Package: erah
Type: Package
Version: 2.2.0
Authors@R: c(person(given = "Xavier",
                        family = "Domingo-Almenara",
                        role = c("aut", "cre", "cph"),
                        email = "xavier.domingo@urv.cat"),
                 person(given = c("Jasen", "P."),
                        family = "Finch",
                        role = "ctb"),
                 person(given = "Adria",
                        family = "Olomi",
                        role = "ctb"),
                 person(given = "Sara",
                        family = "Samino",
                        role = "aut"),
                 person(given = "Maria",
                        family = "Vinaixa",
                        role = "aut"),
                 person(given = "Alexandre",
                        family = "Perera",
                        role = c("aut", "ths")),
                 person(given = "Jesus",
                        family = "Brezmes",
                        role = c("aut", "ths")),
                 person(given = "Oscar",
                        family = "Yanes",
                        role = c("aut", "ths")))
Author: Xavier Domingo-Almenara [aut, cre, cph],
  Jasen P. Finch [ctb],
  Adria Olomi [ctb],
  Sara Samino [aut],
  Maria Vinaixa [aut],
  Alexandre Perera [aut, ths],
  Jesus Brezmes [aut, ths],
  Oscar Yanes [aut, ths]
Title: Automated Spectral Deconvolution, Alignment, and Metabolite
        Identification in GC/MS-Based Untargeted Metabolomics
Depends: R (>= 4.0)
Imports: Rcpp, osd, HiClimR, igraph, signal, quantreg, methods, tibble,
        progress, furrr
Suggests: ncdf4, mzR, future, knitr, rmarkdown, prettydoc, covr,
        gcspikelite, testthat
Maintainer: Xavier Domingo-Almenara <xavier.domingo@urv.cat>
Description: Automated compound deconvolution, alignment across samples, and identification of metabolites by spectral library matching in Gas Chromatography - Mass spectrometry (GC-MS) untargeted metabolomics. Outputs a table with compound names, matching scores and the integrated area of the compound for each sample. Package implementation is described in Domingo-Almenara et al. (2016) <doi:10.1021/acs.analchem.6b02927>.
License: GPL (>= 2)
URL: https://metsyslab.com/, http://xdomingoal.github.io/erah-devel/
BugReports: https://github.com/xdomingoal/erah-devel/issues
biocViews: MassSpectrometry, Metabolomics
LazyData: yes
NeedsCompilation: yes
VignetteBuilder: knitr
RoxygenNote: 7.3.2
Encoding: UTF-8
Packaged: 2025-07-17 13:52:01 UTC; xavidomingo
Repository: CRAN
Date/Publication: 2025-07-17 23:00:08 UTC
LinkingTo: Rcpp
Built: R 4.4.3; x86_64-w64-mingw32; 2026-01-12 20:26:46 UTC; windows
Archs: x64
