54a28d90aca5b9a69ac36d2954636aca *DESCRIPTION
d47debaa62834676b835c576b1114c29 *NAMESPACE
1f203c9120059ce248b34fbfc6c80fb4 *R/ABmean.R
d434744976e588ad3629829e4f4afdbf *R/ABmedian.R
ed8cd6c02672ec8f7e5f94b799ee5200 *R/ABtest.R
4b6d5ea331b8b10861d4531d20ceb60d *R/LengthEnough.R
07791309989be914884bc6e752bb7d2b *R/WRank.R
8e8396dec14a28ba852e944ffe5b9c73 *R/affymetrix.getAB.R
9a9aafe9e89bcd044e1ae11ad741e67e *R/affymetrix.getlogRbfreq.R
479a97ad5872cf8ce1a481e9294552db *R/centro.R
880c48c412d881d68201fdd50b555572 *R/cluster.1.R
56ade860a636b0121ca0e06c42c25294 *R/cluster.2.R
048426cdfc1341881b7bdc36c54d5d53 *R/clustertest.R
2dbc30d2cb7dc9ebb8947339f885faa2 *R/cnvlist.combine.R
f1d4e680a5bc63c82b8ac8dae02f4c13 *R/cnvlist.update.R
b3b1b62f7111d479131e6c286020b2a9 *R/cnvlist4.R
93372a94603cc187cd422cefe062b80c *R/combine.R
693d1c3dde55eca078d7045e9716adbf *R/combine.sub.R
86fa110a2230e57355bc9e5d3681e468 *R/create.PSCN.R
0f494dc31405a2dd88aa0a96dab59cfb *R/createHyper.R
4e531273b139d2efa6f090e12fa5d157 *R/event.summary.R
cd18cda146d87227a1200fb094cdacb3 *R/getmusigma.R
cb710bcad1f0c4af8c2e52021b92db30 *R/group.number.R
c7e9f793e4a09e93153ff02fd96e5b99 *R/illumina.getAB.R
fb091eacfaf3a183834ae95fd3807082 *R/illumina.getlogRbfreq.R
cd54bea95f71d190e0114cf4f505947a *R/initialHyper.PSCN.R
4b8d721a5ed716783032d42723db6ce1 *R/initialmixstate.R
bf2d4af6834bbb1c293a7652168223f0 *R/length.PSCN.R
db2ccc539e1225c6096b21592eda2c8b *R/normal.comp.R
a20c215428722154df387a8ad66fcb7a *R/plotsub.R
bb32ed8ffb15d94cc8acc57da299792f *R/print.PSCN.R
8e8f2961e3fb66312e6b49090e881016 *R/printHyper.R
95b3bf0d2cdb95b45ff4733769f2f0b8 *R/pscn.plot.R
12423f5df16207b51509d4abd4aec3ac *R/pscnlist.R
684da37e015404c9bcebc8f1d5b1a439 *R/readHyper.R
f3f8c2f4a2482071d9fa88d1a4865f26 *R/regroup.theta.R
8fad7f70f0213458c4b6aee3045e1fcc *R/segment.R
a197ad7b3a2aa6db261400d949d59859 *R/segment.sub.R
d1528156969febe2d011c51348453078 *R/segmentation.R
26aec2cc3f06ca3e80fbeb742c2d04af *R/smooth.PSCN.R
0972061a3632687550623eabbc649724 *R/smoothing.R
550e06667a2d319e21f711c0adda7268 *R/zz.R
3a5ba35a0b2ef54a4a3c90ce6b7a3b96 *data/Affy1027chr2.rda
37d11648d2ccb686cfe6f89c2ac96a33 *data/AffySW1417chr17.rda
f9e8881aa53c15cb831f02a4d8c6f1e4 *data/Illu0258chr2.rda
1ea8aa42f8beef5289f7768da0e0f8fa *data/Illu0332chr3.rda
6a65cca235368b30154e6f192e1af07e *data/Illu0332chr3_mini.rda
