a0cc62970311ed6a54cabbe4c515300d *DESCRIPTION
0a5e48e774469979d8eecbdd8bfa0db1 *NAMESPACE
56624b7817f3ebbd1fbe6896cbc802a7 *NEWS
71c68632686b2d168a57741e825d1a16 *R/HMMplot.R
b2d1b46f845b84de93414ca3bbcd5bec *R/RcppExports.R
08736d3b8f2bf54729dad9ebc2aaee65 *R/SSPlotter.R
165a02f81c29866de258f8e32e010ec9 *R/biofam3c.R
3a2a8b7de23ba1175a6eb337aef5bdaa *R/build_hmm.R
561d88246825e9b67d9640909ef55062 *R/build_lcm.R
365eeec76d214ede69f9c106e769867a *R/build_mhmm.R
9bd57c03c6ba3072ef78e6e41e014ec6 *R/build_mm.R
fe2c1ca1f08f213fc8c7271a7233eee8 *R/build_mmm.R
2c91f9351528a769c7f9005ed9c1f787 *R/colorpalette.R
c501731291a9aa14d341e60442cbe0fd *R/combine_models.R
a4fbc88a22376f6531f49f3b5cddd106 *R/fit_model.R
3e4f25bb9c656f1ea2a8446ba7806ad0 *R/forwardBackward.R
9fe28aeecba402d1898228c458c4a761 *R/gridplot.R
8d800a6c42660ef5718e86a9ff168b04 *R/help_data.R
84b1dc0d781bbe97b90734b26670bd07 *R/hidden_paths.R
e9a202767bc83aebed76a38e87798dfe *R/hmm_biofam.R
ab2e784177d1d691fabad95439319d17 *R/hmm_mvad.R
496c8ac7809e2bac50d5a43cf376288e *R/import_seqdef.R
707cca9dfdea084fb6902fb026c1c5cb *R/isColor.R
a70385523cf2a6428faaba87240849d3 *R/logLik.hmm.R
f6d6e1ddb72f66ac43fd7a1d3c119a43 *R/logLik.mhmm.R
5e46c042356ea10d5297ca288d874faa *R/mHMMplotgrid.R
61eadb7af0f1315e4a5873d54c3d2d49 *R/mHMMplotint.R
1544c5762641f85216d4b3816d4d6171 *R/mc_to_sc.R
360c359f97d4f3bb0bf02e02676eccb1 *R/mc_to_sc_data.R
89f1419e0ef37d9650945d2199b16e0d *R/mhmm_biofam.R
725447d5fdbe0aac8f5144f053bd192b *R/mhmm_mvad.R
2a57cdca3887e98b5c3dba0d2ba2d0c8 *R/mssplot.R
29249393037930ae8a9b09cd62bffa1b *R/plot.hmm.R
fca2de08ac8bccd48e863d612c64a9b6 *R/plot.igraph2.R
b68998a83b77f50fbd5685820925a659 *R/plot.mhmm.R
f361a7fa651b1226720ac81616642a03 *R/plot.ssp.R
01aadc3edf15fa027e5786dc5a219cc7 *R/plot_colors.R
1554c0bc5270903ebf02e6477f87d3d2 *R/posterior_probs.R
1b34a268e69de66c179193c1d15896ab *R/print.hmm.R
bb251626065bd2b982524ff6fc10ae59 *R/print.mhmm.R
1ee30703cd7779651aecca4dcb10a181 *R/print.summary.mhmm.R
a767930b446b923205c951cf69b02f63 *R/separate_mhmm.R
3afdbcedddea2a60142d90f99511e0b0 *R/seqHMM-deprecated.R
7165ced500da7a57de57354197743d3f *R/seqHMM-package.R
6fad66ae95e49c7a9d6b9e21d798c545 *R/simulate_hmm.R
d969e245288c0d977cd880b147c99fb8 *R/simulate_mhmm.R
856b4af943a635538b39eb399e1b8185 *R/simulate_pars.R
