d1d1dc44b47cf4a87fd46cba130d9785 *DESCRIPTION
2779dd14618c45d2eb71ed9de61236ae *NAMESPACE
bb0c84969d028c7f91a5fdf9da6b93b5 *NEWS.md
72e21d027fee1d5044016232dadda26a *R/AllClasses.R
96631263c1ab21f4c53a06c13b977653 *R/AllGenerics.R
2ba3fed144527c712fdb1c163a8793f9 *R/SpatialDDLS.R
5c7ee4179de69faa013d497870c050cf *R/dnnModel.R
0aba3c1b2a2e2acced02218fc3cf9555 *R/evalMetrics.R
c6df1555d4844f2a416a503b8fa6630b *R/interGradientsDL.R
37a3323a66ce066ba05fce6a2fd11e4f *R/loadData.R
5b45e69c2ea3e5f6f5748eacffcf2506 *R/plotSpatialCoor.R
d08e990ac5cf2601eb10175c6c016a19 *R/simMixedSpots.R
e8897964a238e7fed8ca6091d0c0f006 *R/simSingleCell.R
32885c5f331665460c4a89ff22545fab *R/spatialClustering.R
a4ccf7e8a4d8b0cc2ceb1f0401b27607 *R/utils.R
0b6d920f8b647206603d0adc64ccfcb9 *README.md
8faf250d78a120ba4c7ea2186efddd24 *build/partial.rdb
4b726fabd43abf26534966de0de77c6f *build/vignette.rds
e740144c3f1b818513a9098ee1ba847e *inst/doc/realModelExample.Rmd
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ad6901cc6164adf9f47dbf1f12bd0305 *man/PropCellTypes-class.Rd
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a9a53d2148a07d99e4c5d9b71e98d842 *man/SpatialDDLS-class.Rd
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96a6cc87d146f293f99189ef3b76aeba *man/barErrorPlot.Rd
95233f7f791807ebd6f4aa0453ee6de3 *man/barPlotCellTypes.Rd
53b857b2e453f1a6ee389e7b53256b2e *man/blandAltmanLehPlot.Rd
c0ea09d811a79ea70fcb4d51e009fa1d *man/calculateEvalMetrics.Rd
d2d32302b8d415b412a0d632f70fff52 *man/cell.names.Rd
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16fe8a6639d46a60c5d18a68fa7f2298 *man/corrExpPredPlot.Rd
50b96e75f6d3256903bc1d6323ea001e *man/createSpatialDDLSobject.Rd
65fd309d382c33ba4cdc12cf317034cc *man/deconv.spots.Rd
8baaa6bfed16b04c3d63f91bfb55b280 *man/deconvSpatialDDLS.Rd
2de9de4f976dd655ff844e440f1b4b83 *man/distErrorPlot.Rd
37e9c6ab13472d109264bd7b8e0ffcd4 *man/estimateZinbwaveParams.Rd
2787f7a3ba76dc63b20686a13d1238f9 *man/features.Rd
a56464e41df96380c47d38fc418c25c1 *man/figures/logo.png
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b6aabecc9928e8ee756386141b85171f *man/genMixedCellProp.Rd
86ca2482c258d55a8fd9a396280b7cd6 *man/getProbMatrix.Rd
6c8b8d69ae6e7a991f7339ef1775377a *man/installTFpython.Rd
6c8317742ba9bc804967cbc56d69db0e *man/interGradientsDL.Rd
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01b9ecdfb11472527507ce85fd48660f *man/loadTrainedModelFromH5.Rd
7d7f831a13208eb6cddd490e7ffd0f9d *man/method.Rd
a8aca198c75ade1503423d1150a343cb *man/mixed.profiles.Rd
d654c6c5bdd751e42f587ffa985eea7a *man/model.Rd
158de74f9d5b9ab2fc02415049d64f84 *man/plotDistances.Rd
a6fc054cf3db0ea59289c5e854e4712e *man/plotHeatmapGradsAgg.Rd
3f89b230b7889087d2afe65e374bb6ae *man/plotSpatialClustering.Rd
07331effc3d82aa6b4d73df39336dcc3 *man/plotSpatialGeneExpr.Rd
afe52c7dce7b9f54dd424ab25ab23652 *man/plotSpatialProp.Rd
6d81d13eba34df68b6c6f0fdb050e2aa *man/plotSpatialPropAll.Rd
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757beafea680db7f10f772c7d01cd6e3 *man/plots.Rd
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af8aec9e4e162384bcd5fb73cd8524cf *man/prob.cell.types.Rd
815824e311cec5f4a20efc699bc88d9d *man/prob.matrix.Rd
4642889da2fbbe2abada43bcbbb7316e *man/project.Rd
2309c58f1a1f2c6efbdaa66ec5081fec *man/saveRDS.Rd
7e278f962654d535d4b3f0bc7ed21cc3 *man/saveTrainedModelAsH5.Rd
4c3092f772e07d5bee9e2ae38d4c358d *man/set.Rd
362883c8f334a5dc19d3fc7342514c96 *man/set.list.Rd
6bf3add83019156c717bf7884429cd5e *man/showProbPlot.Rd
e36a4b2267224fafd96c38bc38cbc684 *man/simMixedProfiles.Rd
4e85fff693135026192563641998fb8b *man/simSCProfiles.Rd
3f0f98ad34f31468407d8c0d3a864d83 *man/single.cell.real.Rd
615fba5eff3ab1521057a2fb86e56740 *man/single.cell.simul.Rd
75e4ddc4f39964d30cb5c754260ba17c *man/spatial.experiments.Rd
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8ff33f78f0bc14ce523d06f1382bcb6b *man/test.deconv.metrics.Rd
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c8e82d2ace6500422e2681fdd7cb2ad3 *man/topGradientsCellType.Rd
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8a18f37692ab4cc82d344b1c1b3846f2 *tests/testdata/sparse_data/barcodes.tsv
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7c0895c05c1265ff6cc0f7fc79ebc155 *tests/testdata/sparse_data/matrix.mtx
c1d54d932aa91ff66c2b918edec82e43 *tests/testthat.R
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ce4200ad37d03895f973909d0ced22c4 *tests/testthat/test_plotSpatialCoor.R
f8122ec63c312c95dca550f10fe7beb5 *tests/testthat/test_simMixedSpots.R
83bfc662b37fd28269e481d7a7cb0254 *tests/testthat/test_simSingleCell.R
4889583c4c15bc4ce326831db227cecd *tests/testthat/test_utils.R
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26bbbd0f1b84d55976893b917cb12eca *vignettes/distances-1.png
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e740144c3f1b818513a9098ee1ba847e *vignettes/realModelExample.Rmd
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551599490bdeaebf7422d67590bbd1e2 *vignettes/references.bib
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ce67eea093cea81516b89b4851d17981 *vignettes/zscores-1.png
