissimus,,FALSE,,TRUE,FALSE,2.575,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
coccineus_Sage_1993,Phaseolus,coccineus,,FALSE,,TRUE,FALSE,2.425,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
filiformis_Sage_1993,Phaseolus,filiformis,,FALSE,,TRUE,FALSE,2.738,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
glabellus_Sage_1993,Phaseolus,glabellus,,FALSE,,TRUE,FALSE,2.4,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
grayanus_Sage_1993,Phaseolus,grayanus,,FALSE,,TRUE,FALSE,2.588,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
leptostachys_Sage_1993,Phaseolus,leptostachys,,FALSE,,TRUE,FALSE,2.388,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
lunatus_Sage_1993,Phaseolus,lunatus,,FALSE,,TRUE,FALSE,2.338,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
maculatus_Sage_1993,Phaseolus,maculatus,,FALSE,,TRUE,FALSE,2.325,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
microcarpus_Sage_1993,Phaseolus,microcarpus,,FALSE,,TRUE,FALSE,3.013,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
vulgaris_Provider_Sage_1993,Phaseolus,vulgaris,c.v. Provider,FALSE,,TRUE,FALSE,2.338,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
vulgaris_PI201010_Sage_1993,Phaseolus,vulgaris,PI201010,FALSE,,TRUE,FALSE,2.5,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
vulgaris_Linden_Sage_1993,Phaseolus,vulgaris,c.v. Linden,FALSE,,TRUE,FALSE,2.6,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
vulgaris_aborigineus_Sage_1993,Phaseolus,vulgaris,var. aborigineus,FALSE,,TRUE,FALSE,2.613,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
vulgaris_Panameno_Sage_1993,Phaseolus,vulgaris,Panameno,FALSE,,TRUE,FALSE,2.65,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
vulgaris_Jamapa_Sage_1993,Phaseolus,vulgaris,Jamapa,FALSE,,TRUE,FALSE,2.675,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
xanthotrichus_Sage_1993,Phaseolus,xanthotrichus,,FALSE,,TRUE,FALSE,2.325,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Molar activity so divided by 8 from numbers in Table 2; cites Sharkey 1986 for methods,Sage 1993,1993
vulgaris_Sage_2002a,Phaseolus,vulgaris,,FALSE,,TRUE,FALSE,2.645,25,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Cite Sage 1993,Sage 2002a,2002
vulgaris_Seemann_1984,Phaseolus,vulgaris,,FALSE,,TRUE,FALSE,3.21,30,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
aureum_Jordan_1983,Phlebodium,aureum,,FALSE,,TRUE,FALSE,,,,16.1,,,,,,82,,,25,8.3,6.23,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,Table 1,Jordan 1983,1983
alpinum_Ishikawa_2009,Phleum,alpinum,,FALSE,,TRUE,FALSE,2.22,,,21.6,,,,,,,,,28,8.2,nf,1B,canon,C3 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
pratense_Ishikawa_2009,Phleum,pratense,,FALSE,,TRUE,FALSE,2.18,,,16.4,,,,,,,,,28,8.2,nf,1B,canon,C3 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
italica_Galmés_2005,Phlomis,italica,,FALSE,,TRUE,FALSE,,,,,,,,,,100.8,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
wrightiana_sakata_2024,Photinia,wrightiana,,FALSE,,TRUE,FALSE,,,,,,,,,,109.6,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
phragmites_australis_Yeoh_1980,Phragmites,australis,,FALSE,,TRUE,FALSE,,,,20,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
rubens_Iñiguez_2019,Phycodrys,rubens,,FALSE,,TRUE,FALSE,1.76,,,18.9,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
phymatodes_oh_2024,Phymatoceros,phymatodes,,FALSE,,TRUE,E. coli,6.4,,,29.6,,,,,,70.5,,8.3,25,8,nf,1B,canon,Bryophytes,Plants,Kane method for Sc/o so no pKa needed; pKa for Kc not available,Oh 2024,2024
abies_sugawara_2025,Picea,abies,,FALSE,,TRUE,FALSE,1.4,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Sugawara 2025,2025
parviflora_sugawara_2025,Pinus,parviflora,,FALSE,,TRUE,FALSE,1.59,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Sugawara 2025,2025
densiflora_sugawara_2025,Pinus,densiflora,,FALSE,,TRUE,FALSE,1.71,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Sugawara 2025,2025
montezumae_Yeoh_1981,Pinus,montezumae,,FALSE,,TRUE,FALSE,,,,24,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
lentiscus_Galmés_2005,Pistacia,lentiscus,,FALSE,,TRUE,FALSE,,,,,,,,,,97.2,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
sativum_Uemura_1996,Pisum,sativum,,FALSE,,TRUE,FALSE,,,,,,,,,,90.2,25,8.3,,,na,1B,canon,C3 plants,Plants,methods paper on measuring S,Uemura 1996,1996
obovata_sakata_2024,Planchonella,obovata,var dubia,FALSE,,TRUE,FALSE,,,,,,,,,,113.6,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
superbum_Galmés_2014b,Platycerium,superbum,,FALSE,,TRUE,FALSE,2.3,,,12.4,,,459,,,,,,25,8,6.12,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
carterae_Heureux_2017,Pleurochrysis,carterae,,FALSE,,TRUE,FALSE,3.3,,,17.7,,,366,,,102,,,25,8.16,6.251,1D,canon,Haptophytes,Algae,"Methods same as Sharwood 2016 - assuming pH reported there for 25 C. Uses 2 pKa model, not clear if correction should apply. ",Heureux 2017,2017
arctica_Ishikawa_2009,Poa,arctica,,FALSE,,TRUE,FALSE,1.93,,,14.6,,,,,,,,,28,8.2,nf,1B,canon,C3 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
palustris_Orr_2016,Poa,palustris,,FALSE,,TRUE,FALSE,4.2,,,19.2,,,562,,,112,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
arctica_Sage_2002b,Poa,arctica,,FALSE,,TRUE,FALSE,4.03,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sage 2002b,2002
pratensis_Sage_2002b,Poa,pratensis,,FALSE,,TRUE,FALSE,3.01,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sage 2002b,2002
helmsii_Yeoh_1980,Poa,helmsii,,FALSE,,TRUE,FALSE,,,,21,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
hiemata_Yeoh_1980,Poa,hiemata,,FALSE,,TRUE,FALSE,,,,20,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
hiemata_Yeoh_1981,Poa,hiemata,,FALSE,,TRUE,FALSE,,,,20,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
naphthalenivorans_davidi_2020,Polaromonas,naphthalenivorans,,FALSE,,TRUE,E. coli,1.2,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Spectroscopic; accession number WP_011801368.1,Davidi 2020,2020
naphthalenivorans_de_pins_2025,Polaromonas,naphthalenivorans,,FALSE,,FALSE,E. coli,9.58144911794946,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number WP_011801368.1,de Pins 2025,2025
monspeliensis_Yeoh_1980,Polypogon,monspeliensis,,FALSE,,TRUE,FALSE,,,,19,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
nigra_Yeoh_1981,Populus,nigra,italica,FALSE,,TRUE,FALSE,,,,19,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
yezoensis_Uemura_1996,Porphyra,yezoensis,,FALSE,,TRUE,FALSE,,,,,,,,,,145,25,8.3,,,na,1D,canon,Red algae,Algae,methods paper on measuring S,Uemura 1996,1996
cruentum_Read_1994,Porphyridium,cruentum,,FALSE,,TRUE,FALSE,1.59,,,22,,,1570,,,129,,,25,8,6.12,1D,canon,Red algae,Algae,,Read 1994,1994
purpureum_Uemura_1997,Porphyridium,purpureum,,FALSE,,TRUE,FALSE,,,,,,,,,,144,25,8,,,na,1D,canon,Red algae,Algae,,Uemura 1997,1997
oleracea_Jordan_1983,Portulaca,oleracea,,FALSE,,TRUE,FALSE,,,,13.6,,,,,,78,,,25,8.3,6.23,1B,canon,C4 plants,Plants,Table 1,Jordan 1983,1983
oleracea_Sage_2002b,Portulaca,oleracea,,FALSE,,TRUE,FALSE,5.94,28,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Sage 2002b,2002
oceanica_capó-bauçà_2022a,Posidonia,oceanica,,FALSE,,TRUE,FALSE,2.17,,,35.1,,,1328.2,,,91,,,25,8.1,6.12,1B,canon,Aquatic plants,Plants,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022a,2022
angustifolia_capó-bauçà_2023,Posidonia,angustifolia,,FALSE,,TRUE,FALSE,1.9,,,22,,,1313,,,93.3,,,25,8.05,6.25,1B,canon,Aquatic plants,Plants,Used Kane method for Sc/o so no need for pKa; pKa for Kc from Sharwood 2016 via Iñiguez 2021,Capó-Bauçà 2023,2023
australis_capó-bauçà_2023,Posidonia,australis,,FALSE,,TRUE,FALSE,1.84,,,21.1,,,1142,,,91.5,,,25,8.05,6.25,1B,canon,Aquatic plants,Plants,Used Kane method for Sc/o so no need for pKa; pKa for Kc from Sharwood 2016 via Iñiguez 2021,Capó-Bauçà 2023,2023
coriacea_capó-bauçà_2023,Posidonia,coriacea,,FALSE,,TRUE,FALSE,2.13,,,20.1,,,1139,,,90,,,25,8.05,6.25,1B,canon,Aquatic plants,Plants,Used Kane method for Sc/o so no need for pKa; pKa for Kc from Sharwood 2016 via Iñiguez 2021,Capó-Bauçà 2023,2023
sinuosa_capó-bauçà_2023,Posidonia,sinuosa,,FALSE,,TRUE,FALSE,1.41,,,19.6,,,995,,,93.1,,,25,8.05,6.25,1B,canon,Aquatic plants,Plants,Used Kane method for Sc/o so no need for pKa; pKa for Kc from Sharwood 2016 via Iñiguez 2021,Capó-Bauçà 2023,2023
oceanica_capó-bauçà_2023,Posidonia,oceanica,,FALSE,,TRUE,FALSE,2.19,,,45,,,1329,,,90.1,,,25,8.05,6.25,1B,canon,Aquatic plants,Plants,Used Kane method for Sc/o so no need for pKa; pKa for Kc from Sharwood 2016 via Iñiguez 2021,Capó-Bauçà 2023,2023
crispus_Yeoh_1981,Potamogeton,crispus,,FALSE,,TRUE,FALSE,,,,43,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
ochreatus_Yeoh_1981,Potamogeton,ochreatus,,FALSE,,TRUE,FALSE,,,,49,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
tricarinatus_Yeoh_1981,Potamogeton,tricarinatus,,FALSE,,TRUE,FALSE,,,,43,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
prochlorococcus_1_de_pins_2024,Prochlorococcus,sp,,FALSE,,TRUE,E. coli,8.1,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_011130576.1,de Pins 2024,2024
marinus_de_pins_2024,Prochlorococcus,marinus,,FALSE,,TRUE,E. coli,6.0,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Metagenome,Accession number TARA_128.SAMEA2622923.40.0.22-3_753667_20,de Pins 2024,2024
prochlorococcus_2_de_pins_2024,Prochlorococcus,sp,,FALSE,,TRUE,E. coli,5.1,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_158466229.1,de Pins 2024,2024
prochlorococcus1_de_pins_2025,Prochlorococcus,sp,,FALSE,,FALSE,E. coli,17.459529503819,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_011130576.1,de Pins 2025,2025
p_marinus_de_pins_2025,Prochlorococcus,marinus,,FALSE,,FALSE,E. coli,12.9881865821092,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Metagenome,Accession number TARA_128.SAMEA2622923.40.0.22-3_753667_20,de Pins 2025,2025
prochlorococcus2_de_pins_2025,Prochlorococcus,sp,,FALSE,,FALSE,E. coli,10.8589756670093,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_158466229.1,de Pins 2025,2025
marinus_Shih_2016,Prochlorococcus,marinus,MIT9313,FALSE,,TRUE,E. coli,6.58,,,309,,,1400,,,59.9,,,25,8,6.11,1Ac,canon,Cyanobacteria,Bacteria,pKa from Iniguez et al. 2021,Shih 2016,2016
hollandica_de_pins_2024,Prochlorothrix,hollandica,,FALSE,,TRUE,E. coli,8.2,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_017713779.1,de Pins 2024,2024
p_hollandica_de_pins_2025,Prochlorothrix,hollandica,,FALSE,,FALSE,E. coli,17.672450595329,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_017713779.1,de Pins 2025,2025
breve_banda_2020,Promineifilum,breve,,FALSE,,TRUE,E. coli,2.23,,,22.2,,,401,,,36.1,,8.2,25,8,6.11,1’,,Chloroflexi,Bacteria,,Banda 2020,2020
breve_de_pins_2025,Promineifilum,breve,,FALSE,,TRUE,E. coli,2.34213200660986,30,8,,,,,,,,,,,,na,1’,,Ardenticatenia,Metagenome,Accession number WP_095045405.1; record suppressed but highest hits to BLAST from same species,de Pins 2025,2025
superfundia_davidi_2020,Propionicicella,superfundia,,FALSE,,TRUE,E. coli,7.7,30,8,,,,,,,,,,,,na,2,,Actinomycetes,Bacteria,Spectroscopic; accession number WP_028708174.1,Davidi 2020,2020
superfundia_de_pins_2025,Propionicicella,superfundia,,FALSE,,FALSE,E. coli,18.9499771443889,30,8,,,,,,,,,,,,na,2,,Actinomycetes,Bacteria,Accession number WP_028708174.1,de Pins 2025,2025
minimum_davidi_2020,Prorocentrum,minimum,,FALSE,,TRUE,E. coli,5.3,30,8,,,,,,,,,,,,na,2,,Dinoflagellates,Algae,Spectroscopic; accession number AAQ04822.2,Davidi 2020,2020
minimum_de_pins_2025,Prorocentrum,minimum,,FALSE,,FALSE,E. coli,11.9235811245593,30,8,,,,,,,,,,,,na,2,,Dinoflagellates,Algae,Accession number AAQ04822.2,de Pins 2025,2025
pseudodesulfovibrio_davidi_2020,Pseudodesulfovibrio,sp,,FALSE,,TRUE,E. coli,2.8,30,8,,,,,,,,,,,,na,2,,Desulfovibrionia,Bacteria,Spectroscopic; accession number WP_013515453.1,Davidi 2020,2020
pseudodesulfovibrio_de_pins_2025,Pseudodesulfovibrio,sp,,FALSE,,FALSE,E. coli,8.72976475190951,30,8,,,,,,,,,,,,na,2,,Desulfovibrionia,Bacteria,Accession number WP_013515453.1,de Pins 2025,2025
blasticum_de_pins_2025,Pseudogemmobacter,blasticum,,FALSE,,TRUE,E. coli,19.5887404189189,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_108643609.1,de Pins 2025,2025
blasticum_2131_de_pins_2025,Pseudogemmobacter,blasticum,DSM 2131,FALSE,,TRUE,E. coli,18.0982927783489,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_107672544.1,de Pins 2025,2025
pseudonocardia_de_pins_2024,Pseudonocardia,sp,N23,FALSE,,TRUE,E. coli,3.9,30,8,,,,,,,,,,,,na,1Ac,,Actinomycetes,Bacteria,Accession number WP_098958429.1,de Pins 2024,2024
pseudonocardia_de_pins_2025,Pseudonocardia,sp,N23,FALSE,,FALSE,E. coli,8.51684366039952,30,8,,,,,,,,,,,,na,1Ac,,Actinomycetes,Bacteria,Accession number WP_098958429.1,de Pins 2025,2025
cattleyanum_sakata_2024,Psidium,cattleyanum,,FALSE,,TRUE,FALSE,,,,,,,,,,81.8,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
guajava_sakata_2024,Psidium,guajava,,FALSE,,TRUE,FALSE,,,,,,,,,,96.7,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
nudum_Yeoh_1981,Psilotum,nudum,,FALSE,,TRUE,FALSE,,,,23,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
aquilinum_Galmés_2014b,Pteridium,aquilinum,,FALSE,,TRUE,FALSE,4,,,13.9,,,391,,,,,,25,8,6.12,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
aquilinum_ito_2024,Pteridium,aquilinum,,FALSE,,TRUE,FALSE,1.92,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Ito 2024,2024
esculentum_Yeoh_1981,Pteridium,esculentum,,FALSE,,TRUE,FALSE,,,,20,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
gunneri_Iñiguez_2019,Ptilota,gunneri,,FALSE,,TRUE,FALSE,1.6,,,14.4,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
distans_Orr_2016,Puccinellia,distans,,FALSE,,TRUE,FALSE,5.4,,,22.2,,,488,,,104,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
lemmonii_Orr_2016,Puccinellia,lemmonii,,FALSE,,TRUE,FALSE,5.2,,,28.1,,,1120,,,102,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
maritima_Orr_2016,Puccinellia,maritima,,FALSE,,TRUE,FALSE,5.4,,,20.8,,,676,,,106,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
nuttalliana_Orr_2016,Puccinellia,nuttalliana,,FALSE,,TRUE,FALSE,4,,,25.2,,,717,,,105,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
montana_Orr_2016,Pueraria,montana,,FALSE,,TRUE,FALSE,2.7,,,20.9,,,679,,,101,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
lobata_Sage_2002b,Pueraria,lobata,,FALSE,,TRUE,FALSE,2.51,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sage 2002b,2002
ilex_Balaguer_1996,Quercus,ilex,,FALSE,,TRUE,FALSE,,,,,,,,,,93.3,25,8.2,,,6.2,1B,canon,C3 plants,Plants,,Balaguer 1996,1996
robur_Balaguer_1996,Quercus,robur,,FALSE,,TRUE,FALSE,,,,,,,,,,102.33,25,8.2,,,6.2,1B,canon,C3 plants,Plants,,Balaguer 1996,1996
alaternus_Galmés_2005,Rhamnus,alaternus,,FALSE,,TRUE,FALSE,,,,,,,,,,94.7,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
ludovici-salvatoris_Galmés_2005,Rhamnus,ludovici-salvatoris,,FALSE,,TRUE,FALSE,,,,,,,,,,94.4,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
indica_sakata_2024,Rhaphiolepsis,indica,var umbellata,FALSE,,TRUE,FALSE,,,,,,,,,,104.1,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
