Package: pubmed.mineR
Type: Package
Title: Text Mining of PubMed Abstracts
Version: 1.0.21
Date: 2024-09-06
Authors@R: c(person(given = "Jyoti",
                      family = "Rani",
                      role = "aut"),
               person(family = "S.Ramachandran",
                      role = "aut"),
               person(given = c("Ab", "Rauf"),
                      family = "Shah",
                      role = "aut"),
               person(given = "S.",
                      family = "Ramachandran",
                      role = "cre",
                      email = "ramuigib@gmail.com"))
Maintainer: S. Ramachandran <ramuigib@gmail.com>
Description: Text mining of PubMed Abstracts (text and XML) from <https://pubmed.ncbi.nlm.nih.gov/>.
Depends: R (>= 3.5.0), methods
Imports: RCurl, XML, boot, R2HTML, RJSONIO
Collate: 'Abstracts-class.R' 'HGNC-class.R' 'Yearwise.R' 'Genewise.R'
        'combineabs.R' 'gene_atomization.R' 'Find_conclusion.R'
        'getabs.R' 'getabsT.R' 'gethgnc.R' 'ready.R' 'readabs.R'
        'removeabs.R' 'searchabsL.R' 'searchabsT.R' 'sendabs.R'
        'subabs.R' 'cleanabs.R' 'word_atomizations.R' 'SentenceToken.R'
        'contextSearch.R' 'uniprotfun.R' 'local_uniprotfun.R'
        'tdm_for_lsa.R' 'printabs.R' 'pubtator_function.R'
        'cos_sim_calc.R' 'cos_sim_calc_boot.R' 'wordscluster.R'
        'whichcluster.R' 'wordsclusterview.R' 'find_intro_conc_html.R'
        'cluster_words.R' 'get_original_term.R' 'get_original_term2.R'
        'input_for_find_intro_conc_html.R' 'xmlreadabs.R'
        'xmlword_atomizations.R' 'xmlgene_atomizations.R'
        'pubtator_result_list_to_table.R' 'genes_BWI.R' 'BWI.R'
        'currentabs_fn.R' 'previousabs_fn.R' 'altnamesfun.R'
        'subsetabs.R' 'prevsymbol_fn.R' 'alias_fn.R' 'get_NMids.R'
        'get_PMCIDS.R' 'get_PMCtable.R' 'get_Sequences.R'
        'Give_Sentences_PMC.R' 'head_abbrev.R' 'names_fn.R'
        'official_fn.R' 'pmids_to_abstracts.R' 'get_gene_sentences.R'
        'Give_Sentences.R' 'get_MedlinePlus.R' 'co_occurrence_fn.R'
        'space_quasher.R' 'readabsnew.R' 'word_associations.R'
        'get_DOIs.R' 'additional_info.R' 'new_xmlreadabs.R'
        'pubtator_function_JSON.R' 'xmlgene_atomizations_new.R'
        'co_occurrence_advance.R' 'pubtator3_function.R'
License: GPL-3
LazyLoad: true
LazyData: true
NeedsCompilation: no
Packaged: 2024-09-06 11:29:09 UTC; sramachandran
Author: Jyoti Rani [aut],
  S.Ramachandran [aut],
  Ab Rauf Shah [aut],
  S. Ramachandran [cre]
Repository: CRAN
Date/Publication: 2024-09-08 08:00:02 UTC
Built: R 4.4.3; ; 2025-12-29 17:21:42 UTC; windows
