4de9abce63c630c16bc1baa2258f5cfb *DESCRIPTION
3860a7ad7fabd1e3c0ca4f4d8baf2785 *LICENSE
98c43af0bb1ae8d3325da957fc83b6d3 *NAMESPACE
4d2bc25b00339a5a8877182ffca4ba64 *R/calcProbabilities.R
1fbf565f8bdcf613c25ae500d5e05e86 *R/calcR.R
f6ce27669257b98f797e0bfd4f5f772f *R/calcSI.R
c1fbd82d3c09fc27431fba48dbc94df5 *R/clusterInfectors.R
bf070d7a28d99ab70d70b7080c423718 *R/indData.R
1320b4de8928c7b346f5f80d146f1778 *R/indToPair.R
e2d0ddcb9ade13447d0bfe5e84fdbabe *R/nbResults.R
2d9ce0b5fb01f512788f60ac2db2838b *R/pairData.R
b4542f0a9a2127abdf51d8b00a9da29d *R/performNB.R
416a90678ffee12ff2fa298a7ccfd01e *R/visualizeResults.R
f7f55f9fe83bee8f3a54f75adbe5b230 *README.md
9b43fa927aa9d8767f1346bb1d1ccafd *build/vignette.rds
3ad37bd91ab933c315e5b1bcdb127938 *data/indData.rda
cf04d617ab0c079da796ca27c00b43d9 *data/nbResults.rda
ef9f37ff4aeaa1b8516c23c700848605 *data/pairData.rda
6fd8f7bfae5ee1f903069c0a50655192 *inst/CITATION
feb2fe32dd5107a59d18024955251cfa *inst/doc/adjusted-odds-ratio-example-vignette.R
f36dff19b4340b810282a62bfaa160c9 *inst/doc/adjusted-odds-ratio-example-vignette.Rmd
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9a1ee339acaf66a659dbee7f5698ab9f *inst/doc/nbTransmission-vignette.R
916f95ba10997943bc78acdccaf2b5dd *inst/doc/nbTransmission-vignette.Rmd
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fa6139669bdfdcb0cb2d68dbd83f6e8d *man/clusterInfectors.Rd
f59a8ec26e815f70b23a4e5999f9c70c *man/estimateR.Rd
6ea088be8ac5a8804d27afc8c9220398 *man/estimateRi.Rd
ed1024aef9e1d080a303d096b7286049 *man/estimateRt.Rd
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4339d98c9c3b8c1add9ed06b3e06c253 *man/estimateSI.Rd
13ce9e6d56dc6500651b15d9caec33c0 *man/indData.Rd
986c7e779dfb847b427d8cbc29a3c620 *man/indToPair.Rd
023c1e7cb421258464c94de2e71e4237 *man/nbHeatmap.Rd
86743db7885103f1d82adabfec4bd282 *man/nbNetwork.Rd
291e09716108fa1c01bc82a3f34650e9 *man/nbProbabilities.Rd
6e88cad6efb275966abc5c5670a768ec *man/nbResults.Rd
ff89eb65ac4a5db669099501a5eb15e1 *man/pairData.Rd
4711021baec2cf140d2c65b9fa445b63 *man/performNB.Rd
0d916bb0e77491aff44d91afc8aeefeb *man/performPEM.Rd
9182bcc5ed48c313f3f64d24ad9b60ca *man/plotRt.Rd
818a4cf86b3f7c1954ced7bc607d2407 *tests/testthat.R
acf9d27e85fe1b5a537cde1246fd77c2 *tests/testthat/test_calcProbabilities.R
ac16f9791b4986ec555a0d4f2cfe2e0e *tests/testthat/test_calcR.R
ffab143b5582eacf76037495e58e11fb *tests/testthat/test_calcSI.R
1779850f3a0753ac15ceb4694b17b788 *tests/testthat/test_clusterInfectors.R
5384966722ccc9e59548b915953343e8 *tests/testthat/test_indToPair.R
53a14197b1a08405ab48ffef0c71d06d *tests/testthat/test_visualizeResults.R
f36dff19b4340b810282a62bfaa160c9 *vignettes/adjusted-odds-ratio-example-vignette.Rmd
916f95ba10997943bc78acdccaf2b5dd *vignettes/nbTransmission-vignette.Rmd
