b938f14928f87dac2127ff5f4051c288 *DESCRIPTION
3e7a3556d71fe6a77c59cbaacd86550b *NAMESPACE
d39cfd8b67dada9b7badfd203780bcfe *NEWS.md
004754c861145b7394f12089d4a0635f *R/DGEobj.utils.R
17c6bb0a898a2f0bd469d0c87386d934 *R/convertCounts.R
7b3cf6257edeccf3f3308de83f1b4560 *R/extractCol.R
470553e4e336aa08277a76df97bbc5fd *R/internal.R
f733ba334748f241c09e7c86c786a65f *R/lowIntFilter.R
02c30fe6d39413d5d3d92f40008596ce *R/rsqCalc.R
6e432475ec8cf71df9deb77bc0d89e54 *R/runContrasts.R
03cae8e83bd65139079f0342290ee73d *R/runEdgeRNorm.R
fd8c5d40f76040d6467010b95821fb95 *R/runIHW.R
224d1d264ca001d138257f1856d9ac83 *R/runPower.R
9f816ba9e191175fd62f60b7c2dfb39a *R/runQvalue.R
331faef852496bea2a6231972af0746b *R/runSVA.R
192af9425265beec1d75ddb2d14c5b55 *R/runVoom.R
c7eb0d0073ee292cd6359e17664cb7a8 *R/summarizeSigCounts.R
5e96b218c1cb3f6df4170943a0750202 *R/topTable.merge.R
653a8368eff9c90dc6cb7a0ec0d22835 *README.md
dfebb3791e3fe1020ac39b3fb98e1fc2 *build/partial.rdb
63167ab95f6181a82696d3b5f3ef0b81 *build/vignette.rds
638bd57043a69bad896db69aa56b5dca *inst/doc/DGEobj.utils_Workflow.Rmd
acbdf461ee4c304726f0e83b938067dc *inst/doc/DGEobj.utils_Workflow.html
c24656ed253341dee3d822c2456233a4 *man/DGEobj.utils-package.Rd
a01df6f31f4ee9f834fc2893fdf36b49 *man/convertCounts.Rd
47a487f1a698d3702f2b32657dfb6b11 *man/extractCol.Rd
6e26eafa4a3d6448f758b33dae385225 *man/lowIntFilter.Rd
f4465d5cae6d6c241b9d71a49d012c69 *man/rsqCalc.Rd
7b8035d85e6bd6bfff980c8fb100eb69 *man/runContrasts.Rd
d8ac413e260d121e1502eec4b26995e3 *man/runEdgeRNorm.Rd
a38c99a66c65a0bf897fab81e7ffeae6 *man/runIHW.Rd
403e3adc5e7a505f7d0775401b102abc *man/runPower.Rd
474fe8a5178b3aec48c42f3301e6f9a6 *man/runQvalue.Rd
3ed2a73e19c39f02ef8829db05b6a7c4 *man/runSVA.Rd
5e2c2b42884f05b4d2e9b877a9b362b0 *man/runVoom.Rd
8ac5d6b2b25458fef96cebcf045f785e *man/summarizeSigCounts.Rd
38cd6fa5ef60fbaf9d166c3f3e2b28a4 *man/topTable.merge.Rd
7711c5b50ab7ac69fc679af0efc07fd5 *man/tpm.direct.Rd
36e52c9dfa3f04a32511798e75ad724c *man/tpm.on.subset.Rd
98ae1e6b6b99c63bc14f8aa2ca0e46ac *tests/testthat.R
268ffcb125bd7cf839fcfbb8b102e034 *tests/testthat/Rplots.pdf
463043ef691c5e0ab685e433eb9b940e *tests/testthat/setup.R
1bbe7e0375102cec60fa42e6d0645b11 *tests/testthat/teardown.R
913f0ba828556ce67289e8a1f48bc592 *tests/testthat/test_convertCounts.R
5f4cd93d8363323c741cc90846edfb13 *tests/testthat/test_extractCol.R
b735a2395cc76ef9302131c55461897f *tests/testthat/test_lowIntFilter.R
9f1e33cf8dccd9ffd0c820d65e135d99 *tests/testthat/test_rsqCalc.R
99e7587f41ce37160ae5cc47b5ebf835 *tests/testthat/test_runContrasts.R
3a2ab46825f0f35ea22f49d609dd1212 *tests/testthat/test_runEdgeRNorm.R
8965c2ca4f285a5866d42d73ae16b2d3 *tests/testthat/test_runIHW.R
5efb914532b58c3f9c8c48c8f6143ac1 *tests/testthat/test_runPower.R
dd9884a52d63472c415bc68aaacd0bae *tests/testthat/test_runQvalue.R
89d46002263b5cbfa58bea55ef1ebf38 *tests/testthat/test_runSVA.R
5dc56337ffcc226870e019ebc68717a7 *tests/testthat/test_runVoom.R
e2fa94a106d43d8686f886c22cd2f407 *tests/testthat/test_summarizeSigCounts.R
04af4d80998dd64ae3b921797468620b *tests/testthat/test_topTable.merge.R
638bd57043a69bad896db69aa56b5dca *vignettes/DGEobj.utils_Workflow.Rmd
bf706fbc0adff006b6606eea5c70b219 *vignettes/DGEobj.utils_Workflow.Rmd.orig
707369a0d5cd60e6a58de341309565b7 *vignettes/figure-Normalize-1.png
6c7588ca76c278f02ea67dbfc0a8b371 *vignettes/figure-runVoom-1.png
8fbf1213f322f74a450ebe36e67a5805 *vignettes/precompiled_vignettes.R
83bbce927bd2aee9130438d11e368cdd *vignettes/supporting/simple.RDS
