# Computer Simulations of 'SNP' Data

## Documentation for package ‘dartR.sim’ version 0.71

- DESCRIPTION file.

## Help Pages

gl.diagnostics.sim | Comparing simulations against theoretical expectations
gl.report.nall | Report allelic retention and simulate a rarefaction curve
gl.sim.create_dispersal | Creates a dispersal file as input for the function gl.sim.WF.run
gl.sim.emigration | Simulates emigration between populations
gl.sim.ind | Simulates individuals based on allele frequencies
gl.sim.ind.af | Simulate diploid genotypes from per-population allele frequencies
gl.sim.mutate | Simulates mutations within a genlight object
gl.sim.Neconst | Simulate a population with constant mutation rate
gl.sim.offspring | Simulates offspring based on alleles provided by parents
gl.sim.WF.run | Runs Wright-Fisher simulations
gl.sim.WF.table | Creates the reference table for running gl.sim.WF.run
interactive_reference | Shiny app for the input of the reference table for the simulations
interactive_sim_run | Shiny app for the input of the simulations variables