# Statistical Analyses of De Novo Genetic Variants

## Documentation for package ‘denovolyzeR’ version 0.2.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

denovolyzeR-package | A package for the analysis of _de novo_ sequencing variants
autismDeNovos | de novo variants found in 1,078 autism trios
denovolyze | Evaluates burden of _de novo_ variation against expectation
denovolyzeByClass | Evaluates burden of _de novo_ variation against expectation
denovolyzeByGene | Evaluates burden of _de novo_ variation against expectation
denovolyzeMultiHits | Determine significance of genes with multiple _de novos_
denovolyzeR | A package for the analysis of _de novo_ sequencing variants
fmrpGenes | FMRP genes
parseInput | Checks input for errors
PermuteMultiHits | Permutes x variants across a genelist, and counts genes with multiple hits
viewProbabilityTable | Displays underlying _de novo_ probability tables