aegyptiacum_de_pins_2024,Rhizobium,aegyptiacum,,FALSE,,TRUE,E. coli,2.1,30,8,,,,,,,,,,,,na,1C,,Alphaproteobacteria,Bacteria,Accession number WP_064697605.1,de Pins 2024,2024
rhizobium_de_pins_2024,Rhizobium,sp,,FALSE,,TRUE,E. coli,2.6,30,8,,,,,,,,,,,,na,1C,,Alphaproteobacteria,Metagenome,Accession number MBC7152521.1,de Pins 2024,2024
rhizobium_de_pins_2025,Rhizobium,sp,,FALSE,,FALSE,E. coli,5.74886947076968,30,8,,,,,,,,,,,,na,1C,,Alphaproteobacteria,Metagenome,Accession number MBC7152521.1,de Pins 2025,2025
aegyptiacum_de_pins_2025,Rhizobium,aegyptiacum,,FALSE,,FALSE,E. coli,4.68426401321973,30,8,,,,,,,,,,,,na,1C,,Alphaproteobacteria,Bacteria,Accession number WP_064697605.1,de Pins 2025,2025
ferrooxidans_davidi_2020,Rhodobacter,ferrooxidans,,FALSE,,TRUE,E. coli,7.2,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_008027438.1,Davidi 2020,2020
maris_de_pins_2025,Rhodobacter,maris,,FALSE,,TRUE,E. coli,20.2275036934488,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_097070532.1,de Pins 2025,2025
rhodobacter_de_pins_2025,Rhodobacter,sp,,FALSE,,TRUE,E. coli,20.0145826019388,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_076483499.1; matches multiple Rhodobacter species,de Pins 2025,2025
capsulatus1_de_pins_2025,Rhodobacter,capsulatus,,FALSE,,TRUE,E. coli,18.9499771443889,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_074553303.1,de Pins 2025,2025
capsulatus2_de_pins_2025,Rhodobacter,capsulatus,,FALSE,,TRUE,E. coli,17.033687320799,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_055208325.1; matches multiple strains,de Pins 2025,2025
viridis_de_pins_2025,Rhodobacter,viridis,JA737,FALSE,,TRUE,E. coli,17.033687320799,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_110804070.1,de Pins 2025,2025
capsulatus3_de_pins_2025,Rhodobacter,capsulatus,,FALSE,,TRUE,E. coli,16.607845137779,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_023911418.1; matches multiple strains,de Pins 2025,2025
r_ferrooxidans_de_pins_2025,Rhodobacter,ferrooxidans,,FALSE,,FALSE,E. coli,16.182002954759,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_008027438.1,de Pins 2025,2025
capsulatus_Horken_and_Tabita_1999,Rhodobacter,capsulatus,,FALSE,,TRUE,FALSE,3.7,,,29,,,,,,25.9,23,,30,8,nf,1C,,Alphaproteobacteria,Bacteria,No pKa reported and cite Gibson & Tabita 1977 for assay conditions. Used assay conditions mentioned in legend to Table 1.,Horken and Tabita 1999,1999
acidophilus_davidi_2020,Rhodoblastus,acidophilus,,FALSE,,TRUE,E. coli,6.6,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_088518856.1,Davidi 2020,2020
acidophilus_de_pins_2025,Rhodoblastus,acidophilus,,FALSE,,FALSE,E. coli,14.6915553141891,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_088518856.1,de Pins 2025,2025
rhodoferax_davidi_2020,Rhodoferax,sp,CG_Rhodof_01,FALSE,,TRUE,E. coli,3,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Spectroscopic; accession number cg2_3.0_scaffold_9542_c_2,Davidi 2020,2020
rhodoferax_de_pins_2025,Rhodoferax,sp,CG_Rhodof_01,FALSE,,FALSE,E. coli,10.6460545754994,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number cg2_3.0_scaffold_9542_c_2,de Pins 2025,2025
palustris_davidi_2020,Rhodopseudomonas,palustris,,FALSE,,TRUE,E. coli,6.4,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number AAK39106.1,Davidi 2020,2020
palustris_BisB18_de_pins_2025,Rhodopseudomonas,palustris,BisB18,FALSE,,TRUE,E. coli,18.5241349613689,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_011473338.1,de Pins 2025,2025
palustris_CGA009_de_pins_2025,Rhodopseudomonas,palustris,CGA009,FALSE,,TRUE,E. coli,16.182002954759,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_011160173.1; matches multiple strains,de Pins 2025,2025
palustris_de_pins_2025,Rhodopseudomonas,palustris,,FALSE,,FALSE,E. coli,14.4786342226791,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number AAK39106.1,de Pins 2025,2025
palustris_A47V_Satagopan_2014,Rhodopseudomonas,palustris,,TRUE,A47V,TRUE,R. capsulatus/E. coli,0.9,,,99,,,82,,,11,,,30,8,6.14,2,,Alphaproteobacteria,Bacteria,pKa from Iniguez et al. 2021,Satagopan 2014,2014
palustris_A47V/M331A_Satagopan_2014,Rhodopseudomonas,palustris,,TRUE,A47V/M331A,TRUE,R. capsulatus/E. coli,0.2,,,433,,,697,,,6,,,30,8,6.14,2,,Alphaproteobacteria,Bacteria,pKa from Iniguez et al. 2021,Satagopan 2014,2014
palustris_I65V_Satagopan_2014,Rhodopseudomonas,palustris,,TRUE,I65V,TRUE,R. capsulatus/E. coli,1.3,,,178,,,391,,,4,,,30,8,6.14,2,,Alphaproteobacteria,Bacteria,pKa from Iniguez et al. 2021,Satagopan 2014,2014
palustris_RrCt_Satagopan_2014,Rhodopseudomonas,palustris,,TRUE,RrCt,TRUE,R. capsulatus/E. coli,6.7,,,111,,,270,,,13,,,30,8,6.14,2,,Alphaproteobacteria,Bacteria,pKa from Iniguez et al. 2021; chimera with C-terminal sequence from R. rubrum,Satagopan 2014,2014
palustris_Satagopan_2014,Rhodopseudomonas,palustris,CGA009,FALSE,,TRUE,R. capsulatus,4.9,,,104,,,277,,,12,,,30,8,6.14,2,,Alphaproteobacteria,Bacteria,pKa from Iniguez et al. 2021,Satagopan 2014,2014
rubrum_Alonso_2009,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,,,,,,,,,,8.1,25,7,,,na,2,,Alphaproteobacteria,Bacteria,"Only measured S here, assumed purified from E. coli like M burtonii; Sc/o uses Kane method so no pKa correction necessary",Alonso 2009,2009
rubrum_Andrews_&_Lorimer_1985,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,,,,,,,,,,14.5,25,8.52,,,6.12,2,,Alphaproteobacteria,Bacteria,Figure 3,Andrews & Lorimer 1985,1985
rubrum_de_pins_2024,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,6.8,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,,de Pins 2024,2024
rubrum_de_pins_2025,Rhodospirillum,rubrum,,FALSE,,FALSE,E. coli,14.6915553141891,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,,de Pins 2025,2025
rubrum_A198E_Gutteridge_1984,Rhodospirillum,rubrum,,TRUE,A198E,TRUE,E. coli,4.8,,,142,,,,,,7.6,,,25,8.2,nf,2,,Alphaproteobacteria,Bacteria,Cite McFadden 1974 & Lorimer 1977 as methods,Gutteridge 1984,1984
rubrum_Gutteridge_1984,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,5.9,,,84,,,,,,7.6,,,25,8.2,nf,2,,Alphaproteobacteria,Bacteria,Cite McFadden 1974 & Lorimer 1977 as methods,Gutteridge 1984,1984
rubrum_Gutteridge_1986,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,,,,,,,,,,11,25,8.2,,,6.2,2,,Alphaproteobacteria,Bacteria,"pKa, pH, T from Parry paper describing electrode assay",Gutteridge 1986,1986
rubrum_Iñiguez_2021,Rhodospirillum,rubrum,,FALSE,,FALSE,FALSE,4.3,,,78.4,,,242,,,11.3,,,25,na,na,2,,Alphaproteobacteria,Bacteria,methodology-corrected average from Iñiguez et al. 2021 across multiple strains,Iñiguez 2021,2021
rubrum_Jordan_1981,Rhodospirillum,rubrum,,FALSE,,TRUE,FALSE,,,,89,,,406,,,15,,,25,8.3,6.23,2,,Alphaproteobacteria,Bacteria,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
rubrum_Jordan_1984,Rhodospirillum,rubrum,,FALSE,,TRUE,FALSE,,,,,,,,,,12,25,8.2,,,na,2,,Alphaproteobacteria,Bacteria,Table 3; Sc/o determined with gas method so pKa adjustment was not necessary,Jordan 1984,1984
rubrum_Kane_1994,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,,,,,,,,,,12.3,25,8.3,,,na,2,,Alphaproteobacteria,Bacteria,CO2/O2 gas mix added in presence of bovine CA; no pKa needed,Kane 1994,1994
rubrum_Kent_and_Tomany_1984,Rhodospirillum,rubrum,,FALSE,,TRUE,FALSE,,,,,,,,,,8.3,25,7.9,,,nf,2,,Alphaproteobacteria,Bacteria,,Kent and Tomany 1984,1984
rubrum_Lee_G.J._1993,Rhodospirillum,rubrum,,FALSE,,TRUE,FALSE,,,,,,,,,,15,25,8,,,6.15,2,,Alphaproteobacteria,Bacteria,,Lee G.J. 1993,1993
rubrum_liu_2023,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,4.97,25,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,,Liu 2023,2023
rubrum_Morell_1990,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,7.3,,,67,,,,,,,,,25,7.8,6.12,2,,Alphaproteobacteria,Bacteria,,Morell 1990,1990
rubrum_D117H_Mueller-Cajar_2007,Rhodospirillum,rubrum,,TRUE,D117H,TRUE,E. coli,7.5,,,192,,,153,,,5.3,,8.3,25,8,6.25,2,,Alphaproteobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2007,2007
rubrum_D117V_Mueller-Cajar_2007,Rhodospirillum,rubrum,,TRUE,D117V,TRUE,E. coli,7.4,,,196,,,199,,,5.3,,8.3,25,8,6.25,2,,Alphaproteobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2007,2007
rubrum_H44N_Mueller-Cajar_2007,Rhodospirillum,rubrum,,TRUE,H44N,TRUE,E. coli,9.8,,,204,,,116,,,5.5,,8.3,25,8,6.25,2,,Alphaproteobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2007,2007
rubrum_H44Q_Mueller-Cajar_2007,Rhodospirillum,rubrum,,TRUE,H44Q,TRUE,E. coli,9.3,,,301,,,185,,,5.3,,8.3,25,8,6.25,2,,Alphaproteobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2007,2007
rubrum_Mueller-Cajar_2007,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,12.3,,,149,,,159,,,9,,8.3,25,8,6.25,2,,Alphaproteobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2007,2007
rubrum_Parry_1989,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,,,,,,,,,,9,25,8.2,,,6.2,2,,Alphaproteobacteria,Bacteria,,Parry 1989,1989
rubrum_Pearce_2006,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,4.2,25,8.0,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,,Pearce 2006,2006
rubrum_Satagopan_2014,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,4.3,,,125,,,143,,,13,,,30,8,6.14,2,,Alphaproteobacteria,Bacteria,pKa from Iniguez et al. 2021,Satagopan 2014,2014
rubrum_Schloss_1982,Rhodospirillum,rubrum,S-1,FALSE,,TRUE,FALSE,7.2198,25,7.8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,,Schloss 1982,1982
rubrum_schulz_2022,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,6.31,,,116,,,,,,12.6,,8.1,25,8,6.25,2,,Alphaproteobacteria,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
rubrum_M330L_Terzaghi_1986,Rhodospirillum,rubrum,,TRUE,M330L,TRUE,E. coli,,,,2.35E+03,,,6000,,,7.7,,,30,8,6.33,2,,Alphaproteobacteria,Bacteria,S taken at 2 mM RuBP,Terzaghi 1986,1986
rubrum_Terzaghi_1986,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,,,,159,,,167,,,7.2,,,30,8,6.33,2,,Alphaproteobacteria,Bacteria,S taken at 2 mM RuBP,Terzaghi 1986,1986
rubrum_tsai_2025,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,12.3,,,130,,,,,,12.5,,8.3,25,8,6.25,2,,Alphaproteobacteria,Bacteria,2 pKa model used,Tsai 2025,2025
rubrum_davidi_2020_corrected,Rhodospirillum,rubrum,,FALSE,,TRUE,E. coli,11,,,109,,,,,,101,,8.3,25,8,6.25,2,,Alphaproteobacteria,Bacteria,Corrected values from Davidi 2020; 2 pKa model used,Tsai 2025,2025
rhodovulum_mb263_davidi_2020,Rhodovulum,sp,MB263,FALSE,,TRUE,E. coli,7.9,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_080615823.1,Davidi 2020,2020
rhodovulum_p5_davidi_2020,Rhodovulum,sp,P5,FALSE,,TRUE,E. coli,7.5,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_081534969.1,Davidi 2020,2020
rhodovulum_mb263_de_pins_2025,Rhodovulum,sp,MB263,FALSE,,FALSE,E. coli,18.7370560528789,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_080615823.1,de Pins 2025,2025
rhodovulum_de_pins_2025,Rhodovulum,sp,P5,FALSE,,FALSE,E. coli,16.820766229289,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_081534969.1,de Pins 2025,2025
sulfidophilum_de_pins_2025,Rhodovulum,sulfidophilum,,FALSE,,TRUE,E. coli,8.72976475190951,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_042462841.1,de Pins 2025,2025
robiginitomaculum_de_pins_2024,Robiginitomaculum,sp,,FALSE,,TRUE,E. coli,5.3,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Metagenome,Accession number PHS23106.1,de Pins 2024,2024
robiginitomaculum_de_pins_2025,Robiginitomaculum,sp,,FALSE,,FALSE,E. coli,11.4977389415393,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Metagenome,Accession number PHS23106.1,de Pins 2025,2025
parvum_davidi_2020,Roseospirillum,parvum,,FALSE,,TRUE,E. coli,3.2,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_092620206.1,Davidi 2020,2020
parvum_de_pins_2025,Roseospirillum,parvum,,FALSE,,FALSE,E. coli,12.7752654905992,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_092620206.1,de Pins 2025,2025
acetosella_Yeoh_1981,Rumex,acetosella,,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
acetosella_Yeoh_1981_alpine,Rumex,acetosella,alpine,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
cirrhosa_capó-bauçà_2022a,Ruppia,cirrhosa,,FALSE,,TRUE,FALSE,3.27,,,17.8,,,642.1,,,84,,,25,8.1,6.12,1B,canon,Aquatic plants,Plants,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022a,2022
ruthia_3_davidi_2020,Ruthia,magnifica,,FALSE,,TRUE,E. coli,5.8,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Spectroscopic; accession number TARA_102.SAMEA2622197.480.0.22-3_1360909_4,Davidi 2020,2020
magnifica_de_pins_2025,Ruthia,magnifica,,FALSE,,FALSE,E. coli,14.9044764056991,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Accession number TARA_102.SAMEA2622197.480.0.22-3_1360909_4,de Pins 2025,2025
latissima_Iñiguez_2019,Saccharina,latissima,,FALSE,,TRUE,FALSE,1.79,,,19.4,,,,,,,,,25,8.1,6.11,1D,canon,Macroalgae,Algae,,Iñiguez 2019,2019
officinarum_Hermida-Carrera_2016,Saccharum,officinarum,hybrid S. officinarum x Saccharum spontaneum,FALSE,,TRUE,FALSE,3.9,,8.0,26.3,,8.0,1256,,,82.2,,,25,8.2,6.11,1B,canon,C4 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
flava_Galmés_2014b,Sarracenia,flava,,FALSE,,TRUE,FALSE,4.4,,,12.6,,,426,,,,,,25,8,6.12,1B,canon,Carnivorous plants,Plants,no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
wallichii_sakata_2024,Schima,wallichii,mertensiana,FALSE,,TRUE,FALSE,,,,,,,,,,76.3,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
cereale_Ishikawa_2009,Secale,cereale,,FALSE,,TRUE,FALSE,1.65,,,,,,,,,,,,28,8.2,na,1B,canon,C3 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
cereale_Prins_2016,Secale,cereale,Agronom,FALSE,,TRUE,FALSE,3.23,,,20.2,,,472,,,91.5,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
cereale_Yeoh_1980,Secale,cereale,,FALSE,,TRUE,FALSE,,,,13,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
selenatireducens_davidi_2020,Sedimenticola,selenatireducens,,FALSE,,TRUE,E. coli,6.2,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_029132057.1,Davidi 2020,2020
selenatireducens_de_pins_2025,Sedimenticola,selenatireducens,,FALSE,,FALSE,E. coli,13.8398709481492,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_029132057.1,de Pins 2025,2025
qiaohouensis_davidi_2020,Sediminimonas,qiaohouensis,,FALSE,,TRUE,E. coli,4.6,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_026756535.1,Davidi 2020,2020
qiaohouensis_de_pins_2025,Sediminimonas,qiaohouensis,,FALSE,,FALSE,E. coli,9.36852802643947,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_026756535.1,de Pins 2025,2025
kraussiana_Yeoh_1981,Selaginella,kraussiana,,FALSE,,TRUE,FALSE,,,,18,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
viridis_Boyd_2015,Setaria,viridis,,FALSE,,TRUE,FALSE,5.44,,,31.22,,,359,,,58.41,,,25,7.7,na,1B,canon,C4 plants,Plants,kcatC is the only thing reported directly; calculated in Iniguez et al. 2019,Boyd 2015,2015
viridis_Ishikawa_2009,Setaria,viridis,,FALSE,,TRUE,FALSE,2.17,,,,,,,,,,,,28,8.2,na,1B,canon,C4 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
italica_Jordan_1983,Setaria,italica,,FALSE,,TRUE,FALSE,,,,32.1,,,,,,58,,,25,8.3,6.23,1B,canon,C4 plants,Plants,Table 1,Jordan 1983,1983
viridis_Sharwood_2016b,Setaria,viridis,,FALSE,,TRUE,FALSE,5.9,,,18.1,,,619,,,72.7,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
