abundance               Get the abundance data for sequences, bins,
                        samples, and treatments in a strollur object
add                     Add sequences, reports or resource references
                        to a strollur object
assign                  Assign sequence abundances, sequence
                        classifications, bins, bin representative
                        sequences, bin classifications or treatments to
                        a strollur object
clear                   clear
copy_dataset            copy_dataset
count                   Find the number of sequences, samples,
                        treatments or bins of a given type in a
                        strollur object
export_dataset          export_dataset
get_bin_types           get_bin_types
has_sample              has_sample
has_sequence_strings    has_sequence_strings
import_dataset          Import strollur object from exported
                        data.frame.
is_aligned              is_aligned
is_equal                is_equal
load_dataset            Load strollur object from .rds file
miseq_sop_example       Example strollur object
names                   Get the names of various data in a strollur
                        object
new_dataset             new_dataset
new_reference           new_reference
read_dada2              Create a strollur object from dada2 outputs
read_fasta              read_fasta
read_mothur             Create a strollur object from mothur outputs
read_mothur_cons_taxonomy
                        read_mothur_cons_taxonomy
read_mothur_count       read_mothur_count
read_mothur_list        read_mothur_list
read_mothur_oligos      read_mothur_oligos
read_mothur_rabund      read_mothur_rabund
read_mothur_shared      read_mothur_shared
read_mothur_taxonomy    read_mothur_taxonomy
read_phyloseq           Create a strollur object from a phyloseq object
read_qiime2             Create a strollur object from a qiime2 outputs
read_qiime2_feature_table
                        read_qiime2_feature_table
read_qiime2_metadata    read_qiime2_metadata
read_qiime2_taxonomy    read_qiime2_taxonomy
remove_file             remove_file
report                  Get a data.frame containing the given report in
                        a strollur object
save_dataset            save_dataset
sort_dataframe          sort_dataframe
strollur                The 'strollur' object stores the data
                        associated with your amplicon sequence
                        analysis.
strollur_example        strollur_example
summary                 Summarize the sequences data, custom reports,
                        and scrapped data in a strollur object
unpack_qiime2_artifact
                        unpack_qiime2_artifact
write_fasta             write_fasta
write_mothur            write_mothur
write_mothur_cons_taxonomy
                        write_mothur_cons_taxonomy
write_mothur_count      write_mothur_count
write_mothur_design     write_mothur_design
write_mothur_list       write_mothur_list
write_mothur_rabund     write_mothur_rabund
write_mothur_shared     write_mothur_shared
write_phyloseq          write_phyloseq
write_taxonomy          write_taxonomy
xdev_abundance          Get a data.frame containing the requested
                        abundance data
xdev_add_references     Add resource references
xdev_add_report         Add a report to a strollur object
xdev_add_sequences      xdev_add_sequences
xdev_assign_bin_representative_sequences
                        xdev_assign_bin_representative_sequences
xdev_assign_bin_taxonomy
                        xdev_assign_bin_taxonomy
xdev_assign_bins        xdev_assign_bins
xdev_assign_sequence_abundance
                        xdev_assign_sequence_abundance
xdev_assign_sequence_taxonomy
                        xdev_assign_sequence_taxonomy
xdev_assign_sequence_taxonomy_tidy
                        xdev_assign_sequence_taxonomy_tidy
xdev_assign_treatments
                        xdev_assign_treatments
xdev_count              xdev_count
xdev_get_abundances_by_sample
                        xdev_get_abundances_by_sample
xdev_get_by_sample      xdev_get_by_sample
xdev_get_list_vector    xdev_get_list_vector
xdev_get_sequences      xdev_get_sequences
xdev_has_sequence_taxonomy
                        xdev_has_sequence_taxonomy
xdev_merge_bins         xdev_merge_bins
xdev_merge_sequences    xdev_merge_sequences
xdev_names              xdev_names
xdev_remove_bins        xdev_remove_bins
xdev_remove_lineages    xdev_remove_lineages
xdev_remove_samples     xdev_remove_samples
xdev_remove_sequences   xdev_remove_sequences
xdev_report             xdev_report
xdev_set_abundance      xdev_set_abundance
xdev_set_abundances     xdev_set_abundances
xdev_set_dataset_name   xdev_set_dataset_name
xdev_set_sequences      xdev_set_sequences
