Package: EWAScaller
Title: Query and Analyse the 'EWAS Atlas' Database
Version: 0.1.0
Authors@R: person("Saadat", "Abu", email = "saadatabu1996@gmail.com", role = c("aut", "cre"))
Description: Provides a client for the 'EWAS Atlas' web services
    (<https://ngdc.cncb.ac.cn/ewas/>; Li et al. (2019)
    <doi:10.1093/nar/gky1027>), allowing users to query epigenome-wide
    association study (EWAS) data by CpG (cytosine-phosphate-guanine)
    probe identifier, gene symbol, or genomic region, and to run trait,
    Gene Ontology, KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway,
    and genomic location enrichment analyses on a set of CpG probes. Query
    functions support concurrent, rate-limited requests to the remote
    service. Results are returned as tidy data frames with dedicated
    summary and plotting methods, including word clouds of enriched
    'EWAS Atlas' trait terms.
License: MIT + file LICENSE
URL: https://github.com/SAADAT-Abu/EWAScaller
BugReports: https://github.com/SAADAT-Abu/EWAScaller/issues
Depends: R (>= 4.1.0)
Imports: httr, jsonlite, digest, parallel, ggplot2, ggwordcloud, stats,
        utils
Suggests: testthat (>= 3.0.0), knitr, rmarkdown
Encoding: UTF-8
Config/testthat/edition: 3
VignetteBuilder: knitr
LazyData: true
Config/roxygen2/version: 8.0.0
NeedsCompilation: no
Packaged: 2026-07-27 09:13:18 UTC; saadat
Author: Saadat Abu [aut, cre]
Maintainer: Saadat Abu <saadatabu1996@gmail.com>
Repository: CRAN
Date/Publication: 2026-08-05 08:40:09 UTC
Built: R 4.5.2; ; 2026-08-05 11:22:14 UTC; unix