geniculata_Yeoh_1980,Setaria,geniculata,,FALSE,,TRUE,FALSE,,,,51,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
cretica_Galmés_2014b,Sideritis,cretica,spicata,FALSE,,TRUE,FALSE,2,,,7.8,,,328,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from environments with high osmotic and heat stress; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
lacisalsi_de_pins_2024,Sinisalibacter,lacisalsi,,FALSE,,TRUE,E. coli,7.0,30,8,,,,,,,,,,,,na,1Ac,,Alphaproteobacteria,Bacteria,Accession number WP_188528096.1,de Pins 2024,2024
lacisalsi_de_pins_2025,Sinisalibacter,lacisalsi,,FALSE,,FALSE,E. coli,15.1173974972091,30,8,,,,,,,,,,,,na,1Ac,,Alphaproteobacteria,Bacteria,Accession number WP_188528096.1,de Pins 2025,2025
costatum_Boller_2015,Skeletonema,costatum,,FALSE,,TRUE,FALSE,,,,48.9,25,7.5,,,,,,,,,6.08,1D,canon,Diatoms,Algae,Vmax not included because they don't quantify Rubisco; calculated pKa individually for each vial so I'm not sure a correction can be made.,Boller 2015,2015
costatum_Haslam_2005,Skeletonema,costatum,,FALSE,,TRUE,FALSE,,,,,,,,,,72,25,8.2,,,6.2,1D,canon,Diatoms,Algae,References Parry 1989 for S measurement,Haslam 2005,2005
marinoi_Valegård_2018,Skeletonema,marinoi,,FALSE,,TRUE,FALSE,4.665,,,48,,,1810,,,96,,8.1,25,8.2,6.11,1D,canon,Diatoms,Algae,pH from Carmo-Silva et al. 2010,Valegård 2018,2018
marinoi_Young_2016,Skeletonema,marinoi,CCMP1332,FALSE,,TRUE,FALSE,3.2,,,68,,,883,,,,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
macrantha_hermida-carrera_2020,Sobralia,macrantha,,FALSE,,TRUE,FALSE,2.5,,,12.1,,,,,,,,,25,8,6.23,1B,canon,C3 plants,Plants,,Hermida-Carrera 2020,2020
lycopersicum_Hermida-Carrera_2016,Solanum,lycopersicum,Roma VF,FALSE,,TRUE,FALSE,2.3,,8.0,9.7,,8.0,363,,,92.4,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
tuberosum_Hermida-Carrera_2016,Solanum,tuberosum,Erlanger,FALSE,,TRUE,FALSE,2,,8.0,9.6,,8.0,295,,,95.4,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
lycopersicum_Jordan_1983,Solanum,lycopersicum,,FALSE,,TRUE,FALSE,,,,8.2,,,,,,82,,,25,8.3,6.23,1B,canon,C3 plants,Plants,Table 1,Jordan 1983,1983
tuberosum_Sage_2002b,Solanum,tuberosum,,FALSE,,TRUE,FALSE,3.76,28,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sage 2002b,2002
tuberosum_Yeoh_1981,Solanum,tuberosum,,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
bicolor_Ishikawa_2009,Sorghum,bicolor,,FALSE,,TRUE,FALSE,3.5,,,25.6,,,,,,,,,28,8.2,nf,1B,canon,C4 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
bicolor_Ishikawa_2011,Sorghum,bicolor,,FALSE,,TRUE,FALSE,4.09,,,41.5,,,,,,,,,28,8.2,nf,1B,canon,C4 plants,Plants,Cite Ishikawa 2009 for methods,Ishikawa 2011,2011
bicolor_ito_2024,Sorghum,bicolor,,FALSE,,TRUE,FALSE,2.5,25,8,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ito 2024,2024
bicolor_Jordan_1983,Sorghum,bicolor,,FALSE,,TRUE,FALSE,,,,29.8,,,,,,70,,,25,8.3,6.23,1B,canon,C4 plants,Plants,Table 1,Jordan 1983,1983
bicolor_Seemann_1984,Sorghum,bicolor,,FALSE,,TRUE,FALSE,7.56,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
bicolor_Sharwood_2016a,Sorghum,bicolor,,FALSE,,TRUE,FALSE,5.8,,,22.9,,,,,,,,,25,8,nf,1B,canon,C4 plants,Plants,No methods; just cite 2008 paper,Sharwood 2016a,2016
sorghum_vulgare_Yeoh_1980,Sorghum,vulgare,,FALSE,,TRUE,FALSE,,,,50,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
stenocarpa_Orr_2016,Sphenostylis,stenocarpa,,FALSE,,TRUE,FALSE,2.8,,,17.4,,,574,,,93.6,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there.,Orr 2016,2016
oleracea_Andrews_&_Lorimer_1985,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,,,,,,,105,25,8.52,,,6.12,1B,canon,C3 plants,Plants,Figure 3,Andrews & Lorimer 1985,1985
oleracea_Badger_1974,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,17.5,,,195,,,,,,25,8.3,6.37,1B,canon,C3 plants,Plants,pH from Badger & Andrews 1974,Badger 1974,1974
oleracea_Griffiths_2008,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,13.6,,8.2,,,,94.7,,8.3,25,,6.37,1B,canon,C3 plants,Plants,S doesn't need pKa (used gas method),Griffiths 2008,2008
oleracea_Hermida-Carrera_2016,Spinacia,oleracea,Butterfly,FALSE,,TRUE,FALSE,2.4,,8.0,14.1,,8.0,284,,,97,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
oleracea_Iñiguez_2021,Spinacia,oleracea,,FALSE,,FALSE,FALSE,1.9,,,11.9,,,479,,,87.2,,,25,na,na,1B,canon,C3 plants,Plants,methodology-corrected average from Iñiguez et al. 2021 across multiple cultivats,Iñiguez 2021,2021
oleracea_ito_2024,Spinacia,oleracea,,FALSE,,TRUE,FALSE,1.75,25,8,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Ito 2024,2024
oleracea_Jordan_1981,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,14,,,480,,,80,,,25,8.3,6.23,1B,canon,C3 plants,Plants,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
oleracea_1_Jordan_1984,Spinacia,oleracea,,FALSE,,TRUE,FALSE,1.719,,,11,,,500,,,88,,8.2,25,8.35,6.23,1B,canon,C3 plants,Plants,Table 2; Sc/o determined with a different method so that pKa adjustment was not necessary; kcat converted from Vc with factor of 1.146,Jordan 1984,1984
oleracea_2_Jordan_1984,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,,,,,,,83,25,8.2,,,6.23,1B,canon,C3 plants,Plants,Table 3,Jordan 1984,1984
oleracea_3_Jordan_1984,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,,,,,,,81,25,8.2,,,na,1B,canon,C3 plants,Plants,Table 3; Sc/o determined with gas method so pKa adjustment was not necessary,Jordan 1984,1984
oleracea_Kane_1994,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,,,,,,,82.1,25,8.3,,,na,1B,canon,C3 plants,Plants,CO2/O2 gas mix added in presence of bovine CA; no pKa needed,Kane 1994,1994
oleracea_Kent_and_Tomany_1984,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,,,,,,,74,25,7.9,,,nf,1B,canon,C3 plants,Plants,,Kent and Tomany 1984,1984
oleracea_Kubien_2008,Spinacia,oleracea,,FALSE,,TRUE,FALSE,3.2,,,12.1,,,574,,,79.8,,8.3,25,8.1,6.25,1B,canon,C3 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
oleracea_Lee_G.J._1993,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,,,,,,,78,25,8,,,6.15,1B,canon,C3 plants,Plants,,Lee G.J. 1993,1993
oleracea_Makino_1985,Spinacia,oleracea,,FALSE,,TRUE,FALSE,3.088,,,10.9,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,kcat reported as specific activity,Makino 1985,1985
oleracea_Read_1994,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,,,,,,,77.2,25,8,,,6.12,1B,canon,C3 plants,Plants,,Read 1994,1994
oleracea_Seemann_1984,Spinacia,oleracea,,FALSE,,TRUE,FALSE,4.24,30,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
oleracea_sugawara_2025,Spinacia,oleracea,,FALSE,,TRUE,FALSE,1.72,25,8,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sugawara 2025,2025
oleracea_Uemura_1996,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,,,,,,,93.8,25,8.3,,,na,1B,canon,C3 plants,Plants,methods paper on measuring S,Uemura 1996,1996
oleracea_Uemura_1997,Spinacia,oleracea,,FALSE,,TRUE,FALSE,2.6,,,14.3,,,,,,93.8,,,25,8,6.08,1B,canon,C3 plants,Plants,,Uemura 1997,1997
oleracea_Yamori_2006,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,,,,,,,94.9,25,8,,,nf,1B,canon,C3 plants,Plants,S calculated from fit equation reported in Fig 4 legend. Raw data not given as far as I can tell,Yamori 2006,2006
oleracea_Yeoh_1981,Spinacia,oleracea,,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
oleracea_Zhu_1998,Spinacia,oleracea,,FALSE,,TRUE,FALSE,2.7,,,11,,,520,,,92,,,25,8,6.23,1B,canon,C3 plants,Plants,"Very light on details, pH could be wrong for kcat",Zhu 1998,1998
hirsutus_Yeoh_1980,Spinifex,hirsutus,,FALSE,,TRUE,FALSE,,,,34,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
bicknellii_Galmés_2005,Spiroceratium,bicknellii,,FALSE,,TRUE,FALSE,,,,,,,,,,92.2,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
spirogyra_goudet_2020,Spirogyra,sp,,FALSE,,TRUE,FALSE,4.9,,,49.1,,,,,,,,,25,8.2,6.11,1B,canon,Green algae,Algae,,Goudet 2020,2020
africanus_Seemann_1984,Sporobolus,africanus,,FALSE,,TRUE,FALSE,6.88,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
virginicus_Yeoh_1980,Sporobolus,virginicus,,FALSE,,TRUE,FALSE,,,,41,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
laxum_Sharwood_2016b,Steinchisma,laxum,,FALSE,,TRUE,FALSE,2.3,,,7.7,,,419,,,91.4,,,25,8.16,6.25,1B,canon,C3 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
stipa_mollis_Yeoh_1980,Stipa,mollis,,FALSE,,TRUE,FALSE,,,,20,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
pectinata_capó-bauçà_2022a,Stuckenia,pectinata,,FALSE,,TRUE,FALSE,3.17,,,25,,,748.3,,,81.6,,,25,8.1,6.12,1B,canon,Aquatic plants,Plants,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022a,2022
acuminata_Rosnow_2015,Suaeda,acuminata,,FALSE,,TRUE,FALSE,2.95,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Rosnow 2015,2015
altisima_Rosnow_2015,Suaeda,altisima,,FALSE,,TRUE,FALSE,3.19,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Rosnow 2015,2015
aralocaspica_Rosnow_2015,Suaeda,aralocaspica,,FALSE,,TRUE,FALSE,3.77,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Rosnow 2015,2015
eltonica_Rosnow_2015,Suaeda,eltonica,,FALSE,,TRUE,FALSE,3.34,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Rosnow 2015,2015
fruticosa_Rosnow_2015,Suaeda,fruticosa,,FALSE,,TRUE,FALSE,4.23,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Rosnow 2015,2015
linearis_Rosnow_2015,Suaeda,linearis,,FALSE,,TRUE,FALSE,1.77,25,8.0,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Rosnow 2015,2015
linifolia_Rosnow_2015,Suaeda,linifolia,,FALSE,,TRUE,FALSE,2.08,25,8.0,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Rosnow 2015,2015
nigra_Rosnow_2015,Suaeda,nigra,,FALSE,,TRUE,FALSE,3.76,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Rosnow 2015,2015
physophora_Rosnow_2015,Suaeda,physophora,,FALSE,,TRUE,FALSE,1.52,25,8.0,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Rosnow 2015,2015
vera_Rosnow_2015,Suaeda,vera,,FALSE,,TRUE,FALSE,1.82,25,8.0,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Rosnow 2015,2015
sulfuricella_davidi_2020,Sulfuricella,sp,T08,FALSE,,TRUE,E. coli,5,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Spectroscopic; accession number WP_059417771.1,Davidi 2020,2020
sulfuricella_de_pins_2025,Sulfuricella,sp,T08,FALSE,,FALSE,E. coli,12.5623443990893,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number WP_059417771.1,de Pins 2025,2025
nivalis_de_pins_2024,Sulfuriferula,nivalis,,FALSE,,TRUE,E. coli,6.5,30,8,,,,,,,,,,,,na,1Ac,,Betaproteobacteria,Bacteria,Accession number WP_162085967.1,de Pins 2024,2024
nivalis_de_pins_2025,Sulfuriferula,nivalis,,FALSE,,FALSE,E. coli,14.0527920396592,30,8,,,,,,,,,,,,na,1Ac,,Betaproteobacteria,Bacteria,Accession number WP_162085967.1,de Pins 2025,2025
caldicuralii_de_pins_2025,Sulfurivirga,caldicuralii,,FALSE,,FALSE,E. coli,23.2083989745887,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_074200542.1,de Pins 2025,2025
caldicuralii_tsai_2025,Sulfurivirga,caldicuralii,,FALSE,,TRUE,E. coli,21.4,,,161,,,,,,13.5,,8.3,25,8,6.25,2,,Gammaproteobacteria,Bacteria,2 pKa model used; accession number WP_074200542.1,Tsai 2025,2025
caldicuralii_davidi_2020_corrected,Sulfurivirga,caldicuralii,,FALSE,,TRUE,E. coli,23.2,,,143,,,,,,144,,8.3,25,8,6.25,2,,Gammaproteobacteria,Bacteria,Corrected values from Davidi 2020; 2 pKa model used; accession number WP_074200542.1,Tsai 2025,2025
symbiodinium_1_davidi_2020,Symbiodinium,sp,,FALSE,,TRUE,E. coli,5.9,30,8,,,,,,,,,,,,na,2,,Dinoflagellates,Algae,Spectroscopic; accession number AAG37859.1,Davidi 2020,2020
symbiodinium_2_davidi_2020,Symbiodinium,sp,,FALSE,,TRUE,E. coli,5.3,30,8,,,,,,,,,,,,na,2,,Dinoflagellates,Algae,Spectroscopic; accession number Q41407.1,Davidi 2020,2020
symbiodinium_de_pins_2025,Symbiodinium,sp,,FALSE,,FALSE,E. coli,13.2011076736192,30,8,,,,,,,,,,,,na,2,,Dinoflagellates,Algae,Accession number AAG37859.1,de Pins 2025,2025
synechococcus_aguiló-nicolau_2023,Synechococcus,sp,PCC 6301,FALSE,,TRUE,FALSE,8.7,,,147.2,,,631.6,,,48.2,,8.3,25,8.1,6.11,1Bc,canon,Cyanobacteria,Bacteria,Kane method for Sc/o so no pKa needed,Aguiló-Nicolau 2023,2023
elongatus_Bainbridge_1998,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,7.2,,,124.3,,,,,,46.3,,,25,8.2,6.12,1Bc,canon,Cyanobacteria,Bacteria,pKa only applies for Kc,Bainbridge 1998,1998
elongatus_K128R_Bainbridge_1998,Synechococcus,elongatus,6301,TRUE,K128R,TRUE,E. coli,2.9,,,86.4,,,,,,42.5,,,25,8.2,6.12,1Bc,canon,Cyanobacteria,Bacteria,pKa only applies for Kc,Bainbridge 1998,1998
elongatus_K128G_Bainbridge_1998,Synechococcus,elongatus,6301,TRUE,K128G,TRUE,E. coli,0.15,,,204.5,,,,,,38.3,,,25,8.2,6.12,1Bc,canon,Cyanobacteria,Bacteria,pKa only applies for Kc,Bainbridge 1998,1998
elongatus_K128Q_Bainbridge_1998,Synechococcus,elongatus,6301,TRUE,K128Q,TRUE,E. coli,0.23,,,204.4,,,,,,6.7,,,25,8.2,6.12,1Bc,canon,Cyanobacteria,Bacteria,pKa only applies for Kc,Bainbridge 1998,1998
elongatus_K128H_Bainbridge_1998,Synechococcus,elongatus,6301,TRUE,K128H,TRUE,E. coli,0.22,,,215.5,,,,,,6.1,,,25,8.2,6.12,1Bc,canon,Cyanobacteria,Bacteria,pKa only applies for Kc,Bainbridge 1998,1998
elongatus_K128D_Bainbridge_1998,Synechococcus,elongatus,6301,TRUE,K128D,TRUE,E. coli,0.13,,,109.6,,,,,,5.1,,,25,8.2,6.12,1Bc,canon,Cyanobacteria,Bacteria,pKa only applies for Kc,Bainbridge 1998,1998
synechococcus_banda_2020,Synechococcus,sp,PCC 6301,FALSE,,TRUE,E. coli,14.3,,,235,,,983,,,56.1,,8.2,25,8,6.11,1Bc,canon,Cyanobacteria,Bacteria,,Banda 2020,2020
synechococcus_bsa11s_de_pins_2024,Synechococcus,sp,BSA11S,FALSE,,TRUE,E. coli,10.5,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_185465331.1,de Pins 2024,2024
elongatus_11801_de_pins_2024,Synechococcus,elongatus,PCC 11801,FALSE,,TRUE,E. coli,7.9,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number AZB73040.1,de Pins 2024,2024
synechococcus_bs56d_de_pins_2024,Synechococcus,sp,BS56D,FALSE,,TRUE,E. coli,13.1,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_131454437.1,de Pins 2024,2024
elongatus_6301_de_pins_2024,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,10.6,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_011242444.1,de Pins 2024,2024
synechococcus_pcc 7336_de_pins_2024,Synechococcus,sp,PCC 7336,FALSE,,TRUE,E. coli,7.1,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_017327366.1,de Pins 2024,2024
lacustris_de_pins_2024,Synechococcus,lacustris,str. Tous,FALSE,,TRUE,E. coli,10.2,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number OON11896.1,de Pins 2024,2024
synechococcus_a15-127_de_pins_2024,Synechococcus,sp,A15-127,FALSE,,TRUE,E. coli,9.0,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_186485071.1,de Pins 2024,2024
synechococcus_gfb01_de_pins_2024,Synechococcus,sp,GFB01,FALSE,,TRUE,E. coli,6.4,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_048018084.1,de Pins 2024,2024
synechococcus_rsccf101_de_pins_2024,Synechococcus,sp,RSCCF101,FALSE,,TRUE,E. coli,11.0,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_150882264.1,de Pins 2024,2024
synechococcus_bs56d_de_pins_2025,Synechococcus,sp,BS56D,FALSE,,FALSE,E. coli,28.3185051708284,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_131454437.1,de Pins 2025,2025
