* using log directory 'd:/Rcompile/CRANpkg/local/4.7/snplist.Rcheck'
* using R Under development (unstable) (2026-07-04 r90207 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* current time: 2026-07-05 20:25:31 UTC
* checking for file 'snplist/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'snplist' version '0.18.3'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'snplist' can be installed ... ERROR
Installation failed.
See 'd:/Rcompile/CRANpkg/local/4.7/snplist.Rcheck/00install.out' for details.
* DONE
The installation logfile:
* installing *source* package 'snplist' ...
** this is package 'snplist' version '0.18.3'
** package 'snplist' successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 14.3.0'
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_07_05_01_50_00_9020/RtmpKiLvLL/R.INSTALL71b058534017/snplist/src'
g++ -std=gnu++20  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.7/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c exportPLINKSet.cpp -o exportPLINKSet.o
gcc  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.7/Rcpp/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"      -pedantic -Wstrict-prototypes -O2 -Wall -std=gnu2x  -mfpmath=sse -msse2 -mstackrealign   -c init.c -o init.o
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
g++ -std=gnu++20 -shared -s -static-libgcc -o snplist.dll tmp.def exportPLINKSet.o init.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_07_05_01_50_00_9020/RtmpKiLvLL/R.INSTALL71b058534017/snplist/src'
make[1]: Entering directory '/d/temp/2026_07_05_01_50_00_9020/RtmpKiLvLL/R.INSTALL71b058534017/snplist/src'
'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'.
make[1]: Leaving directory '/d/temp/2026_07_05_01_50_00_9020/RtmpKiLvLL/R.INSTALL71b058534017/snplist/src'
installing to d:/Rcompile/CRANpkg/lib/4.7/00LOCK-snplist/00new/snplist/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for 'snplist' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
 there is no package called 'progress'
Error: loading failed
Execution halted
ERROR: loading failed
* removing 'd:/Rcompile/CRANpkg/lib/4.7/snplist'
* restoring previous 'd:/Rcompile/CRANpkg/lib/4.7/snplist'