d89f049fad615c06487b2f3ce9056d37 *R/spread_models.R
31f5ebdbea27e7d714c059f0bf7d6d5f *R/ssp.R
0d251e9b25308a6b5609dc210e5b0c0a *R/ssplot.R
d3f19ce9053be5f619642a38ef3624c6 *R/ssplotM.R
7d108a5c21c22f60d7b168026d6ebc37 *R/summary.mhmm.R
95f1a609fd6545dcdf9c17078a6f7e52 *R/trim_hmm.R
4bd40ef8c5276e4f83f604620fba481a *R/vcov.mhmm.R
9406599bfff823db597087b78c53a85e *build/vignette.rds
7c221b7bd624637ea21d07c8d886a79b *data/biofam3c.rda
40bc0aef12d73970fcf7e661a1c2fad6 *data/colorpalette.rda
c5033fae7c307364fe7c2e9abb3f0056 *data/hmm_biofam.rda
8ef95b6d76b5b569bad4cf7227144a39 *data/hmm_mvad.rda
dd24318a6a45ef2a41dde54cd2d7a5c8 *data/mhmm_biofam.rda
4c74302661259fe1a352329b9ec2a042 *data/mhmm_mvad.rda
c6a7c0d5c12946e5a033a6638d0d8d3d *inst/doc/seqHMM.R
2e8831c5890a526b0fcf8184cf6fd998 *inst/doc/seqHMM.Rnw
09d31fb51b986c907f155596df213592 *inst/doc/seqHMM.pdf
46f75d7481bc6baa52cf536690b4d2ea *man/TraMineR_imports.Rd
904eb3c4110f850fad97b82d5a1654d3 *man/biofam3c.Rd
230a6405938d861227183001b3abb6d8 *man/build_hmm.Rd
bbf0acb1ef3f927380ae59355a2c9bfc *man/build_lcm.Rd
5f41bf5662dd732de92080e87eb4c703 *man/build_mhmm.Rd
a55db728fbb4564ac87f0ad014839706 *man/build_mm.Rd
4f83c31ccbbdbec9a5599d126bb8fd8a *man/build_mmm.Rd
357f859321eee32f19cdd81b305a4fa4 *man/colorpalette.Rd
9cc0806ddac4036ca9a3dc88b5b6b3aa *man/fit_model.Rd
f046ea626bfa0253cbfac25d3fbb4461 *man/forward_backward.Rd
312dbc3b7d6980034d2b76fc6287c876 *man/gridplot.Rd
ca2080d544a43e12e66d9f654bdd1f95 *man/hidden_paths.Rd
4982eeeac5024b1dbc2ee51e49ec8e84 *man/hmm_biofam.Rd
a186c1abea107a303df9cf7b2ba11ceb *man/hmm_mvad.Rd
b25389ef3421da5f2161135084b31727 *man/logLik.hmm.Rd
ec9c7463c6dfff4b610adae762ff691b *man/logLik.mhmm.Rd
0dfde685e93c49cafd277bf3dd9684e9 *man/mc_to_sc.Rd
8b2cdec35795d95635dd5925b683ef9f *man/mc_to_sc_data.Rd
bce7613f7a461b1eecf894b7b6a50d80 *man/mhmm_biofam.Rd
ba6bd543c85747ee7add951817f908fe *man/mhmm_mvad.Rd
95314a8f74b07c8ed3a3c4ca96ea271e *man/mssplot.Rd
aa09efec6bcc752c72e33c065863bd10 *man/plot.hmm.Rd
5e8342dcfac5146c90670c775d2f1cbe *man/plot.mhmm.Rd
2a3dc142d91f48860f84527c22d9ac84 *man/plot.ssp.Rd
01aa3787f0ec26b4b044d64efedffe22 *man/plot_colors.Rd
88e5f89388a7b822a2d5c8e6a0cddc00 *man/posterior_probs.Rd
520c81a9020a80d611a723c12def971c *man/print.Rd
