# Spectral Preprocessing and Chemometric Calibration of NIR Sensors

## Documentation for package ‘proximetricsR’ version 0.7.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

proximetricsR-package | Overview of the proximetricsR package
add_application_metadata | A function for adding application metadata to a list of 'spectral_model' objects
add_model_metadata | A function for adding model metadata to a 'spectral_model' object
calibrate | Calibrate a spectral model
calibrate.default | Calibrate a spectral model
calibrate.formula | Calibrate a spectral model
calibrate_models | Calibrate models for multiple response variables
calibration_control | A function that controls the calibration of models
extract_property_names | Extract the property names from a given 'data.frame'
fit_constructors | Fitting method constructors
fit_plsr | Fitting method constructors
fit_xlsr | Fitting method constructors
get_proxiscout_wavenumbers | ProxiScout standard wavenumbers
NIRcannabis | NIRcannabis
plot.spectral_model | Plot results of a given model
predict.read_cal | Read model parameters from ProxiMate .cal files
predict.spectral_model | Calibrate a spectral model
predict.spectral_multimodel | Calibrate models for multiple response variables
preprocess_recipe | Build and execute spectral preprocessing recipes
prep_derivative | Derivative constructor for spectral preprocessing
prep_detrend | Detrending constructor for spectral preprocessing
prep_resample | Resampling constructor for spectral preprocessing
prep_smooth | Smoothing constructor for spectral preprocessing
prep_snv | Standard Normal Variate constructor for spectral preprocessing
prep_transform | Reflectance/absorbance conversion constructor for spectral preprocessing
prep_wav_trim | Wavelength trimming constructor for spectral preprocessing
process | Build and execute spectral preprocessing recipes
proximate_add2nax | Prepare data for augmenting a nax application
proximate_data | Create a data frame for NIRWise PLUS applications
proximate_merge | Merge datasets of class 'proximate_data'
proximate_read_cal | Read model parameters from ProxiMate .cal files
proximate_read_data | Read ProxiMate (.tsv) files
proximate_read_nax | Reads and summarizes ProxiMate spectroscopic applications (nax files)
proximate_recalibrate_nax | Recalibrate a nax file
proximate_write_data | Write NIRWise PLUS readable tab-separated files
proximate_write_model | Write calibration (.cal), project (.prj) and report (.rtf) files to a specified directory
proximate_write_nax | Create an application file for the given list of models
proximetricsR | Overview of the proximetricsR package
proxiscout_read_data | Read and parse ProxiScout data from CSV or XLSX files
proxiscout_repetition_pattern | ProxiScout repetition pattern
proxiscout_write_data | Write data files for ProxiScout devices
proxiscout_write_model | Write a calibration model to ProxiScout JSON format
proxiscout_write_model_info | Write the model info into a JSON for ProxiScout devices
read_spc | Read and format spectral data from a file
spectral_fit | The spectral_fit class
validate | Validate predictions of class "spectral_prediction"
validate_prediction | Validate predictions of class "spectral_prediction"