# Conditional Inference Procedures in a Permutation Test Framework

## Documentation for package ‘coin’ version 1.4-5

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

A C D E F G H I J K L M N O P Q R S T V W Z

coin-package | General Information on the 'coin' Package

## -- A --

alpha | Genetic Components of Alcoholism
alzheimer | Smoking and Alzheimer's Disease
ansari_test | Two- and K-Sample Scale Tests
ansari_test.formula | Two- and K-Sample Scale Tests
ansari_test.IndependenceProblem | Two- and K-Sample Scale Tests
ansari_trafo | Functions for Data Transformation
approximate | Specification of the Reference Distribution
ApproxNullDistribution | Computation of the Reference Distribution
ApproxNullDistribution-class | Class '"NullDistribution"' and Its Subclasses
ApproxNullDistribution-method | Computation of the Reference Distribution
ApproxNullDistribution-methods | Computation of the Reference Distribution
asat | Toxicological Study on Female Wistar Rats
AsymptNullDistribution | Computation of the Reference Distribution
AsymptNullDistribution-class | Class '"NullDistribution"' and Its Subclasses
AsymptNullDistribution-method | Computation of the Reference Distribution
AsymptNullDistribution-methods | Computation of the Reference Distribution
asymptotic | Specification of the Reference Distribution

## -- C --

chisq_test | Tests of Independence in Two- or Three-Way Contingency Tables
chisq_test.formula | Tests of Independence in Two- or Three-Way Contingency Tables
chisq_test.IndependenceProblem | Tests of Independence in Two- or Three-Way Contingency Tables
chisq_test.table | Tests of Independence in Two- or Three-Way Contingency Tables
cmh_test | Tests of Independence in Two- or Three-Way Contingency Tables
cmh_test.formula | Tests of Independence in Two- or Three-Way Contingency Tables
cmh_test.IndependenceProblem | Tests of Independence in Two- or Three-Way Contingency Tables
cmh_test.table | Tests of Independence in Two- or Three-Way Contingency Tables
coin | General Information on the 'coin' Package
confint-method | Class '"IndependenceTest"' and Its Subclasses
conover_test | Two- and K-Sample Scale Tests
conover_test.formula | Two- and K-Sample Scale Tests
conover_test.IndependenceProblem | Two- and K-Sample Scale Tests
consal_trafo | Functions for Data Transformation
covariance | Extraction of the Expectation, Variance and Covariance of the Linear Statistic
covariance-method | Extraction of the Expectation, Variance and Covariance of the Linear Statistic
covariance-methods | Extraction of the Expectation, Variance and Covariance of the Linear Statistic
CovarianceMatrix-class | Class '"VarCovar"' and its subclasses
CWD | Coarse Woody Debris

## -- D --

dperm | Computation of the Permutation Distribution
dperm-method | Computation of the Permutation Distribution
dperm-methods | Computation of the Permutation Distribution

## -- E --

exact | Specification of the Reference Distribution
ExactNullDistribution | Computation of the Reference Distribution
ExactNullDistribution-class | Class '"NullDistribution"' and Its Subclasses
ExactNullDistribution-method | Computation of the Reference Distribution
ExactNullDistribution-methods | Computation of the Reference Distribution
expectation | Extraction of the Expectation, Variance and Covariance of the Linear Statistic
expectation-method | Extraction of the Expectation, Variance and Covariance of the Linear Statistic
expectation-methods | Extraction of the Expectation, Variance and Covariance of the Linear Statistic

## -- F --

fisyat_test | Correlation Tests
fisyat_test.formula | Correlation Tests
fisyat_test.IndependenceProblem | Correlation Tests
fligner_test | Two- and K-Sample Scale Tests
fligner_test.formula | Two- and K-Sample Scale Tests
fligner_test.IndependenceProblem | Two- and K-Sample Scale Tests
fligner_trafo | Functions for Data Transformation
fmaxstat_trafo | Functions for Data Transformation
friedman_test | Symmetry Tests
friedman_test.formula | Symmetry Tests
friedman_test.SymmetryProblem | Symmetry Tests
f_trafo | Functions for Data Transformation

