c72382e512af8c0abb5fdd129acd75b8 *DESCRIPTION
6f4e2ccfdfed76c726506367d840e42d *NAMESPACE
7e576957f04d4fa0ec5fa5487c7a5fc6 *NEWS.md
4e2f427722bb59ae681270a480f6738b *R/adjclust.R
d8528b56095bcb847d00096c313c3dd2 *R/buildHeap.R
15e43f2ad143ff1a9058085d74b4cde6 *R/chac.R
724d3beb652e3932076d96c0f7c20d5c *R/helpers.R
3a0fb6a7cd6859a428a256dc675ec515 *R/hicClust.R
f6180e37c4fca8fdceb5f573fd53fc80 *R/plotSim.R
a792d9b057d8234e40603a684b1e05d5 *R/res_adjclust_0.3.0.R
54e6c1d133ca5a364bb62806954ee01a *R/snpClust.R
327f325af7abfdb5a0bc438f2c6e8fe1 *README.md
ce61db7201cc7d9727be21b610665271 *build/vignette.rds
d35fd6b35cdb510465a49e72d7301b6d *data/res_adjclust_0.3.0.rda
e776d065e57fbdb57e09f4cc88c052c7 *inst/doc/hicClust.R
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dd6726c6c4b30f3cea804183395128eb *inst/extdata/hic_imr90_40_XX.rda
bd492a22b4201740430f97be6b6c45fe *inst/extdata/sample.txt
abe469addd68c05b93241b7ddf51ab7f *inst/system/createExampleLDData.R
8a7f67643f909f889d8f2efcf825ca00 *inst/system/create_hic_chrXchrX.R
ab247bcc85e5b115f6bb89fbde548770 *inst/system/create_prevfit.R
e7d10b0f5d6f28db078a4c1861b1032a *man/adjClust.Rd
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3ed8e614783e5901a9881615936d3d0b *man/hicClust.Rd
798e33a4765f89ad39b5e78c073d4302 *man/plotSim.Rd
aacd867cec0b75229cf73ff80a611e4b *man/res_adjclust_0.3.0.Rd
042a76afee52dc74a54ccbe2b45e3781 *man/select.Rd
6fcb32929007b8720337975ff0045f83 *man/snpClust.Rd
18cc7f742ac241454e9304dec5b2a992 *src/init.c
6d5fc09b353b9419b5a16dd7bec849ef *src/mainFunctions.c
4543c7812c549c8a643d02ecafc49922 *tests/testthat.R
60ebfae526b756cb16177880c5ec923c *tests/testthat/test_adjclust_equivalentTo_hclust.R
a4c3cf091085dbde0fe8f8d4b7802b49 *tests/testthat/test_adjclust_equivalentTo_rioja.R
ef077a64b5539333537c6a5135151cee *tests/testthat/test_ascendingCompatibility.R
50890608af7eaa7761a1d9efe54ea345 *tests/testthat/test_correct.R
fa543492bedb98ec315e98b317f285c4 *tests/testthat/test_corrected_plot.R
7f6efa9db99558f1daa722931ced761c *tests/testthat/test_cuttree.R
8c5cc3df79ef094c08e65f1394426cdd *tests/testthat/test_dense_sparse_comparison.R
9b2f0669edd88e5c6b293049591e0648 *tests/testthat/test_final_height.R
47be43fb387eff30329bf9145597fa8c *tests/testthat/test_hicClust.R
4826d53a15ac23626822a9ca4db4711d *tests/testthat/test_modify.R
af1a461d50d77732520627ad05b3670f *tests/testthat/test_plotSim.R
9b66bf636b6e88e9f59ecbcb6e882d6c *tests/testthat/test_similarity_equivalentTo_dissimilarity.R
7ef3f5b76202a5745a3fda5916a74c12 *tests/testthat/test_snpClust.R
1c6cc62e2f720ee9e4909215fd02fb44 *tests/testthat/test_snpClust_NA-in-LD.R
54de6942a25f58ddaf55fcf0d7a851d3 *tests/testthat/test_warning_with_decreasing_height_plots.R
4cd6a4446bdc1bbcd0ef457356fc4862 *vignettes/hicClust.Rmd
f580a3d56074ab2aef3a875c8fa05dcc *vignettes/notesCHAC.Rmd
a20325999e966323288f9f4c35d23c2b *vignettes/snpClust.Rmd