synechococcus_rsccf101_de_pins_2025,Synechococcus,sp,RSCCF101,FALSE,,FALSE,E. coli,23.8471622491186,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_150882264.1,de Pins 2025,2025
s_elongatus_6301_de_pins_2025,Synechococcus,elongatus,6301,FALSE,,FALSE,E. coli,22.9954778830787,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_011242444.1,de Pins 2025,2025
synechococcus_bsa11s_de_pins_2025,Synechococcus,sp,BSA11S,FALSE,,FALSE,E. coli,22.5696357000587,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_185465331.1,de Pins 2025,2025
lacustris_de_pins_2025,Synechococcus,lacustris,str. Tous,FALSE,,FALSE,E. coli,21.9308724255287,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number OON11896.1,de Pins 2025,2025
synechococcus_a15-127_de_pins_2025,Synechococcus,sp,A15-127,FALSE,,FALSE,E. coli,19.3758193274089,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_186485071.1,de Pins 2025,2025
s_elongatus_11801_de_pins_2025,Synechococcus,elongatus,PCC 11801,FALSE,,FALSE,E. coli,17.033687320799,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number AZB73040.1,de Pins 2025,2025
synechococcus_pcc 7336_de_pins_2025,Synechococcus,sp,PCC 7336,FALSE,,FALSE,E. coli,15.3303185887191,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_017327366.1,de Pins 2025,2025
synechococcus_gfb01_de_pins_2025,Synechococcus,sp,GFB01,FALSE,,FALSE,E. coli,13.8398709481492,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_048018084.1,de Pins 2025,2025
elongatus_Greene_2007,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,11.4,,,273,,,,,,43.9,,8.3,25,8,nf,1Bc,canon,Cyanobacteria,Bacteria,,Greene 2007,2007
elongatus_M259T/F342S_Greene_2007,Synechococcus,elongatus,6301,TRUE,M259T/F342S,TRUE,E. coli,10,,,207,,,,,,38.4,,8.3,25,8,nf,1Bc,canon,Cyanobacteria,Bacteria,,Greene 2007,2007
elongatus_A8S/M259T_Greene_2007,Synechococcus,elongatus,6301,TRUE,A8S/M259T,TRUE,E. coli,11.4,,,216,,,,,,40.5,,8.3,25,8,nf,1Bc,canon,Cyanobacteria,Bacteria,,Greene 2007,2007
elongatus_M259T_Greene_2007,Synechococcus,elongatus,6301,TRUE,M259T,TRUE,E. coli,12.8,,,237,,,,,,42.8,,8.3,25,8,nf,1Bc,canon,Cyanobacteria,Bacteria,,Greene 2007,2007
elongatus_Gutteridge_1986,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,,,,,,,,,,52,25,8.2,,,6.2,1Bc,canon,Cyanobacteria,Bacteria,"pKa, pH, T from Parry paper describing electrode assay",Gutteridge 1986,1986
elongatus_Horken_and_Tabita_1998,Synechococcus,elongatus,6301,FALSE,,TRUE,FALSE,2.7,,,173,,,,,,38.5,25,8,30,7.6,nf,1Bc,canon,Cyanobacteria,Bacteria,,Horken and Tabita 1998,1998
synechococcus_sp_Iñiguez_2021,Synechococcus,sp,,FALSE,,FALSE,FALSE,7,,,139.6,,,690,,,43.9,,,25,na,na,1B,canon,Cyanobacteria,Bacteria,methodology-corrected average from Iñiguez et al. 2021 across multiple strains,Iñiguez 2021,2021
elongatus_Kane_1994,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,,,,,,,,,,42.5,25,8.3,,,na,1Bc,canon,Cyanobacteria,Bacteria,CO2/O2 gas mix added in presence of bovine CA; no pKa needed,Kane 1994,1994
elongatus__Kane_1994,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,,,,,,,,,,44.8,25,8.3,,,na,1Bc,canon,Cyanobacteria,Bacteria,CO2/O2 gas mix added in presence of bovine CA; no pKa needed,Kane 1994,1994
elongatus_Lee_G.J._1993,Synechococcus,elongatus,6301,FALSE,,TRUE,FALSE,,,,,,,,,,40,25,8,,,6.15,1Bc,canon,Cyanobacteria,Bacteria,,Lee G.J. 1993,1993
elongatus_Morell_1994,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,11.6,,,284,,,,,,43,,,25,7.8,6.37,1Bc,canon,Cyanobacteria,Bacteria,"Cites Andrews 1988 for kcat & KM methods, Kane 1994 for S measurement method; assumed pKa 6.37 for Kc (but S doesn't use pKa!)",Morell 1994,1994
elongatus_T65A_Morell_1994,Synechococcus,elongatus,6301,TRUE,T65A,TRUE,E. coli,0.3,,,484,,,,,,21.6,,,25,7.8,6.37,1Bc,canon,Cyanobacteria,Bacteria,"Cites Andrews 1988 for kcat & KM methods, Kane 1994 for S measurement method; assumed pKa 6.37 for Kc (but S doesn't use pKa!)",Morell 1994,1994
elongatus_T65S_Morell_1994,Synechococcus,elongatus,6301,TRUE,T65S,TRUE,E. coli,1.82,,,620,,,,,,36.6,,,25,7.8,6.37,1Bc,canon,Cyanobacteria,Bacteria,"Cites Andrews 1988 for kcat & KM methods, Kane 1994 for S measurement method; assumed pKa 6.37 for Kc (but S doesn't use pKa!)",Morell 1994,1994
elongatus_T65V_Morell_1994,Synechococcus,elongatus,6301,TRUE,T65V,TRUE,E. coli,0.091,,,633,,,,,,18.5,,,25,7.8,6.37,1Bc,canon,Cyanobacteria,Bacteria,"Cites Andrews 1988 for kcat & KM methods, Kane 1994 for S measurement method; assumed pKa 6.37 for Kc (but S doesn't use pKa!)",Morell 1994,1994
elongatus_Mueller-Cajar_2008,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,11.8,,,200,,,199,,,41.5,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2008,2008
elongatus_A272G_Mueller-Cajar_2008,Synechococcus,elongatus,6301,TRUE,A272G,TRUE,E. coli,9.7,,,244,,,,,,40.2,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2008,2008
elongatus_F341I_Mueller-Cajar_2008,Synechococcus,elongatus,6301,TRUE,F341I,TRUE,E. coli,10.1,,,208,,,180,,,36.6,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2008,2008
elongatus_F341L_Mueller-Cajar_2008,Synechococcus,elongatus,6301,TRUE,F341L,TRUE,E. coli,9.8,,,245,,,489,,,40,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2008,2008
elongatus_I174V_Mueller-Cajar_2008,Synechococcus,elongatus,6301,TRUE,I174V,TRUE,E. coli,10.2,,,233,,,240,,,42.9,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2008,2008
elongatus_K339R_Mueller-Cajar_2008,Synechococcus,elongatus,6301,TRUE,K339R,TRUE,E. coli,10.1,,,148,,,,,,43,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2008,2008
elongatus_L348M_Mueller-Cajar_2008,Synechococcus,elongatus,6301,TRUE,L348M,TRUE,E. coli,11.3,,,287,,,,,,35.1,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2008,2008
elongatus_N115S_Mueller-Cajar_2008,Synechococcus,elongatus,6301,TRUE,N115S,TRUE,E. coli,9,,,191,,,,,,43.5,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2008,2008
elongatus_Q212L_Mueller-Cajar_2008,Synechococcus,elongatus,6301,TRUE,Q212L,TRUE,E. coli,9.9,,,370,,,472,,,37.4,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,"Used Kane method for S so no pKa correction needed; no pKa listed for Kc, but cites Whitney & Sharwood 2007; Whitney & Sharwood 2007 does not report pKa, but Iniguez et al. 2021 cites a pKa of 6.25 for that study",Mueller-Cajar 2008,2008
elongatus_Parry_1989,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,,,,,,,,,,52,25,8.2,,,6.2,1Bc,canon,Cyanobacteria,Bacteria,,Parry 1989,1989
elongatus_Paul_1991,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,11.8,,,251,,,,,,,,,25,7.8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Paul 1991,1991
elongatus_T14A_Paul_1991,Synechococcus,elongatus,6301,TRUE,T14A,TRUE,E. coli,11.5,,,280,,,,,,,,,25,7.8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Paul 1991,1991
elongatus_T14V_Paul_1991,Synechococcus,elongatus,6301,TRUE,T14V,TRUE,E. coli,11.3,,,226,,,,,,,,,25,7.8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Paul 1991,1991
elongatus_T14G_Paul_1991,Synechococcus,elongatus,6301,TRUE,T14G,TRUE,E. coli,6,,,207,,,,,,,,,25,7.8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Paul 1991,1991
elongatus_T14D_Paul_1991,Synechococcus,elongatus,6301,TRUE,T14D,TRUE,E. coli,4.9,,,240,,,,,,,,,25,7.8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Paul 1991,1991
elongatus_Y17C_Paul_1991,Synechococcus,elongatus,6301,TRUE,Y17C,TRUE,E. coli,6.7,,,273,,,,,,,,,25,7.8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Paul 1991,1991
elongatus_Pearce_2006,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,13.9,25,8.0,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,,Pearce 2006,2006
elongatus_Read_1992a,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,,,,175,,,565,,,40.8,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Read 1992a,1992
elongatus_F92L_Read_1992a,Synechococcus,elongatus,6301,TRUE,F92L,TRUE,E. coli,,,,66,,,468,,,44.6,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Read 1992a,1992
elongatus_G91V_Read_1992a,Synechococcus,elongatus,6301,TRUE,G91V,TRUE,E. coli,,,,84,,,294,,,41,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Read 1992a,1992
elongatus_187V_Read_1992a,Synechococcus,elongatus,6301,TRUE,187V,TRUE,E. coli,,,,123,,,474,,,39.5,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Read 1992a,1992
elongatus_R88K_Read_1992a,Synechococcus,elongatus,6301,TRUE,R88K,TRUE,E. coli,,,,154,,,1080,,,38.5,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Read 1992a,1992
elongatus_Read_1992b,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,2.57,,,142,,,664,,,41,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,kcat value is suspect here. unclear how they quantitated protein. it's OK since we have other measurements of this rubisco,Read 1992b,1992
"elongatus_L_euk_S_hybrid,_pANOLI_Read_1992b",Synechococcus,elongatus,6301,TRUE,"L euk S hybrid, pANOLI",TRUE,E. coli,0.05,,,179,,,1437,,,37.4,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,SSU from O. luteus,Read 1992b,1992
"elongatus_L_euk_S_hybrid,_pVTAC223_Read_1992b",Synechococcus,elongatus,6301,TRUE,"L euk S hybrid, pVTAC223",TRUE,E. coli,0.13,,,85,,,1878,,,64.9,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,SSU from Cylindrotheca N1,Read 1992b,1992
elongatus_Read_1994,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,3.71,,,167,,,529,,,41,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,kcat value is suspect here. unclear how they quantitated protein. it's OK since we have other measurements of this rubisco,Read 1994,1994
elongatus_A340L_Read_1994,Synechococcus,elongatus,6301,TRUE,A340L,TRUE,E. coli,2.34,,,185,,,629,,,36.4,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Read 1994,1994
elongatus_K339P_Read_1994,Synechococcus,elongatus,6301,TRUE,K339P,TRUE,E. coli,0.54,,,264,,,721,,,38,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Read 1994,1994
elongatus_S341M_Read_1994,Synechococcus,elongatus,6301,TRUE,S341M,TRUE,E. coli,3.47,,,155,,,1430,,,42,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Read 1994,1994
elongatus_T342I_Read_1994,Synechococcus,elongatus,6301,TRUE,T342I,TRUE,E. coli,1.95,,,169,,,446,,,31.9,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Read 1994,1994
elongatus_T342V_Read_1994,Synechococcus,elongatus,6301,TRUE,T342V,TRUE,E. coli,1.83,,,111,,,364,,,29.8,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Read 1994,1994
elongatus_schulz_2022,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,,,,,,,,,,45.7,,8.1,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,2 pKa model; Kane method for Sc/o so no pKa needed,Schulz 2022,2022
elongatus_Shih_2016,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,9.78,,,152,,,1230,,,50.3,,,25,8,6.11,1Bc,canon,Cyanobacteria,Bacteria,pKa from Iniguez et al. 2021,Shih 2016,2016
elongatus_tsai_2025,Synechococcus,elongatus,PCC 6301,FALSE,,TRUE,E. coli,14.2,,,156,,,,,,42.7,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,2 pKa model used,Tsai 2025,2025
elongatus_davidi_2020_corrected,Synechococcus,elongatus,PCC 6301,FALSE,,TRUE,E. coli,16.4,,,130,,,,,,162,,8.3,25,8,6.25,1Bc,canon,Cyanobacteria,Bacteria,Corrected values from Davidi 2020; 2 pKa model used,Tsai 2025,2025
elongatus_Wang_2001,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,,,,117,,,,,,5.1,,,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Wang 2001,2001
elongatus_Whitehead_2014,Synechococcus,elongatus,6301,FALSE,,TRUE,FALSE,14.4,,,169.2,,,,,,,,,25,8,6.251,1Bc,canon,Cyanobacteria,Bacteria,Cite Whitney & Sharwood 2007 for methods,Whitehead 2014,2014
elongatus_Whitney_and_Sharwood_2007,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,6.1,,,240,,,,,,40.6,,8.3,25,8,6.251,1Bc,canon,Cyanobacteria,Bacteria,,Whitney and Sharwood 2007,2007
elongatus_S20L_Whitney_and_Sharwood_2007,Synechococcus,elongatus,6301,TRUE,S20L,TRUE,E. coli,6.1,,,,,,,,,42.6,,8.3,25,8,6.251,1Bc,canon,Cyanobacteria,Bacteria,,Whitney and Sharwood 2007,2007
elongatus_S40L_Whitney_and_Sharwood_2007,Synechococcus,elongatus,6301,TRUE,S40L,TRUE,E. coli,6.1,,,214,,,,,,42,,8.3,25,8,6.251,1Bc,canon,Cyanobacteria,Bacteria,,Whitney and Sharwood 2007,2007
elongatus_S60L_Whitney_and_Sharwood_2007,Synechococcus,elongatus,6301,TRUE,S60L,TRUE,E. coli,6.3,,,207,,,,,,41.9,,8.3,25,8,6.251,1Bc,canon,Cyanobacteria,Bacteria,,Whitney and Sharwood 2007,2007
elongatus_S60LS_Whitney_and_Sharwood_2007,Synechococcus,elongatus,6301,TRUE,S60LS,TRUE,E. coli,6.8,,,,,,,,,41.5,,8.3,25,8,6.251,1Bc,canon,Cyanobacteria,Bacteria,,Whitney and Sharwood 2007,2007
elongatus_S60H4LS_Whitney_and_Sharwood_2007,Synechococcus,elongatus,6301,TRUE,S60H4LS,TRUE,E. coli,6.6,,,,,,,,,40,,8.3,25,8,6.251,1Bc,canon,Cyanobacteria,Bacteria,,Whitney and Sharwood 2007,2007
elongatus_S40LH6_Whitney_and_Sharwood_2007,Synechococcus,elongatus,6301,TRUE,S40LH6,TRUE,E. coli,1.8,,,341,,,,,,40.2,,8.3,25,8,6.251,1Bc,canon,Cyanobacteria,Bacteria,,Whitney and Sharwood 2007,2007
elongatus_L40S_Whitney_and_Sharwood_2007,Synechococcus,elongatus,6301,TRUE,L40S,TRUE,E. coli,1.5,,,388,,,,,,40.5,,8.3,25,8,6.251,1Bc,canon,Cyanobacteria,Bacteria,,Whitney and Sharwood 2007,2007
elongatus_F140I_Wilson_2017,Synechococcus,elongatus,6301,TRUE,F140I,TRUE,E. coli,11.1,,8.1,,,,,,,46,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,two pKa model,Wilson 2017,2017
elongatus_F341I_Wilson_2017,Synechococcus,elongatus,6301,TRUE,F341I,TRUE,E. coli,10.3,,8.1,,,,,,,41.8,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,two pKa model,Wilson 2017,2017
elongatus_V186I_Wilson_2017,Synechococcus,elongatus,6301,TRUE,V186I,TRUE,E. coli,10.6,,8.1,,,,,,,39.3,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,two pKa model,Wilson 2017,2017
elongatus_Witte_2010,Synechococcus,elongatus,6301,FALSE,,TRUE,R. capsulatus,2.7,,,,,,,,,36.8,,,23,8,nf,1Bc,canon,Cyanobacteria,Bacteria,,Witte 2010,2010
synechococcus_zhang_2021,Synechococcus,sp,PCC 7002,FALSE,,TRUE,E. coli,12.3,,,194.6,,,,,,,,,25,nf,nf,1Bc,canon,Cyanobacteria,Bacteria,couldn’t find pKa or pH information,Zhang 2021,2021
elongatus_Zhu_1998,Synechococcus,elongatus,6301,FALSE,,TRUE,E. coli,6.6,,,81,,,460,,,47,,,25,8,6.23,1Bc,canon,Cyanobacteria,Bacteria,"In Galmes et al., species is 'lividus', but based on the protein sequence & date, it's actually elongatus PCC6301. In primary source 'wildtype.' Very light on details, pH could be wrong for kcat",Zhu 1998,1998
elongatus_DK_Zhu_1998,Synechococcus,elongatus,6301,TRUE,DK,TRUE,E. coli,4.1,,,119,,,1330,,,49,,,25,8,6.23,1Bc,canon,Cyanobacteria,Bacteria,"C-terminus extension DK; Very light on details, pH could be wrong for kcat",Zhu 1998,1998
elongatus_LT_Zhu_1998,Synechococcus,elongatus,6301,TRUE,LT,TRUE,E. coli,2.8,,,208,,,2140,,,44,,,25,8,6.23,1Bc,canon,Cyanobacteria,Bacteria,"G. sulphuraria C-terminus; Very light on details, pH could be wrong for kcat",Zhu 1998,1998
synechocystis_CS-94_Andrews_&_Lorimer_1985,Synechocystis,sp,CS-94,FALSE,,TRUE,FALSE,11.6,,,185,,,,,,67,,8.5,25,7.8,6.12,1Bc,canon,Cyanobacteria,Bacteria,vC calculated total activity in ref assuming all sites activated - this is probably not true. Specificity from Fig. 3,Andrews & Lorimer 1985,1985
synechocystis_de_pins_2024,Synechocystis,sp,,FALSE,,TRUE,E. coli,5.0,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_010873418.1,de Pins 2024,2024
