Package: sicegar
Type: Package
Title: Analysis of Single-Cell Viral Growth Curves
Version: 0.1
Date: 2017-03-17
Authors@R: c( person("M. Umut", "Caglar", role = c("aut", "cre"), email =
    "umut.caglar@gmail.com"), person("Claus O.", "Wilke", role = c("aut"), email =
    "wilke@austin.utexas.edu") )
Description: Classifies time course fluorescence data of viral growth. The package categorize time course data into one of four categories, "ambiguous", "no signal", "sigmoidal", and "double sigmoidal" by fitting a series of mathematical models to the data. The origin of the package name came from "SIngle CEll Growth Analysis in R".
URL: https://github.com/wilkelab/sicegar
Imports: dplyr, minpack.lm, fBasics, ggplot2, stats
License: GPL-2 | GPL-3
LazyData: true
Suggests: knitr
VignetteBuilder: knitr
BugReports: https://github.com/wilkelab/sicegar/issues
Collate: 'categorize.R' 'mainFunctions.R' 'lineFitFunctions.R'
        'sigmoidalFitFunctions.R' 'doublesigmoidalFitFunctions.R'
        'normalizationFunction.R' 'sicegar.R' 'dataInputCheck.R'
        'numericalReCalculation.R' 'generateFigures.R'
RoxygenNote: 5.0.1
NeedsCompilation: no
Packaged: 2017-03-19 04:59:38 UTC; umut
Author: M. Umut Caglar [aut, cre],
  Claus O. Wilke [aut]
Maintainer: M. Umut Caglar <umut.caglar@gmail.com>
Repository: CRAN
Date/Publication: 2017-03-19 11:39:19 UTC
