# Generated by roxygen2: do not edit by hand

S3method(sig_prepare,CopyNumber)
S3method(sig_prepare,MAF)
S3method(subset,CopyNumber)
export("%>%")
export(CopyNumber)
export(GenomicVariation)
export(MAF)
export(draw_cn_components)
export(draw_cn_distribution)
export(draw_cn_features)
export(draw_sig_activity)
export(draw_sig_corrplot)
export(draw_sig_profile)
export(draw_subtypes_comparison)
export(get_ArmLocation)
export(get_LengthFraction)
export(get_cnlist)
export(get_cnsummary_sample)
export(get_components)
export(get_features)
export(get_matrix)
export(hello)
export(prepare_copynumber)
export(read_copynumber)
export(read_maf)
export(read_variation)
export(sig_assign_samples)
export(sig_estimate)
export(sig_extract)
export(sig_get_activity)
export(sig_get_correlation)
export(sig_get_similarity)
export(sig_prepare)
export(sig_summarize_subtypes)
export(test_run_components)
exportClasses(CopyNumber)
exportClasses(GenomicVariation)
exportClasses(MAF)
import(NMF)
import(cluster)
import(data.table)
import(foreach)
import(ggplot2)
import(methods)
importClassesFrom(flexmix,FLXcontrol)
importFrom(dplyr,progress_estimated)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grDevices,rainbow)
importFrom(magrittr,"%>%")
importFrom(purrr,pmap_df)
importFrom(utils,data)
importFrom(utils,download.file)
importFrom(utils,str)
