c06dc241f2333f5c46e8f6217d963346 *CHANGELOG
c99043a69d6464fab5ddfb6ecadb5f5e *DESCRIPTION
44e05556ece507d531ad5b5946cbf01f *NAMESPACE
291846bd3a17e5e847d2700173eca460 *R/HaDeX-package.R
c24073e5ceb2abbe74e512ace2c79fa8 *R/HaDeX_gui.R
c2bd40578d52ab29ca37571991eb7b96 *R/add_stat_dependency.R
50e48c2693021abf8559bc19d8f3776e *R/calculate_confidence_limit_values.R
f559800dbbd492a985b1b37e0412ca40 *R/calculate_kinetics.R
bb2b38a530318300afb6b958d043c331 *R/calculate_state_deuteration.R
02f00b29190e5193af428322def215d5 *R/comparison_plot.R
4e264869e179812c9a48e5fc8854b1d5 *R/plot_coverage.R
d39e0e2db669b8dc7a3d2e2250b65728 *R/plot_kinetics.R
91d106a0a54b7bd8debd5084a16dbe4e *R/plot_position_frequency.R
9ff42a1efe7df779b4e6ea8b882ca2bc *R/prepare_dataset.R
f97c01939f000fda99e43278d1d3e8b7 *R/quality_control.R
325cdd08004d2edf3c9e374cf7c08bae *R/read_hdx.R
213bab15ca9ba88fd95809518ad46368 *R/reconstruct_sequence.R
c70ad463c06981cb1e68db4a30d4adb1 *R/woods_plot.R
063ab83da1667c6f18e1e24d1662b89b *README.md
661f97a596746239843f9ac9a0329927 *build/vignette.rds
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877154d822f00d9b3f08dd30649fbc2b *inst/HaDeX/readmes/about.md
2993acaaefe4abf120803b68c68f8055 *inst/HaDeX/readmes/summary.md
2c388113284cab992750c537b70b08d1 *inst/HaDeX/report_template.Rmd
c2848f6de6eb041d719d6497f88f493f *inst/HaDeX/server.R
c84f4067b47d0799d21ed80cdb71b683 *inst/HaDeX/ui.R
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9a2cb5ba09e39128caf5787d16846242 *inst/WORDLIST
9c8a8f3a9577894351a30e9b8639e2a4 *inst/doc/overview.R
ef14c93a286b89a8347dcdaf6a8aa35d *inst/doc/overview.Rmd
dc70f31802ee577694faa52b9c0e4e48 *inst/doc/overview.html
d2a0e8befaf7d2270f2ac298e0153cbd *man/HaDeX-package.Rd
15c54755a5e6dc246027fad9d1ab8191 *man/HaDeX_gui.Rd
fcb880eaa597e093ca1a826f777fac0e *man/add_stat_dependency.Rd
edd7668da7978320754abd50bb54d97e *man/calculate_confidence_limit_values.Rd
e4d5121787fd05f841be93b5981b65ee *man/calculate_kinetics.Rd
d80162011cab879f204a395af333a7a5 *man/calculate_state_deuteration.Rd
744986148c0ecdb192051892ba64d3f8 *man/comparison_plot.Rd
f58adcb04604a717a636a4c692927cf7 *man/plot_coverage.Rd
4918f73aca538c2381c455a07ea9988b *man/plot_kinetics.Rd
964664a5b68d9b30afce7c93fad69bcb *man/plot_position_frequency.Rd
b6f49fe6741b92b61c17c00ea3ff1ac5 *man/prepare_dataset.Rd
db4d386d9843ed520c22b5c6acf8b531 *man/quality_control.Rd
d15897cef2adb1b2d9bb3d8c671946ba *man/read_hdx.Rd
5f53b207888bd48221c2b6c69cd459c9 *man/reconstruct_sequence.Rd
663454fd98ad270fd7cfeb08f399cf2c *man/woods_plot.Rd
755317add6aa367d878ac24783bd33cf *tests/figs/comparison-plot-in-test/comparison-plot-1.svg
a418b1296a104e253968e57788288099 *tests/figs/comparison-plot-in-test/comparison-plot-2.svg
8ef0157e4c826da8c28a91b1ea420b30 *tests/figs/deps.txt
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40da883fff1961567bb973b86ecd93be *tests/figs/plot-position-frequency-in-test/position-frequency-plot-1.svg
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452be7c5ce33ba2e39a30ee7aeed99f6 *tests/figs/woods-plot-in-test/woods-plot-2.svg
332173f20d20942c02019350ea4dcadc *tests/spelling.R
4aa1241135434441bfd8871a534a52b7 *tests/testthat.R
5a5260f3b7ba1ff567fc46787ae72621 *tests/testthat/test_add_stat_dependency.R
6b7acb814239b13cced1baa0508ad7d1 *tests/testthat/test_calculate_confidence_limit_values.R
075f845e14a0e15e126ab24cf04335d4 *tests/testthat/test_calculate_state_deuteration.R
1a252935183f606920b58411bf761f07 *tests/testthat/test_comparison_plot.R
35c6c3f143f2c29033adf0e666d5a20e *tests/testthat/test_plot_coverage.R
909b60a6660842aa7333ee3ffab860ed *tests/testthat/test_plot_position_frequency.R
27332ffc5c7289670446dbce4ed2ce3e *tests/testthat/test_quality_control.R
58a64c8ccbd04fb322a6d5d0279578e6 *tests/testthat/test_read_hdx.R
c7afd3b272f88c00dbd96fca95486432 *tests/testthat/test_reconstruct_sequence.R
48e9de86c25c59ff17bcde57b663aab3 *tests/testthat/test_woods_plot.R
1d7df680cd6798d28993a406fd0150e8 *vignettes/HDX.bib
5776ec7e33ef0ce05261554481e4e204 *vignettes/comparison.csv
ef14c93a286b89a8347dcdaf6a8aa35d *vignettes/overview.Rmd
