# High-Level Plotting Built Upon 'ggplot2' and Other Plotting Packages

## Documentation for package ‘plotthis’ version 0.14.0

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

AlluvialPlot | Sankey / Alluvial Plot
AreaPlot | Area plot
BarPlot | Bar / SplitBar / Waterfall Plot
BeeswarmPlot | Box / Violin / Bar / Beeswarm plot
BoxPlot | Box / Violin / Bar / Beeswarm plot
ChordPlot | Chord / Circos plot
CircosPlot | Chord / Circos plot
ClustreePlot | Clustree Plot
CorPairsPlot | Correlation pairs (scatterplot matrix)
CorPlot | Correlation scatter plot
DensityPlot | Density Plot / Histogram
DimPlot | DimPlot / FeatureDimPlot
dim_example | An example data for dimensionality reduction plot
DotPlot | Dot Plot, Scatter Plot, and Lollipop Plot
element_grob.element_textbox | Theme element that add a box to the text
element_textbox | Theme element that add a box to the text
EnrichMap | Enrichment Map and Enrichment Network
EnrichNetwork | Enrichment Map and Enrichment Network
enrich_example | An example of clusterProfiler enrichment result
enrich_multidb_example | An example of clusterProfiler enrichment result with multiple databases
FeatureDimPlot | DimPlot / FeatureDimPlot
GSEAPlot | GSEA summary dot plot
GSEASummaryPlot | GSEA summary dot plot
gsea_example | An example of GSEA result from fgsea package
Heatmap | Heatmap
Histogram | Density Plot / Histogram
JitterPlot | Jitter plot
LinePlot | Line plot
LinkedHeatmap | Linked Heatmap
LollipopPlot | Dot Plot, Scatter Plot, and Lollipop Plot
ManhattanPlot | Manhattan plot
Network | Network
palette_list | A list of palettes for use in data visualization
palette_this | Color palettes collected in plotthis.
PieChart | Pie chart
QQPlot | QQ/PP plot
RadarPlot | Radar plot / Spider plot
RarefactionPlot | Rarefaction / extrapolation plot
RidgePlot | Ridge Plot
RingPlot | Ring plot (multi-layer donut chart)
ROCCurve | ROC curve
SankeyPlot | Sankey / Alluvial Plot
ScatterPlot | Scatter Plot
show_palettes | Show the color palettes
SpatImagePlot | Spatial visualization functions for terra objects and point data
SpatMasksPlot | Spatial visualization functions for terra objects and point data
SpatPointsPlot | Spatial visualization functions for terra objects and point data
SpatShapesPlot | Spatial visualization functions for terra objects and point data
SpatShapesPlot.data.frame | Spatial visualization functions for terra objects and point data
SpatShapesPlot.SpatVector | Spatial visualization functions for terra objects and point data
SpiderPlot | Radar plot / Spider plot
SplitBarPlot | Bar / SplitBar / Waterfall Plot
theme_blank | Blank theme
theme_box | Box theme
theme_this | A ggplot2 theme and palettes for plotthis Borrowed from the 'theme_this' function in the 'SCP' pipeline
TrendPlot | Trend plot
UpsetPlot | UpSet Plot
VelocityPlot | Cell velocity plot
VennDiagram | Venn / Euler diagram
ViolinPlot | Box / Violin / Bar / Beeswarm plot
VolcanoPlot | Volcano plot
WaterfallPlot | Bar / SplitBar / Waterfall Plot
WordCloudPlot | Word cloud plot
words_excluded | Excluded words in keyword enrichment analysis and extraction