Type: Package
Package: ocrRBBR
Title: Explain Gene Expression with Boolean Rules of Chromatin States
Version: 0.1.0
Authors@R: 
    person("Seyed Amir", "Malekpour", , "a.malekpour@ipm.ir", role = c("aut", "cre"))
Description: Infers Boolean rules among cis-regulatory regions using
    paired chromatin accessibility and gene expression data at bulk and
    single-cell levels.  Links regulatory regions to target genes,
    providing insights into gene regulation mechanisms.
License: GPL-3
URL: https://github.com/CompBioIPM/ocrRBBR
Depends: R (>= 4.4)
Imports: doParallel, dplyr, foreach, GenomeInfoDb, GenomicRanges,
        glmnet, Matrix, parallel, rtracklayer, S4Vectors, stats, utils
Config/testthat/edition: 3
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
RoxygenNote: 7.3.3
NeedsCompilation: no
Packaged: 2026-02-05 18:55:34 UTC; seyed_000
Author: Seyed Amir Malekpour [aut, cre]
Maintainer: Seyed Amir Malekpour <a.malekpour@ipm.ir>
Repository: CRAN
Date/Publication: 2026-02-09 13:50:07 UTC
Built: R 4.7.0; ; 2026-05-29 04:14:06 UTC; windows