synechocystis_de_pins_2025,Synechocystis,sp,,FALSE,,FALSE,E. coli,10.8589756670093,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_010873418.1,de Pins 2025,2025
vulgaris_Kent_and_Tomany_1995,Syringa,vulgaris,,FALSE,,TRUE,FALSE,,,,,,,,,,90.3,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
cleyerifolium_sakata_2024,Syzygium,cleyerifolium,,FALSE,,TRUE,FALSE,,,,,,,,,,115.6,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
cuspidata_sugawara_2025,Taxus,cuspidata,,FALSE,,TRUE,FALSE,1.52,25,8,,,,,,,,,,,,na,1B,canon,"Gymnosperms, Ferns, and Lycopods",Plants,,Sugawara 2025,2025
candida_Orr_2016,Tephrosia,candida,,FALSE,,TRUE,FALSE,2.2,,,15.9,,,481,,,97.8,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
purpurea_Orr_2016,Tephrosia,purpurea,,FALSE,,TRUE,FALSE,2.2,,,12.4,,,333,,,103,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
rhodesica_Orr_2016,Tephrosia,rhodesica,,FALSE,,TRUE,FALSE,2.2,,,13.7,,,565,,,91.6,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
ignava_de_pins_2024,Tepidimonas,ignava,,FALSE,,TRUE,E. coli,1.4,30,8,,,,,,,,,,,,na,1Ac,,Betaproteobacteria,Bacteria,Accession number WP_132961271.1,de Pins 2024,2024
ignava_de_pins_2025,Tepidimonas,ignava,,FALSE,,FALSE,E. coli,2.98089528113983,30,8,,,,,,,,,,,,na,1Ac,,Betaproteobacteria,Bacteria,Accession number WP_132961271.1,de Pins 2025,2025
tessaracoccus_davidi_2020,Tessaracoccus,sp,,FALSE,,TRUE,E. coli,7,30,8,,,,,,,,,,,,na,2,,Actinomycetes,Bacteria,Spectroscopic; accession number WP_068749566.1,Davidi 2020,2020
tessaracoccus_de_pins_2025,Tessaracoccus,sp,,FALSE,,FALSE,E. coli,18.5241349613689,30,8,,,,,,,,,,,,na,2,,Actinomycetes,Bacteria,Accession number WP_068749566.1,de Pins 2025,2025
obliquus_Jordan_1981,Tetradesmus,obliquus,,FALSE,,TRUE,FALSE,,,,38,,,660,,,63,,,25,8.3,6.23,1B,canon,Green algae,Algae,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
tetragonioides_Jordan_1981,Tetragonia,tetragonioides,,FALSE,,TRUE,FALSE,,,,13,,,600,,,81,,,25,8.3,6.23,1B,canon,C3 plants,Plants,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
juncea_Yeoh_1980,Tetrarrhena,juncea,,FALSE,,TRUE,FALSE,,,,20,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
heterophyllum_Galmés_2014b,Teucrium,heterophyllum,,FALSE,,TRUE,FALSE,2.7,,,6.7,,,359,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from environments with high osmotic and heat stress; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
antarctica_Haslam_2005,Thalassiosira,antarctica,,FALSE,,TRUE,FALSE,,,,,,,,,,90,25,8.2,,,6.2,1D,canon,Diatoms,Algae,References Parry 1989 for S measurement,Haslam 2005,2005
hyalina_Haslam_2005,Thalassiosira,hyalina,,FALSE,,TRUE,FALSE,,,,,,,,,,97,25,8.2,,,6.2,1D,canon,Diatoms,Algae,References Parry 1989 for S measurement,Haslam 2005,2005
antarctica_Valegård_2018,Thalassiosira,antarctica,,FALSE,,TRUE,FALSE,3.725,,,93,,,1740,,,,,,25,8.2,6.11,1D,canon,Diatoms,Algae,pH from Carmo-Silva et al. 2010,Valegård 2018,2018
hyalina_Valegård_2018,Thalassiosira,hyalina,,FALSE,,TRUE,FALSE,4.101,,,50,,,1640,,,99,,8.1,25,8.2,6.11,1D,canon,Diatoms,Algae,pH from Carmo-Silva et al. 2010,Valegård 2018,2018
nordenskioeldii_Valegård_2018,Thalassiosira,nordenskioeldii,,FALSE,,TRUE,FALSE,4.658,,,122,,,1420,,,82,,8.1,25,8.2,6.11,1D,canon,Diatoms,Algae,pH from Carmo-Silva et al. 2010,Valegård 2018,2018
oceanica_Young_2016,Thalassiosira,oceanica,CS-427,FALSE,,TRUE,FALSE,2.4,,,65,,,954,,,80,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
weissflogii_Young_2016,Thalassiosira,weissflogii,CCMP1336,FALSE,,TRUE,FALSE,3.2,,,65,,,2030,,,79,,,25,8,6.25,1D,canon,Diatoms,Algae,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
gelatinovora_davidi_2020,Thalassovita,gelatinovora,,FALSE,,TRUE,E. coli,5.2,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_058261992.1,Davidi 2020,2020
gelatinovora_de_pins_2025,Thalassovita,gelatinovora,,FALSE,,FALSE,E. coli,11.7106600330493,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_058261992.1,de Pins 2025,2025
themeda_australis_Yeoh_1980,Themeda,australis,,FALSE,,TRUE,FALSE,,,,45,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
kodakarensis_Ezaki_1999,Thermococcus,kodakarensis,KOD1,FALSE,,TRUE,E. coli,0.450378,25,8.3,,,,,,,,,,,,nf,3,alt,Archaea,Archaea,They don't cite anything for pKa,Ezaki 1999,1999
kodakarensis_Kreel_2015,Thermococcus,kodakarensis,,FALSE,,TRUE,E. coli,16.6,,,79,,,43,,,6,,,83,8.3,nf,3,alt,Archaea,Archaea,"Points to Kreel & Tabita 2007, but no pKa given there either. KC determined anaerobically",Kreel 2015,2015
kodakarensis_SP3_Yoshida_2007,Thermococcus,kodakarensis,,TRUE,SP3,TRUE,E. coli,0.23,,,74,,,280,,,18,,,25,8.3,nf,3,alt,Archaea,Archaea,,Yoshida 2007,2007
kodakarensis_SP4_Yoshida_2007,Thermococcus,kodakarensis,,TRUE,SP4,TRUE,E. coli,0.25,,,50,,,300,,,11,,,25,8.3,nf,3,alt,Archaea,Archaea,,Yoshida 2007,2007
kodakarensis_SP4/N333F_Yoshida_2007,Thermococcus,kodakarensis,,TRUE,SP4/N333F,TRUE,E. coli,0.47,,,78,,,190,,,6,,,25,8.3,nf,3,alt,Archaea,Archaea,,Yoshida 2007,2007
kodakarensis_SP6_Yoshida_2007,Thermococcus,kodakarensis,,TRUE,SP6,TRUE,E. coli,0.33,,,59,,,460,,,11,,,25,8.3,nf,3,alt,Archaea,Archaea,,Yoshida 2007,2007
kodakarensis_Yoshida_2007,Thermococcus,kodakarensis,,FALSE,,TRUE,E. coli,0.25,,,52.3,,,900,,,11,,,25,8.3,nf,3,alt,Archaea,Archaea,,Yoshida 2007,2007
thermopetrobacter_davidi_2020,Thermopetrobacter,sp,TC1,FALSE,,TRUE,E. coli,6,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Spectroscopic; accession number WP_038036007.1,Davidi 2020,2020
thermopetrobacter_de_pins_2025,Thermopetrobacter,sp,TC1,FALSE,,FALSE,E. coli,12.3494233075793,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_038036007.1,de Pins 2025,2025
vestitus_de_pins_2024,Thermosynechococcus,vestitus,,FALSE,,TRUE,E. coli,5.7,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_011057346.1,de Pins 2024,2024
thermosynechococcus_de_pins_2024,Thermosynechococcus,sp,M98_K2018_005,FALSE,,TRUE,E. coli,5.2,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number HIK35429.1,de Pins 2024,2024
t_elongatus_de_pins_2025,Thermosynechococcus,elongatus,,FALSE,,FALSE,E. coli,12.1365022160693,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_011057346.1,de Pins 2025,2025
thermosynechococcus_de_pins_2025,Thermosynechococcus,sp,M98_K2018_005,FALSE,,FALSE,E. coli,11.2848178500293,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number HIK35429.1,de Pins 2025,2025
elongatus_Gubernator_2008,Thermosynechococcus,vestitus,,FALSE,,TRUE,E. coli,2.65,,,54.3,,,841,,,82.1,,8.2,25,8,6.12,1Bc,canon,Cyanobacteria,Bacteria,,Gubernator 2008,2008
vulcanus_Iwaki_2008,Thermosynechococcus,vulcanus,,FALSE,,TRUE,E. coli,,,,,,,,,,46.8,25,7.6,,,na,1Bc,canon,Cyanobacteria,Bacteria,,Iwaki 2008,2008
elongatus_Occhialini_2015,Thermosynechococcus,vestitus,7942,FALSE,,TRUE,Tobacco,14.4,,,172,,,585,,,43,,,25,8.1,nf,1Bc,canon,Cyanobacteria,Bacteria,"Heterologously expressed in Tobacco. Also data in the paper where rbcX is co-expressed - about the same. Only cites CO2 concentration, not pKa used for calculation. I think it's impossible to determine it from what's given in the paper.",Occhialini 2015,2015
elongatus_Uemura_1996,Thermosynechococcus,vestitus,7942,FALSE,,TRUE,E. coli,,,,,,,,,,45.2,25,8.3,,,na,1Bc,canon,Cyanobacteria,Bacteria,methods paper on measuring S,Uemura 1996,1996
elongatus_A398T/P451A_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,A398T/P451A,TRUE,E. coli,6.4,,8.1,,,,,,,50.5,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_A398T/P451A/ssuA48V_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,A398T/P451A/ssuA48V,TRUE,E. coli,8.1,,8.1,,,,,,,45.5,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_A414T/P451A_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,A414T/P451A,TRUE,E. coli,8,,8.1,,,,,,,55.8,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_F345I_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,F345I,TRUE,E. coli,4.8,,8.1,,,,,,,48,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_F345I/P451A_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,F345I/P451A,TRUE,E. coli,4.8,,8.1,,,,,,,49.2,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_I393M/P451A_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,I393M/P451A,TRUE,E. coli,7.8,,8.1,,,,,,,48.1,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_L74M/D397N/P451A_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,L74M/D397N/P451A,TRUE,E. coli,8.2,,8.1,,,,,,,55.4,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_P451A_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,P451A,TRUE,E. coli,6.9,,8.1,,,,,,,52.6,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_P451A/ssuA48V_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,P451A/ssuA48V,TRUE,E. coli,8.8,,8.1,,,,,,,48,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_P451A/ssuH37L_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,P451A/ssuH37L,TRUE,E. coli,8.4,,8.1,,,,,,,49.7,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_P451A/ssuV98M_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,P451A/ssuV98M,TRUE,E. coli,9.5,,8.1,,,,,,,56.3,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_P451A/ssuY36N/G112D_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,P451A/ssuY36N/G112D,TRUE,E. coli,9.3,,8.1,,,,,,,47.7,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_P451A/ssuY36N/R51H_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,P451A/ssuY36N/R51H,TRUE,E. coli,8,,8.1,,,,,,,51.8,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
elongatus_V300A_Wilson_2017,Thermosynechococcus,vestitus,,TRUE,V300A,TRUE,E. coli,6.6,,8.1,,,,,,,51.9,,8.1,25,,6.25,1Bc,canon,Cyanobacteria,Bacteria,"two pKa model, kcat at pH 8.05, S at pH 8.1",Wilson 2017,2017
paradoxus_de_pins_2024,Thioalkalivibrio,paradoxus,,FALSE,,TRUE,E. coli,7.5,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_006748372.1,de Pins 2024,2024
paradoxus_de_pins_2025,Thioalkalivibrio,paradoxus,,FALSE,,FALSE,E. coli,16.182002954759,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_006748372.1,de Pins 2025,2025
thiobacillus_davidi_2020,Thiobacillus,sp,SCN 63-57,FALSE,,TRUE,E. coli,7.3,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Spectroscopic; accession number ODV03949.1,Davidi 2020,2020
thiobacillus_de_pins_2024,Thiobacillus,sp,65-1059,FALSE,,TRUE,E. coli,1.1,30,8,,,,,,,,,,,,na,1Aq,,Betaproteobacteria,Metagenome,Accession number OJW41584.1,de Pins 2024,2024
thiobacillus_scn 63-57_de_pins_2025,Thiobacillus,sp,SCN 63-57,FALSE,,FALSE,E. coli,19.8016615104288,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number ODV03949.1,de Pins 2025,2025
thiobacillus_de_pins_2025,Thiobacillus,sp,65-1059,FALSE,,FALSE,E. coli,2.34213200660986,30,8,,,,,,,,,,,,na,1Aq,,Betaproteobacteria,Metagenome,Accession number OJW41584.1,de Pins 2025,2025
denitrificans_2_Hernandez_1996,Thiobacillus,denitrificans,,FALSE,,TRUE,R. sphaeroides,3.5,,,256,,,619,,,13.3,,,25,8,6.12,2,,Betaproteobacteria,Bacteria,"Points to read & tabita 1992 for methods. Calculated S from reported values, which is slightly different than reported S of 14",Hernandez 1996,1996
denitrificans_Iaq_Hernandez_1996,Thiobacillus,denitrificans,,FALSE,,TRUE,R. sphaeroides,1.9,,,138,,,1640,,,42.7,,,25,8,6.12,1Aq,,Betaproteobacteria,Bacteria,"Points to read & tabita 1992 for methods. Calculated S from values, which is slightly different than reported 46",Hernandez 1996,1996
roseopersicina_Purohit_1979,Thiocapsa,roseopersicina,Lascelles,FALSE,,TRUE,FALSE,,,,180,30,8.1,,,,,,,,,6.39,1Ac,,Gammaproteobacteria,Bacteria,Don't actually report any numbers for kcat; assuming IAc because carboxysome genes found,Purohit 1979,1979
endolucinida_davidi_2020,Thiodiazotropha,endolucinida,,FALSE,,TRUE,E. coli,3.8,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_069126921.1,Davidi 2020,2020
endolucinida_de_pins_2025,Thiodiazotropha,endolucinida,,FALSE,,FALSE,E. coli,8.51684366039952,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_069126921.1,de Pins 2025,2025
thioglobus_de_pins_2024,Thioglobus,sp,,FALSE,,TRUE,E. coli,4.9,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Metagenome,Accession number MAJ75541.1,de Pins 2024,2024
thioglobus_de_pins_2025,Thioglobus,sp,,FALSE,,FALSE,E. coli,10.6460545754994,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Metagenome,Accession number MAJ75541.1,de Pins 2025,2025
denitrificans_davidi_2020,Thiohalomonas,denitrificans,,FALSE,,TRUE,E. coli,5.4,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_092996737.1,Davidi 2020,2020
thiohalomonas_denitrificans_de_pins_2025,Thiohalomonas,denitrificans,,FALSE,,FALSE,E. coli,12.1365022160693,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_092996737.1,de Pins 2025,2025
denitrificans_de_pins_2024,Thiohalorhabdus,denitrificans,,FALSE,,TRUE,E. coli,3.8,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Bacteria,Accession number WP_054967076.1,de Pins 2024,2024
denitrificans_1Aq_de_pins_2025,Thiohalorhabdus,denitrificans,,FALSE,,FALSE,E. coli,8.09100147737954,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Bacteria,Accession number WP_054967076.1,de Pins 2025,2025
denitrificans_2_de_pins_2025,Thiohalorhabdus,denitrificans,,FALSE,,FALSE,E. coli,7.45223820284958,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_054966967.1,de Pins 2025,2025
halophila_de_pins_2024,Thiohalospira,halophila,,FALSE,,TRUE,E. coli,7.8,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_093428253.1,de Pins 2024,2024
halophila_de_pins_2025,Thiohalospira,halophila,,FALSE,,FALSE,E. coli,17.033687320799,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_093428253.1,de Pins 2025,2025
brandeum_davidi_2020,Thiolapillus,brandeum,,FALSE,,TRUE,E. coli,8.8,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_041067559.1,Davidi 2020,2020
brandeum_de_pins_2025,Thiolapillus,brandeum,,FALSE,,FALSE,E. coli,20.6533458764688,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_041067559.1,de Pins 2025,2025
disciformis_davidi_2020,Thiolinea,disciformis,,FALSE,,TRUE,E. coli,8.2,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_020395078.1,Davidi 2020,2020
disciformis_de_pins_2025,Thiolinea,disciformis,,FALSE,,FALSE,E. coli,18.5241349613689,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_020395078.1,de Pins 2025,2025
nelsonii_davidi_2020,Thiomargarita,nelsonii,,FALSE,,TRUE,E. coli,4.8,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Spectroscopic; accession number KHD09267.1,Davidi 2020,2020
nelsonii_de_pins_2025,Thiomargarita,nelsonii,,FALSE,,FALSE,E. coli,11.9235811245593,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Accession number KHD09267.1,de Pins 2025,2025
arctica_davidi_2020,Thiomicrorhabdus,arctica,,FALSE,,TRUE,E. coli,1.7,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_019557147.1,Davidi 2020,2020
aquaedulcis_de_pins_2025,Thiomicrorhabdus,aquaedulcis,,FALSE,,TRUE,E. coli,26.8280575302585,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_127470167.1,de Pins 2025,2025
indica_de_pins_2025,Thiomicrorhabdus,indica,,FALSE,,TRUE,E. coli,20.6533458764688,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_130537058.1,de Pins 2025,2025
