35cd216354a302e1414639f1316461b8 *ChangeLog
9b77a108d4521b41cedd8da922e0c05f *DESCRIPTION
e4a6893dc7bb08a976828750d4ca17da *NAMESPACE
8869f2cdcf5f62d318ac500ee79b022d *R/NetRep.R
d216afc13a2dc262e2981f9708814965 *R/RcppExports.R
d50cf1ac54dfbeb8e61aec17f92d3b70 *R/bigMatrix.R
02f9204ebdf455e2bb0239076269e1f1 *R/check-user-input.R
e8ccbc57f669d14835ce88287a7452e0 *R/contingency.R
d9fef7660744be1b971d1168eb79d87d *R/disk-matrix-class.R
6ff44718169e4ee23b99c335ed84feeb *R/example-data.R
a34fb3ebd8e041fb8d52ed428e287576 *R/modulePreservation.R
2ee61393ef7b76b8e081d60b0f91c7e1 *R/multi-machine.R
59bf68baa19cc9100f3bc1ec5fcfd88c *R/networkProperties.R
d901012c1d2f16958b135fd323bfdb8d *R/orderNodes.R
f756acd80f2fb6779774b93a88a5cab3 *R/orderSamples.R
6c9a97883bfe7cac9e6001aa1cd38dc6 *R/plot-functions.R
793b46a54c11f974dc1e723012b38472 *R/plot-module.R
2e71061e2cab1b5b6bea4751760bd8fd *R/plot-topology.R
61c3fef01fb35eb0400412f867baa4d8 *R/plot-utils.R
4ac97972d2f4256548ac693286ed8610 *R/pperm.R
e6e5d8a12ec7db11b20ab226b500eb3f *R/roxygen-defs.R
8160e52c53531fe29eb2f5bdfc8a6040 *R/utils.R
bf97a9af2f89a1c640f38a8ed50b3b05 *README.md
8a9675f341f1ad27f3dd0396e07905ef *build/vignette.rds
8a3c7054b51a4ab390a3ca46304bfaa1 *data/NetRep.rda
c536bd1266cb482784e444933a92c77e *inst/CITATION
6b8262818a3f0540bf9d17fae0904f11 *inst/doc/NetRep.R
efe36230b7db6f9ebb53941866ec2d18 *inst/doc/NetRep.Rmd
76a7da1eaa8f9c9ec76c5a3d8f64394e *inst/doc/NetRep.html
1fd6e4d8ae4961ad95340c2b5f652a24 *man/NetRep.Rd
50bf9dae396ceb8109f7969e98783d81 *man/bigMatrix.Rd
8cb8941337cf616b857963458ce87371 *man/combineAnalyses.Rd
b034a8dfc5e486c9efa5e53fedd6fbfe *man/common_params.Rd
cb22cd540ca518f132c376c979621ebc *man/disk.matrix.Rd
ac27a6c749a6652997c19db045abf014 *man/example-data.Rd
f9bed267879453fb3bccf75743d61426 *man/modulePreservation.Rd
69ba205b75443d4c01a634485aad2031 *man/networkProperties.Rd
3c26d184562537311708399365041f52 *man/nodeOrder.Rd
e3c29dd02d47e4b8283b5112721cfc4c *man/orderModules_param.Rd
54d7c513d6d33d62ead6348f54728497 *man/permutationTest.Rd
df26c6ed63e1f091e37e168a194cd606 *man/plotModule.Rd
871fa3c582b891c29ade8f0dedf1e4f6 *man/plotTopology.Rd
1824c4a544344d914b632cc30bec445f *man/plot_params.Rd
d855a65350a12ec3a9993f5836145432 *man/requiredPerms.Rd
89a56c9f0684e5fd3d80a7a43133a00f *man/sampleOrder.Rd
664decaf5fb8e07a28654c5ca8063e2a *man/simplify_param.Rd
fdcb2e0c2502ed804ae55e75cf88055c *src/Makevars
fdcb2e0c2502ed804ae55e75cf88055c *src/Makevars.win
9fcbdddc4b01eda5628b31e1b3d7b75d *src/NetRep_types.h
afd1a42d899e64c6d8cb1c416bf9c6cb *src/RcppExports.cpp
ac9f25f2191ff55f640b26bf9cbabdda *src/checkFinite.cpp
576cf9c3c2022925d56b01cb2ba8f3ca *src/discProps.cpp
fea2deb022e6771e9096c8da7770bf3a *src/interrupt.cpp
b275203aad5cbe5b79337814ea751e28 *src/interrupt.h
5a3f6034b5f3ec518819a732b5f6b73f *src/netStats.cpp
abbda371d8ff76eb2e503430596e6520 *src/netStats.h
1984633bbbecb3135d56912cef567ece *src/permutations.cpp
68b8b5a37610bcb02f36345ee7a52688 *src/permutationsNoData.cpp
3bc483d4f973c9db30b6dc4be162f2f5 *src/properties.cpp
ee90ebaebd6e9a9ac685673ca128384f *src/scale.cpp
7b132348bdc16c5ac0fc7271e4506d13 *src/scale.h
2585a6d8195bca7e4ee7d7b2542fd9bd *src/thread-utils.cpp
9fa9e24cd399bc1dc985f77be42c8471 *src/thread-utils.h
e232fac9d7ae77f20a0ea7bb43c00596 *src/utils.cpp
ef1f693981c63a626e738d85cb2b28de *src/utils.h
f6b3cf86c7bb8bb6b1d852e5d1bbbad6 *tests/testthat.R
3fdc40d64c491de9516641448eb5070c *tests/testthat/test1-main.R
b5cc0f94e90139c06fa0ea8c4859f734 *tests/testthat/test2-downstream-analysis.R
efe36230b7db6f9ebb53941866ec2d18 *vignettes/NetRep.Rmd
619655cb18040df60b60b5a622b4fffc *vignettes/NetRep_files/figure-html/correlation_heatmap-1.png
1fd7ad831a4001def1ae868cda92de40 *vignettes/NetRep_files/figure-html/disk_matrix_dry_run-1.png
05d3ebef1b69ed9bc1418531951b5ad0 *vignettes/NetRep_files/figure-html/disk_matrix_plot-1.png
1fd7ad831a4001def1ae868cda92de40 *vignettes/NetRep_files/figure-html/dry_run-1.png
55070e3cbe6a66b2d215869ba1c4b83d *vignettes/NetRep_files/figure-html/dry_run_customised-1.png
a78238634c44bc3975d324f35091312f *vignettes/NetRep_files/figure-html/mean_degree-1.png
4e69567b66b19f29bd2ce0a44db6a842 *vignettes/NetRep_files/figure-html/mean_degree_customised-1.png
1b8754e14062baa92e7b26f5754c2b1d *vignettes/NetRep_files/figure-html/modules_in_discovery-1.png
b44982df42a25a53539b6f0feed36216 *vignettes/NetRep_files/figure-html/modules_in_test-1.png
9dc05ca81c5b210607e3a2c73aa129ee *vignettes/NetRep_files/img/mod1.png
93db53ba2031d5e73348ad7131d4b505 *vignettes/NetRep_files/img/preservation.png