## -- G --

glioma | Malignant Glioma Pilot Study
GTSG | Gastrointestinal Tumor Study Group

## -- H --

hohnloser | Left Ventricular Ejection Fraction

## -- I --

id_trafo | Functions for Data Transformation
IndependenceLinearStatistic-class | Class '"IndependenceLinearStatistic"'
IndependenceProblem-class | Class '"IndependenceProblem"'
IndependenceTest-class | Class '"IndependenceTest"' and Its Subclasses
IndependenceTestProblem-class | Class '"IndependenceTestProblem"'
IndependenceTestStatistic-class | Class '"IndependenceTestStatistic"' and Its Subclasses
independence_test | General Independence Test
independence_test.formula | General Independence Test
independence_test.IndependenceProblem | General Independence Test
independence_test.table | General Independence Test
initialize-method | Class '"IndependenceLinearStatistic"'
initialize-method | Class '"IndependenceProblem"'
initialize-method | Class '"IndependenceTestProblem"'
initialize-method | Class '"IndependenceTestStatistic"' and Its Subclasses
initialize-method | Class '"SymmetryProblem"'
initialize-method | Class '"VarCovar"' and its subclasses

## -- J --

jobsatisfaction | Income and Job Satisfaction

## -- K --

klotz_test | Two- and K-Sample Scale Tests
klotz_test.formula | Two- and K-Sample Scale Tests
klotz_test.IndependenceProblem | Two- and K-Sample Scale Tests
klotz_trafo | Functions for Data Transformation
koziol_test | Correlation Tests
koziol_test.formula | Correlation Tests
koziol_test.IndependenceProblem | Correlation Tests
koziol_trafo | Functions for Data Transformation
kruskal_test | Two- and K-Sample Location Tests
kruskal_test.formula | Two- and K-Sample Location Tests
kruskal_test.IndependenceProblem | Two- and K-Sample Location Tests

## -- L --

lbl_test | Tests of Independence in Two- or Three-Way Contingency Tables
lbl_test.formula | Tests of Independence in Two- or Three-Way Contingency Tables
lbl_test.IndependenceProblem | Tests of Independence in Two- or Three-Way Contingency Tables
lbl_test.table | Tests of Independence in Two- or Three-Way Contingency Tables
logrank_test | Two- and K-Sample Tests for Censored Data
logrank_test.formula | Two- and K-Sample Tests for Censored Data
logrank_test.IndependenceProblem | Two- and K-Sample Tests for Censored Data
logrank_trafo | Functions for Data Transformation
logrank_weight | Functions for Data Transformation

## -- M --

malformations | Maternal Drinking and Congenital Sex Organ Malformation
maxstat_test | Generalized Maximally Selected Statistics
maxstat_test.formula | Generalized Maximally Selected Statistics
maxstat_test.IndependenceProblem | Generalized Maximally Selected Statistics
maxstat_test.table | Generalized Maximally Selected Statistics
maxstat_trafo | Functions for Data Transformation
MaxTypeIndependenceTest-class | Class '"IndependenceTest"' and Its Subclasses
MaxTypeIndependenceTestStatistic-class | Class '"IndependenceTestStatistic"' and Its Subclasses
mcp_trafo | Functions for Data Transformation
median_test | Two- and K-Sample Location Tests
median_test.formula | Two- and K-Sample Location Tests
median_test.IndependenceProblem | Two- and K-Sample Location Tests
median_trafo | Functions for Data Transformation
mercuryfish | Chromosomal Effects of Mercury-Contaminated Fish Consumption
mh_test | Marginal Homogeneity Tests
mh_test.formula | Marginal Homogeneity Tests
mh_test.SymmetryProblem | Marginal Homogeneity Tests
mh_test.table | Marginal Homogeneity Tests
midpvalue | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
midpvalue-method | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
midpvalue-methods | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
mood_test | Two- and K-Sample Scale Tests
mood_test.formula | Two- and K-Sample Scale Tests
mood_test.IndependenceProblem | Two- and K-Sample Scale Tests
mood_trafo | Functions for Data Transformation

## -- N --

neuropathy | Acute Painful Diabetic Neuropathy
normal_test | Two- and K-Sample Location Tests
normal_test.formula | Two- and K-Sample Location Tests
normal_test.IndependenceProblem | Two- and K-Sample Location Tests
normal_trafo | Functions for Data Transformation
NullDistribution-class | Class '"NullDistribution"' and Its Subclasses

