% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/create_sub_module_sample.R
\name{create_sub_module_sample}
\alias{create_sub_module_sample}
\title{Create and Export Pathway-Specific Module Sample Files}
\usage{
create_sub_module_sample(
  pathway_infor,
  Module_Sample_scale,
  out_DIR_Module_Sample_by_pathway,
  plus_scale_method,
  comma_scale_method
)
}
\arguments{
\item{pathway_infor}{Data frame containing pathway information, see examples.}

\item{Module_Sample_scale}{Data frame containing scaled module sample data with
module names as row names}

\item{out_DIR_Module_Sample_by_pathway}{Character string specifying output directory}

\item{plus_scale_method}{Scaling method for plus-separated KOs ("mean", "min", or "max")}

\item{comma_scale_method}{Scaling method for comma-separated KOs ("sum" or "max")}
}
\value{
None (writes files to disk)
}
\description{
Processes pathway information and module sample data to create and export
individual pathway-specific files containing scaled module data.
}
