R: 'Galaxy' API Implementation

# 'Galaxy' API Implementation

## Documentation for package ‘GalaxyR’ version 0.1.2

- DESCRIPTION file.
- Package NEWS.

## Help Pages

galaxy | Create a Galaxy session object
Galaxy-class | Galaxy session object
galaxy_delete_dataset | Delete a Galaxy dataset by ID
galaxy_delete_datasets | Delete multiple Galaxy datasets by ID
galaxy_delete_history | Generic for deleting a Galaxy history
galaxy_delete_history-method | Generic for deleting a Galaxy history
galaxy_download_result | Generic for downloading files from a history
galaxy_download_result-method | Generic for downloading files from a history
galaxy_download_rocrate | Generic for downloading a history as an RO-Crate
galaxy_download_rocrate-method | Generic for downloading a history as an RO-Crate
galaxy_get_file_info | Get information for one or more Galaxy datasets
galaxy_get_tool | Retrieve detailed metadata for a Galaxy tool
galaxy_get_tool_id | Retrieve Galaxy tool IDs by name
galaxy_get_workflow | Receive workflow metadata from the API
galaxy_get_workflow_inputs | Retrieve input definitions for a Galaxy workflow
galaxy_has_key | Check whether a Galaxy API key is available
galaxy_history_size | Galaxy history size Get the disk usage / size of a Galaxy history
galaxy_initialize | Create a new Galaxy history
galaxy_initialize-method | Create a new Galaxy history
galaxy_list_files | List all files (datasets) in a Galaxy history
galaxy_list_files-method | List all files (datasets) in a Galaxy history
galaxy_list_histories | List Galaxy histories (name and history id)
galaxy_list_invocations | List workflow invocations for a given workflow
galaxy_list_tools | List tools installed on a Galaxy instance
galaxy_list_workflows | List workflows available to the user
galaxy_poll_tool | Generic for galaxy_poll_tool
galaxy_poll_tool-method | Generic for galaxy_poll_tool
galaxy_poll_workflow | Generic for polling workflows
galaxy_poll_workflow-method | Generic for polling workflows
galaxy_print_tool_inputs | Print tool inputs
galaxy_run_tool | Generic run tool
galaxy_run_tool-method | Generic run tool
galaxy_set_credentials | Set Galaxy connection parameters for the current R session
galaxy_start_workflow | Generic start workflow
galaxy_start_workflow-method | Generic start workflow
galaxy_upload_ftp | Generic upload ftp
galaxy_upload_ftp-method | Generic upload ftp
galaxy_upload_https | Generic upload file with https
galaxy_upload_https-method | Generic upload file with https