## -- O --

ocarcinoma | Ovarian Carcinoma
ofmaxstat_trafo | Functions for Data Transformation
of_trafo | Functions for Data Transformation
oneway_test | Two- and K-Sample Location Tests
oneway_test.formula | Two- and K-Sample Location Tests
oneway_test.IndependenceProblem | Two- and K-Sample Location Tests

## -- P --

photocar | Multiple Dosing Photococarcinogenicity Experiment
pperm | Computation of the Permutation Distribution
pperm-method | Computation of the Permutation Distribution
pperm-methods | Computation of the Permutation Distribution
pvalue | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
PValue-class | Class '"PValue"'
pvalue-method | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
pvalue-methods | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
pvalue_interval | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
pvalue_interval-method | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
pvalue_interval-methods | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size

## -- Q --

qperm | Computation of the Permutation Distribution
qperm-method | Computation of the Permutation Distribution
qperm-methods | Computation of the Permutation Distribution
quade_test | Symmetry Tests
quade_test.formula | Symmetry Tests
quade_test.SymmetryProblem | Symmetry Tests
quadrant_test | Correlation Tests
quadrant_test.formula | Correlation Tests
quadrant_test.IndependenceProblem | Correlation Tests
QuadTypeIndependenceTest-class | Class '"IndependenceTest"' and Its Subclasses
QuadTypeIndependenceTestStatistic-class | Class '"IndependenceTestStatistic"' and Its Subclasses

## -- R --

rank_trafo | Functions for Data Transformation
rotarod | Rotating Rats
rperm | Computation of the Permutation Distribution
rperm-method | Computation of the Permutation Distribution
rperm-methods | Computation of the Permutation Distribution

## -- S --

savage_test | Two- and K-Sample Location Tests
savage_test.formula | Two- and K-Sample Location Tests
savage_test.IndependenceProblem | Two- and K-Sample Location Tests
savage_trafo | Functions for Data Transformation
ScalarIndependenceTest-class | Class '"IndependenceTest"' and Its Subclasses
ScalarIndependenceTestConfint-class | Class '"IndependenceTest"' and Its Subclasses
ScalarIndependenceTestStatistic-class | Class '"IndependenceTestStatistic"' and Its Subclasses
show-method | Class '"IndependenceTest"' and Its Subclasses
sign_test | Symmetry Tests
sign_test.formula | Symmetry Tests
sign_test.SymmetryProblem | Symmetry Tests
size | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
size-method | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
size-methods | Computation of the p-Value, Mid-p-Value, p-Value Interval and Test Size
spearman_test | Correlation Tests
spearman_test.formula | Correlation Tests
spearman_test.IndependenceProblem | Correlation Tests
statistic | Extraction of the Test Statistic and the Linear Statistic
statistic-method | Extraction of the Test Statistic and the Linear Statistic
statistic-methods | Extraction of the Test Statistic and the Linear Statistic
support | Computation of the Permutation Distribution
support-method | Computation of the Permutation Distribution
support-methods | Computation of the Permutation Distribution
surv_test | Two- and K-Sample Tests for Censored Data
SymmetryProblem-class | Class '"SymmetryProblem"'
symmetry_test | General Symmetry Test
symmetry_test.formula | General Symmetry Test
symmetry_test.SymmetryProblem | General Symmetry Test
symmetry_test.table | General Symmetry Test

## -- T --

taha_test | Two- and K-Sample Scale Tests
taha_test.formula | Two- and K-Sample Scale Tests
taha_test.IndependenceProblem | Two- and K-Sample Scale Tests
trafo | Functions for Data Transformation
treepipit | Tree Pipits in Franconian Oak Forests

## -- V --

VarCovar-class | Class '"VarCovar"' and its subclasses
variance | Extraction of the Expectation, Variance and Covariance of the Linear Statistic
Variance-class | Class '"VarCovar"' and its subclasses
variance-method | Extraction of the Expectation, Variance and Covariance of the Linear Statistic
variance-methods | Extraction of the Expectation, Variance and Covariance of the Linear Statistic
vision | Unaided Distance Vision

## -- W --

wilcoxsign_test | Symmetry Tests
wilcoxsign_test.formula | Symmetry Tests
wilcoxsign_test.SymmetryProblem | Symmetry Tests
wilcox_test | Two- and K-Sample Location Tests
wilcox_test.formula | Two- and K-Sample Location Tests
wilcox_test.IndependenceProblem | Two- and K-Sample Location Tests

## -- Z --

zheng_trafo | Functions for Data Transformation