thiomicrorhabdus_de_pins_2025,Thiomicrorhabdus,sp,Milos-T2,FALSE,,TRUE,E. coli,17.672450595329,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_029406688.1,de Pins 2025,2025
frisia_de_pins_2025,Thiomicrorhabdus,frisia,Kp2,FALSE,,TRUE,E. coli,17.246608412309,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_040726535.1,de Pins 2025,2025
thiomicrospira_davidi_2020,Thiomicrospira,sp,CG_Thiomicrospira_01,FALSE,,TRUE,E. coli,5.3,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Spectroscopic; accession number cg_0.2_sub100_scaffold_14_c_35,Davidi 2020,2020
pelophila_davidi_2020,Thiomicrospira,pelophila,,FALSE,,TRUE,E. coli,1.4,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_029933650.1,Davidi 2020,2020
thiomicrospira_xs5_de_pins_2025,Thiomicrospira,sp,XS5,FALSE,,TRUE,E. coli,19.3758193274089,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_068647475.1,de Pins 2025,2025
thiomicrospira_de_pins_2025,Thiomicrospira,sp,CG_Thiomicrospira_01,FALSE,,FALSE,E. coli,11.9235811245593,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Accession number cg_0.2_sub100_scaffold_14_c_35,de Pins 2025,2025
pelophila_de_pins_2025,Thiomicrospira,pelophila,,FALSE,,FALSE,E. coli,7.23931711133959,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_029933650.1,de Pins 2025,2025
thiomonas_davidi_2020,Thiomonas,sp,CB2,FALSE,,TRUE,E. coli,6.8,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Spectroscopic; accession number CDW95835.1,Davidi 2020,2020
thiomonas_de_pins_2025,Thiomonas,sp,CB2,FALSE,,FALSE,E. coli,15.7561607717391,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number CDW95835.1,de Pins 2025,2025
intermedia_Purohit_1976,Thiomonas,intermedia,,FALSE,,TRUE,FALSE,3.16296,30,8.0,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,kcat reported as specific activity; has both IA & II but quaternary structure reported in paper does not have small subunit,Purohit 1976,1976
drewsii_de_pins_2024,Thiorhodococcus,drewsii,,FALSE,,TRUE,E. coli,6.5,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_007042721.1,de Pins 2024,2024
drewsii_de_pins_2025,Thiorhodococcus,drewsii,,FALSE,,FALSE,E. coli,14.0527920396592,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_007042721.1,de Pins 2025,2025
frisius_davidi_2020,Thiorhodovibrio,frisius,,FALSE,,TRUE,E. coli,5,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Spectroscopic; accession number WP_009149320.1,Davidi 2020,2020
frisius_de_pins_2025,Thiorhodovibrio,frisius,,FALSE,,FALSE,E. coli,13.6269498566392,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Bacteria,Accession number WP_009149320.1,de Pins 2025,2025
sediminis_de_pins_2024,Thiosulfatimonas,sediminis,,FALSE,,TRUE,E. coli,10.7,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_173269803.1,de Pins 2024,2024
sediminis_de_pins_2025,Thiosulfatimonas,sediminis,,FALSE,,FALSE,E. coli,23.2083989745887,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Bacteria,Accession number WP_173269803.1,de Pins 2025,2025
biflora_hermida-carrera_2020,Tillandsia,biflora,,FALSE,,TRUE,FALSE,2.3,,,9.6,,,,,,,,,25,8,6.23,1B,canon,C3 plants,Plants,,Hermida-Carrera 2020,2020
multicaulis_hermida-carrera_2020,Tillandsia,multicaulis,,FALSE,,TRUE,FALSE,3.2,,,11.8,,,,,,,,,25,8,6.23,1B,canon,C3 plants,Plants,,Hermida-Carrera 2020,2020
bermejoensis_hermida-carrera_2020,Tillandsia,bermejoensis,,FALSE,,TRUE,FALSE,5.7,,,23.1,,,,,,,,,25,8,6.23,1B,canon,CAM plants,Plants,,Hermida-Carrera 2020,2020
lutea_Heureux_2017,Tisochrysis,lutea,,FALSE,,TRUE,FALSE,2.2,,,24.1,,,800,,,89,,,25,8.16,6.251,1D,canon,Haptophytes,Algae,"Methods same as Sharwood 2016 - assuming pH reported there for 25 C. Uses 2 pKa model, not clear if correction should apply",Heureux 2017,2017
fortunei_Galmés_2014b,Trachycarpus,fortunei,,FALSE,,TRUE,FALSE,2.8,,,9,,,364,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from low stress environments; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
orientalis_sakata_2024,Trema,orientalis,,FALSE,,TRUE,FALSE,,,,,,,,,,81.8,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
variabilis_de_pins_2024,Trichormus,variabilis,ATCC 29413,FALSE,,TRUE,E. coli,6.1,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_011320601.1,de Pins 2024,2024
variabilis_de_pins_2025,Trichormus,variabilis,ATCC 29413,FALSE,,FALSE,E. coli,13.2011076736192,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_011320601.1,de Pins 2025,2025
subterraneum_Delgado_1993,Trifolium,subterraneum,,FALSE,,TRUE,FALSE,,,,,,,,,,96.5,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Delgado 1993,1995
repens_Lehnherr_1985,Trifolium,repens,native ecotype,FALSE,,TRUE,FALSE,,,,20.8,,,619,,,,,,25,8.23,6.21,1B,canon,C3 plants,Plants,,Lehnherr 1985,1985
maritima_capó-bauçà_2022a,Triglochin,maritima,,FALSE,,TRUE,FALSE,2.19,,,7.2,,,414.2,,,79.3,,,25,8.1,6.12,1B,canon,Aquatic plants,Plants,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022a,2022
triraphis_mollis_Yeoh_1980,Triraphis,mollis,,FALSE,,TRUE,FALSE,,,,39,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
Cando_Prins_2016,Triticale,Cando,,FALSE,,TRUE,FALSE,3.62,,,16.1,,,384,,,99.7,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
Rotego_Prins_2016,Triticale,Rotego,,FALSE,,TRUE,FALSE,3.46,,,15.1,,,369,,,96.8,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
Talentro_Prins_2016,Triticale,Talentro,,FALSE,,TRUE,FALSE,3.36,,,15.8,,,436,,,95.2,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
aestivum_Carmo-Silva_2010,Triticum,aestivum,,FALSE,,TRUE,FALSE,3,,,10.9,,,341,,,100,,,25,8.2,6.11,1B,canon,C3 plants,Plants,,Carmo-Silva 2010,2010
aestivum_Galmés_2014b,Triticum,aestivum,Alexandria,FALSE,,TRUE,FALSE,4,,,10.3,,,414,,,,,,25,8,6.12,1B,canon,C3 plants,Plants,C3 plants from low stress environments; no pKa reported but cite Bird 1982 which cites McNeil 1981 which uses 6.12,Galmés 2014b,2014
aestivum_Hermida-Carrera_2016,Triticum,aestivum,Cajeme,FALSE,,TRUE,FALSE,2.2,,8.0,11.3,,8.0,620,,,100,,,25,8.2,6.11,1B,canon,C3 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
aestivum_hermida-carrera_2020,Triticum,aestivum,cv. Cajeme,FALSE,,TRUE,FALSE,1.9,,,10.3,,,,,,,,,25,8,6.23,1B,canon,C3 plants,Plants,,Hermida-Carrera 2020,2020
aestivum_Iñiguez_2021,Triticum,aestivum,,FALSE,,FALSE,FALSE,2.7,,,11.9,,,429,,,96.3,,,25,na,na,1B,canon,C3 plants,Plants,methodology-corrected average from Iñiguez et al. 2021 across multiple cultivars,Iñiguez 2021,2021
aestivum_ito_2024,Triticum,aestivum,,FALSE,,TRUE,FALSE,1.51,25,8,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Ito 2024,2024
aestivum_Kane_1994,Triticum,aestivum,,FALSE,,TRUE,FALSE,,,,,,,,,,89.9,25,8.3,,,na,1B,canon,C3 plants,Plants,CO2/O2 gas mix added in presence of bovine CA; no pKa needed,Kane 1994,1994
aestivum_Makino_1985,Triticum,aestivum,,FALSE,,TRUE,FALSE,2.919,,,10.3,,,,,,,,,25,8,6.11,1B,canon,C3 plants,Plants,kcat reported as specific activity,Makino 1985,1985
aestivum_Makino_1988,Triticum,aestivum,,FALSE,,TRUE,FALSE,2.964,,,11.2,,,383,,,119.9,,,25,8.15,6.12,1B,canon,C3 plants,Plants,S calculated from Vo given,Makino 1988,1988
aestivum_Orr_2016,Triticum,aestivum,,FALSE,,TRUE,FALSE,4.9,,,20.1,,,658,,,100,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
boeoticum_Orr_2016,Triticum,boeoticum,,FALSE,,TRUE,FALSE,3.8,,,19.7,,,905,,,96,,8.2,25,8,6.11,1B,canon,C3 plants,Plants,"Points to Prins JExpB 2016 for methods. Extracted pH and pKa from there. S measured at pH 8.2, rest measured at 8.0. Not sure why. ",Orr 2016,2016
aestivum_Parry_1989,Triticum,aestivum,Maris Mardler,FALSE,,TRUE,FALSE,,,,,,,,,,107,25,8.2,,,6.2,1B,canon,C3 plants,Plants,,Parry 1989,1989
aestivum_C_Prins_2016,Triticum,aestivum,C,FALSE,,TRUE,FALSE,3.57,,,16,,,402,,,100,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
aestivum_SATYN_II_9410_Prins_2016,Triticum,aestivum,SATYN_II_9410,FALSE,,TRUE,FALSE,3.26,,,17.6,,,469,,,93.8,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
aestivum_SATYN_II_9440_Prins_2016,Triticum,aestivum,SATYN_II_9440,FALSE,,TRUE,FALSE,3.33,,,17.9,,,465,,,96.2,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
aestivum_SATYN_II_9428_Prins_2016,Triticum,aestivum,SATYN_II_9428,FALSE,,TRUE,FALSE,3.64,,,15.7,,,379,,,92.9,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
dicoccon_ENT_2129_Prins_2016,Triticum,dicoccon,CI12214 (ENT:2129),FALSE,,TRUE,FALSE,3.55,,,15.4,,,399,,,94.1,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
dicoccon_ENT_2128_Prins_2016,Triticum,dicoccon,CI12214 (ENT:2128),FALSE,,TRUE,FALSE,3.57,,,13.5,,,397,,,90.9,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
dicoccon_PI355483_Prins_2016,Triticum,dicoccon,PI355483,FALSE,,TRUE,FALSE,3.36,,,16.8,,,456,,,95.2,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
dicoccon_ENT_2126_Prins_2016,Triticum,dicoccon,CI12214 (ENT:2126),FALSE,,TRUE,FALSE,3.55,,,18.6,,,485,,,93.8,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
monococcum_Prins_2016,Triticum,monococcum,,FALSE,,TRUE,FALSE,3.18,,,14,,,401,,,104,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
timonovum_Prins_2016,Triticum,timonovum,,FALSE,,TRUE,FALSE,3.48,,,16.8,,,495,,,101,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
timopheevii_Prins_2016,Triticum,timopheevii,,FALSE,,TRUE,FALSE,3.43,,,16.2,,,429,,,102,,,25,8.2,6.11,1B,canon,C3 plants,Plants,all wheat variants,Prins 2016,2016
aestivum_Seemann_1984,Triticum,aestivum,,FALSE,,TRUE,FALSE,4.47,30,8.2,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
aestivum_sugawara_2025,Triticum,aestivum,,FALSE,,TRUE,FALSE,1.44,25,8,,,,,,,,,,,,na,1B,canon,C3 plants,Plants,,Sugawara 2025,2025
aestivum_Yeoh_1980,Triticum,aestivum,,FALSE,,TRUE,FALSE,,,,15,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1980,1980
aestivum_Zhu_1998,Triticum,aestivum,,FALSE,,TRUE,FALSE,2.5,,,14,,,730,,,98,,,25,8,6.23,1B,canon,C3 plants,Plants,"Very light on details, pH could be wrong for kcat",Zhu 1998,1998
pertusa_Uemura_1996,Ulva,pertusa,,FALSE,,TRUE,FALSE,,,,,,,,,,68.5,25,8.3,,,na,1B,canon,Green algae,Algae,methods paper on measuring S,Uemura 1996,1996
ulva_sp_Yeoh_1981,Ulva,sp,,FALSE,,TRUE,FALSE,,,,70,25,8.0,,,,,,,,,6.37,1B,canon,Green algae,Algae,,Yeoh 1981,1981
unknown_1_davidi_2020,Unknown,sp,,FALSE,,TRUE,E. coli,10,30,8,,,,,,,,,,,,na,2,,Unknown,Metagenome,Spectroscopic; partial sequence according to accession number; accession number ACZ28620.1,Davidi 2020,2020
unknown_rifoxyd12_full_61_37_davidi_2020,Unknown,sp,RIFOXYD12_FULL_61_37,FALSE,,TRUE,E. coli,9.4,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Spectroscopic; accession number OGT90264.1,Davidi 2020,2020
unknown_per_gwf2_39_17_davidi_2020,Unknown,sp,PER_GWF2_39_17,FALSE,,TRUE,E. coli,8.4,30,8,,,,,,,,,,,,na,2_3,,CPR,Metagenome,Spectroscopic; accession number gwe2_scaffold_1773_6,Davidi 2020,2020
unknown_cg_gallio_01_davidi_2020,Unknown,sp,CG_Gallio_01,FALSE,,TRUE,E. coli,7.3,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Spectroscopic; accession number cg_0.2_sub10_scaffold_2396_c_6,Davidi 2020,2020
unknown_rifcsphigho2_12_full_61_11_davidi_2020,Unknown,sp,RIFCSPHIGHO2_12_FULL_61_11,FALSE,,TRUE,E. coli,7,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Spectroscopic; accession number OGA97577.1,Davidi 2020,2020
unknown_2_davidi_2020,Unknown,sp,,FALSE,,TRUE,E. coli,6.9,30,8,,,,,,,,,,,,na,2,,Unknown,Metagenome,Spectroscopic; accession number TARA_037.SAMEA2619970.600.0.22-1.6_181232_40,Davidi 2020,2020
unknown_cg2_30_65_12_davidi_2020,Unknown,sp,CG2_30_65_12,FALSE,,TRUE,E. coli,6.1,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Spectroscopic; accession number OIP83017.1,Davidi 2020,2020
unknown_gwe2_58_10_davidi_2020,Unknown,sp,GWE2_58_10,FALSE,,TRUE,E. coli,6.1,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Spectroscopic; accession number OGS93441.1,Davidi 2020,2020
unknown_cg1_02_62_390_davidi_2020,Unknown,sp,CG1_02_62_390,FALSE,,TRUE,E. coli,6,30,8,,,,,,,,,,,,na,2,,Hydrogenophilia,Metagenome,Spectroscopic; accession number OIO78882.1,Davidi 2020,2020
unknown_rifcsplowo2_12_full_61_40_davidi_2020,Unknown,sp,RIFCSPLOWO2_12_FULL_61_40,FALSE,,TRUE,E. coli,5.4,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Spectroscopic; accession number OGB30962.1,Davidi 2020,2020
unknown_4_davidi_2020,Unknown,sp,,FALSE,,TRUE,E. coli,5,30,8,,,,,,,,,,,,na,2,,Unknown,Metagenome,Spectroscopic; accession number TARA_038.SAMEA2620035.340.0.22-1.6_803280_7,Davidi 2020,2020
unknown_cg_rhodocyc_01_davidi_2020,Unknown,sp,CG_Rhodocyc_01,FALSE,,TRUE,E. coli,4.9,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Spectroscopic; accession number cg2_3.0_scaffold_261_c_14,Davidi 2020,2020
unknown_zpera2_38_36_davidi_2020,Unknown,sp,zPERA2_38_36,FALSE,,TRUE,E. coli,4.9,30,8,,,,,,,,,,,,na,2_3,,CPR,Metagenome,Spectroscopic; accession number gwc2_scaffold_145_63,Davidi 2020,2020
unknown_rifcsplowo2_02_full_58_16_davidi_2020,Unknown,sp,RIFCSPLOWO2_02_FULL_58_16,FALSE,,TRUE,E. coli,4.6,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Spectroscopic; accession number RIFCSPLOWO2_02_FULL_Rhodospirillales_58_16_rifcsplowo2_02_scaffold_186_85,Davidi 2020,2020
unknown_rbg_16_68_9_davidi_2020,Unknown,sp,RBG_16_68_9,FALSE,,TRUE,E. coli,4.5,30,8,,,,,,,,,,,,na,2,,Unknown,Metagenome,Spectroscopic; accession number OFV89986.1; listed as “Acidobacteria bacterium”,Davidi 2020,2020
unknown_5_davidi_2020,Unknown,sp,,FALSE,,TRUE,E. coli,4.3,30,8,,,,,,,,,,,,na,2,,Unknown,Metagenome,Spectroscopic; accession number ACZ28625.1,Davidi 2020,2020
unknown_brh_c57_davidi_2020,Unknown,sp,BRH_c57,FALSE,,TRUE,E. coli,3.8,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Spectroscopic; accession number KJS34037.1,Davidi 2020,2020
unknown_gwa2_60_142_davidi_2020,Unknown,sp,GWA2_60_142,FALSE,,TRUE,E. coli,3.4,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Spectroscopic; accession number OGS72457.1,Davidi 2020,2020
unknown_6_davidi_2020,Unknown,sp,,FALSE,,TRUE,E. coli,3.1,30,8,,,,,,,,,,,,na,2,,Unknown,Metagenome,Spectroscopic; accession number TARA_076.SAMEA2621242.800.0.45-0.8_959814_154,Davidi 2020,2020
unknown_cg2_30_44_17_davidi_2020,Unknown,sp,CG2_30_44_17,FALSE,,TRUE,E. coli,3.1,30,8,,,,,,,,,,,,na,2_3,,Peregrinibacteria,Metagenome,Spectroscopic; accession number OIP81853.1,Davidi 2020,2020
unknown_lp2a_davidi_2020,Unknown,sp,LP2A,FALSE,,TRUE,E. coli,2.2,30,8,,,,,,,,,,,,na,2,,Verrucomicrobiia,Metagenome,Spectroscopic; accession number WP_024807638.1,Davidi 2020,2020
unknown_7_davidi_2020,Unknown,sp,,FALSE,,TRUE,E. coli,1.2,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Spectroscopic; accession number SBW00154.1,Davidi 2020,2020
unknown_gwf2_ws6_complete_39_15_davidi_2020,Unknown,sp,GWF2_WS6_complete_39_15,FALSE,,TRUE,E. coli,0.7,30,8,,,,,,,,,,,,na,2_3,,Unknown,Metagenome,Spectroscopic; accession number gwf2_scaffold_9_343,Davidi 2020,2020
unknown_rifcsplowo2_02_full_38_8_davidi_2020,Unknown,sp,RIFCSPLOWO2_02_FULL_38_8,FALSE,,TRUE,E. coli,0.6,30,8,,,,,,,,,,,,na,2_3,,Unknown,Metagenome,Spectroscopic; accession number RIFCSPLOWO2_02_FULL_OP11_38_8_rifcsplowo2_02_scaffold_81990_5,Davidi 2020,2020
unknown_hyvt-506 hyvt-506_k145_871940_de_pins_2024,Unknown,sp,HyVt-506 HyVt-506_k145_871940,FALSE,,TRUE,E. coli,2.2,30,8,,,,,,,,,,,,na,1_Anaero,,Calditrichia,Metagenome,Accession number HFB68562.1,de Pins 2024,2024