cf710d1ba65e4062877e92255b0a00a6 *man/separate_mhmm.Rd
56a2766a079e59413a291cd3c4848eb6 *man/seqHMM-deprecated.Rd
1028fa28dde1fb299a7fbf3c23028163 *man/seqHMM.Rd
186392d4c42a99a83dc5dfeaf9a777fb *man/simulate_hmm.Rd
e4eec1711e28f090c1db2161a2bbc6f9 *man/simulate_mhmm.Rd
558e48ba0f12027086c39a05b2214ba4 *man/simulate_pars.Rd
e67e3f4a85b2b8fcc6e1325b3a277e17 *man/ssp.Rd
64276df737f4cbeea751f9da0badf230 *man/ssplot.Rd
fe583ef51dec82b369851df6b302bfb7 *man/summary.mhmm.Rd
5d11851d97ee492e8d8e0b4805ed5010 *man/trim_model.Rd
490dc1c0fbbfbe7aad8d01bd385d2807 *man/vcov.mhmm.Rd
8ec06bb389158eb16c93bf86ceed361f *src/EM.cpp
1939b4beaea00a0d6849b7422cf2905c *src/EMx.cpp
9ae100fdd0b23ebcdaefe1704a0077ff *src/Makevars
71d4ef0b42bde94eef5e46cfaaa4bd79 *src/RcppExports.cpp
bb89f3d742d77c780cd5ecfb7a7628bc *src/forwardbackward.cpp
0370b14dd04f507521a9f25c9aa44036 *src/forwardbackwardx.cpp
08d30ba849a440f19ad6611d7922fcd0 *src/internalBackward.cpp
77c340d97e3949b6c3b90761d87d6cdd *src/internalForward.cpp
778ee608b670c97280e07fbf25812696 *src/logLikHMM.cpp
bc3eba9124daae000d5629921d36c1c5 *src/logLikMixHMM.cpp
96791a241beca3d939798b1881f52a82 *src/logSumExp.cpp
258b24ca40ddba2485bca9f95869eea8 *src/log_EM.cpp
beea36948a0a937f8388aaf09bb55c73 *src/log_EMx.cpp
697e497102f415ab9ceeee3fe2c36644 *src/log_forwardbackward.cpp
64f3134c08615a246a3716c3c07b3f7d *src/log_forwardbackwardx.cpp
d857c92b388db9408f61489f1166807f *src/log_internalBackward.cpp
be13be672e90a76c3e7229a80ce20e6b *src/log_internalForward.cpp
b3bef205702739aca05e7e8fa8baaed9 *src/log_logLikHMM.cpp
fba0560dd16749dbade118b7b336b9b1 *src/log_logLikMixHMM.cpp
6cee8f37f448b8ccfdb056c0a1e1bd6f *src/log_objective.cpp
83c68a29de85fcbe6a49d1de6135952d *src/log_objectivex.cpp
ae0f4b279344940f9d32fa4663de64e7 *src/log_optCoef.cpp
7eb7c97e475fd3f10736378639d330fa *src/objective.cpp
59a77c2023e03b32d90beed6bfe58b88 *src/objectivex.cpp
705226e532b28bb132e191a6cf1e1632 *src/optCoef.cpp
1ab1b744fd8db1f3cc171a9596175104 *src/reparma.cpp
54960d2859f7837500e7428c8d242ba1 *src/seqHMM.h
a5904e80f3ac42dbd234d397b9edbe0c *src/varcoef.cpp
5de50d4922bbe6214d890d2d3b604620 *src/viterbi.cpp
bcef1236fb556b9e9cfcbae7e796c0f8 *src/viterbix.cpp
54b15bf015c5ce0ab6ab9992ee5a48bb *vignettes/references.bib
2e8831c5890a526b0fcf8184cf6fd998 *vignettes/seqHMM.Rnw