304cdbc346db0a730fa3a3ac5a8807f4 *data/datalist
b8c1373edf56f6f98b122c8a2f3b3135 *man/ABmean.Rd
57de32471e7b68f0954ae3800b5eabc1 *man/ABmedian.Rd
806dff41e03aefe78c48ad6c41fa9c50 *man/ABtest.Rd
d02350bc2c2f970ed33000ede27652ed *man/Affy1027chr2.Rd
4fc8ad7c11250854ba4e8767d39d484e *man/AffySW1417chr17.Rd
e4533adf9f1d5b08a30bb8d4b9156c44 *man/Illu0258chr2.Rd
8018f72373373c751dc0374a55c4292d *man/Illu0332chr3.Rd
c5aa4067aba70977629a305a9d8778b8 *man/Illu0332chr3_mini.Rd
bf7f8703289ebc7e0633e898bacc890b *man/LengthEnough.Rd
44b07a3adafbfe6dce1b3eb7024122d6 *man/PSCN-package.Rd
5051b3c2b80c650b41d06aa77b7b549f *man/WRank.Rd
8343507a6126009e86d4204d7c0ce080 *man/affymetrix.getAB.Rd
2618cab8324abbac5b5940c5c06e20d2 *man/affymetrix.getlogRbfreq.Rd
41813080b4bec67a765063a9fd5b9042 *man/centro.Rd
4bbb7b058597b52c81138d316d77be5d *man/cluster.1.Rd
685729266246007de0e87114be27a125 *man/cluster.2.Rd
5ce43ef32e39f1a2f78b950946e84cd9 *man/clustertest.Rd
43a8a7ec444eead4997486b301712682 *man/cnvlist.combine.Rd
2728ceb4237d97e805a896cd8e20c784 *man/cnvlist.update.Rd
d91ebe83102a9cc684a16dbca712d974 *man/cnvlist4.Rd
eb6a3ddee1c319ae710b0d62f0497e06 *man/combine.Rd
6416a1667512dc36a6a009d3c5226a46 *man/combine.sub.Rd
1d658ac041cb4c5e751ccacaa2f5631d *man/create.PSCN.Rd
766150042e00c99a369e9f2561957e48 *man/createHyper.Rd
9051f7da958eb1e2b35bd2a8efb05ce1 *man/event.summary.Rd
b2942ed8b3244148f67cec6d24b40daa *man/getmusigma.Rd
7edff8fc1dfa453ee27e2e8fc02df957 *man/group.number.Rd
6687e9b628cec213ffc1288d1c5365d2 *man/illumina.getAB.Rd
da67759fd503876f7920423f25aa106e *man/illumina.getlogRbfreq.Rd
51dd8de7d090162552f38ebdde04a9fb *man/initialHyper.PSCN.Rd
af5d06bfc718ace85202e92dbf63026f *man/initialmixstate.Rd
812883a3b2dd3c054e6375e471005146 *man/length.PSCN.Rd
31a11b33b8d2a8ebc44c7800c2d2b3e7 *man/normal.comp.Rd
8dd4b13ad004298be2a0c79148805b73 *man/plotsub.Rd
7a40a9e36fe7c964bbd62895de4057c9 *man/print.PSCN.Rd
a14d567ba4d74cbf7c98c866e737d98d *man/printHyper.Rd
9e569ef9405d63728352c45a163fd90c *man/pscn.plot.Rd
11e24ed2d2708480f5b92c2afa707cdb *man/pscnlist.Rd
04dd30ed2e9e0f14d431924139acbe6e *man/readHyper.Rd
4789457c539136ed6fc1fe0f2cfbf8ba *man/regroup.theta.Rd
87db505d55c8626768c7fc9b58fb8f0a *man/segment.Rd
790978f023fb1d6d3bd1054ed9ddacf8 *man/segment.sub.Rd
da6fb5a404fd2744d5d6174af1ace442 *man/segmentation.Rd
ad85627f2be8acdda72965b987933fed *man/smooth.PSCN.Rd
