Package: yCrypticRNAs
Type: Package
Title: Cryptic Transcription Analysis in Yeast
Version: 0.99.0
Author: Nicole Uwimana, Benjamin Haibe-Kains, Francois Robert
Maintainer: Nicole Uwimana <nicole.uwimana@gmail.com>
Description: Calculates cryptic scores for genes using the ratio 
	(Cheung et al., 2008), the 3' enrichment method 
	(DeGennaro et al., 2013) and the probabilistic
	method. It also provide	methods to estimates
	cryptic transcription start sites.
Depends: R (>= 3.1.0)
URL: https://bitbucket.org/nuwimana/ycrypticrnas
BugReports: https://bitbucket.org/nuwimana/ycrypticrnas/issues
License: GPL-2
LazyData: true
Imports: parallel, mclust, MESS, data.table, biomaRt, Rcpp, Rsamtools,
        IRanges
Suggests: knitr, testthat, rmarkdown
VignetteBuilder: knitr
LinkingTo: Rcpp
RoxygenNote: 5.0.0
NeedsCompilation: yes
Packaged: 2015-12-10 01:12:04 UTC; nuwimana
Repository: CRAN
Date/Publication: 2015-12-11 13:31:12