unknown_j130 k99_112929_de_pins_2024,Unknown,sp,J130 k99_112929,FALSE,,TRUE,E. coli,1.3,30,8,,,,,,,,,,,,na,1_Anaero,,Chloroflexi,Metagenome,Accession number RME08239.1,de Pins 2024,2024
unknown_1_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,3.1,30,8,,,,,,,,,,,,na,1_Anaero,,Chloroflexi,Metagenome,Accession number RME84037.1,de Pins 2024,2024
unknown_spst-223 ga0101941_1000233_de_pins_2024,Unknown,sp,SpSt-223 Ga0101941_1000233,FALSE,,TRUE,E. coli,1.3,30,8,,,,,,,,,,,,na,1_Anaero,,Chloroflexi,Metagenome,Accession number HDX57131.1; removed from NCBI at request,de Pins 2024,2024
unknown_2_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,0.8,30,8,,,,,,,,,,,,na,1C,,Unknown,Metagenome,Accession number TARA_111.SAMEA2622478.90.0.22-3_2354994_2; taxonomy listed as “Proteobacteria”,de Pins 2024,2024
unknown_3_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,2.2,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Metagenome,Accession number HFD80931.1,de Pins 2024,2024
unknown_4_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,3.0,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Metagenome,Accession number MBE2275614.1,de Pins 2024,2024
unknown_5_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,4.7,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Metagenome,Accession number NNG14147.1,de Pins 2024,2024
unknown_cg_2015-16_32_12_de_pins_2024,Unknown,sp,CG_2015-16_32_12,FALSE,,TRUE,E. coli,8.4,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NCO76356.1,de Pins 2024,2024
unknown_6_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,2.8,30,8,,,,,,,,,,,,na,1Aq,,Betaproteobacteria,Metagenome,Accession number TSA10292.1,de Pins 2024,2024
unknown_7_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,2.5,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Metagenome,Accession number TARA_112.SAMEA2622568.696.0.22-3_4274_7,de Pins 2024,2024
unknown_8_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,4.2,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Metagenome,Accession number RMH45282.1,de Pins 2024,2024
unknown_9_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,2.9,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Metagenome,Accession number TQV62574.1,de Pins 2024,2024
unknown_bms3bbin10_de_pins_2024,Unknown,sp,BMS3Bbin10,FALSE,,TRUE,E. coli,2.0,30,8,,,,,,,,,,,,na,1Aq,,Unknown,Metagenome,Accession number GBE43454.1,de Pins 2024,2024
unknown_10_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,3.9,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Metagenome,Accession number MAF95405.1,de Pins 2024,2024
unknown_k_offshore_surface_m2_239_de_pins_2024,Unknown,sp,K_Offshore_surface_m2_239,FALSE,,TRUE,E. coli,9.7,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Metagenome,Accession number MBM5816614.1,de Pins 2024,2024
unknown_11_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,1.8,30,8,,,,,,,,,,,,na,1_Anaero,,Chloroflexi,Metagenome,Accession number NKQ36332.1,de Pins 2024,2024
unknown_12_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,1.1,30,8,,,,,,,,,,,,na,1_Anaero,,Unknown,Metagenome,Accession number RME00383.1; taxonomy listed as “Calditrichota bacterium”,de Pins 2024,2024
unknown_13_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,1.7,30,8,,,,,,,,,,,,na,1_Anaero,,Unknown,Metagenome,Accession number HHL73736.1; taxonomy listed as “Bacteriodota bacterium”,de Pins 2024,2024
unknown_14_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,3.3,30,8,,,,,,,,,,,,na,1_Anaero,,Calditrichia,Metagenome,Accession number RMG64267.1,de Pins 2024,2024
unknown_15_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,5.5,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_015187492.1,de Pins 2024,2024
unknown_cg2_30_44_21_de_pins_2024,Unknown,sp,CG2_30_44_21,FALSE,,TRUE,E. coli,4.5,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number OIP69680.1,de Pins 2024,2024
unknown_sm2_1_0_de_pins_2024,Unknown,sp,SM2_1_0,FALSE,,TRUE,E. coli,5.8,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NJK99267.1,de Pins 2024,2024
unknown_su_2_1_de_pins_2024,Unknown,sp,SU_2_1,FALSE,,TRUE,E. coli,5.8,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NJK40784.1,de Pins 2024,2024
unknown_sm2_3_2_de_pins_2024,Unknown,sp,SM2_3_2,FALSE,,TRUE,E. coli,6.3,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NJL97415.1,de Pins 2024,2024
unknown_16_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,6.9,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Metagenome,Accession number NOX28090.1,de Pins 2024,2024
unknown_17_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,9.1,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Metagenome,Accession number MCF6324877.1,de Pins 2024,2024
unknown_12-64-13_de_pins_2024,Unknown,sp,12-64-13,FALSE,,TRUE,E. coli,6.7,30,8,,,,,,,,,,,,na,1Ac,,Hydrogenophilia,Metagenome,Accession number OYW65964.1,de Pins 2024,2024
unknown_18_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,6.7,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Metagenome,Accession number CAA6823104.1,de Pins 2024,2024
unknown_20-60-12_de_pins_2024,Unknown,sp,20-60-12,FALSE,,TRUE,E. coli,5.8,30,8,,,,,,,,,,,,na,1Ac,,Alphaproteobacteria,Metagenome,Accession number OYV53977.1,de Pins 2024,2024
unknown_19_de_pins_2024,Unknown,sp,,FALSE,,TRUE,E. coli,4.6,30,8,,,,,,,,,,,,na,1Ac,,Betaproteobacteria,Metagenome,Accession number GDX61470.1,de Pins 2024,2024
unknown_cg1_02_49_23_de_pins_2025,Unknown,sp,CG1_02_49_23,FALSE,,FALSE,E. coli,27.8926629878084,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Metagenome,Accession number cg1_0.2_scaffold_945_c_30,de Pins 2025,2025
unknown_gwa2_54_124_de_pins_2025,Unknown,sp,GWA2_54_124,FALSE,,FALSE,E. coli,27.0409786217684,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number OGS68397.1,de Pins 2025,2025
unknown_1_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,26.4022153472385,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Accession number RMH14716.1,de Pins 2025,2025
unknown_cg2_30_59_37_de_pins_2025,Unknown,sp,CG2_30_59_37,FALSE,,TRUE,E. coli,24.9117677066686,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Metagenome,Accession number cg2_3.0_scaffold_355_c_23,de Pins 2025,2025
unknown_gwa2_60_142_de_pins_2025,Unknown,sp,GWA2_60_142,FALSE,,FALSE,E. coli,24.6988466151586,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number OGS72457.1,de Pins 2025,2025
unknown_cg1_02_55_237_de_pins_2025,Unknown,sp,CG1_02_55_237,FALSE,,TRUE,E. coli,24.6988466151586,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Metagenome,Accession number cg1_0.2_scaffold_26_c_31,de Pins 2025,2025
unknown_2_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,24.2730044321386,30,8,,,,,,,,,,,,na,2,,Actinomycetes,Bacteria,Accession number WP_052580230.1; formerly annotated on Actinosporangium NRRL B-3428; highest BLAST similarity is to Streptomyces,de Pins 2025,2025
unknown_rifoxyd12_full_61_37_de_pins_2025,Unknown,sp,RIFOXYD12_FULL_61_37,FALSE,,FALSE,E. coli,21.0791880594888,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Accession number OGT90264.1,de Pins 2025,2025
unknown_3_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,21.0791880594888,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Metagenome,Accession number RMH52320.1,de Pins 2025,2025
unknown_k_offshore_surface_m2_239_de_pins_2025,Unknown,sp,K_Offshore_surface_m2_239,FALSE,,FALSE,E. coli,21.0791880594888,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Metagenome,Accession number MBM5816614.1,de Pins 2025,2025
unknown_gj-e10_de_pins_2025,Unknown,sp,GJ-E10,FALSE,,FALSE,E. coli,19.8016615104288,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Bacteria,Accession number WP_045470294.1; record suppressed but highest BLAST hits are for Burkholderiales still,de Pins 2025,2025
unknown_4_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,19.8016615104288,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Metagenome,Accession number MCF6324877.1,de Pins 2025,2025
unknown_gwe2_58_10_de_pins_2025,Unknown,sp,GWE2_58_10,FALSE,,FALSE,E. coli,19.5887404189189,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number OGS93441.1,de Pins 2025,2025
unknown_5_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,18.7370560528789,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Accession number RMG30778.1,de Pins 2025,2025
unknown_cg2_30_46_52_de_pins_2025,Unknown,sp,CG2_30_46_52,FALSE,,TRUE,E. coli,18.5241349613689,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Metagenome,Accession number cg2_3.0_scaffold_31_c_72,de Pins 2025,2025
unknown_6_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,18.5241349613689,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Accession number RMG51672.1,de Pins 2025,2025
unknown_cg_2015-16_32_12_de_pins_2025,Unknown,sp,CG_2015-16_32_12,FALSE,,FALSE,E. coli,18.0982927783489,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NCO76356.1,de Pins 2025,2025
unknown_7_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,17.885371686839,30,8,,,,,,,,,,,,na,2,,Unknown,Metagenome,Partial sequence according to accession number; accession number ACZ28620.1,de Pins 2025,2025
unknown_8_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,17.885371686839,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Bacteria,Accession number WP_115472589.1; formerly Cereibacter sphaeroides but record suppressed; highest BLAST hits are still to a-proteobacteria,de Pins 2025,2025
unknown_cg_rhodocyc_01_de_pins_2025,Unknown,sp,CG_Rhodocyc_01,FALSE,,FALSE,E. coli,17.246608412309,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number cg2_3.0_scaffold_261_c_14,de Pins 2025,2025
unknown_9_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,17.246608412309,30,8,,,,,,,,,,,,na,2,,Gammaproteobacteria,Metagenome,Accession number RMG34467.1,de Pins 2025,2025
unknown_cg_gallio_01_de_pins_2025,Unknown,sp,CG_Gallio_01,FALSE,,FALSE,E. coli,16.182002954759,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number cg_0.2_sub10_scaffold_2396_c_6,de Pins 2025,2025
unknown_rifcsphigho2_12_full_61_11_de_pins_2025,Unknown,sp,RIFCSPHIGHO2_12_FULL_61_11,FALSE,,FALSE,E. coli,15.7561607717391,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number OGA97577.1,de Pins 2025,2025
unknown_10_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,15.5432396802291,30,8,,,,,,,,,,,,na,2,,Unknown,Metagenome,Accession number TARA_037.SAMEA2619970.600.0.22-1.6_181232_40,de Pins 2025,2025
unknown_35-53-114_de_pins_2025,Unknown,sp,35-53-114,FALSE,,FALSE,E. coli,14.9044764056991,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number OYY45669.1,de Pins 2025,2025
unknown_11_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,14.9044764056991,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Metagenome,Accession number NOX28090.1,de Pins 2025,2025
unknown_cg1_02_62_390_de_pins_2025,Unknown,sp,CG1_02_62_390,FALSE,,FALSE,E. coli,14.6915553141891,30,8,,,,,,,,,,,,na,2,,Hydrogenophilia,Metagenome,Accession number OIO78882.1,de Pins 2025,2025
unknown_cg2_30_65_12_de_pins_2025,Unknown,sp,CG2_30_65_12,FALSE,,FALSE,E. coli,14.6915553141891,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Accession number OIP83017.1,de Pins 2025,2025
unknown_12-64-13_de_pins_2025,Unknown,sp,12-64-13,FALSE,,FALSE,E. coli,14.4786342226791,30,8,,,,,,,,,,,,na,1Ac,,Hydrogenophilia,Metagenome,Accession number OYW65964.1,de Pins 2025,2025
unknown_12_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,14.4786342226791,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Metagenome,Accession number CAA6823104.1,de Pins 2025,2025
unknown_brhc57_de_pins_2025,Unknown,sp,BRHc57,FALSE,,FALSE,E. coli,13.8398709481492,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Accession number KJS34037.1,de Pins 2025,2025
unknown_sm2_3_2_de_pins_2025,Unknown,sp,SM2_3_2,FALSE,,FALSE,E. coli,13.6269498566392,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NJL97415.1,de Pins 2025,2025
unknown_13_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,13.6269498566392,30,8,,,,,,,,,,,,na,3,,Anaerolineae,Metagenome,Accession number MBC8333483.1,de Pins 2025,2025
unknown_rifcsplowo2_02_full_58_16_de_pins_2025,Unknown,sp,RIFCSPLOWO2_02_FULL_58_16,FALSE,,FALSE,E. coli,13.4140287651292,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Accession number RIFCSPLOWO2_02_FULL_Rhodospirillales_58_16_rifcsplowo2_02_scaffold_186_85,de Pins 2025,2025
unknown_sm2_1_0_de_pins_2025,Unknown,sp,SM2_1_0,FALSE,,FALSE,E. coli,12.5623443990893,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NJK99267.1,de Pins 2025,2025
unknown_20-60-12_de_pins_2025,Unknown,sp,20-60-12,FALSE,,FALSE,E. coli,12.5623443990893,30,8,,,,,,,,,,,,na,1Ac,,Alphaproteobacteria,Metagenome,Accession number OYV53977.1,de Pins 2025,2025
unknown_su_2_1_de_pins_2025,Unknown,sp,SU_2_1,FALSE,,FALSE,E. coli,12.3494233075793,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number NJK40784.1,de Pins 2025,2025
unknown_rifcsplowo2_12_full_61_40_de_pins_2025,Unknown,sp,RIFCSPLOWO2_12_FULL_61_40,FALSE,,FALSE,E. coli,12.1365022160693,30,8,,,,,,,,,,,,na,2,,Betaproteobacteria,Metagenome,Accession number OGB30962.1,de Pins 2025,2025
unknown_14_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,11.9235811245593,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Bacteria,Accession number WP_015187492.1,de Pins 2025,2025
unknown_15_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,11.2848178500293,30,8,,,,,,,,,,,,na,2,,Unknown,Metagenome,Accession number TARA_038.SAMEA2620035.340.0.22-1.6_803280_7,de Pins 2025,2025
unknown_zpera2_38_36_de_pins_2025,Unknown,sp,zPERA2_38_36,FALSE,,FALSE,E. coli,10.8589756670093,30,8,,,,,,,,,,,,na,2_3,,CPR,Metagenome,Accession number gwc2_scaffold_145_63,de Pins 2025,2025
unknown_16_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,10.2202123924794,30,8,,,,,,,,,,,,na,1Ac,,Gammaproteobacteria,Metagenome,Accession number NNG14147.1,de Pins 2025,2025
unknown_17_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,10.0072913009694,30,8,,,,,,,,,,,,na,1Ac,,Betaproteobacteria,Metagenome,Accession number GDX61470.1,de Pins 2025,2025
unknown_cg2_30_44_21_de_pins_2025,Unknown,sp,CG2_30_44_21,FALSE,,FALSE,E. coli,9.79437020945945,30,8,,,,,,,,,,,,na,1Bc,canon,Cyanobacteria,Metagenome,Accession number OIP69680.1,de Pins 2025,2025
unknown_18_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,9.15560693492948,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Metagenome,Accession number RMH45282.1,de Pins 2025,2025
unknown_19_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,8.51684366039952,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Metagenome,Accession number MAF95405.1,de Pins 2025,2025
unknown_cg2_30_44_17_de_pins_2025,Unknown,sp,CG2_30_44_17,FALSE,,FALSE,E. coli,7.87808038586956,30,8,,,,,,,,,,,,na,2_3,,Peregrinibacteria,Metagenome,Accession number OIP81853.1,de Pins 2025,2025
unknown_20_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,7.45223820284958,30,8,,,,,,,,,,,,na,2,,Mariprofundia,Metagenome,Accession number RME85775.1,de Pins 2025,2025