6008c4c888a173f57d1ad516569cba3e *man/smoothing.Rd
ddb94fdb217fbda0275c60872c08b545 *src/Library/JAMA_C/download_jama102document.zip
b752ba3cc513a09e30d9e2a3686dc4c2 *src/Library/JAMA_C/download_jama124src.zip
82e2f11db6b4514138c19ef0cc59e70e *src/Library/JAMA_C/jama_eig.h
04fcbc47b6cf068cc9a3bf4878efbb2a *src/Library/JAMA_C/jama_qr.h
30f5f5edebbd65c949ccbddbf5dc5670 *src/Library/JAMA_C/jama_svd.h
490f602ce6be566a8d04839e6845cf14 *src/Library/JAMA_C/my_jama_cholesky.h
c5beae43b57aa1b8f3e53dc51f2b1167 *src/Library/JAMA_C/my_jama_lu.h
7a1ca8b11da3c37af89b780388467757 *src/Library/MyFun/myFun.bak.h
5919ad8f233441a082672bd09f50fd6d *src/Library/MyFun/myFun.h
8d3f6d43c75d880f3537cba23b6b7e12 *src/Library/MyFun/myFun_IO.h
e915b4e35777df967723a08c54d4907b *src/Library/MyFun/myFun_math.h
d899c309e21dc78716c9137413c92bf7 *src/Library/MyFun/myFun_matrix.h
2c5ea502a7571aab0f5df90c88a5c575 *src/Library/TNT/tnt.h
2ffcbaa7b6e7b4c9ed87d24c7570108f *src/Library/TNT/tnt120document.zip
eba125ff58bdb8a688998ddf2b4482f8 *src/Library/TNT/tnt_array1d.h
cabd4489ecf17e69b1aacd16da82b0e2 *src/Library/TNT/tnt_array1d_utils.h
4e31238b2f191d08b6aab12219bc21fe *src/Library/TNT/tnt_array2d.h
d869acbacdd3437761ff3275e39b2139 *src/Library/TNT/tnt_array2d_utils.h
dced5b32b9b136d34f63a617cb8c5ec4 *src/Library/TNT/tnt_array3d.h
6a88757649eb3fd5a801036b9735bf8a *src/Library/TNT/tnt_array3d_utils.h
7bddd3d185890a784ab863ebca13bffe *src/Library/TNT/tnt_cmat.h
fad7edf406744e056184780fb25e94a0 *src/Library/TNT/tnt_fortran_array1d.h
5a94f1633fe61c3ab0a8bbbc81d40441 *src/Library/TNT/tnt_fortran_array1d_utils.h
bd13140def59129df8bab92df6245bbc *src/Library/TNT/tnt_fortran_array2d.h
97d5ccde5adbd434f9548b307f39bee7 *src/Library/TNT/tnt_fortran_array2d_utils.h
9c6aaa6ef6c49668bca3f892ce1fb459 *src/Library/TNT/tnt_fortran_array3d.h
27d9c3108b4dc602fd3198fff37452b8 *src/Library/TNT/tnt_fortran_array3d_utils.h
21115e6221b349534c4aeff34a02116a *src/Library/TNT/tnt_i_refvec.h
f99fa4e430a2c4c0e26410f7a0282efa *src/Library/TNT/tnt_math_utils.h
15e87a17a420452254c5575f9ab9c961 *src/Library/TNT/tnt_sparse_matrix_csr.h
7a2cd759e9c0b4e630e31ed4183286d1 *src/Library/TNT/tnt_stopwatch.h
616fd2cf8dcf8640e84f2f493043aa21 *src/Library/TNT/tnt_subscript.h
c8aac7a43ea2164473ed4c6cbe5b01ac *src/Library/TNT/tnt_vec.h
c1836816b8636f65842b7e942ac8adde *src/Library/TNT/tnt_version.h
a00ab52f87e4e2a8e7bd8ff18c59ed67 *src/cnv2d.cpp
