Utility Functions for 'CDMetaPOP'


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Documentation for package ‘cdmetapopR’ version 1.0.0

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age_structure_proportions Determine the proportions of the age structure of the population
allele_frequencies_ind Plot Individual-Level Allele Frequencies
cdmetapop_to_gene Convert CDMetaPOP data to GENEPOP or GENALEX format
create_cdmat Create cost distance matrix for CDMetaPOP simulation
heterozygosity_ind Plot Individual-Level Heterozygosity
launch_cdmetapop Function to facilitate the running of CDMetaPOP software from R
make_classvars Build ClassVars File from Template
make_patchvars Build PatchVars File from Template
make_popvars Build PopVars File from Template
make_runvars Build RunVars File from Template
pairwise_fst_ind Plot Pairwise FST Between Individual Groups
summary_class Plot CDMetaPOP Class Summary Dynamics
summary_dataframe Return CDMetaPOP Output Data as Data Frames
summary_disease Summarize CDMetaPOP Disease States
summary_ind Plot CDMetaPOP Individual File Summaries
summary_patch_map Map CDMetaPOP Patch Abundance
summary_pop Plot CDMetaPOP Population Summary Dynamics