unknown_21_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,7.23931711133959,30,8,,,,,,,,,,,,na,1_Anaero,,Calditrichia,Metagenome,Accession number RMG64267.1,de Pins 2025,2025
unknown_22_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,7.0263960198296,30,8,,,,,,,,,,,,na,2,,Unknown,Metagenome,Accession number TARA_076.SAMEA2621242.800.0.45-0.8_959814_154,de Pins 2025,2025
unknown_23_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,6.81347492831962,30,8,,,,,,,,,,,,na,1_Anaero,,Chloroflexi,Metagenome,Accession number RME84037.1,de Pins 2025,2025
unknown_24_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,6.38763274529964,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Metagenome,Accession number MBE2275614.1,de Pins 2025,2025
unknown_25_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,6.38763274529964,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Metagenome,Accession number TQV62574.1,de Pins 2025,2025
unknown_26_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,5.96179056227966,30,8,,,,,,,,,,,,na,1Aq,,Betaproteobacteria,Metagenome,Accession number TSA10292.1,de Pins 2025,2025
unknown_27_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,5.96179056227966,30,8,,,,,,,,,,,,na,1’,,Chloroflexi,Metagenome,Accession number RMF04955.1,de Pins 2025,2025
unknown_28_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,5.3230272877497,30,8,,,,,,,,,,,,na,1Aq,,Alphaproteobacteria,Metagenome,Accession number TARA_112.SAMEA2622568.696.0.22-3_4274_7,de Pins 2025,2025
unknown_lp2a_de_pins_2025,Unknown,sp,LP2A,FALSE,,FALSE,E. coli,4.89718510472972,30,8,,,,,,,,,,,,na,2,,Verrucomicrobiia,Metagenome,Accession number WP_024807638.1; record suppressed but highest BLAST hit is to another Verrucomicrobiia,de Pins 2025,2025
unknown_hyvt-506 hyvt-506_k145_871940_de_pins_2025,Unknown,sp,HyVt-506 HyVt-506_k145_871940,FALSE,,FALSE,E. coli,4.68426401321973,30,8,,,,,,,,,,,,na,1_Anaero,,Calditrichia,Metagenome,Accession number HFB68562.1,de Pins 2025,2025
unknown_29_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,4.68426401321973,30,8,,,,,,,,,,,,na,1Aq,,Gammaproteobacteria,Metagenome,Accession number HFD80931.1,de Pins 2025,2025
unknown_bms3bbin10_de_pins_2025,Unknown,sp,BMS3Bbin10,FALSE,,FALSE,E. coli,4.25842183019976,30,8,,,,,,,,,,,,na,1Aq,,Unknown,Metagenome,Accession number GBE43454.1,de Pins 2025,2025
unknown_30_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,4.04550073868977,30,8,,,,,,,,,,,,na,1’,,Anaerolineae,Metagenome,Accession number HFC12553.1,de Pins 2025,2025
unknown_31_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,3.83257964717978,30,8,,,,,,,,,,,,na,1_Anaero,,Unknown,Metagenome,Accession number HHL73736.1; taxonomy listed as “Bacteriodota bacterium”,de Pins 2025,2025
unknown_32_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,3.61965855566979,30,8,,,,,,,,,,,,na,1_Anaero,,Chloroflexi,Metagenome,Accession number NKQ36332.1,de Pins 2025,2025
unknown_33_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,2.98089528113983,30,8,,,,,,,,,,,,na,2,,Alphaproteobacteria,Metagenome,Accession number SBW00154.1,de Pins 2025,2025
unknown_j130 k99_112929_de_pins_2025,Unknown,sp,J130 k99_112929,FALSE,,FALSE,E. coli,2.98089528113983,30,8,,,,,,,,,,,,na,1_Anaero,,Chloroflexi,Metagenome,Accession number RME08239.1,de Pins 2025,2025
unknown_spst-223 ga0101941_1000233_de_pins_2025,Unknown,sp,SpSt-223 Ga0101941_1000233,FALSE,,FALSE,E. coli,2.98089528113983,30,8,,,,,,,,,,,,na,1_Anaero,,Chloroflexi,Metagenome,Accession number HDX57131.1; removed from NCBI at request,de Pins 2025,2025
unknown_34_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,2.34213200660986,30,8,,,,,,,,,,,,na,1_Anaero,,Unknown,Metagenome,Accession number RME00383.1; taxonomy listed as “Calditrichota bacterium”,de Pins 2025,2025
unknown_35_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,2.34213200660986,30,8,,,,,,,,,,,,na,1’,,Unknown,Metagenome,Accession number S_2p5_S6_170907_scaffold_2631390_2|GD2017_1_S_2p5_S6_Biohub_170907_UNK|GD2017_1_S_2p5_S6_Biohub_170907,de Pins 2025,2025
unknown_36_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,1.91628982358989,30,8,,,,,,,,,,,,na,1’,,Ardenticatenia,Metagenome,Accession number MBE7528243.1; also matches a couple of Chloroflexota bacterium species,de Pins 2025,2025
unknown_37_de_pins_2025,Unknown,sp,,FALSE,,FALSE,E. coli,1.7033687320799,30,8,,,,,,,,,,,,na,1C,,Unknown,Metagenome,Accession number TARA_111.SAMEA2622478.90.0.22-3_2354994_2; taxonomy listed as “Proteobacteria”,de Pins 2025,2025
unknown_38_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,1.7033687320799,30,8,,,,,,,,,,,,na,1’,,Unknown,Metagenome,Accession number SR1_18_B1_scaffold_509483_7|SR1_18_Bp1_UNK|SR1_18_Bp1_QB3_181220,de Pins 2025,2025
unknown_39_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,1.7033687320799,30,8,,,,,,,,,,,,na,1’,,Chloroflexi,Metagenome,Accession number RMF31056.1,de Pins 2025,2025
unknown_40_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,1.7033687320799,30,8,,,,,,,,,,,,na,1’,,Unknown,Metagenome,Accession number RifSed_csp2_10ft_3_scaffold_42266_12|RifSed_csp2_10ft_3_metabat_bin_295|RifSed_csp2_10ft_3,de Pins 2025,2025
unknown_41_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,1.49044764056991,30,8,,,,,,,,,,,,na,3,,Unknown,Metagenome,Accession number NQT49111.1; suggested to be in Kuenenbacteriota,de Pins 2025,2025
unknown_42_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,1.49044764056991,30,8,,,,,,,,,,,,na,3,,Unknown,Metagenome,Accession number VDD89261.1; suggested to be in bacteria,de Pins 2025,2025
unknown_43_de_pins_2025,Unknown,sp,,FALSE,,TRUE,E. coli,1.06460545754994,30,8,,,,,,,,,,,,na,1’,,Unknown,Metagenome,Accession number B_1_S1_170907_scaffold_241187_5|GD2017_1_B_1_S1_170907_UNK|GD2017_1_B_1_S1_Biohub_170907,de Pins 2025,2025
unknown_1_liu_2023,Unknown,sp,,FALSE,,TRUE,E. coli,0.97,25,8,,,,,,,,,,,,na,1ɑ,,Limnocylindria,Metagenome,PLM2_5_b1_jun17_scaffold_3874 in paper,Liu 2023,2023
unknown_2_liu_2023,Unknown,sp,,FALSE,,TRUE,E. coli,0.2,25,8,,,,,,,,,,,,na,1’’,,Unknown,Metagenome,GXS_idba_scaffold_165 in paper,Liu 2023,2023
unknown_1_schulz_2022,Unknown,sp,,FALSE,,TRUE,E. coli,1.1,,,200,,,,,,12.2,,8.1,25,8,6.25,1_Anaero,,Chloroflexi,Metagenome,2 pKa model; Kane method for Sc/o so no pKa needed; accession number RME08239.1,Schulz 2022,2022
unknown_2_schulz_2022,Unknown,sp,,FALSE,,TRUE,E. coli,1.94,,,88,,,,,,26.4,,8.1,25,8,6.25,1_Anaero,,Calditrichia,Metagenome,2 pKa model; Kane method for Sc/o so no pKa needed; RMG64267.1,Schulz 2022,2022
unknown_gwa2_54_124_tsai_2025,Unknown,sp,GWA2_54_124,FALSE,,TRUE,E. coli,27.5,,,253,,,,,,10,,8.3,25,8,6.25,2,,Betaproteobacteria,Metagenome,2 pKa model used; accession number OGS68397.1,Tsai 2025,2025
unknown_cg1_02_49_23_tsai_2025,Unknown,sp,CG1_02_49_23,FALSE,,TRUE,E. coli,29.2,,,281,,,,,,12.5,,8.3,25,8,6.25,2,,Mariprofundia,Metagenome,Accession number cg1_0.2_scaffold_945_c_30; 2 pKa model used; called Zetaproteobacteria bacterium CG1_02_49_23 on NCBI,Tsai 2025,2025
unknown_tsai_2025,Unknown,sp,,FALSE,,TRUE,E. coli,19.7,,,166,,,,,,4.8,,8.3,25,8,6.25,2,,Actinomycetes,Bacteria,"2 pKa model used; accession number WP_052580230.1; originally listed as “unknown organism”, from suppressed record for Actinosporangium sp. NRRL B-3428; highest BLAST match is to Streptomyces",Tsai 2025,2025
unknown_cg_mariprof_03_tsai_2025,Unknown,sp,CG_Mariprof_03,FALSE,,TRUE,E. coli,26.9,,,300,,,,,,13.9,,8.3,25,8,6.25,2,,Mariprofundia,Metagenome,Accession number cg1_0.2_scaffold_4987_c_3; 2 pKa model used,Tsai 2025,2025
unknown_gwa2_54_124_davidi_2020_corrected,Unknown,sp,GWA2_54_124,FALSE,,TRUE,E. coli,26.4,,,276,,,,,,96,,8.3,25,8,6.25,2,,Betaproteobacteria,Metagenome,Corrected values from Davidi 2020; 2 pKa model used; accession number OGS68397.1,Tsai 2025,2025
unknown_cg1_02_49_23_davidi_2020_corrected,Unknown,sp,CG1_02_49_23,FALSE,,TRUE,E. coli,27.3,,,261,,,,,,105,,8.3,25,8,6.25,2,,Mariprofundia,Metagenome,Corrected value from Davidi 2020; accession number cg1_0.2_scaffold_945_c_30; 2 pKa model used; called Zetaproteobacteria bacterium CG1_02_49_23 on NCBI,Tsai 2025,2025
unknown_davidi_2020_corrected,Unknown,sp,,FALSE,,TRUE,E. coli,21,,,200,,,,,,82,,8.3,25,8,6.25,2,,Actinomycetes,Bacteria,"Corrected values from Davidi 2020; 2 pKa model used; Accession number WP_052580230.1; originally listed as “unknown organism”, from suppressed record for Actinosporangium sp. NRRL B-3428; highest BLAST match is to Streptomyces",Tsai 2025,2025
unknown_cg_mariprof_03_davidi_2020_corrected,Unknown,sp,CG_Mariprof_03,FALSE,,TRUE,E. coli,26.7,,,284,,,,,,94,,8.3,25,8,6.25,2,,Mariprofundia,Metagenome,Corrected values from Davidi 2020; accession number cg1_0.2_scaffold_4987_c_3; 2 pKa model used,Tsai 2025,2025
mosambicensis_Sharwood_2016b,Urochloa,mosambicensis,,FALSE,,TRUE,FALSE,5.7,,,14.8,,,464,,,82.5,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
panicoides_Sharwood_2016b,Urochloa,panicoides,,FALSE,,TRUE,FALSE,5.6,,,15.4,,,444,,,78.3,,,25,8.16,6.25,1B,canon,C4 plants,Plants,pKa not needed for Sc/o; pKa from Iniguez et al. 2021,Sharwood 2016b,2016
atrovirens_Galmés_2005,Urtica,atrovirens,bianorii,FALSE,,TRUE,FALSE,,,,,,,,,,90.2,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
membranacea_Galmés_2005,Urtica,membranacea,,FALSE,,TRUE,FALSE,,,,,,,,,,102,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Galmés 2005,2005
boninense_sakata_2024,Vaccinium,boninense,,FALSE,,TRUE,FALSE,,,,,,,,,,84.8,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
gigantea_capó-bauçà_2022a,Vallisneria,gigantea,,FALSE,,TRUE,FALSE,3.44,,,13.2,,,401.9,,,82,,,25,8.1,6.12,1B,canon,Aquatic plants,Plants,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022a,2022
viride_Kent_and_Tomany_1995,Veratrum,viride,,FALSE,,TRUE,FALSE,,,,,,,,,,108.8,25,7.9,,,6.12,1B,canon,C3 plants,Plants,,Kent and Tomany 1995,1995
thapsus_Yeoh_1981,Verbascum,thapsus,,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,C3 plants,Plants,,Yeoh 1981,1981
verrucomicrobium_davidi_2020,Verrucomicrobium,sp,3C,FALSE,,TRUE,E. coli,3.9,30,8,,,,,,,,,,,,na,2,,Verrucomicrobiia,Bacteria,Spectroscopic; accession number WP_018289723.1,Davidi 2020,2020
verrucomicrobium_de_pins_2025,Verrucomicrobium,sp,3C,FALSE,,FALSE,E. coli,2.76797418962984,30,8,,,,,,,,,,,,na,2,,Verrucomicrobiia,Bacteria,Accession number WP_018289723.1,de Pins 2025,2025
vinifera_manto_negra_Bota_2002,Vitis,vinifera,Manto Negra,FALSE,,TRUE,FALSE,,,,,,,,,,102.4,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Bota 2002,2002
vinifera_tempranillo_Bota_2002,Vitis,vinifera,Tempranillo,FALSE,,TRUE,FALSE,,,,,,,,,,100.8,25,8.2,,,6.2,1B,canon,C3 plants,Plants,"Cites Parry 1989 for method, so assumed pKa from that study",Bota 2002,2002
limneticus_de_pins_2024,Vulcanococcus,limneticus,,FALSE,,TRUE,E. coli,9.4,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_094587518.1,de Pins 2024,2024
limneticus_de_pins_2025,Vulcanococcus,limneticus,,FALSE,,FALSE,E. coli,20.4404247849588,30,8,,,,,,,,,,,,na,1Ac,canon,Cyanobacteria,Bacteria,Accession number WP_094587518.1,de Pins 2025,2025
pseudoretusa_sakata_2024,Wikstroemia,pseudoretusa,,FALSE,,TRUE,FALSE,,,,,,,,,,80.5,,,35,na,na,1B,canon,C3 plants,Plants,in vivo,Sakata 2024,2024
flavus_Horken_and_Tabita_1998,Xanthobacter,flavus,,FALSE,,TRUE,R. sphaeroides,2,,,100,,,,,,44.4,25,8,30,7.6,nf,1C,,Alphaproteobacteria,Bacteria,,Horken and Tabita 1998,1998
mays_Badger_1974,Zea,mays,,FALSE,,TRUE,FALSE,,,,39,25,8.3,,,,,,,,,6.37,1B,canon,C4 plants,Plants,pH from Badger & Andrews 1974,Badger 1974,1974
mays_Hermida-Carrera_2016,Zea,mays,Carella,FALSE,,TRUE,FALSE,4.1,,8.0,31.6,,8.0,784,,,87.3,,,25,8.2,6.11,1B,canon,C4 plants,Plants,"Ko is reported in Iniguez databases (Iniguez et al. 2019, Iniguez et al. 2021, etc.) although only kcat_o/Ko is reported in original paper",Hermida-Carrera 2016,2016
mays_Iñiguez_2021,Zea,mays,,FALSE,,FALSE,FALSE,3.7,,,21,,,444,,,87.7,,,25,na,na,1B,canon,C4 plants,Plants,methodology-corrected average from Iñiguez et al. 2021 across multiple cultivars,Iñiguez 2021,2021
mays_Ishikawa_2009,Zea,mays,,FALSE,,TRUE,FALSE,3.05,,,,,,,,,,,,28,8.2,na,1B,canon,C4 plants,Plants,Don't cite anything for pKa,Ishikawa 2009,2009
mays_ito_2024,Zea,mays,,FALSE,,TRUE,FALSE,2.33,25,8,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Ito 2024,2024
mays_Jordan_1981,Zea,mays,,FALSE,,TRUE,FALSE,,,,34,,,810,,,78,,,25,8.3,6.23,1B,canon,C4 plants,Plants,"cites Jordan & Ogren 1981 plant phys for methods, unclear what pKa was used but the 1983 paper seems to be an elaboration of this one and give 6.23",Jordan 1981,1981
mays_Kane_1994,Zea,mays,,FALSE,,TRUE,FALSE,,,,,,,,,,78.6,25,8.3,,,na,1B,canon,C4 plants,Plants,CO2/O2 gas mix added in presence of bovine CA; no pKa needed,Kane 1994,1994
mays_Kent_and_Tomany_1995,Zea,mays,,FALSE,,TRUE,FALSE,,,,,,,,,,94.5,25,7.9,,,6.12,1B,canon,C4 plants,Plants,,Kent and Tomany 1995,1995
mays_Kubien_2008,Zea,mays,,FALSE,,TRUE,FALSE,4.05,,,21.2,,,157,,,74.9,,8.3,25,8.1,6.25,1B,canon,C4 plants,Plants,Used Kane method for S so no pKa correction needed,Kubien 2008,2008
mays_Parry_1989,Zea,mays,FR9cms x FR35 70/E535 22F,FALSE,,TRUE,FALSE,,,,,,,,,,92,25,8.2,,,6.2,1B,canon,C4 plants,Plants,,Parry 1989,1989
mays_Rosnow_2015,Zea,mays,,FALSE,,TRUE,FALSE,3.58,25,8.0,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Rosnow 2015,2015
mays_Seemann_1984,Zea,mays,,FALSE,,TRUE,FALSE,6.42,30,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,Specific activity converted to kcat with factor of 1.146,Seemann 1984,1984
mays_Sharwood_2016a,Zea,mays,,FALSE,,TRUE,FALSE,5.5,,,18.9,,,,,,88,,,25,8,nf,1B,canon,C4 plants,Plants,No methods; just cite 2008 paper,Sharwood 2016a,2016
mays_Uemura_1996,Zea,mays,,FALSE,,TRUE,FALSE,,,,,,,,,,96.4,25,8.3,,,na,1B,canon,C4 plants,Plants,methods paper on measuring S,Uemura 1996,1996
mays_Yeoh_1980,Zea,mays,,FALSE,,TRUE,FALSE,,,,56,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
mays_Young_2016,Zea,mays,,FALSE,,TRUE,FALSE,5.5,,,19,,,397,,,88,,,25,8,6.25,1B,canon,C4 plants,Plants,pKa from Whitney et al. 2011; pKa not necessary for Sc/o,Young 2016,2016
marina_capó-bauçà_2022a,Zostera,marina,,FALSE,,TRUE,FALSE,2.8,,,25.3,,,1210,,,85.8,,,25,8.1,6.12,1B,canon,Aquatic plants,Plants,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022a,2022
noltii_capó-bauçà_2022a,Zostera,noltii,,FALSE,,TRUE,FALSE,2.57,,,29.8,,,851.9,,,72.8,,,25,8.1,6.12,1B,canon,Aquatic plants,Plants,pKa from Galmés 2014; Kane method for Sc/o so no need for pKa there,Capó-Bauçà 2022a,2022
japonica_Carmo-Silva_2010,Zoysia,japonica,,FALSE,,TRUE,FALSE,4.4,,,18.5,,,403,,,84.1,,,25,8.2,6.11,1B,canon,C4 plants,Plants,,Carmo-Silva 2010,2010
japonica_Sage_2002b,Zoysia,japonica,,FALSE,,TRUE,FALSE,4.05,28,8.2,,,,,,,,,,,,na,1B,canon,C4 plants,Plants,,Sage 2002b,2002
macrantha_Yeoh_1980,Zoysia,macrantha,,FALSE,,TRUE,FALSE,,,,34,25,8.0,,,,,,,,,6.37,1B,canon,C4 plants,Plants,,Yeoh 1980,1980
truncatus_Yeoh_1981,Zygocactus,truncatus,,FALSE,,TRUE,FALSE,,,,17,25,8.0,,,,,,,,,6.37,1B,canon,CAM plants,Plants,,Yeoh 1981,1981
