# Compute, Handle, Plot and Model Incidence of Dated Events

## Documentation for package ‘incidence’ version 1.7.3

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Code demos. Use demo() to run them.

## Help Pages

"subset.incidence" | Subsetting 'incidence' objects
"[.incidence" | Subsetting 'incidence' objects
add_incidence_fit | Plot function for incidence objects
as.data.frame.incidence | Conversion of incidence objects
as.incidence | Conversion of incidence objects
as.incidence.data.frame | Conversion of incidence objects
as.incidence.matrix | Conversion of incidence objects
as.incidence.numeric | Conversion of incidence objects
bootstrap | Bootstrap incidence time series
cumulate | Compute cumulative 'incidence'
cumulate.default | Compute cumulative 'incidence'
cumulate.incidence | Compute cumulative 'incidence'
dim.incidence | Access various elements of an incidence object
estimate_peak | Estimate the peak date of an incidence curve using bootstrap
find_peak | Find the peak date of an incidence curve
fit | Fit exponential models to incidence data
fit_optim_split | Fit exponential models to incidence data
get_counts | Get counts from an incidence object
get_counts.incidence | Get counts from an incidence object
get_dates | Retrieve dates from an incidence object
get_dates.default | Retrieve dates from an incidence object
get_dates.incidence | Retrieve dates from an incidence object
get_fit | Accessors for 'incidence_fit' objects
get_fit.incidence_fit | Accessors for 'incidence_fit' objects
get_fit.incidence_fit_list | Accessors for 'incidence_fit' objects
get_info | Accessors for 'incidence_fit' objects
get_info.incidence_fit | Accessors for 'incidence_fit' objects
get_info.incidence_fit_list | Accessors for 'incidence_fit' objects
get_interval | Access various elements of an incidence object
get_interval.default | Access various elements of an incidence object
get_interval.incidence | Access various elements of an incidence object
get_n | Access various elements of an incidence object
get_n.default | Access various elements of an incidence object
get_n.incidence | Access various elements of an incidence object
get_timespan | Access various elements of an incidence object
get_timespan.default | Access various elements of an incidence object
get_timespan.incidence | Access various elements of an incidence object
group_names | extract and set group names
group_names.default | extract and set group names
group_names.incidence | extract and set group names
group_names<- | extract and set group names
group_names<-.default | extract and set group names
group_names<-.incidence | extract and set group names
incidence | Compute incidence of events from a vector of dates.
incidence.character | Compute incidence of events from a vector of dates.
incidence.Date | Compute incidence of events from a vector of dates.
incidence.default | Compute incidence of events from a vector of dates.
incidence.integer | Compute incidence of events from a vector of dates.
incidence.numeric | Compute incidence of events from a vector of dates.
incidence.POSIXt | Compute incidence of events from a vector of dates.
incidence_pal1 | Color palettes used in incidence
incidence_pal1_dark | Color palettes used in incidence
incidence_pal1_light | Color palettes used in incidence
make_breaks | Plot function for incidence objects
palettes | Color palettes used in incidence
plot.incidence | Plot function for incidence objects
plot.incidence_fit | Plot function for incidence objects
plot.incidence_fit_list | Plot function for incidence objects
pool | Pool 'incidence' across groups
print.incidence | Compute incidence of events from a vector of dates.
print.incidence_fit | Fit exponential models to incidence data
print.incidence_fit_list | Fit exponential models to incidence data
scale_x_incidence | Plot function for incidence objects
subset.incidence | Subsetting 'incidence' objects
[.incidence | Subsetting 'incidence' objects
`group_names<-`.default | extract and set group names